Lsi07G003140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi07G003140
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionOrganellar oligopeptidase A
Locationchr07: 3337431 .. 3339710 (-)
RNA-Seq ExpressionLsi07G003140
SyntenyLsi07G003140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATTTTATGTTTGTCTCATGGTAGCTTGCTCCATTTCCCTTATGGAATTTTCCCCAAGTTTTTGGACATGTACTTCCACTTTGGTCAAGGCCGCCACTTAACCCTAAGACAGATCAAAGACGAGTGGGGAACCTCGCAGGTTATTTAAGGAAGAGATCGATGATCCAAAGTTCTTTTACTCTATGCAGAATGTCCTTTTTGTTAGACGACTCTTAGGAGGGGAGAAGGGCCCTTACTAAGTTGTTTCAGTGTTTACTGTAATCAGAAAAGAAAATCTAAATGGGACCCTTGCTCGGTGTTACTCTAATGTAATCAACTCCTAGAAAAGTTACTTCTTGCTTCTATTGTAACAAAAGATTCCCTTATTATATGGAAAAGACTTGTATCCTTAATTATTATTTTACATATGGGCTTCCGTTAGAATGTACTAGAAAAAAGTACCACTAGTTGGCATCCTTCCTACCTTAAGTTGTATGCCTTTAAATTAAAGCTTGCCACATGTTTCTCAAAAAAAATCAATGTTAATTCAAGACATTTTCATTTGGTCGGACACATGGGTGAAGGTTGCAAAATAGTCCCTTGTCATATGGACAATCTTAGTTCAAGAGTGGCTGACTTGTTTGTAGGCAAGAGCAAGTGTGGCACAATCGCTTCATGAATCTCATTAAAGTGAGCACACTTGATTAGTTTTTTTATACATTATTTTTATCACAAAAGAGAAATTTTATAATATTGCTGTATAGTGTTGGAATGCTTGGGACTCTTTTTTCCGATCTGATATTTTCTCCCTTTAAATCTTACTTAACAATCTTATGTATTGCAGTGGGCGGAGGTTTTATCTGCTGATGCCTTTTCTGCATTTGAGGATGCTGGGTTGAATGATATCAAGGTATGTTTGGATGAGGTGGTCATTGACCGTGTTCTTGAATTTGTTGTTTACTTCTTGAATATCCTATCTACGTCGGGCTTGTCTTCATTGAGATTGGTTAAACGCTTTACTTCAACATCTACTATAGTCTTAGAGCTTGAGATTGCCATGTGGCATTGTGTGGACACTATTGTGTAGCACGCCTGATTAAACTAGCAAATGAGTCAACTTCAATCGTCGCATGCCTACCTAGCTTTTTTAGGGCATAAGCGCAGTGCTTGTACCTCGATTAACTTTTCCTTTTTATTTGCACATGTGTTTATTCTTTTTCTTTCATCCATAGGCTGTAAAGGAAACTGGGCATAGATTCCGAGAGACCGTTCTTGCTCTTGGAGGTGGAAGAGCTCCATCAGAGGTTAGACAGTTGAATTTCATTTTCTGTACAAGTAATCATTATTGAAGTTTGCCATCTATTTCTGTACTCTTTCGTTTTTCTAATCGTAAGTTTTGTTGATGATGAAATGTTGACGAAGTAATGGAATATCATAGAAATTTGGCAGAAATTGTCAGAATTGATATTTATATGTTTTGTTAATTAGAAAGAGTTTATATTTATATGATAGATACAAACTCATCTTAGTTTTGATTTAAGGATCATTTGGATTGACTTGAGAAAAAAGTGTTTTTCAAAAAAATCATTTTTATTTAAACTCTTTTGATAAGAACGGTTTAAAATACACTTCAAAATCTATTTTGAGTGGTTGTCAAACACTCTAATTTTTTCCAAAATGACTTATTTTCCAAATTAAACACTTGAAAATATATTCCAAAGACACTCTTAATATGTTCTTTAACTCCTAACAAACATTTTTCATAAATCACAGTTGAAGAAAGGGGAAGTTAAAGATGTGGTCAATGTTGACTAACTGAAGGGTGTGTTTTGTAGGTTTTTGTTGAATTTCGAGGGCGAGAACCTTCACCAGAACCACTGCTCCGGCACAGTGGCCTTTTGCCTGGCATAGCGACGGCATGATTTTCATGTTTGATGTTACTGCCTCCGCTTTTCATTGAATACTGCTGTACCAATAATTGATACTTTCATTCCCTTCTTGGCCAATTCTTATTTTATTTTCTCAGATCAAAGAAACATGGTTGCTAGTCCACAGTTATTATTATTATTATTATTATCCTTTTGAGATAATATTTATTTCAAGTTATCCCATTCCATTTCATATGCATTTGATAATTCTCATTAAAACAAAATTAGTTTTTGCCTCGTTTGAGAAAGTTAGATGCAACTTTCAAAAATTTTTAGAGGTGTTCGGGGCCTAAAGTTGAGTTGGGTGTTTGGATCTCCTATTATCATAGTTTGAATATTATCATTATTTTAATCCACATACTTAAGTA

mRNA sequence

ATGAAGATTTTATGTTTGTCTCATGGTAGCTTGCTCCATTTCCCTTATGGAATTTTCCCCAAGTTTTTGGACATGTACTTCCACTTTGGTCAAGGCCGCCACTTAACCCTAAGACAGATCAAAGACGAGTGGGGAACCTCGCAGTGGGCGGAGGTTTTATCTGCTGATGCCTTTTCTGCATTTGAGGATGCTGGGTTGAATGATATCAAGGCTGTAAAGGAAACTGGGCATAGATTCCGAGAGACCGTTCTTGCTCTTGGAGGTGGAAGAGCTCCATCAGAGGTTTTTGTTGAATTTCGAGGGCGAGAACCTTCACCAGAACCACTGCTCCGGCACAGTGGCCTTTTGCCTGGCATAGCGACGGCATGATTTTCATGTTTGATGTTACTGCCTCCGCTTTTCATTGAATACTGCTGTACCAATAATTGATACTTTCATTCCCTTCTTGGCCAATTCTTATTTTATTTTCTCAGATCAAAGAAACATGGTTGCTAGTCCACAGTTATTATTATTATTATTATTATCCTTTTGAGATAATATTTATTTCAAGTTATCCCATTCCATTTCATATGCATTTGATAATTCTCATTAAAACAAAATTAGTTTTTGCCTCGTTTGAGAAAGTTAGATGCAACTTTCAAAAATTTTTAGAGGTGTTCGGGGCCTAAAGTTGAGTTGGGTGTTTGGATCTCCTATTATCATAGTTTGAATATTATCATTATTTTAATCCACATACTTAAGTA

Coding sequence (CDS)

ATGAAGATTTTATGTTTGTCTCATGGTAGCTTGCTCCATTTCCCTTATGGAATTTTCCCCAAGTTTTTGGACATGTACTTCCACTTTGGTCAAGGCCGCCACTTAACCCTAAGACAGATCAAAGACGAGTGGGGAACCTCGCAGTGGGCGGAGGTTTTATCTGCTGATGCCTTTTCTGCATTTGAGGATGCTGGGTTGAATGATATCAAGGCTGTAAAGGAAACTGGGCATAGATTCCGAGAGACCGTTCTTGCTCTTGGAGGTGGAAGAGCTCCATCAGAGGTTTTTGTTGAATTTCGAGGGCGAGAACCTTCACCAGAACCACTGCTCCGGCACAGTGGCCTTTTGCCTGGCATAGCGACGGCATGA

Protein sequence

MKILCLSHGSLLHFPYGIFPKFLDMYFHFGQGRHLTLRQIKDEWGTSQWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPEPLLRHSGLLPGIATA
Homology
[Close]
BLAST of Lsi07G003140 vs. ExPASy Swiss-Prot
Match: Q94AM1 (Organellar oligopeptidase A, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OOP PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-29
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGL+DIKAVKETG RFR T+LALGGG+AP +VFVEFRGREPSPE
Sbjct: 717 KWAEVLSADAFSAFEDAGLDDIKAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPE 776

Query: 108 PLLRHSGLLPGIATA 123
           PLLRH+GLL   A+A
Sbjct: 777 PLLRHNGLLAASASA 791

[Close]
BLAST of Lsi07G003140 vs. ExPASy Swiss-Prot
Match: Q949P2 (Probable cytosolic oligopeptidase A OS=Arabidopsis thaliana OX=3702 GN=CYOP PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 8.0e-29
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGL+DIKAVKETG RFR T+LALGGG+AP +VFVEFRGREPSPE
Sbjct: 629 KWAEVLSADAFSAFEDAGLDDIKAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPE 688

Query: 108 PLLRHSGLLPGIA 121
           PLLRH+GLL   A
Sbjct: 689 PLLRHNGLLAASA 701

[Close]
BLAST of Lsi07G003140 vs. ExPASy Swiss-Prot
Match: P44573 (Oligopeptidase A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=prlC PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 35/69 (50.72%), Postives = 44/69 (63.77%), Query Frame = 0 

Query: 49  WAEVLSADAFSAFEDAGL-NDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 108
           WAEVLSADA+S FE+ G+ N I     TG  F + +L  GG   P E+F  FRGREP  +
Sbjct: 617 WAEVLSADAYSRFEEEGIFNPI-----TGKSFLDEILTRGGSEEPMELFKRFRGREPQLD 676

Query: 109 PLLRHSGLL 117
            LLRH G++
Sbjct: 677 ALLRHKGIM 680

[Close]
BLAST of Lsi07G003140 vs. ExPASy Swiss-Prot
Match: P27298 (Oligopeptidase A OS=Escherichia coli (strain K12) OX=83333 GN=prlC PE=3 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 2.9e-10
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0 

Query: 49  WAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPEP 108
           WA+VL+ADAFS FE+ G+ +    +ETG  F + +L+ GG   P ++F  FRGREP  + 
Sbjct: 616 WADVLAADAFSRFEEEGIFN----RETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDA 675

Query: 109 LLRHSGL 116
           +L H G+
Sbjct: 676 MLEHYGI 678

[Close]
BLAST of Lsi07G003140 vs. ExPASy Swiss-Prot
Match: P27237 (Oligopeptidase A OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=prlC PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10
Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0 

Query: 49  WAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPEP 108
           WA+VL+ADA+S FE+ G+ +    +ETG  F + +L  GG   P E+F  FRGREP  + 
Sbjct: 616 WADVLAADAYSRFEEEGIFN----RETGQSFLDNILTRGGSEEPMELFKRFRGREPQLDA 675

Query: 109 LLRHSGL 116
           +L H G+
Sbjct: 676 MLEHYGI 678

[Close]
BLAST of Lsi07G003140 vs. ExPASy TrEMBL
Match: A0A5D3D7N4 (Putative cytosolic oligopeptidase A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold416G00520 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLNDI+AVKETGHRFRETVLALGGGRAP EVFVEFRGREPSPE
Sbjct: 709 KWAEVLSADAFSAFEDAGLNDIEAVKETGHRFRETVLALGGGRAPLEVFVEFRGREPSPE 768

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLL G+ATA
Sbjct: 769 PLLRHSGLLAGLATA 783

[Close]
BLAST of Lsi07G003140 vs. ExPASy TrEMBL
Match: A0A1S3BS19 (probable cytosolic oligopeptidase A OS=Cucumis melo OX=3656 GN=LOC103492908 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.3e-31
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLNDI+AVKETGHRFRETVLALGGGRAP EVFVEFRGREPSPE
Sbjct: 724 KWAEVLSADAFSAFEDAGLNDIEAVKETGHRFRETVLALGGGRAPLEVFVEFRGREPSPE 783

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLL G+ATA
Sbjct: 784 PLLRHSGLLAGLATA 798

[Close]
BLAST of Lsi07G003140 vs. ExPASy TrEMBL
Match: A0A6J1J8N1 (probable cytosolic oligopeptidase A OS=Cucurbita maxima OX=3661 GN=LOC111482754 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.8e-31
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLND KAVKETGHRFRET+LALGGGRAP EVFVEFRGREPSPE
Sbjct: 721 KWAEVLSADAFSAFEDAGLNDSKAVKETGHRFRETILALGGGRAPLEVFVEFRGREPSPE 780

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLLPG A A
Sbjct: 781 PLLRHSGLLPGSAAA 795

[Close]
BLAST of Lsi07G003140 vs. ExPASy TrEMBL
Match: A0A6J1E479 (probable cytosolic oligopeptidase A OS=Cucurbita moschata OX=3662 GN=LOC111430657 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 6.8e-31
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLND KAVKETGHRFRET+LALGGGRAP EVFVEFRGREPSPE
Sbjct: 721 KWAEVLSADAFSAFEDAGLNDSKAVKETGHRFRETILALGGGRAPLEVFVEFRGREPSPE 780

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLLPG A A
Sbjct: 781 PLLRHSGLLPGSAAA 795

[Close]
BLAST of Lsi07G003140 vs. ExPASy TrEMBL
Match: A0A6J1CHM9 (probable cytosolic oligopeptidase A OS=Momordica charantia OX=3673 GN=LOC111011725 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.9e-31
Identity = 69/75 (92.00%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLND KAV+ETG RFRET+LALGGGRAPSEVFVEFRGREPSPE
Sbjct: 721 KWAEVLSADAFSAFEDAGLNDRKAVEETGRRFRETILALGGGRAPSEVFVEFRGREPSPE 780

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLLPGIA A
Sbjct: 781 PLLRHSGLLPGIAAA 795

[Close]
BLAST of Lsi07G003140 vs. NCBI nr
Match: KAA0058998.1 (putative cytosolic oligopeptidase A [Cucumis melo var. makuwa] >TYK19554.1 putative cytosolic oligopeptidase A [Cucumis melo var. makuwa])

HSP 1 Score: 144.8 bits (364), Expect = 4.8e-31
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLNDI+AVKETGHRFRETVLALGGGRAP EVFVEFRGREPSPE
Sbjct: 709 KWAEVLSADAFSAFEDAGLNDIEAVKETGHRFRETVLALGGGRAPLEVFVEFRGREPSPE 768

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLL G+ATA
Sbjct: 769 PLLRHSGLLAGLATA 783

[Close]
BLAST of Lsi07G003140 vs. NCBI nr
Match: XP_008451681.1 (PREDICTED: probable cytosolic oligopeptidase A [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 4.8e-31
Identity = 70/75 (93.33%), Postives = 73/75 (97.33%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLNDI+AVKETGHRFRETVLALGGGRAP EVFVEFRGREPSPE
Sbjct: 724 KWAEVLSADAFSAFEDAGLNDIEAVKETGHRFRETVLALGGGRAPLEVFVEFRGREPSPE 783

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLL G+ATA
Sbjct: 784 PLLRHSGLLAGLATA 798

[Close]
BLAST of Lsi07G003140 vs. NCBI nr
Match: XP_038895779.1 (LOW QUALITY PROTEIN: probable cytosolic oligopeptidase A [Benincasa hispida])

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-30
Identity = 68/75 (90.67%), Postives = 72/75 (96.00%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLNDIKAVKETGHRFRET+LALGGG+AP EVFVEFRGREPSPE
Sbjct: 721 KWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETILALGGGKAPLEVFVEFRGREPSPE 780

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLL G+ TA
Sbjct: 781 PLLRHSGLLSGVGTA 795

[Close]
BLAST of Lsi07G003140 vs. NCBI nr
Match: KAG6576605.1 (Organellar oligopeptidase A, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLND KAVKETGHRFRET+LALGGGRAP EVFVEFRGREPSPE
Sbjct: 314 KWAEVLSADAFSAFEDAGLNDSKAVKETGHRFRETILALGGGRAPLEVFVEFRGREPSPE 373

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLLPG A A
Sbjct: 374 PLLRHSGLLPGSAAA 388

[Close]
BLAST of Lsi07G003140 vs. NCBI nr
Match: XP_022922757.1 (probable cytosolic oligopeptidase A [Cucurbita moschata])

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30
Identity = 69/75 (92.00%), Postives = 71/75 (94.67%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGLND KAVKETGHRFRET+LALGGGRAP EVFVEFRGREPSPE
Sbjct: 721 KWAEVLSADAFSAFEDAGLNDSKAVKETGHRFRETILALGGGRAPLEVFVEFRGREPSPE 780

Query: 108 PLLRHSGLLPGIATA 123
           PLLRHSGLLPG A A
Sbjct: 781 PLLRHSGLLPGSAAA 795

[Close]
BLAST of Lsi07G003140 vs. TAIR 10
Match: AT5G65620.1 (Zincin-like metalloproteases family protein )

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-30
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGL+DIKAVKETG RFR T+LALGGG+AP +VFVEFRGREPSPE
Sbjct: 717 KWAEVLSADAFSAFEDAGLDDIKAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPE 776

Query: 108 PLLRHSGLLPGIATA 123
           PLLRH+GLL   A+A
Sbjct: 777 PLLRHNGLLAASASA 791

[Close]
BLAST of Lsi07G003140 vs. TAIR 10
Match: AT5G10540.1 (Zincin-like metalloproteases family protein )

HSP 1 Score: 127.9 bits (320), Expect = 5.7e-30
Identity = 61/73 (83.56%), Postives = 67/73 (91.78%), Query Frame = 0 

Query: 48  QWAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPE 107
           +WAEVLSADAFSAFEDAGL+DIKAVKETG RFR T+LALGGG+AP +VFVEFRGREPSPE
Sbjct: 629 KWAEVLSADAFSAFEDAGLDDIKAVKETGQRFRNTILALGGGKAPLKVFVEFRGREPSPE 688

Query: 108 PLLRHSGLLPGIA 121
           PLLRH+GLL   A
Sbjct: 689 PLLRHNGLLAASA 701

[Close]
BLAST of Lsi07G003140 vs. TAIR 10
Match: AT1G67690.1 (Zincin-like metalloproteases family protein )

HSP 1 Score: 47.4 bits (111), Expect = 9.7e-06
Identity = 25/62 (40.32%), Postives = 37/62 (59.68%), Query Frame = 0 

Query: 49  WAEVLSADAFSAFEDAGLNDIKAVKETGHRFRETVLALGGGRAPSEVFVEFRGREPSPEP 108
           W+EV +AD F++    G  ++ A    G +FR+ VLA GGG+ P E+   F GREPS + 
Sbjct: 645 WSEVYAADIFASKFGDGHPNLYA----GLQFRDKVLAPGGGKEPMELLTNFLGREPSTQA 702

Query: 109 LL 111
            +
Sbjct: 705 FI 702

The following BLAST results are available for this feature:
BLAST of Lsi07G003140 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94AM12.1e-2982.67Organellar oligopeptidase A, chloroplastic/mitochondrial OS=Arabidopsis thaliana... [more]
Q949P28.0e-2983.56Probable cytosolic oligopeptidase A OS=Arabidopsis thaliana OX=3702 GN=CYOP PE=1... [more]
P445737.5e-1150.72Oligopeptidase A OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20... [more]
P272982.9e-1044.78Oligopeptidase A OS=Escherichia coli (strain K12) OX=83333 GN=prlC PE=3 SV=3[more]
P272373.7e-1044.78Oligopeptidase A OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)... [more]
BLAST of Lsi07G003140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D7N42.3e-3193.33Putative cytosolic oligopeptidase A OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S3BS192.3e-3193.33probable cytosolic oligopeptidase A OS=Cucumis melo OX=3656 GN=LOC103492908 PE=3... [more]
A0A6J1J8N16.8e-3192.00probable cytosolic oligopeptidase A OS=Cucurbita maxima OX=3661 GN=LOC111482754 ... [more]
A0A6J1E4796.8e-3192.00probable cytosolic oligopeptidase A OS=Cucurbita moschata OX=3662 GN=LOC11143065... [more]
A0A6J1CHM98.9e-3192.00probable cytosolic oligopeptidase A OS=Momordica charantia OX=3673 GN=LOC1110117... [more]
BLAST of Lsi07G003140 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0058998.14.8e-3193.33putative cytosolic oligopeptidase A [Cucumis melo var. makuwa] >TYK19554.1 putat... [more]
XP_008451681.14.8e-3193.33PREDICTED: probable cytosolic oligopeptidase A [Cucumis melo][more]
XP_038895779.11.1e-3090.67LOW QUALITY PROTEIN: probable cytosolic oligopeptidase A [Benincasa hispida][more]
KAG6576605.11.4e-3092.00Organellar oligopeptidase A, chloroplastic/mitochondrial, partial [Cucurbita arg... [more]
XP_022922757.11.4e-3092.00probable cytosolic oligopeptidase A [Cucurbita moschata][more]
BLAST of Lsi07G003140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65620.11.5e-3082.67Zincin-like metalloproteases family protein [more]
AT5G10540.15.7e-3083.56Zincin-like metalloproteases family protein [more]
AT1G67690.19.7e-0640.32Zincin-like metalloproteases family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1370.40coord: 25..120
e-value: 5.7E-28
score: 99.9
NoneNo IPR availablePANTHERPTHR11804:SF73CYTOSOLIC OLIGOPEPTIDASE A-RELATEDcoord: 47..117
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 15..114
IPR001567Peptidase M3A/M3B catalytic domainPFAMPF01432Peptidase_M3coord: 48..114
e-value: 9.9E-13
score: 48.1
IPR045090Peptidase M3A/M3BPANTHERPTHR11804PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATEDcoord: 47..117

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G003140.1Lsi07G003140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004222 metalloendopeptidase activity