Lsi07G005170 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi07G005170
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Avr9/Cf-9 rapidly elicited protein
Location	chr07: 5444131 .. 5444655 (-)
RNA-Seq Expression	Lsi07G005170
Synteny	Lsi07G005170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATCTCACAAATCTCATCTCTAAACGCGGCAAGCTCACCGGAAAAGCCTTGAAGAATCTCATGTTCCACCACCACGACGGCGCCTCTGGTGGTGCCTTCTCCCTCGCCCCTTTCCGCCGCAACCACCACCTCGATCCCGCCGCTGCTGCCGGTCACTACGAATTTAGCTGCACCAACACTCCTGCTTTTCCTAGATTTCATTACACCTTCAACAAACGCCGCCATTTTTTCGCGTGTGCTCACGCGCCTAATACGCTTGACGATGACGTGGCCGCCATGAACGCTTTCAAGGCCGTTTGGGAGGCTCTCAACAATAATAATGACGTGGCGGTTGATGTGGCATCCCCGGCGTTACCTGGGTTTGGCCGAAGCCCGATGCTGGTTAGGCAGCTGAGAGTCACCGACTCGCCGTTTCCGGTGGCTGGAGGTGGCGATGAGGACTGCCACGTGGATAAAGCGGCGGAGGAATTTATTAATCGGTTTTATAAGGAACTGCGGTTGCAGAAGACGGCGGAGTAA

mRNA sequence

ATGGCCGATCTCACAAATCTCATCTCTAAACGCGGCAAGCTCACCGGAAAAGCCTTGAAGAATCTCATGTTCCACCACCACGACGGCGCCTCTGGTGGTGCCTTCTCCCTCGCCCCTTTCCGCCGCAACCACCACCTCGATCCCGCCGCTGCTGCCGGTCACTACGAATTTAGCTGCACCAACACTCCTGCTTTTCCTAGATTTCATTACACCTTCAACAAACGCCGCCATTTTTTCGCGTGTGCTCACGCGCCTAATACGCTTGACGATGACGTGGCCGCCATGAACGCTTTCAAGGCCGTTTGGGAGGCTCTCAACAATAATAATGACGTGGCGGTTGATGTGGCATCCCCGGCGTTACCTGGGTTTGGCCGAAGCCCGATGCTGGTTAGGCAGCTGAGAGTCACCGACTCGCCGTTTCCGGTGGCTGGAGGTGGCGATGAGGACTGCCACGTGGATAAAGCGGCGGAGGAATTTATTAATCGGTTTTATAAGGAACTGCGGTTGCAGAAGACGGCGGAGTAA

Coding sequence (CDS)

ATGGCCGATCTCACAAATCTCATCTCTAAACGCGGCAAGCTCACCGGAAAAGCCTTGAAGAATCTCATGTTCCACCACCACGACGGCGCCTCTGGTGGTGCCTTCTCCCTCGCCCCTTTCCGCCGCAACCACCACCTCGATCCCGCCGCTGCTGCCGGTCACTACGAATTTAGCTGCACCAACACTCCTGCTTTTCCTAGATTTCATTACACCTTCAACAAACGCCGCCATTTTTTCGCGTGTGCTCACGCGCCTAATACGCTTGACGATGACGTGGCCGCCATGAACGCTTTCAAGGCCGTTTGGGAGGCTCTCAACAATAATAATGACGTGGCGGTTGATGTGGCATCCCCGGCGTTACCTGGGTTTGGCCGAAGCCCGATGCTGGTTAGGCAGCTGAGAGTCACCGACTCGCCGTTTCCGGTGGCTGGAGGTGGCGATGAGGACTGCCACGTGGATAAAGCGGCGGAGGAATTTATTAATCGGTTTTATAAGGAACTGCGGTTGCAGAAGACGGCGGAGTAA

Protein sequence

MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCTNTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPALPGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE

Homology

[Close]

BLAST of Lsi07G005170 vs. ExPASy TrEMBL
Match: A0A0A0LBN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G462680 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.2e-89
Identity = 163/174 (93.68%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCT 60
           M DLTNLISKR KLTGKALKNLMFHHHDG SG AFSLAPFRRNH+LD AAAA HYEFSCT
Sbjct: 33  MVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRRNHNLDLAAAASHYEFSCT 92

Query: 61  NTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPAL 120
           NTPAFP FHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVA +VASPAL
Sbjct: 93  NTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAAEVASPAL 152

Query: 121 PGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           PGFGRSPM+VRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE
Sbjct: 153 PGFGRSPMVVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 206

[Close]

BLAST of Lsi07G005170 vs. ExPASy TrEMBL
Match: A0A5A7U4P4 (Avr9/Cf-9 rapidly elicited protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00700 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHH-LDPAAAAGHYEFSC 60
           M DLTNLISKR KLTGKALKNLMFHHHDG SG AFSLAPFRRNHH LD AAAAGHYEFSC
Sbjct: 33  MVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRRNHHGLDLAAAAGHYEFSC 92

Query: 61  TNTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEAL-NNNNDVAVDVASP 120
           TNTPAFP FHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEAL NNNND+A +VASP
Sbjct: 93  TNTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNNDMAAEVASP 152

Query: 121 ALPGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           ALPGFGRSPM VRQLRVTDSPFPVAGG DEDCHVDKAAEEFINRFYKELRLQKTAE
Sbjct: 153 ALPGFGRSPMFVRQLRVTDSPFPVAGGADEDCHVDKAAEEFINRFYKELRLQKTAE 208

[Close]

BLAST of Lsi07G005170 vs. ExPASy TrEMBL
Match: A0A1S4DWM0 (uncharacterized protein LOC103490087 OS=Cucumis melo OX=3656 GN=LOC103490087 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.3e-87
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHH-LDPAAAAGHYEFSC 60
           M DLTNLISKR KLTGKALKNLMFHHHDG SG AFSLAPFRRNHH LD AAAAGHYEFSC
Sbjct: 33  MVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRRNHHGLDLAAAAGHYEFSC 92

Query: 61  TNTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEAL-NNNNDVAVDVASP 120
           TNTPAFP FHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEAL NNNND+A +VASP
Sbjct: 93  TNTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNNDMAAEVASP 152

Query: 121 ALPGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           ALPGFGRSPM VRQLRVTDSPFPVAGG DEDCHVDKAAEEFINRFYKELRLQKTAE
Sbjct: 153 ALPGFGRSPMFVRQLRVTDSPFPVAGGADEDCHVDKAAEEFINRFYKELRLQKTAE 208

[Close]

BLAST of Lsi07G005170 vs. ExPASy TrEMBL
Match: A0A6J1GV04 (uncharacterized protein LOC111457776 OS=Cucurbita moschata OX=3662 GN=LOC111457776 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.4e-76
Identity = 147/174 (84.48%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCT 60
           MADLTNL+SKR K+TGKALKNLMFHHHD AS  AFSL PFRRN HL     AGHYEFSCT
Sbjct: 33  MADLTNLMSKRRKITGKALKNLMFHHHDAAS-SAFSLTPFRRNRHL---PTAGHYEFSCT 92

Query: 61  NTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPAL 120
           N+PAFP FH TFNKRRHFFACAHAPNTLDDDVAAMNAFKAV EAL  NNDVAVDVASPAL
Sbjct: 93  NSPAFPTFHSTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVLEAL--NNDVAVDVASPAL 152

Query: 121 PGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           PGFG+SPM+ RQLRVTDSPFPV+GGGDEDCHVD+AAEEFINRFY +LRLQ TAE
Sbjct: 153 PGFGKSPMVTRQLRVTDSPFPVSGGGDEDCHVDQAAEEFINRFYNQLRLQTTAE 200

[Close]

BLAST of Lsi07G005170 vs. ExPASy TrEMBL
Match: A0A6J1IR97 (uncharacterized protein LOC111479283 OS=Cucurbita maxima OX=3661 GN=LOC111479283 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.1e-74
Identity = 144/175 (82.29%), Postives = 153/175 (87.43%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMF-HHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSC 60
           MADLTN++SKR K+TGKALKNLMF HHH  A+  AFSL PFRRN HL     AGHYEFSC
Sbjct: 33  MADLTNIMSKRRKITGKALKNLMFHHHHHHAASAAFSLTPFRRNRHL---PTAGHYEFSC 92

Query: 61  TNTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPA 120
           TN+PAFP FH+TFNKRRHFFACAHAPNTLDDD AAMNAFKAV EAL  NNDVAVDVASPA
Sbjct: 93  TNSPAFPAFHFTFNKRRHFFACAHAPNTLDDDAAAMNAFKAVLEAL--NNDVAVDVASPA 152

Query: 121 LPGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           LPGFGRSPM+ RQLRVTDSPFPV+GGGDED HVD+AAEEFINRFY ELRLQ TAE
Sbjct: 153 LPGFGRSPMVARQLRVTDSPFPVSGGGDEDFHVDQAAEEFINRFYNELRLQTTAE 202

[Close]

BLAST of Lsi07G005170 vs. NCBI nr
Match: XP_011651489.1 (uncharacterized protein LOC105434903 [Cucumis sativus] >KGN58047.1 hypothetical protein Csa_011780 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 2.5e-89
Identity = 163/174 (93.68%), Postives = 166/174 (95.40%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCT 60
           M DLTNLISKR KLTGKALKNLMFHHHDG SG AFSLAPFRRNH+LD AAAA HYEFSCT
Sbjct: 33  MVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRRNHNLDLAAAASHYEFSCT 92

Query: 61  NTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPAL 120
           NTPAFP FHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVA +VASPAL
Sbjct: 93  NTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAAEVASPAL 152

Query: 121 PGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           PGFGRSPM+VRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE
Sbjct: 153 PGFGRSPMVVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 206

[Close]

BLAST of Lsi07G005170 vs. NCBI nr
Match: XP_016900382.1 (PREDICTED: uncharacterized protein LOC103490087 [Cucumis melo] >KAA0050813.1 Avr9/Cf-9 rapidly elicited protein [Cucumis melo var. makuwa] >TYK08532.1 Avr9/Cf-9 rapidly elicited protein [Cucumis melo var. makuwa])

HSP 1 Score: 330.9 bits (847), Expect = 6.8e-87
Identity = 163/176 (92.61%), Postives = 165/176 (93.75%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHH-LDPAAAAGHYEFSC 60
           M DLTNLISKR KLTGKALKNLMFHHHDG SG AFSLAPFRRNHH LD AAAAGHYEFSC
Sbjct: 33  MVDLTNLISKRRKLTGKALKNLMFHHHDGVSGLAFSLAPFRRNHHGLDLAAAAGHYEFSC 92

Query: 61  TNTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEAL-NNNNDVAVDVASP 120
           TNTPAFP FHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEAL NNNND+A +VASP
Sbjct: 93  TNTPAFPSFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNNDMAAEVASP 152

Query: 121 ALPGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           ALPGFGRSPM VRQLRVTDSPFPVAGG DEDCHVDKAAEEFINRFYKELRLQKTAE
Sbjct: 153 ALPGFGRSPMFVRQLRVTDSPFPVAGGADEDCHVDKAAEEFINRFYKELRLQKTAE 208

[Close]

BLAST of Lsi07G005170 vs. NCBI nr
Match: XP_038902794.1 (uncharacterized protein LOC120089410 [Benincasa hispida])

HSP 1 Score: 327.8 bits (839), Expect = 5.7e-86
Identity = 159/175 (90.86%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHH-HDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSC 60
           M DLTNLISKR KLTGKALKNL+FHH HDG SGGAFSLAPFRRN HLD  AAAGHYEFSC
Sbjct: 33  MVDLTNLISKRRKLTGKALKNLIFHHGHDGISGGAFSLAPFRRNQHLDLTAAAGHYEFSC 92

Query: 61  TNTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPA 120
           TNTPAFP FHY FNKRRHFFACAH PNTLDDDVAA+NAFKAVWEALNNNNDVAV VASP+
Sbjct: 93  TNTPAFPSFHYAFNKRRHFFACAHPPNTLDDDVAAVNAFKAVWEALNNNNDVAVGVASPS 152

Query: 121 LPGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           LPGFGRSPMLVRQLRVTDSPFP+AGG DEDCHVDKAAEEFINRFYKELRLQKTAE
Sbjct: 153 LPGFGRSPMLVRQLRVTDSPFPLAGGDDEDCHVDKAAEEFINRFYKELRLQKTAE 207

[Close]

BLAST of Lsi07G005170 vs. NCBI nr
Match: XP_022955942.1 (uncharacterized protein LOC111457776 [Cucurbita moschata])

HSP 1 Score: 294.3 bits (752), Expect = 7.0e-76
Identity = 147/174 (84.48%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCT 60
           MADLTNL+SKR K+TGKALKNLMFHHHD AS  AFSL PFRRN HL     AGHYEFSCT
Sbjct: 33  MADLTNLMSKRRKITGKALKNLMFHHHDAAS-SAFSLTPFRRNRHL---PTAGHYEFSCT 92

Query: 61  NTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPAL 120
           N+PAFP FH TFNKRRHFFACAHAPNTLDDDVAAMNAFKAV EAL  NNDVAVDVASPAL
Sbjct: 93  NSPAFPTFHSTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVLEAL--NNDVAVDVASPAL 152

Query: 121 PGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           PGFG+SPM+ RQLRVTDSPFPV+GGGDEDCHVD+AAEEFINRFY +LRLQ TAE
Sbjct: 153 PGFGKSPMVTRQLRVTDSPFPVSGGGDEDCHVDQAAEEFINRFYNQLRLQTTAE 200

[Close]

BLAST of Lsi07G005170 vs. NCBI nr
Match: KAG6581884.1 (hypothetical protein SDJN03_21886, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.7 bits (748), Expect = 2.0e-75
Identity = 144/174 (82.76%), Postives = 154/174 (88.51%), Query Frame = 0


Query: 1   MADLTNLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCT 60
           MADLTNL+SKR K+TGKALKNLMFHHH  A+  AFSL PFRR+ HL   A AGHYEFSCT
Sbjct: 33  MADLTNLMSKRRKITGKALKNLMFHHHHHAASAAFSLTPFRRDRHL---ATAGHYEFSCT 92

Query: 61  NTPAFPRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPAL 120
           N+PAFP FH TFNKRRHFFACAHAPNTLDDDVAAMNAFKAV EAL  NNDVAVDVASP L
Sbjct: 93  NSPAFPTFHSTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVLEAL--NNDVAVDVASPVL 152

Query: 121 PGFGRSPMLVRQLRVTDSPFPVAGGGDEDCHVDKAAEEFINRFYKELRLQKTAE 175
           PGFG+SPM+ RQLRVTDSPFPV+GGGDEDCHVD+AAEEFINRFY +LRLQ TAE
Sbjct: 153 PGFGKSPMVARQLRVTDSPFPVSGGGDEDCHVDQAAEEFINRFYNQLRLQTTAE 201

[Close]

BLAST of Lsi07G005170 vs. TAIR 10
Match: AT3G16330.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.9 bits (276), Expect = 1.0e-24
Identity = 76/175 (43.43%), Postives = 90/175 (51.43%), Query Frame = 0


Query: 15  TGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCTNTP--AFPRFHYTF 74
           T K  KNLMFH+     G A +  P               YEFSC++TP   FP     F
Sbjct: 38  TLKRGKNLMFHNRRRVPGSAVASHP------------QNEYEFSCSDTPNYTFPFNMAAF 97

Query: 75  NKRRH---FFACAHAPNTLDDDVAAMNAFKAVWEALNNNND------------VAVDVAS 134
            K+ H    F+C  AP TLDDD +     +AV E LN+  D             A+   S
Sbjct: 98  KKKSHHNSLFSCGQAPPTLDDDTSVS---RAVLELLNSGGDHDQGSNTPAFSIEALTALS 157

Query: 135 PALPGFGRSPMLVRQLRVTDSPFPVAGGGD-EDCHVDKAAEEFINRFYKELRLQK 172
           P LPGFGRS   VR LRVTDSPFP+   GD  + HVDKAA+EFI +FYK L  QK
Sbjct: 158 PYLPGFGRSTSSVRPLRVTDSPFPLREEGDVANGHVDKAADEFIKKFYKNLYQQK 197

[Close]

BLAST of Lsi07G005170 vs. TAIR 10
Match: AT1G52140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16330.1); Has 114 Blast hits to 114 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 8.7e-24
Identity = 76/171 (44.44%), Postives = 94/171 (54.97%), Query Frame = 0


Query: 15  TGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCTNTP--AFPRFHYTF 74
           T K  KNLMFH       G  S A    N     A++   YEFSC+NTP  +FP  +  F
Sbjct: 38  TLKRGKNLMFHQRRRVHAG--STASAALNATSATASSRQEYEFSCSNTPNYSFPFSNMAF 97

Query: 75  NKRR---HFFACAHAPNTLDDDVAAMNAFKAVWEALN----NNNDVAVDVA---SPALPG 134
            +++   + F C   P TLDDDVAA    +AV E LN      N    D+    SP  PG
Sbjct: 98  MRKKSHNNLFTCGQTPQTLDDDVAAA---RAVLELLNGVGEKGNVTPADLTVALSPYFPG 157

Query: 135 FGRSPMLVRQLRVTDSPFPVA--GGGDEDCHVDKAAEEFINRFYKELRLQK 172
           FG++P LVR LRVTDSPFP+    G   + HVDKAA++FI +FYK L  QK
Sbjct: 158 FGQTP-LVRPLRVTDSPFPLTPENGDVANGHVDKAADDFIKKFYKNLNQQK 202

[Close]

BLAST of Lsi07G005170 vs. TAIR 10
Match: AT4G29110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to chitin; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52140.1); Has 109 Blast hits to 109 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 43/83 (51.81%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 89  DDDVAAMNAFKAVWEALNNNNDVAVDVASPALPGFGRSPMLVRQLRVTDSPFPVAGGGDE 148
           +++ A   A K V+E L  N+   V   S        SP  VRQLRVTDSPFP+  GGD 
Sbjct: 103 NEEDAVEAAVKKVFELLGENDKKTVATESARESPLIMSP-AVRQLRVTDSPFPLDDGGDH 162

Query: 149 DCHVDKAAEEFINRFYKELRLQK 172
           D  VDKAAEEFI +FYK L+LQK
Sbjct: 163 DHVVDKAAEEFIKKFYKNLKLQK 184

[Close]

BLAST of Lsi07G005170 vs. TAIR 10
Match: AT4G32860.1 (unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 5.6e-07
Identity = 48/169 (28.40%), Postives = 69/169 (40.83%), Query Frame = 0


Query: 6   NLISKRGKLTGKALKNLMFHHHDGASGGAFSLAPFRRNHHLDPAAAAGHYEFSCTNTPAF 65
           +L++KRGK+  K+L   +   H   +          R+  + P      YEFSC++TP  
Sbjct: 47  HLLAKRGKILRKSLNEAVSTSHSRITCRPSDHQDV-RSSFISPVPLQLEYEFSCSSTPPR 106

Query: 66  PRFHYTFNKRRHFFACAHAPNTLDDDVAAMNAFKAVWEALNNNNDVAVDVASPALPGFGR 125
             +  T +K R      + P                   L N       +    LP    
Sbjct: 107 RSYATTVSKGRRSNGSHNRP-------------------LINKRQRQAYIRYNTLPKVRD 166

Query: 126 SPMLVRQLRVTDSPFP---VAGGGDEDCHVDKAAEEFINRFYKELRLQK 172
           S   +    V  + FP    + G  E CHVD+AAEEFI  FY++LRLQK
Sbjct: 167 S---IWDRHVAAAVFPDVASSTGTMESCHVDRAAEEFIQSFYRQLRLQK 192

The following BLAST results are available for this feature:

BLAST of Lsi07G005170 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi07G005170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBN4	1.2e-89	93.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G462680 PE=4 SV=1	[more]
A0A5A7U4P4	3.3e-87	92.61	Avr9/Cf-9 rapidly elicited protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S4DWM0	3.3e-87	92.61	uncharacterized protein LOC103490087 OS=Cucumis melo OX=3656 GN=LOC103490087 PE=...	[more]
A0A6J1GV04	3.4e-76	84.48	uncharacterized protein LOC111457776 OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]
A0A6J1IR97	4.1e-74	82.29	uncharacterized protein LOC111479283 OS=Cucurbita maxima OX=3661 GN=LOC111479283...	[more]

BLAST of Lsi07G005170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651489.1	2.5e-89	93.68	uncharacterized protein LOC105434903 [Cucumis sativus] >KGN58047.1 hypothetical ...	[more]
XP_016900382.1	6.8e-87	92.61	PREDICTED: uncharacterized protein LOC103490087 [Cucumis melo] >KAA0050813.1 Avr...	[more]
XP_038902794.1	5.7e-86	90.86	uncharacterized protein LOC120089410 [Benincasa hispida]	[more]
XP_022955942.1	7.0e-76	84.48	uncharacterized protein LOC111457776 [Cucurbita moschata]	[more]
KAG6581884.1	2.0e-75	82.76	hypothetical protein SDJN03_21886, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lsi07G005170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16330.1	1.0e-24	43.43	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G52140.1	8.7e-24	44.44	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G29110.1	1.4e-13	51.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT4G32860.1	5.6e-07	28.40	unknown protein; Has 46 Blast hits to 46 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008480	Protein of unknown function DUF761, plant	PFAM	PF05553	DUF761	coord: 151..171 e-value: 9.6E-9 score: 34.7
None	No IPR available	PANTHER	PTHR33265:SF26	AVR9/CF-9 RAPIDLY ELICITED PROTEIN	coord: 1..172
None	No IPR available	PANTHER	PTHR33265	AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G005170.1	Lsi07G005170.1	mRNA