Lsi06G014690 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G014690
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Phd finger protein
Location	chr06: 25195574 .. 25200194 (-)
RNA-Seq Expression	Lsi06G014690
Synteny	Lsi06G014690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTGTTGGTATTTGGATAAGAGTGGAATTTGGGGATTTGACCATGGGACGCGCCATAGGTTGGTTAATTTCTGGTTATTGTTGGTGATGACTAGAGGCCGATGTCACCTGGGAAATAAGATGATGGGTAGGGGTGCGGATGGAGGCTGTGGTACTGAGGAGAGGCCTTGTCCAGTGGCAAGAGTGCCGAACAGAATAACGTTGACCCAAACTCAAACACACGAGGAGAAGCTGTCTACTGTGGACATTGATTATTACGCGCAGGCTCAAAAGGCTTTATGTGAGCGTTCGCCATTTGATGTTGCGGAAGAGAGTTCAGCTCCTTGTGTCCCTACTTTGCCCAGTAGGTTGGGTAACTTCTTGAGTAGACATACGGGTGGCAAGAAACGGCAGAGGAAATCCAATTCCGGGGCAGACAAGAAGTCTTCTAGGCAAGGTGAAAGGTCGCGTGGTTCCAACATTTGGGTTGAGACAGAGGAATATTTTAGAGACTTGACGCTGTCTGATGTAGACACTTTGCGTACAGCGTCTTCCTTTAGTGGCTTAGTGGCTAGGAAATGTTTTTCAATTCCGTCTTCAAGAGATGTTCCAGAAACAAAAGTAGGTGGCAGTGAGAATATTAGTGATGAGAATACGGATGGGGCCATTGTTAAAGACGAGGTTGAGGATAATCGTTTGTGCTCGGATGTGGGCATGGTTGAAACCAGTGGTTCACCTCTCGAAGACAAGGGTTGTTTTAATTTGGATTCTTCTTTCGGCTTAGAATGGCTTTTAGGTTGTAGGAATAAGGTGTCTTTAACTTCGGAGCGGCCTTCGAAGAAACGAAAGCTTTTAGGTGGTGATGCAGGATTGGAAAAAGTTCTGATTGTTTCTCCTTGCGATGGAAATCCATCTTTGTGCCACTTTTGCTCTAAGGGTGATAGGGACAAAGGGTTAAATCCATTAGTTACTTGCAGTNGATTGTTCAACTAATTAATAGACCATACATAATCATACAATTTGTAGTCTAATGTTTTATTATAAATCTGTAGTGTAGTTATTATATCGTTTTAAAGAGATTATTTATAAAAAGACCCAACATTTCAAAAGTCATTGAAGCTAAAACTTAATTATAATCTTTGTTCATGTACTCTCATTAAATTTTACAAGTCATGCATTCACATGGAACCAAATTAAAAGTGAGTTAATTAATACACTTTATTTGTTGTTGCTAATTAAATTACCCCTTAACAAATAATATAATACAATGAGGAGGAAAAAAATAAATAAGGCTCAAATAATTAACTTGAAGAACAAAATATTCTTATACTTATAATAAGAAAAACATAAGAAATGGTGTTGTTTACAACAAATAACACTTTAATTTTCTCCTAATATAATCCTTGGTTGGTTTGAAATATTGAATAACATAAAAAGGGCAGTGGGTATTTCTAGCCAATTACATCATCTAATGGCTAATAGAGGCTCTCAAAATTAAAAGAGATTGCAATCTTCAACCAAAAACTAAAGAGACTAATATATCAAGAAAGTGACTAGATTCTTTTCTAATTTTAATTTTTTTTTCTATTTTTTTTTCTTTTTTCTTGGAAATATTGTATGCAACAACAAACAATGAGTGGTCATGAGAGGAATCAACTAATGCAAGCTTAGGGACAACAAATTGAAAATTTGAAACCATATATATTAGAGGAACAATGACTAAAGCAAGAAATTTGTAAATGTTATGCAAAAGGCAAAGGATAATTAAATAGTCATCAAATATTGTTGTTTAAGAATATTATAGTTACACTCCATGCGAATAAACCAATTGAATAAGATTTGAAGAGATCATTATTGTTGATGCGATTTTTTAAAACTAAACGTGCTTCTCACATGGTGTTTAATTTGCCAATGAGTCTTTATCAACCGTGAGTTTTCGACTTTTTGCTTGATTAATTGGCCCTTTGAGATGTATAATGCGTACTTTTGAGAGAAATTGCGTTTTCTCTTTTTATGGAAGGGAGCGCATTGAAAATTCTCTTTTCATACCCATCAACTCAAGCCGCATTATGGCAAGTTTTGCATTGATAATGTCGGTGAACGGTTTTGGGTCAAGTTGGAGGGAGTTTTACTGTTCCTCTTTGCTATCACCTCAATATATTGTGCTCTCGTTCGATTCATGTATTAATGAGCTAAGTTGTCTCTATCTGTCCAATCCTTATTTTGCCTGTAAGTGTAACTAATTGTAAACAATCATAATTAGATAGGACCTATTATGATTGATTAAAAATGGTTGGTTGTTCCAAAATCGTTGCATTTGAAGCACATTATTATTGCCATAAAGCAAGAAAATATATTAGTGAAAAATATCAAAAGGCTCACTTGAAGAATATATTCAACTATTATCAATATAAGCACTTATATAGCATAGGACAAATTGTATAAAAATAATTATGTATTAAGATTATTTTTAAACATGCGACTATCTATTGTAAGCTAGTAATAAATAGTTAATTACTCAAATTTGGTATAGTTTAAAATCCAATCAATTTTTCTCTATTTAAACTTTTTATATATACCAAAAAGAAAAAATTGTTATGTTCAATTTTGGCTACACACTAACATCAAAATGCATAAAATTTTAAGGGCTAAGATATGGTCAGTGTACTTTAAAATTTATTTAATTTTAATTTTTATACTTTCAATAAATATTAAATTTAAAATATATTAAAATAAAAATACAGAGACTAAAATTGATCAAACTTAAGTATTTTAACTTAAGGAAATTGTTGTGTATAGAAAAAAAACAAAACTAATTACACAAATAAAAAAAAAGTACAGCCTATGCTTTTCTATTTTCCACTATTTTTTTCTATATTGTAATTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTATATATATATATATATATATATATATATATATATATATATAGGAAAGTAAACTATTTTTTTTTTTAAGGTTTTAAAACTAAAATGAGGTTTGAAAATTCAAAGTAAGCATTATTAAAGTCAAAAGAAAAGTGATATGAAACCAAACCAGATTTTTAATATATTTGAAATGTTTTTAAGGAAAATCAAAAACACATTTACATGGAGTGGTGGGGCTAAGGAGAAGCTAATTCCACCGGAAATGTTCCTTTCCATACTAACAAACAAGCTGTCAATTTAG

mRNA sequence

ATGGCAGTAGGCCGATGTCACCTGGGAAATAAGATGATGGGTAGGGGTGCGGATGGAGGCTGTGGTACTGAGGAGAGGCCTTGTCCAGTGGCAAGAGTGCCGAACAGAATAACGTTGACCCAAACTCAAACACACGAGGAGAAGCTGTCTACTGTGGACATTGATTATTACGCGCAGGCTCAAAAGGCTTTATGTGAGCGTTCGCCATTTGATGTTGCGGAAGAGAGTTCAGCTCCTTGTGTCCCTACTTTGCCCAGTAGGTTGGGTAACTTCTTGAGTAGACATACGGGTGGCAAGAAACGGCAGAGGAAATCCAATTCCGGGGCAGACAAGAAGTCTTCTAGGCAAGGTGAAAGGTCGCGTGGTTCCAACATTTGGGTTGAGACAGAGGAATATTTTAGAGACTTGACGCTGTCTGATGTAGACACTTTGCGTACAGCGTCTTCCTTTAGTGGCTTAGTGGCTAGGAAATGTTTTTCAATTCCGTCTTCAAGAGATGTTCCAGAAACAAAAGTAGGTGGCAGTGAGAATATTAGTGATGAGAATACGGATGGGGCCATTGTTAAAGACGAGGTTGAGGATAATCGTTTGTGCTCGGATGTGGGCATGGTTGAAACCAGTGGTTCACCTCTCGAAGACAAGGGTTGTTTTAATTTGGATTCTTCTTTCGGCTTAGAATGGCTTTTAGGTTGTAGGAATAAGGTGTCTTTAACTTCGGAGCGGCCTTCGAAGAAACGAAAGCTTTTAGGTGGTGATGCAGGATTGGAAAAAGTTCTGATTGTTTCTCCTTGCGATGGAAATCCATCTTTGTGCCACTTTTGCTCTAAGGGTGATAGGGACAAAGGGAAAATCAAAAACACATTTACATGGAGTGGTGGGGCTAAGGAGAAGCTAATTCCACCGGAAATGTTCCTTTCCATACTAACAAACAAGCTGTCAATTTAG

Coding sequence (CDS)

ATGGCAGTAGGCCGATGTCACCTGGGAAATAAGATGATGGGTAGGGGTGCGGATGGAGGCTGTGGTACTGAGGAGAGGCCTTGTCCAGTGGCAAGAGTGCCGAACAGAATAACGTTGACCCAAACTCAAACACACGAGGAGAAGCTGTCTACTGTGGACATTGATTATTACGCGCAGGCTCAAAAGGCTTTATGTGAGCGTTCGCCATTTGATGTTGCGGAAGAGAGTTCAGCTCCTTGTGTCCCTACTTTGCCCAGTAGGTTGGGTAACTTCTTGAGTAGACATACGGGTGGCAAGAAACGGCAGAGGAAATCCAATTCCGGGGCAGACAAGAAGTCTTCTAGGCAAGGTGAAAGGTCGCGTGGTTCCAACATTTGGGTTGAGACAGAGGAATATTTTAGAGACTTGACGCTGTCTGATGTAGACACTTTGCGTACAGCGTCTTCCTTTAGTGGCTTAGTGGCTAGGAAATGTTTTTCAATTCCGTCTTCAAGAGATGTTCCAGAAACAAAAGTAGGTGGCAGTGAGAATATTAGTGATGAGAATACGGATGGGGCCATTGTTAAAGACGAGGTTGAGGATAATCGTTTGTGCTCGGATGTGGGCATGGTTGAAACCAGTGGTTCACCTCTCGAAGACAAGGGTTGTTTTAATTTGGATTCTTCTTTCGGCTTAGAATGGCTTTTAGGTTGTAGGAATAAGGTGTCTTTAACTTCGGAGCGGCCTTCGAAGAAACGAAAGCTTTTAGGTGGTGATGCAGGATTGGAAAAAGTTCTGATTGTTTCTCCTTGCGATGGAAATCCATCTTTGTGCCACTTTTGCTCTAAGGGTGATAGGGACAAAGGGAAAATCAAAAACACATTTACATGGAGTGGTGGGGCTAAGGAGAAGCTAATTCCACCGGAAATGTTCCTTTCCATACTAACAAACAAGCTGTCAATTTAG

Protein sequence

MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQAQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERSRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENISDENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTSERPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKGKIKNTFTWSGGAKEKLIPPEMFLSILTNKLSI

Homology

[Close]

BLAST of Lsi06G014690 vs. ExPASy TrEMBL
Match: A0A6J1K115 (uncharacterized protein LOC111489181 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489181 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.6e-140
Identity = 253/282 (89.72%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M   RCHLG KMMGRGADGGCGTEERPC VARVPNRITL QTQTHEEKLSTVDIDYYAQA
Sbjct: 1   MTRDRCHLGKKMMGRGADGGCGTEERPCSVARVPNRITLAQTQTHEEKLSTVDIDYYAQA 60

Query: 61  QKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120
           QKALC+RSPFDVAEE+SAPCV TLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS
Sbjct: 61  QKALCDRSPFDVAEETSAPCVSTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120

Query: 121 RGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENISD 180
           RGSNIWVETEEYFRDLTLSDVDTLR ASSFSGLV+RKCFSIPSS +VPE  VGGSEN+SD
Sbjct: 121 RGSNIWVETEEYFRDLTLSDVDTLRAASSFSGLVSRKCFSIPSSGNVPEANVGGSENVSD 180

Query: 181 ENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTSE 240
           ENTDGAIVKDEVED+RLC DVGMVE SGS LEDKGC NLDSS GLEWLLGCRNKVSLTSE
Sbjct: 181 ENTDGAIVKDEVEDDRLCPDVGMVEASGSLLEDKGCSNLDSSCGLEWLLGCRNKVSLTSE 240

Query: 241 RPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           RPSKKRKLLGGDAGLEKVL+ S CDGN SLCHFCSKG  +KG
Sbjct: 241 RPSKKRKLLGGDAGLEKVLVASSCDGNSSLCHFCSKGGTNKG 282

[Close]

BLAST of Lsi06G014690 vs. ExPASy TrEMBL
Match: A0A6J1JRN9 (uncharacterized protein LOC111489181 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489181 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.6e-140
Identity = 253/282 (89.72%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M   RCHLG KMMGRGADGGCGTEERPC VARVPNRITL QTQTHEEKLSTVDIDYYAQA
Sbjct: 1   MTRDRCHLGKKMMGRGADGGCGTEERPCSVARVPNRITLAQTQTHEEKLSTVDIDYYAQA 60

Query: 61  QKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120
           QKALC+RSPFDVAEE+SAPCV TLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS
Sbjct: 61  QKALCDRSPFDVAEETSAPCVSTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120

Query: 121 RGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENISD 180
           RGSNIWVETEEYFRDLTLSDVDTLR ASSFSGLV+RKCFSIPSS +VPE  VGGSEN+SD
Sbjct: 121 RGSNIWVETEEYFRDLTLSDVDTLRAASSFSGLVSRKCFSIPSSGNVPEANVGGSENVSD 180

Query: 181 ENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTSE 240
           ENTDGAIVKDEVED+RLC DVGMVE SGS LEDKGC NLDSS GLEWLLGCRNKVSLTSE
Sbjct: 181 ENTDGAIVKDEVEDDRLCPDVGMVEASGSLLEDKGCSNLDSSCGLEWLLGCRNKVSLTSE 240

Query: 241 RPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           RPSKKRKLLGGDAGLEKVL+ S CDGN SLCHFCSKG  +KG
Sbjct: 241 RPSKKRKLLGGDAGLEKVLVASSCDGNSSLCHFCSKGGTNKG 282

[Close]

BLAST of Lsi06G014690 vs. ExPASy TrEMBL
Match: A0A6J1FEE0 (uncharacterized protein LOC111444957 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111444957 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.6e-137
Identity = 250/282 (88.65%), Postives = 256/282 (90.78%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M   RC LG KMMGRGADGGCGTEERPC VARVPNRITL QTQTHEEKL TVDIDYYAQA
Sbjct: 1   MTRDRCRLGKKMMGRGADGGCGTEERPCLVARVPNRITLAQTQTHEEKLCTVDIDYYAQA 60

Query: 61  QKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120
           QKALCERSPFDVAEE+SAPCV TLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS
Sbjct: 61  QKALCERSPFDVAEETSAPCVSTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120

Query: 121 RGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENISD 180
           RGSNIWVETEEYFRDLTLSDVDTLR ASSFSGLV+RKCFSIPSS +VPE  VGGSEN+S 
Sbjct: 121 RGSNIWVETEEYFRDLTLSDVDTLRAASSFSGLVSRKCFSIPSSGNVPEANVGGSENVSG 180

Query: 181 ENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTSE 240
           ENTDGAIVKDEVED+RLC DVGMVE SGS LEDKGC N DSS GLEWLLGCRNKVSLTSE
Sbjct: 181 ENTDGAIVKDEVEDDRLCPDVGMVEASGSLLEDKGCSNFDSSCGLEWLLGCRNKVSLTSE 240

Query: 241 RPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           RPSKKRKLLGGDAGLEKVL+ S CDGN SLCHFCSKG   KG
Sbjct: 241 RPSKKRKLLGGDAGLEKVLVASSCDGNSSLCHFCSKGGTTKG 282

[Close]

BLAST of Lsi06G014690 vs. ExPASy TrEMBL
Match: A0A6J1FFB8 (uncharacterized protein LOC111444957 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111444957 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.6e-137
Identity = 250/282 (88.65%), Postives = 256/282 (90.78%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M   RC LG KMMGRGADGGCGTEERPC VARVPNRITL QTQTHEEKL TVDIDYYAQA
Sbjct: 1   MTRDRCRLGKKMMGRGADGGCGTEERPCLVARVPNRITLAQTQTHEEKLCTVDIDYYAQA 60

Query: 61  QKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120
           QKALCERSPFDVAEE+SAPCV TLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS
Sbjct: 61  QKALCERSPFDVAEETSAPCVSTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120

Query: 121 RGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENISD 180
           RGSNIWVETEEYFRDLTLSDVDTLR ASSFSGLV+RKCFSIPSS +VPE  VGGSEN+S 
Sbjct: 121 RGSNIWVETEEYFRDLTLSDVDTLRAASSFSGLVSRKCFSIPSSGNVPEANVGGSENVSG 180

Query: 181 ENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTSE 240
           ENTDGAIVKDEVED+RLC DVGMVE SGS LEDKGC N DSS GLEWLLGCRNKVSLTSE
Sbjct: 181 ENTDGAIVKDEVEDDRLCPDVGMVEASGSLLEDKGCSNFDSSCGLEWLLGCRNKVSLTSE 240

Query: 241 RPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           RPSKKRKLLGGDAGLEKVL+ S CDGN SLCHFCSKG   KG
Sbjct: 241 RPSKKRKLLGGDAGLEKVLVASSCDGNSSLCHFCSKGGTTKG 282

[Close]

BLAST of Lsi06G014690 vs. ExPASy TrEMBL
Match: A0A5A7VLM9 (Phd finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G001270 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 8.1e-137
Identity = 252/284 (88.73%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEE--KLSTVDIDYYA 60
           M   RCHLG KMMGRGADGGCGTEERPCPV RVPNRITLTQTQTH+E  KLSTVDIDYYA
Sbjct: 1   MTRDRCHLGKKMMGRGADGGCGTEERPCPVGRVPNRITLTQTQTHQENQKLSTVDIDYYA 60

Query: 61  QAQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGE 120
           QAQKALCERSPFDVAEESSAP VPTLPSRLG+FLSRHTGGKKRQRKSNSGADKKSSRQGE
Sbjct: 61  QAQKALCERSPFDVAEESSAPFVPTLPSRLGSFLSRHTGGKKRQRKSNSGADKKSSRQGE 120

Query: 121 RSRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENI 180
           RSRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPS  D PE  V G+EN+
Sbjct: 121 RSRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSLGDAPEANVDGTENV 180

Query: 181 SDENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLT 240
             ENTDGAIVKDEVE   LCSDVGMV+TSGSPLED+   NL SS GLEWLLGCRNKVSLT
Sbjct: 181 IGENTDGAIVKDEVEGVPLCSDVGMVQTSGSPLEDRDLLNLGSSSGLEWLLGCRNKVSLT 240

Query: 241 SERPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           SERPSKKRKLLGGDAGLEKVLIVSPCDGNP LCHFCSKGD DKG
Sbjct: 241 SERPSKKRKLLGGDAGLEKVLIVSPCDGNPFLCHFCSKGDTDKG 284

[Close]

BLAST of Lsi06G014690 vs. NCBI nr
Match: XP_038875394.1 (uncharacterized protein LOC120067860 isoform X2 [Benincasa hispida])

HSP 1 Score: 531.2 bits (1367), Expect = 6.1e-147
Identity = 265/283 (93.64%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEE-KLSTVDIDYYAQ 60
           M   RCHLG KMMGRGADGGCGTEERPCPVARVPNRITLTQT+T EE KLSTVDIDYYAQ
Sbjct: 14  MTRDRCHLGKKMMGRGADGGCGTEERPCPVARVPNRITLTQTRTDEEKKLSTVDIDYYAQ 73

Query: 61  AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER 120
           AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER
Sbjct: 74  AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER 133

Query: 121 SRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENIS 180
           SR SNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPS RDVPE  VGGSEN+S
Sbjct: 134 SRVSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSVRDVPEANVGGSENVS 193

Query: 181 DENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTS 240
           DENTDGAIVK+EVED+RLCSDVGMVETSGSPLEDKGC NLDS+FGLEWLLGCRNKVSLTS
Sbjct: 194 DENTDGAIVKEEVEDDRLCSDVGMVETSGSPLEDKGCLNLDSTFGLEWLLGCRNKVSLTS 253

Query: 241 ERPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           ERPSKKRKLLGGDAGLEKVL+VSPCDGNPSLCHFCSKGD DKG
Sbjct: 254 ERPSKKRKLLGGDAGLEKVLVVSPCDGNPSLCHFCSKGDTDKG 296

[Close]

BLAST of Lsi06G014690 vs. NCBI nr
Match: XP_038875392.1 (uncharacterized protein LOC120067860 isoform X1 [Benincasa hispida])

HSP 1 Score: 531.2 bits (1367), Expect = 6.1e-147
Identity = 265/283 (93.64%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEE-KLSTVDIDYYAQ 60
           M   RCHLG KMMGRGADGGCGTEERPCPVARVPNRITLTQT+T EE KLSTVDIDYYAQ
Sbjct: 14  MTRDRCHLGKKMMGRGADGGCGTEERPCPVARVPNRITLTQTRTDEEKKLSTVDIDYYAQ 73

Query: 61  AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER 120
           AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER
Sbjct: 74  AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER 133

Query: 121 SRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENIS 180
           SR SNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPS RDVPE  VGGSEN+S
Sbjct: 134 SRVSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSVRDVPEANVGGSENVS 193

Query: 181 DENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTS 240
           DENTDGAIVK+EVED+RLCSDVGMVETSGSPLEDKGC NLDS+FGLEWLLGCRNKVSLTS
Sbjct: 194 DENTDGAIVKEEVEDDRLCSDVGMVETSGSPLEDKGCLNLDSTFGLEWLLGCRNKVSLTS 253

Query: 241 ERPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           ERPSKKRKLLGGDAGLEKVL+VSPCDGNPSLCHFCSKGD DKG
Sbjct: 254 ERPSKKRKLLGGDAGLEKVLVVSPCDGNPSLCHFCSKGDTDKG 296

[Close]

BLAST of Lsi06G014690 vs. NCBI nr
Match: XP_038875395.1 (uncharacterized protein LOC120067860 isoform X3 [Benincasa hispida])

HSP 1 Score: 531.2 bits (1367), Expect = 6.1e-147
Identity = 265/283 (93.64%), Postives = 271/283 (95.76%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEE-KLSTVDIDYYAQ 60
           M   RCHLG KMMGRGADGGCGTEERPCPVARVPNRITLTQT+T EE KLSTVDIDYYAQ
Sbjct: 14  MTRDRCHLGKKMMGRGADGGCGTEERPCPVARVPNRITLTQTRTDEEKKLSTVDIDYYAQ 73

Query: 61  AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER 120
           AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER
Sbjct: 74  AQKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGER 133

Query: 121 SRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENIS 180
           SR SNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPS RDVPE  VGGSEN+S
Sbjct: 134 SRVSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSVRDVPEANVGGSENVS 193

Query: 181 DENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTS 240
           DENTDGAIVK+EVED+RLCSDVGMVETSGSPLEDKGC NLDS+FGLEWLLGCRNKVSLTS
Sbjct: 194 DENTDGAIVKEEVEDDRLCSDVGMVETSGSPLEDKGCLNLDSTFGLEWLLGCRNKVSLTS 253

Query: 241 ERPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           ERPSKKRKLLGGDAGLEKVL+VSPCDGNPSLCHFCSKGD DKG
Sbjct: 254 ERPSKKRKLLGGDAGLEKVLVVSPCDGNPSLCHFCSKGDTDKG 296

[Close]

BLAST of Lsi06G014690 vs. NCBI nr
Match: XP_022993047.1 (uncharacterized protein LOC111489181 isoform X1 [Cucurbita maxima])

HSP 1 Score: 507.3 bits (1305), Expect = 9.5e-140
Identity = 253/282 (89.72%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M   RCHLG KMMGRGADGGCGTEERPC VARVPNRITL QTQTHEEKLSTVDIDYYAQA
Sbjct: 1   MTRDRCHLGKKMMGRGADGGCGTEERPCSVARVPNRITLAQTQTHEEKLSTVDIDYYAQA 60

Query: 61  QKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120
           QKALC+RSPFDVAEE+SAPCV TLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS
Sbjct: 61  QKALCDRSPFDVAEETSAPCVSTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120

Query: 121 RGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENISD 180
           RGSNIWVETEEYFRDLTLSDVDTLR ASSFSGLV+RKCFSIPSS +VPE  VGGSEN+SD
Sbjct: 121 RGSNIWVETEEYFRDLTLSDVDTLRAASSFSGLVSRKCFSIPSSGNVPEANVGGSENVSD 180

Query: 181 ENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTSE 240
           ENTDGAIVKDEVED+RLC DVGMVE SGS LEDKGC NLDSS GLEWLLGCRNKVSLTSE
Sbjct: 181 ENTDGAIVKDEVEDDRLCPDVGMVEASGSLLEDKGCSNLDSSCGLEWLLGCRNKVSLTSE 240

Query: 241 RPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           RPSKKRKLLGGDAGLEKVL+ S CDGN SLCHFCSKG  +KG
Sbjct: 241 RPSKKRKLLGGDAGLEKVLVASSCDGNSSLCHFCSKGGTNKG 282

[Close]

BLAST of Lsi06G014690 vs. NCBI nr
Match: XP_022993048.1 (uncharacterized protein LOC111489181 isoform X2 [Cucurbita maxima])

HSP 1 Score: 507.3 bits (1305), Expect = 9.5e-140
Identity = 253/282 (89.72%), Postives = 261/282 (92.55%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M   RCHLG KMMGRGADGGCGTEERPC VARVPNRITL QTQTHEEKLSTVDIDYYAQA
Sbjct: 1   MTRDRCHLGKKMMGRGADGGCGTEERPCSVARVPNRITLAQTQTHEEKLSTVDIDYYAQA 60

Query: 61  QKALCERSPFDVAEESSAPCVPTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120
           QKALC+RSPFDVAEE+SAPCV TLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS
Sbjct: 61  QKALCDRSPFDVAEETSAPCVSTLPSRLGNFLSRHTGGKKRQRKSNSGADKKSSRQGERS 120

Query: 121 RGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPSSRDVPETKVGGSENISD 180
           RGSNIWVETEEYFRDLTLSDVDTLR ASSFSGLV+RKCFSIPSS +VPE  VGGSEN+SD
Sbjct: 121 RGSNIWVETEEYFRDLTLSDVDTLRAASSFSGLVSRKCFSIPSSGNVPEANVGGSENVSD 180

Query: 181 ENTDGAIVKDEVEDNRLCSDVGMVETSGSPLEDKGCFNLDSSFGLEWLLGCRNKVSLTSE 240
           ENTDGAIVKDEVED+RLC DVGMVE SGS LEDKGC NLDSS GLEWLLGCRNKVSLTSE
Sbjct: 181 ENTDGAIVKDEVEDDRLCPDVGMVEASGSLLEDKGCSNLDSSCGLEWLLGCRNKVSLTSE 240

Query: 241 RPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKGDRDKG 283
           RPSKKRKLLGGDAGLEKVL+ S CDGN SLCHFCSKG  +KG
Sbjct: 241 RPSKKRKLLGGDAGLEKVLVASSCDGNSSLCHFCSKGGTNKG 282

[Close]

BLAST of Lsi06G014690 vs. TAIR 10
Match: AT1G77800.1 (PHD finger family protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-56
Identity = 132/296 (44.59%), Postives = 176/296 (59.46%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M V +C    KMMGRG DGGCG EE+P    R   R+ L +   +E+ + +++ID+ AQA
Sbjct: 1   MNVDQCQWRKKMMGRGVDGGCGAEEKP---YRPFRRVALDKENGYED-MGSLEIDFLAQA 60

Query: 61  QKALCERSPFDVAEESSAP--CVPTLPSRLGNFLSRHTGGKKRQRKSNSGAD---KKSSR 120
            K L ERSPFDV E+ S     VPTLP  L N L  H+  KKR +KS+SGAD   KKSSR
Sbjct: 61  SKNLSERSPFDVPEDGSTSVLSVPTLPIALANLLKNHSDNKKRHKKSHSGADKKKKKSSR 120

Query: 121 QGERSRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPS----SRDVPETK 180
           QG++ R  +IW+E E+YFR L   D++TL   +S   L +R CFSIPS    S D+ + +
Sbjct: 121 QGDKLRSGSIWLEHEDYFRRLDFPDLETLSDLASLRSLSSRNCFSIPSVEYDSIDIQQRE 180

Query: 181 VGGSENISDENTDGAIVKDEVEDNRLCSDV--GMVETSGSPLEDKGCFNL--------DS 240
              S    D      +V ++++ N L  D+  G V      ++  G  N+        D 
Sbjct: 181 TDASAKNEDVVCGDGVVLEQIK-NLLTKDISEGTVRKEEDVVKPMGVDNVGNGISSGSDY 240

Query: 241 SFGLEWLLGCRNKVSLTSERPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKG 278
           S  LEW+LG RN++ LTSERPSKKRKLLG DAGL K+++ +PC+GN  LC FC  G
Sbjct: 241 SGSLEWVLGNRNRILLTSERPSKKRKLLGSDAGLGKLMVAAPCEGNALLCDFCCTG 291

[Close]

BLAST of Lsi06G014690 vs. TAIR 10
Match: AT1G77800.2 (PHD finger family protein )

HSP 1 Score: 217.6 bits (553), Expect = 1.4e-56
Identity = 132/296 (44.59%), Postives = 176/296 (59.46%), Query Frame = 0


Query: 1   MAVGRCHLGNKMMGRGADGGCGTEERPCPVARVPNRITLTQTQTHEEKLSTVDIDYYAQA 60
           M V +C    KMMGRG DGGCG EE+P    R   R+ L +   +E+ + +++ID+ AQA
Sbjct: 1   MNVDQCQWRKKMMGRGVDGGCGAEEKP---YRPFRRVALDKENGYED-MGSLEIDFLAQA 60

Query: 61  QKALCERSPFDVAEESSAP--CVPTLPSRLGNFLSRHTGGKKRQRKSNSGAD---KKSSR 120
            K L ERSPFDV E+ S     VPTLP  L N L  H+  KKR +KS+SGAD   KKSSR
Sbjct: 61  SKNLSERSPFDVPEDGSTSVLSVPTLPIALANLLKNHSDNKKRHKKSHSGADKKKKKSSR 120

Query: 121 QGERSRGSNIWVETEEYFRDLTLSDVDTLRTASSFSGLVARKCFSIPS----SRDVPETK 180
           QG++ R  +IW+E E+YFR L   D++TL   +S   L +R CFSIPS    S D+ + +
Sbjct: 121 QGDKLRSGSIWLEHEDYFRRLDFPDLETLSDLASLRSLSSRNCFSIPSVEYDSIDIQQRE 180

Query: 181 VGGSENISDENTDGAIVKDEVEDNRLCSDV--GMVETSGSPLEDKGCFNL--------DS 240
              S    D      +V ++++ N L  D+  G V      ++  G  N+        D 
Sbjct: 181 TDASAKNEDVVCGDGVVLEQIK-NLLTKDISEGTVRKEEDVVKPMGVDNVGNGISSGSDY 240

Query: 241 SFGLEWLLGCRNKVSLTSERPSKKRKLLGGDAGLEKVLIVSPCDGNPSLCHFCSKG 278
           S  LEW+LG RN++ LTSERPSKKRKLLG DAGL K+++ +PC+GN  LC FC  G
Sbjct: 241 SGSLEWVLGNRNRILLTSERPSKKRKLLGSDAGLGKLMVAAPCEGNALLCDFCCTG 291

The following BLAST results are available for this feature:

BLAST of Lsi06G014690 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi06G014690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K115	4.6e-140	89.72	uncharacterized protein LOC111489181 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JRN9	4.6e-140	89.72	uncharacterized protein LOC111489181 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FEE0	3.6e-137	88.65	uncharacterized protein LOC111444957 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FFB8	3.6e-137	88.65	uncharacterized protein LOC111444957 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7VLM9	8.1e-137	88.73	Phd finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold313G0...	[more]

BLAST of Lsi06G014690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875394.1	6.1e-147	93.64	uncharacterized protein LOC120067860 isoform X2 [Benincasa hispida]	[more]
XP_038875392.1	6.1e-147	93.64	uncharacterized protein LOC120067860 isoform X1 [Benincasa hispida]	[more]
XP_038875395.1	6.1e-147	93.64	uncharacterized protein LOC120067860 isoform X3 [Benincasa hispida]	[more]
XP_022993047.1	9.5e-140	89.72	uncharacterized protein LOC111489181 isoform X1 [Cucurbita maxima]	[more]
XP_022993048.1	9.5e-140	89.72	uncharacterized protein LOC111489181 isoform X2 [Cucurbita maxima]	[more]

BLAST of Lsi06G014690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77800.1	1.4e-56	44.59	PHD finger family protein	[more]
AT1G77800.2	1.4e-56	44.59	PHD finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..123
None	No IPR available	PANTHER	PTHR13793:SF145	OS02G0768750 PROTEIN	coord: 51..164 coord: 220..278
None	No IPR available	PANTHER	PTHR13793	PHD FINGER PROTEINS	coord: 51..164 coord: 220..278

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G014690.1	Lsi06G014690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding