Lsi07G007510 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGTCCTTGTGCGTAGAACTTACAAGCAGTCCAACCAAATTCTACAGTTCCTTCTCTTCCTCGCTTCAATCGCGCTGTTGTTATTTTCAGGCATTCTAAAAATCCCTTTCCTTCTGGGGTTTGGAGATTCCGGGCGATTACTGCTCTTCTCTGTCATGTTTCCTCTGAGTTCTGTCCGATTCAAAGCCGGATTTCTATAATCACCGCTAAAATTTCCCTTCAAGCATTTCTCTACTCGGAATCCGAAACCCCATTTGTTGGTTCTTCAAATTTTCTCTCCTGCATCATCCATTTATCTGATAAGGGTTTCACATCAATTATGATTACAATCTTTAAGCCCTTTATGACCTTCATCGTAATCGTTCACAATCTTCGTGTCTTTGGTCCTGGATTGAATCCCTTTGCACCCTACTGCGTGGCTCATCATTCTTTTGCTGTTTCTCGCTAATTCTCTTTCTTTTCGGTTTTCCTTCCCAATCTTCCTTATCCATTTTAATTTTATTACTTTGTTGTTCCTCCTTTCAATCATGTAATTCTTGTGTCTTTTTGGGTTCTGGGTTTTCTTGCCATTAGAAACAAGTTGTGATTTTCTTGTCATAAAAGGGAGTTCTGTTTCTTGTTTTGTGATTTACGAACTGTTTTGAGCGAGGCTGTTTGAGTTGACTGAAGGGGAATTTAAGAACCAACATGCCTCAGGAACAGAGGAGCCCGTTTAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGATATGAAGTATTCAATACGGATGACAGGGGATGGACTTCACTCCACATTGGTGCGAGAAAGGGTGATCTTAAAGAGGTAGATTTTGTATAAGTTTCTACCATGCTGCTTTCTTAGTTGGATTGAATTGCTGTTTGTTTTTCCCTTTTCATTGCCTTTACAATTCTGTTGTCGTTAATTTTATTGGAAGGAGAATTGCATGAAATCATTGAAACTTGAAAGACTGATATACTAGTTCTGTTTAACATTCTAACATTCATTTGTGAGGATCAGATTGTTATACAAGGAAGGGATAAGGAGGGGAGGGTTTACTTCCACATAAATTTCACCCCCTTTTCCTTTTGTTGTTAATTGGCTTTGGAGGTTGGGTAGCATGTGTCAATTGCCCCAACAAAGGGATAAGGAGGGGAGGGTTTACTCCTTGGTTATTTTTAACGAGGAAACTCATGTTTACTAACCTCAACCTATGCAAGCCTCTCCCATCCTTTGATTCTTTTCTAGGAGTGTTGTCGTTTGGTAGTAGTTTATCGACATTTTGAGTTGTGACGTGTGAATCCACGTCGTGTTCTTTGTTTTGTTGTGTGCGTGTGTGTATGTTTTGTTTTGTTGGATGCAAAACCACTTCCATTAAGAAGAATAAAATATCGCAACAAAGGCCAACCATAAATATTGGTTCATGCAAAAAGGGAGCAACCCGAAGATAATAGGAAAGAGCTCTAACTATTGAAGATAAAAAAATTAAGAAGAATATGTCATAAAAGTTTAGCCTGGATGGTGCAAACAGAGATACTGGAAGAGAGGACTAAACCATTCTGTCTCAAAAAACCTCATGTTCCTTTTGAAGTATATTTTCCGTACAAATGGCTGGAAGGCTGGAACCATGCTTTTGAGTTAAACTTCCATTTGTTTCAGAAATAACTTCTTCCAAAACCTGGAAAGGGGATGCTGACTGAATAACTATGTTACTTTGTTCTCTTGTTTCTTTTACCCCCTTTTCTTCTCCCTCCTCTCCTTCTCCTGTAGTTAGACTGTTCTCTTTATACATATTGTCGTTCATGTTTTTTTCCAAGGTATCTCAACTTTTCTCCACTGGCTTTTCTTGTATTCCCCCTAAAAACTAAACAAATGGAAAAAAGAATGGTTATTTGTCTCCTGGTTGGTACTTAGCTGTTCTTTTGTTTTCTTTTCGAATATCATGGATTTCTTTTGCTCGTTTATTCGTTAGGTGATTGCTGTTGGTTTTATTCATTTATTCTTGACTTTTCTTTTGCAAATATGATGGCTTGAAGGTCTTATATCTCCCCTTCTTGATCAGGTGAAACGTTTGCTCAATGATGGAATGGATGTGAATGCAATAGCATGGGGTCCCAAATCAAAGGGGTTGACCCCCCTCCACCTTGCTGCCGAGGGTGGACATGTTGAAGTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGACGCTAGAACCAAAGGTGCTTGTGGCTGTAAGTATCTTTATCTCTTATGGATTCATTTCCCTTGGAATTGGCTAAATATAAACCTGGAATTGATTTTTATTCATATTTTGCTGAATGTCTCTTATTTTATTGTTATTGACGAATCAACTATTTGATATTACAGAAAAGAACCTCTTGGGGAGAGATCTCATTTAATTCAATTCATAAACAGTTTTGCTAACTTGTAGTACAAAATATGATTTGAGTAACCTATGCCCAGTAGAATGTTAGCTGTAGGAAAAAACAGGCATAACTTCGAAAACAAATACGGAGAACTTAAAACCATTATGGGTTGGCCTAGTGGTAAAATAAGGAGATGTAATCTCAATAAATGGCTAAGAGGTCATGCGTTCAATCGATGGTGGCCACCTACCTAGGAATTAATATCTTATGAGTTTTCCTTGATACCCAAATGTTGTAGGGTCAGGTGGGTTGTCCCGTGAGATTAGTTTAGGTGCGTGTAAGCTGGCCCGGACACCCACGGATATCAAAAAAAAAAAAAAAGGGAGAACTAACATGTGCTAAAATTCATAATCTTTGAGAATAGAACTTTGAGCAAGTAAAAGAAGGGATAAGGAAAGAAAAACTAGATTTAAGAGGGTGGCAAATGTGTGATAGGAATGTTCTTTTTCTCTGTAGGACTTGCCTCGAATGGAATGGAAATCCTCGATTAAGCAGGGAATGGGGAGTGAGGGGAAATTAATTTAGGGTGGGGAATTGTGTGTGCTTATGTTATGAAGAAAGATGAATAACCTTGCATATGGAGGCAATATAATATAGATCAATTTAAGGAAATTGCCTTAGCCCAAAATAGGGGAAACCAAAGTTCAGTCTTAGAAAGTCTCGAGGGTTTAGAAGATCGGTACCAAGTGTATAGGGATGACCTTGTGAAAACGAGGATCTTAACTCGAGGATAAAAGAGGTTTTTGAGTCTTTCAAGATATTGTGTGATATAGAAAGCACCGTACCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGTGATATATATATATATATATATATATATATATAATTAAAGATTGTTATGTTTGTGATTATAAGGGCCCGTTTGGATTAACTTAAAAGATAAATGTTCTTCAAAAATTTATTTTCATTTAAGCACTTTTGATTAGAACTCTCCAAAATAAAGACACTAATAGTTTTCAAAATCCATTTTGAGTGGTTGCCATATACTTTATTTATTTCAAAATGGCTTATTTTTTAAATTTAACACTTGAAAATGTATTCCAAACACACCCTAAGGTTTTATGGTTTAATGACTTATGAGATATTTGTATGGATGACTTGAAATGTTTGAAGCATTTTAAAGTCGTCCTATGCATGGATAATTAGATAGTTTGATATGAAATGTTGTTTTATTTCTATAAAGAGGTTTAAGATCTCTCTCTTTAAATTGGGATTTTTCATGATGAATTAACCATTATGGGAGTTAACTGTCTCGTTGAAAATTTTCTTAAAAAATAACTAAATGCAGATAAGTTCCCACAAGAAATCCCTGCAAAATTGGAAATTTGCAGAGATGGGTAATGAAATTGGGGATGGGGATGGGGACAAGGAAGCAATCTCCGTTGCCACCCCCTCCCACCTTCTGACCTCTTATTTCTCTCCTTCTTTCTATTCTGCCTCTTAATTTATTTATTTTGGGTAAATTATCATTTTGTTGCTCCTGTGCCACAGTCTTGGCTTTTGAATGACTAGCATAATTTTGTTGGTTATAACTTCATTTTTTTCCTCCTGCACCACGGCCTTGGTGTTATGTCCTGTAAATATTATGTGCCATGGTGCTGGGTTCTCTCTACATAGCATGTTCGAGGAGCAAGCAGGCTGGCACTGTGGACGTATAGACTGTAGGCATACGGTGGTGCTAGGCTTGTAAAACTCTTATATTTTCTTAAACAAAATGTAGATAAACCACCAGAATTTCTTGTACTGAAAGTACCTAAATATAATAGCAAATTGGATGGGTAAGAATATATAAAATGTTAAGGCCCTGTAAAGATCCTAAACATTCATTATGTTTACAATGAACCCCAGGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTTGTGGAGAATGGAGCGTTCTTGCCGGATGACATTAATGACTGCAGGTTTAATCCTCCACTCCACTACTGTCCCGGCCTCGAGTGGGCATACGAGGAGATGAAGCGTCTTCAACACGAAAATTGTTCATCTGGAGAGACATCTTGCAGCTCTGAGAGCTGAAAACCCATCCTCTCCACCCCTTGGTGGTGGTGTTGTTGAGTTTGATTCTGTTTTTTACAAAGACTATCTATCTTTTAAATCTTTGTGTGTGTTGGATCAGATATGCTTTTTTGTTCTGTGGAAACTACTTATTAAGTGTGTTGTCAAACCATAAACTGTGTTGTGTATTTGTAAACCTTTGCCAACCATGGATCAATCTGAATTGTCTCTTCTTAATCTTTGCTGCTCAACTAGAAGTCAAATTTTGC GGGTCCTTGTGCGTAGAACTTACAAGCAGTCCAACCAAATTCTACAGTTCCTTCTCTTCCTCGCTTCAATCGCGCTGTTGTTATTTTCAGGCATTCTAAAAATCCCTTTCCTTCTGGGGTTTGGAGATTCCGGGCGATTACTGCTCTTCTCTGTCATGTTTCCTCTGAGTTCTGTCCGATTCAAAGCCGGATTTCTATAATCACCGCTAAAATTTCCCTTCAAGCATTTCTCTACTCGGAATCCGAAACCCCATTTGTTGGTTCTTCAAATTTTCTCTCCTGCATCATCCATTTATCTGATAAGGGTTTCACATCAATTATGATTACAATCTTTAAGCCCTTTATGACCTTCATCGTAATCGTTCACAATCTTCGTGTCTTTGGTCCTGGATTGAATCCCTTTGCACCCTACTGCGTGGCTCATCATTCTTTTGCTGTTTCTCGCTAATTCTCTTTCTTTTCGGTTTTCCTTCCCAATCTTCCTTATCCATTTTAATTTTATTACTTTGTTGTTCCTCCTTTCAATCATGTAATTCTTGTGTCTTTTTGGGTTCTGGGTTTTCTTGCCATTAGAAACAAGTTGTGATTTTCTTGTCATAAAAGGGAGTTCTGTTTCTTGTTTTGTGATTTACGAACTGTTTTGAGCGAGGCTGTTTGAGTTGACTGAAGGGGAATTTAAGAACCAACATGCCTCAGGAACAGAGGAGCCCGTTTAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGATATGAAGTATTCAATACGGATGACAGGGGATGGACTTCACTCCACATTGGTGCGAGAAAGGGTGATCTTAAAGAGGTGAAACGTTTGCTCAATGATGGAATGGATGTGAATGCAATAGCATGGGGTCCCAAATCAAAGGGGTTGACCCCCCTCCACCTTGCTGCCGAGGGTGGACATGTTGAAGTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGACGCTAGAACCAAAGGTGCTTGTGGCTGGTCAGGTGGGTTGTCCCGTGAGATTAGTTTAGAAAGCACCGTACCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTTGTGGAGAATGGAGCGTTCTTGCCGGATGACATTAATGACTGCAGGTTTAATCCTCCACTCCACTACTGTCCCGGCCTCGAGTGGGCATACGAGGAGATGAAGCGTCTTCAACACGAAAATTGTTCATCTGGAGAGACATCTTGCAGCTCTGAGAGCTGAAAACCCATCCTCTCCACCCCTTGGTGGTGGTGTTGTTGAGTTTGATTCTGTTTTTTACAAAGACTATCTATCTTTTAAATCTTTGTGTGTGTTGGATCAGATATGCTTTTTTGTTCTGTGGAAACTACTTATTAAGTGTGTTGTCAAACCATAAACTGTGTTGTGTATTTGTAAACCTTTGCCAACCATGGATCAATCTGAATTGTCTCTTCTTAATCTTTGCTGCTCAACTAGAAGTCAAATTTTGC ATGCCTCAGGAACAGAGGAGCCCGTTTAGTCGAAGCCTTTCGAGAAGGCGTTCCTTCCGATATGAAGTATTCAATACGGATGACAGGGGATGGACTTCACTCCACATTGGTGCGAGAAAGGGTGATCTTAAAGAGGTGAAACGTTTGCTCAATGATGGAATGGATGTGAATGCAATAGCATGGGGTCCCAAATCAAAGGGGTTGACCCCCCTCCACCTTGCTGCCGAGGGTGGACATGTTGAAGTAATGGATGAATTGCTTGAACGTGGTGCCAACATTGACGCTAGAACCAAAGGTGCTTGTGGCTGGTCAGGTGGGTTGTCCCGTGAGATTAGTTTAGAAAGCACCGTACCCGAAAGGATACAAAAATATCTGAAGGAGCATGGTGACCCCAAGGAGTACGACATTGAGGAACTAGGGACACCTCTGCACAGTGCAGCCAAAGAGAGAAGGAAGGAAGCTGTGAAGTTCCTTGTGGAGAATGGAGCGTTCTTGCCGGATGACATTAATGACTGCAGGTTTAATCCTCCACTCCACTACTGTCCCGGCCTCGAGTGGGCATACGAGGAGATGAAGCGTCTTCAACACGAAAATTGTTCATCTGGAGAGACATCTTGCAGCTCTGAGAGCTGA MPQEQRSPFSRSLSRRRSFRYEVFNTDDRGWTSLHIGARKGDLKEVKRLLNDGMDVNAIAWGPKSKGLTPLHLAAEGGHVEVMDELLERGANIDARTKGACGWSGGLSREISLESTVPERIQKYLKEHGDPKEYDIEELGTPLHSAAKERRKEAVKFLVENGAFLPDDINDCRFNPPLHYCPGLEWAYEEMKRLQHENCSSGETSCSSES Homology
BLAST of Lsi07G007510 vs. ExPASy Swiss-Prot
Match: Q9FNP4 (Phytochrome-interacting ankyrin-repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=PIA2 PE=1 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 8.8e-60 Identity = 126/214 (58.88%), Postives = 145/214 (67.76%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy Swiss-Prot
Match: Q9FF09 (Phytochrome-interacting ankyrin-repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=PIA1 PE=2 SV=1) HSP 1 Score: 221.5 bits (563), Expect = 9.1e-57 Identity = 115/195 (58.97%), Postives = 132/195 (67.69%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy Swiss-Prot
Match: G5E8K5 (Ankyrin-3 OS=Mus musculus OX=10090 GN=Ank3 PE=1 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12 Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy Swiss-Prot
Match: O70511 (Ankyrin-3 OS=Rattus norvegicus OX=10116 GN=Ank3 PE=1 SV=3) HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12 Identity = 48/126 (38.10%), Postives = 69/126 (54.76%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy Swiss-Prot
Match: Q12955 (Ankyrin-3 OS=Homo sapiens OX=9606 GN=ANK3 PE=1 SV=3) HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12 Identity = 55/162 (33.95%), Postives = 82/162 (50.62%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy TrEMBL
Match: A0A1S3BSK3 (ankyrin-3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 5.5e-89 Identity = 167/210 (79.52%), Postives = 170/210 (80.95%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy TrEMBL
Match: A0A1S4DYZ9 (ankyrin-1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493066 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 5.5e-89 Identity = 167/210 (79.52%), Postives = 170/210 (80.95%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy TrEMBL
Match: A0A0A0KV64 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G055330 PE=4 SV=1) HSP 1 Score: 333.2 bits (853), Expect = 8.0e-88 Identity = 166/210 (79.05%), Postives = 169/210 (80.48%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy TrEMBL
Match: A0A6J1C4B1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008250 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.3e-87 Identity = 166/210 (79.05%), Postives = 169/210 (80.48%), Query Frame = 0
BLAST of Lsi07G007510 vs. ExPASy TrEMBL
Match: A0A6J1C3V9 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008250 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.3e-87 Identity = 166/210 (79.05%), Postives = 169/210 (80.48%), Query Frame = 0
BLAST of Lsi07G007510 vs. NCBI nr
Match: XP_038902361.1 (phytochrome-interacting ankyrin-repeat protein 2-like [Benincasa hispida]) HSP 1 Score: 337.4 bits (864), Expect = 8.7e-89 Identity = 169/210 (80.48%), Postives = 170/210 (80.95%), Query Frame = 0
BLAST of Lsi07G007510 vs. NCBI nr
Match: XP_008451912.1 (PREDICTED: ankyrin-3-like isoform X1 [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88 Identity = 167/210 (79.52%), Postives = 170/210 (80.95%), Query Frame = 0
BLAST of Lsi07G007510 vs. NCBI nr
Match: XP_016901198.1 (PREDICTED: ankyrin-1-like isoform X2 [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 1.1e-88 Identity = 167/210 (79.52%), Postives = 170/210 (80.95%), Query Frame = 0
BLAST of Lsi07G007510 vs. NCBI nr
Match: XP_004148983.1 (phytochrome-interacting ankyrin-repeat protein 2 [Cucumis sativus] >KGN53438.1 hypothetical protein Csa_015365 [Cucumis sativus]) HSP 1 Score: 333.2 bits (853), Expect = 1.6e-87 Identity = 166/210 (79.05%), Postives = 169/210 (80.48%), Query Frame = 0
BLAST of Lsi07G007510 vs. NCBI nr
Match: XP_022136575.1 (phytochrome-interacting ankyrin-repeat protein 2-like isoform X1 [Momordica charantia]) HSP 1 Score: 331.6 bits (849), Expect = 4.8e-87 Identity = 166/210 (79.05%), Postives = 169/210 (80.48%), Query Frame = 0
BLAST of Lsi07G007510 vs. TAIR 10
Match: AT5G61230.1 (Ankyrin repeat family protein ) HSP 1 Score: 231.5 bits (589), Expect = 6.3e-61 Identity = 126/214 (58.88%), Postives = 145/214 (67.76%), Query Frame = 0
BLAST of Lsi07G007510 vs. TAIR 10
Match: AT5G07840.1 (Ankyrin repeat family protein ) HSP 1 Score: 221.5 bits (563), Expect = 6.5e-58 Identity = 115/195 (58.97%), Postives = 132/195 (67.69%), Query Frame = 0
BLAST of Lsi07G007510 vs. TAIR 10
Match: AT3G04710.1 (ankyrin repeat family protein ) HSP 1 Score: 61.6 bits (148), Expect = 8.6e-10 Identity = 44/139 (31.65%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Lsi07G007510 vs. TAIR 10
Match: AT3G04710.2 (ankyrin repeat family protein ) HSP 1 Score: 61.6 bits (148), Expect = 8.6e-10 Identity = 44/139 (31.65%), Postives = 66/139 (47.48%), Query Frame = 0
BLAST of Lsi07G007510 vs. TAIR 10
Match: AT3G04710.3 (ankyrin repeat family protein ) HSP 1 Score: 61.6 bits (148), Expect = 8.6e-10 Identity = 44/139 (31.65%), Postives = 66/139 (47.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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