Homology
BLAST of Lsi06G014630 vs. ExPASy Swiss-Prot
Match:
Q9SN85 (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H76 PE=2 SV=1)
HSP 1 Score: 733.4 bits (1892), Expect = 2.1e-210
Identity = 360/578 (62.28%), Postives = 448/578 (77.51%), Query Frame = 0
Query: 49 LISLIKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTA-STPFRDLGYSRRFFSLLT 108
L+SLI S T K QIHA ++RTS I++ V FL+R A S RD+ YS R FS
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 109 NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER-QGVRADPLSSSFAVKSCIRLLSLFSGV 168
NP +SH N M+RA+SLS++P EG ++R + R + A+PLSSSFA+K CI+ L G+
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 169 QIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNK 228
QIH +IF +G SDSLL+T++MDLYS C DACK+FDEIP+RD V+WNVL SC RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 229 RTRDALGLFEIMQSPKYLC-QPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESN 288
RTRD L LF+ M++ C +PD VTCLL LQACA+L AL+FG+++H ++ ++G + N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 289 LCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKG 348
L N+L+SMYSRCG +DKAY+VF M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 349 VEPDDHTFTAVLSACSHCGLVDEGRALFDRMRQ-EFTIVPNVHHYGCMVDLLGRAGMLDQ 408
+ P++ T T +LSACSH GLV EG FDRMR EF I PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 409 AYQLVMSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSS 468
AY L+ SME+ PD+T+WRTLLGACR+HG LGER+I HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433
Query: 469 AGNWDKVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQ 528
G W+KVTELR MKEK I+T PGC+ IEL G VHEF VDD+SHP K++IY+ L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493
Query: 529 LKIAGYEAEISSELHRLKA-EDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMD 588
LKIAGY AEI+SELH L++ E+KGYAL HSEKLAIAFG+L TPPG TIRV NLRTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553
Query: 589 CHNFAKYISSVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
CHNFAK++S VY+R V+VRDRSRFHHF+ G CSCND+W
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
BLAST of Lsi06G014630 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 458.8 bits (1179), Expect = 1.0e-127
Identity = 224/559 (40.07%), Postives = 350/559 (62.61%), Query Frame = 0
Query: 95 DLGYSRRFFSLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVK 154
DL + + F+ + V +N+M+ + SP + L +++ ME + V+A ++ +
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 155 SCIRLLSLFSGVQIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFD--------- 214
+C ++ +L G Q+ + I N + L +M+D+Y+ CG IEDA +LFD
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 215 ----------------------EIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPKY 274
+PQ+D+VAWN LIS +N + +AL +F +Q K
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 275 LCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLISMYSRCGRVDKA 334
+ + +++T + L ACA + ALE G IHSY+++HG ++ ++LI MYS+CG ++K+
Sbjct: 361 M-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 420
Query: 335 YEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHTFTAVLSACSHC 394
EVF+ + +++V WSA+I GL+M+G G EA++ F++MQ+ V+P+ TFT V ACSH
Sbjct: 421 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 480
Query: 395 GLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATLWRT 454
GLVDE +LF +M + IVP HY C+VD+LGR+G L++A + + +M + P ++W
Sbjct: 481 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 540
Query: 455 LLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKFMKEKGI 514
LLGAC+IH + NL E L+EL+ + G +VLL NIY+ G W+ V+ELRK M+ G+
Sbjct: 541 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 600
Query: 515 YTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHRLKA 574
PGC++IE++G++HEF D +HPM +K+Y +L E+ ++LK GYE EIS L ++
Sbjct: 601 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE 660
Query: 575 ED-KGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYISSVYNRKVVVR 622
E+ K +L+ HSEKLAI +G+++T + IRV NLR C DCH+ AK IS +Y+R+++VR
Sbjct: 661 EEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVR 720
BLAST of Lsi06G014630 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 458.0 bits (1177), Expect = 1.7e-127
Identity = 216/526 (41.06%), Postives = 339/526 (64.45%), Query Frame = 0
Query: 99 SRRFFSLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIR 158
+++ F + V +NAM+ Y+ + + E L +++DM + VR D + V +C +
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 159 LLSLFSGVQIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVL 218
S+ G Q+H I +G S+ ++ +++DLYS CG++E AC LF+ +P +DV++WN L
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 219 ISCLTRNKRTRDALGLF-EIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQ 278
I T ++AL LF E+++S + P+ VT L +L ACA L A++ G IH Y+ +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 398
Query: 279 H--GYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAI 338
G S+L SLI MY++CG ++ A++VF+ + K++ SW+A+I G +M+G +
Sbjct: 399 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 458
Query: 339 EAFWEMQKKGVEPDDHTFTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDL 398
+ F M+K G++PDD TF +LSACSH G++D GR +F M Q++ + P + HYGCM+DL
Sbjct: 459 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 518
Query: 399 LGRAGMLDQAYQLVMSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDY 458
LG +G+ +A +++ ME+ PD +W +LL AC++HG+ LGE E+LI+++ + G Y
Sbjct: 519 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 578
Query: 459 VLLLNIYSSAGNWDKVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIY 518
VLL NIY+SAG W++V + R + +KG+ PGC++IE++ VVHEF + D HP +IY
Sbjct: 579 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 638
Query: 519 EQLDEINKQLKIAGYEAEISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVA 578
L+E+ L+ AG+ + S L ++ E K AL +HSEKLAIAFG+++T PG + +
Sbjct: 639 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 698
Query: 579 NNLRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
NLR C +CH K IS +Y R+++ RDR+RFHHFR+G CSCNDYW
Sbjct: 699 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lsi06G014630 vs. ExPASy Swiss-Prot
Match:
A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 449.1 bits (1154), Expect = 8.0e-125
Identity = 231/565 (40.88%), Postives = 345/565 (61.06%), Query Frame = 0
Query: 64 QIHAHIIRTS-SIQDPIVS---LCFLTRTASTPFRDLGYSRRFFSLLTNPF-VSHYNAML 123
QIHA IR SI D + + +L S P + Y+ + FS + P V +N ++
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP--PMSYAHKVFSKIEKPINVFIWNTLI 94
Query: 124 RAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIRLLSLFSGVQIHARIFINGH 183
R Y+ + + +YR+M G V D + F +K+ + + G IH+ + +G
Sbjct: 95 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 154
Query: 184 QSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEI 243
S + S++ LY++CG + A K+FD++P++D+VAWN +I+ N + +AL L+
Sbjct: 155 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 214
Query: 244 MQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLISMYSRC 303
M S +PD T + LL ACA + AL G+R+H Y+ + G + N L+ +Y+RC
Sbjct: 215 MNSKG--IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 274
Query: 304 GRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQK-KGVEPDDHTFTAV 363
GRV++A +FD+M +KN VSW+++I GL++NG G+EAIE F M+ +G+ P + TF +
Sbjct: 275 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 334
Query: 364 LSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNP 423
L ACSHCG+V EG F RMR+E+ I P + H+GCMVDLL RAG + +AY+ + SM + P
Sbjct: 335 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 394
Query: 424 DATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 483
+ +WRTLLGAC +HG ++L E +++L+ +GDYVLL N+Y+S W V ++RK
Sbjct: 395 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 454
Query: 484 FMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISS 543
M G+ PG + +E+ VHEF + D SHP D IY +L E+ +L+ GY +IS+
Sbjct: 455 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 514
Query: 544 ELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYISSVYN 603
++ E+K A+ HSEK+AIAF +++TP I V NLR C DCH K +S VYN
Sbjct: 515 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 574
Query: 604 RKVVVRDRSRFHHFREGRCSCNDYW 622
R++VVRDRSRFHHF+ G CSC DYW
Sbjct: 575 REIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Lsi06G014630 vs. ExPASy Swiss-Prot
Match:
Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 443.7 bits (1140), Expect = 3.3e-123
Identity = 231/632 (36.55%), Postives = 361/632 (57.12%), Query Frame = 0
Query: 40 STPHLEREPLISLIKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFL--TRTASTPFRDLG 99
S+P L I +C QIHA I++ ++D + + L T+ RDL
Sbjct: 17 SSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD 76
Query: 100 YSRRFFSLLTNPFVSHYNAMLRAYSLS---RSPLEGLYMYRDMERQGVRADPLSSSFAVK 159
Y+ + F+ + +N ++R +S S ++ + Y M + V + + +K
Sbjct: 77 YAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136
Query: 160 SCIRLLSLFSGVQIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDA-------------- 219
+C + + G QIH G D ++++++ +Y CG ++DA
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196
Query: 220 ---------------------------CK----LFDEIPQRDVVAWNVLISCLTRNKRTR 279
CK LFD++ QR VV+WN +IS + N +
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 280 DALGLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNS 339
DA+ +F M+ K +P+ VT + +L A + L +LE GE +H Y + G + L ++
Sbjct: 257 DAVEVFREMK--KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 316
Query: 340 LISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPD 399
LI MYS+CG ++KA VF+++P +NV++WSA+I+G +++G +AI+ F +M++ GV P
Sbjct: 317 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 376
Query: 400 DHTFTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLV 459
D + +L+ACSH GLV+EGR F +M + P + HYGCMVDLLGR+G+LD+A + +
Sbjct: 377 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 436
Query: 460 MSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWD 519
++M + PD +W+ LLGACR+ G+ +G+R+ L+++ ++G YV L N+Y+S GNW
Sbjct: 437 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 496
Query: 520 KVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAG 579
+V+E+R MKEK I PGC+ I+++GV+HEF V+D SHP +I L EI+ +L++AG
Sbjct: 497 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 556
Query: 580 YEAEISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAK 622
Y + L L+ EDK L HSEK+A AFG+++T PG+ IR+ NLR C DCH+ K
Sbjct: 557 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 616
BLAST of Lsi06G014630 vs. ExPASy TrEMBL
Match:
A0A6J1E1Z3 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3662 GN=LOC111429841 PE=3 SV=1)
HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 569/629 (90.46%), Postives = 586/629 (93.16%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFAST--------SLLSSKFRQQNSTPHLEREPLISL 60
MTVIF RR S H H + L FAST SLLSSKFR+QNST +REPLISL
Sbjct: 1 MTVIF-RRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISL 60
Query: 61 IKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVS 120
IKSCTHK Q LQIHAH+IRTS IQDPIVSL FLTR S PFR+LGYSRRFFS LTNPFVS
Sbjct: 61 IKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVS 120
Query: 121 HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARI 180
HYN +LRAYSLSRSPLEGLYMYRDMER+GV ADPLSSSFAVKSCIR+LSLFSGVQIHARI
Sbjct: 121 HYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARI 180
Query: 181 FINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
F NGHQSDSLLLTSMMDLYSHCGK+EDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL
Sbjct: 181 FRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
Query: 241 GLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLIS 300
GLFEIMQSP YLC+PDKVTCLLLLQACADLNALEFGERIHS++QQHGYNTESNLCNSLIS
Sbjct: 241 GLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLIS 300
Query: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHT 360
MYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFW MQKKGVEPDDHT
Sbjct: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHT 360
Query: 361 FTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
FTAVLSACSHCGLVDEG A FDRMRQEF IVP VHHYGCMVDLLGRAGMLDQAYQLVMSM
Sbjct: 361 FTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
Query: 421 EVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
EVNPDAT+WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW KVT
Sbjct: 421 EVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVT 480
Query: 481 ELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
ELRKFMKE+GIYT+PGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA
Sbjct: 481 ELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
Query: 541 EISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYIS 600
EISSELH LKAEDKGYALS HSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKY+S
Sbjct: 541 EISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVS 600
Query: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
SVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 628
BLAST of Lsi06G014630 vs. ExPASy TrEMBL
Match:
A0A6J1JDE8 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=3661 GN=LOC111484807 PE=3 SV=1)
HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 564/629 (89.67%), Postives = 588/629 (93.48%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFAST--------SLLSSKFRQQNSTPHLEREPLISL 60
MTVIF RR S H H + L RFAST SLLSSKFRQQNST H +REPLISL
Sbjct: 1 MTVIF-RRCRCSAYRHPHSLRLPRFASTASLLHSPISLLSSKFRQQNSTLHFDREPLISL 60
Query: 61 IKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVS 120
IKSCTHK Q LQIHAH+IRTS IQDPIVSL FLTR S PFR+LGYSRRFFS LTNPFVS
Sbjct: 61 IKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVS 120
Query: 121 HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARI 180
HYN +LRAYSLSRSPLEGLYMYRDMERQGV ADPLSSSFA+KSCIR+LSLFSG+QIHARI
Sbjct: 121 HYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFALKSCIRMLSLFSGIQIHARI 180
Query: 181 FINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
F NGHQSDSLLLTSMMDLYSHCGK++DACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL
Sbjct: 181 FRNGHQSDSLLLTSMMDLYSHCGKLKDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
Query: 241 GLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLIS 300
GLFEIMQSP YLC+PDKVTCLLLLQACADLNALEFGERIHS++QQHGYNTESNLCNSLIS
Sbjct: 241 GLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLIS 300
Query: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHT 360
MYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFW MQKKGVEPDDHT
Sbjct: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHT 360
Query: 361 FTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
FTAVLSACSHCGLVDEG A FDRMRQEF IVP VHHYGCMVDLLGRAGMLDQAYQLVMSM
Sbjct: 361 FTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
Query: 421 EVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
EVNPDAT+WRTLLGACRIHGHANLGER+IEHL+ELKSQEAGDYVLLLNIYSSAGNWDKVT
Sbjct: 421 EVNPDATMWRTLLGACRIHGHANLGERVIEHLVELKSQEAGDYVLLLNIYSSAGNWDKVT 480
Query: 481 ELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
ELRKFMKE+GIYT+PGCTTIELNGVVHEFAVDDISHPMKDKIY+QLDEIN+QLKIAGYEA
Sbjct: 481 ELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIAGYEA 540
Query: 541 EISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYIS 600
EISSELH LKAEDKGYALS HSEKLAIAFGVLATPPG TIRVANNLRTC+DCHNFAKY+S
Sbjct: 541 EISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGGTIRVANNLRTCLDCHNFAKYVS 600
Query: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
SVYNRKVVVRDRS+FHHFREGRCSCNDYW
Sbjct: 601 SVYNRKVVVRDRSQFHHFREGRCSCNDYW 628
BLAST of Lsi06G014630 vs. ExPASy TrEMBL
Match:
A0A0A0LUH9 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G009750 PE=3 SV=1)
HSP 1 Score: 1122.5 bits (2902), Expect = 0.0e+00
Identity = 545/621 (87.76%), Postives = 570/621 (91.79%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFASTSLLSSKFRQQNSTPHLEREPLISLIKSCTHKC 60
M VIFR SILS K+HHH I S H EREPLISLIKSCTHK
Sbjct: 1 MCVIFRSPSILSLKYHHHSI-------------------SFSHFEREPLISLIKSCTHKS 60
Query: 61 QFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVSHYNAMLRA 120
Q LQIHAHII TSSIQDPIVSL FLTRTAS PFRDLGYSRR F LLTNPFVSHYNAMLRA
Sbjct: 61 QLLQIHAHIITTSSIQDPIVSLRFLTRTASAPFRDLGYSRRLFDLLTNPFVSHYNAMLRA 120
Query: 121 YSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARIFINGHQSD 180
YSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCI+LLSL G+QIHARIFINGHQ+D
Sbjct: 121 YSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQIHARIFINGHQAD 180
Query: 181 SLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQS 240
SLLLTSMMDLYSHCGK E+ACKLFDE+PQ+DVVAWNVLISCLTRNKRTRDALGLFEIMQS
Sbjct: 181 SLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRTRDALGLFEIMQS 240
Query: 241 PKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLISMYSRCGRV 300
P YLCQPDKVTCLLLLQACADLNALEFGERIH Y+QQHGYNTESNLCNSLISMYSRCGR+
Sbjct: 241 PTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHGYNTESNLCNSLISMYSRCGRM 300
Query: 301 DKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHTFTAVLSAC 360
DKAYEVFDKM EKNVVSWSA+ISGLSMNGHGREAIEAFWEMQK GVEP DHTFTAVLSAC
Sbjct: 301 DKAYEVFDKMTEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEPGDHTFTAVLSAC 360
Query: 361 SHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATL 420
SHCGLVDEG A FDRMRQEF I PNVHHYGC+VDLLGRAGMLDQAY+L+MSMEV PDAT+
Sbjct: 361 SHCGLVDEGMAFFDRMRQEFMIAPNVHHYGCIVDLLGRAGMLDQAYELIMSMEVRPDATM 420
Query: 421 WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKFMKE 480
WRTLLGACRIHGH NLGERI+EHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK MKE
Sbjct: 421 WRTLLGACRIHGHGNLGERIVEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKLMKE 480
Query: 481 KGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHR 540
KGIYT+P CTTIELNGVVH+FAVDDISHPMKDKIY+QLDEINKQLKIAGYEAE+SSELHR
Sbjct: 481 KGIYTTPCCTTIELNGVVHQFAVDDISHPMKDKIYKQLDEINKQLKIAGYEAEMSSELHR 540
Query: 541 LKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYISSVYNRKVV 600
L+ +DKGYALSNHSEKLAIAFGVLATPPGRTIR+ANN+RTCMDCHNFAKYISSVYNRKVV
Sbjct: 541 LEPKDKGYALSNHSEKLAIAFGVLATPPGRTIRIANNIRTCMDCHNFAKYISSVYNRKVV 600
Query: 601 VRDRSRFHHFREGRCSCNDYW 622
VRDRSRFHHF+EGRCSCND+W
Sbjct: 601 VRDRSRFHHFQEGRCSCNDFW 602
BLAST of Lsi06G014630 vs. ExPASy TrEMBL
Match:
A0A6J1C487 (pentatricopeptide repeat-containing protein At3g47530 OS=Momordica charantia OX=3673 GN=LOC111007242 PE=3 SV=1)
HSP 1 Score: 1109.0 bits (2867), Expect = 0.0e+00
Identity = 545/637 (85.56%), Postives = 579/637 (90.89%), Query Frame = 0
Query: 1 MTVIFRR---RSILSPKHHHHPIPLHRFAST--------SLLSSKFRQQNSTPH-----L 60
M V+FR+ R L+P+HH I L RFAST SL+SSKFRQ NST +
Sbjct: 1 MKVVFRQFLLRRSLNPQHH---ISLPRFASTASLLHSPKSLISSKFRQHNSTTRFSNAPI 60
Query: 61 EREPLISLIKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFS 120
EREPLISLIKSCTHK Q LQIHAHIIRTSSI+DPI++L FLTR A+ PFR+L YSRRFFS
Sbjct: 61 EREPLISLIKSCTHKPQLLQIHAHIIRTSSIKDPIIALRFLTRAATAPFRELDYSRRFFS 120
Query: 121 LLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFS 180
LTNP VSHYNAMLRAYSLSRSP +GLY+YRDMERQG+RADPLSSSFA+KSCIR+ SL S
Sbjct: 121 QLTNPSVSHYNAMLRAYSLSRSPQDGLYVYRDMERQGIRADPLSSSFAIKSCIRIFSLLS 180
Query: 181 GVQIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTR 240
GVQIHARIF NGHQSDSLLLT+MMDLYSHCGK+E+ACKLFDEIPQRDVVAWNVLISCLTR
Sbjct: 181 GVQIHARIFRNGHQSDSLLLTTMMDLYSHCGKLEEACKLFDEIPQRDVVAWNVLISCLTR 240
Query: 241 NKRTRDALGLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTES 300
NKRTRDALGLFEIMQSP YLCQPDKVTCLLLLQACADLNALEFGERIHSY+Q+ GY+TES
Sbjct: 241 NKRTRDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHSYIQERGYDTES 300
Query: 301 NLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKK 360
NLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFWEMQK
Sbjct: 301 NLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAIISGLSMNGHGREAIEAFWEMQKM 360
Query: 361 GVEPDDHTFTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQ 420
G+EPDD TFT VLSACSHCGLVDEG A FDRMR EF I PNVHHYGCMVDLLGRAGMLDQ
Sbjct: 361 GIEPDDRTFTGVLSACSHCGLVDEGMAFFDRMR-EFKIAPNVHHYGCMVDLLGRAGMLDQ 420
Query: 421 AYQLVMSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSS 480
AYQL MSME+NPDATLWRTLLGAC+IHGH NLGE II HLIE KSQEAGDYVLLLNIYSS
Sbjct: 421 AYQLAMSMEMNPDATLWRTLLGACKIHGHVNLGEHIIGHLIEAKSQEAGDYVLLLNIYSS 480
Query: 481 AGNWDKVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQ 540
AGNWDKVTELRKFMKE GIYT+P CTTIELNGVVHEFAVDD+SHPMKD+IYEQLDEINKQ
Sbjct: 481 AGNWDKVTELRKFMKENGIYTTPSCTTIELNGVVHEFAVDDVSHPMKDEIYEQLDEINKQ 540
Query: 541 LKIAGYEAEISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDC 600
LKIAGYE+EISSELH LKAE+KGYALS HSEKLAIAFGVLATPPGRTIRVANN+RTC+DC
Sbjct: 541 LKIAGYESEISSELHNLKAEEKGYALSCHSEKLAIAFGVLATPPGRTIRVANNIRTCVDC 600
Query: 601 HNFAKYISSVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
HNFAKY+SSVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 HNFAKYVSSVYNRKVVVRDRSRFHHFREGRCSCNDYW 633
BLAST of Lsi06G014630 vs. ExPASy TrEMBL
Match:
A0A1S3BV40 (pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN=LOC103493993 PE=3 SV=1)
HSP 1 Score: 1095.5 bits (2832), Expect = 0.0e+00
Identity = 526/573 (91.80%), Postives = 548/573 (95.64%), Query Frame = 0
Query: 49 LISLIKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTN 108
LISLIKSCTHK Q LQIHAHIIRTSSIQDPIVSL FLTRTAS PFRDLGYSRRF LLTN
Sbjct: 13 LISLIKSCTHKSQLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFLDLLTN 72
Query: 109 PFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQI 168
P VSHYNAMLRAYS+SRSPLEGLY+YRDMERQGVRADPLSSSFAVKSCI+LLSL G+QI
Sbjct: 73 PLVSHYNAMLRAYSVSRSPLEGLYVYRDMERQGVRADPLSSSFAVKSCIKLLSLLFGIQI 132
Query: 169 HARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRT 228
HARIFI GHQ+DSLLLTSMMDLYSHCGK E+ACKLFDE+PQ+DVVAWNVLISCLTRNKRT
Sbjct: 133 HARIFIYGHQADSLLLTSMMDLYSHCGKPEEACKLFDEVPQKDVVAWNVLISCLTRNKRT 192
Query: 229 RDALGLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCN 288
RDALGLFEIMQSP YLCQPDKVTCLLLLQACADLNALEFGERIH Y+QQH YNTESNLCN
Sbjct: 193 RDALGLFEIMQSPTYLCQPDKVTCLLLLQACADLNALEFGERIHGYIQQHCYNTESNLCN 252
Query: 289 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEP 348
SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFWEMQK GVEP
Sbjct: 253 SLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWEMQKNGVEP 312
Query: 349 DDHTFTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQL 408
DDHTFTAVLSACSHCGLVDEG A FDRMRQE I PNVHHYGC+VDLLGRAGMLDQAY+L
Sbjct: 313 DDHTFTAVLSACSHCGLVDEGMAFFDRMRQELMIAPNVHHYGCIVDLLGRAGMLDQAYEL 372
Query: 409 VMSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW 468
+MSMEV PDAT+WRTLLGACRIHGHANLGERI+EHLIELKSQEAGDYVLLLNIYSSAG W
Sbjct: 373 IMSMEVRPDATMWRTLLGACRIHGHANLGERIVEHLIELKSQEAGDYVLLLNIYSSAGKW 432
Query: 469 DKVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIA 528
DKVTELRK MKEKGIYT+P CTTIELNGVVHEFAVDDISHPMKDKIY+QLDEINKQLKIA
Sbjct: 433 DKVTELRKLMKEKGIYTTPCCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINKQLKIA 492
Query: 529 GYEAEISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFA 588
GYEAE+SSELHRLK EDKGYALSNHSEKLAIAFGVLATPPGRTIRVANN+RTCMDCHNFA
Sbjct: 493 GYEAEMSSELHRLKPEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNIRTCMDCHNFA 552
Query: 589 KYISSVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
KYISSVYNRKVV+RDRSRFHHF+EGRCSCND+W
Sbjct: 553 KYISSVYNRKVVLRDRSRFHHFQEGRCSCNDFW 585
BLAST of Lsi06G014630 vs. NCBI nr
Match:
XP_038879600.1 (pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879601.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879603.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879604.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879605.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879606.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >XP_038879607.1 pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida])
HSP 1 Score: 1184.1 bits (3062), Expect = 0.0e+00
Identity = 577/621 (92.91%), Postives = 595/621 (95.81%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFASTSLLSSKFRQQNSTPHLEREPLISLIKSCTHKC 60
MT IFRR SILSPKHHH HRFASTSLLSSKFRQQNSTPHLERE LISLIKSCTHK
Sbjct: 1 MTGIFRRHSILSPKHHH-----HRFASTSLLSSKFRQQNSTPHLERELLISLIKSCTHKS 60
Query: 61 QFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVSHYNAMLRA 120
Q LQIHAHIIRTSSIQDPIVSL FLTRTAS PFRDLGYSRRFFSLLTNPFVSHYNAMLRA
Sbjct: 61 QLLQIHAHIIRTSSIQDPIVSLRFLTRTASAPFRDLGYSRRFFSLLTNPFVSHYNAMLRA 120
Query: 121 YSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARIFINGHQSD 180
YSLS SPL+GLYMYRDMERQGVR DPLSSSFAVKSCIR+LSLFSGVQIHA+IF NGHQSD
Sbjct: 121 YSLSPSPLKGLYMYRDMERQGVRVDPLSSSFAVKSCIRMLSLFSGVQIHAKIFRNGHQSD 180
Query: 181 SLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQS 240
SLLLTSMMDLYSHCGK+EDACKLFDEIPQRDV+AWNVLISCLTRNKRTRDALGLF+IMQS
Sbjct: 181 SLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVIAWNVLISCLTRNKRTRDALGLFDIMQS 240
Query: 241 PKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLISMYSRCGRV 300
P YLC+PDKVTCLLLLQACADLNALEFGERIH+YVQQHGYNTESNLCNSLISMYS CGRV
Sbjct: 241 PTYLCEPDKVTCLLLLQACADLNALEFGERIHNYVQQHGYNTESNLCNSLISMYSLCGRV 300
Query: 301 DKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHTFTAVLSAC 360
DKAYEVFDKMPEK+VVSWSA+ISGLSMNG GREAIEAFWEMQKKG+EPDDHTFTAVLSAC
Sbjct: 301 DKAYEVFDKMPEKDVVSWSAMISGLSMNGQGREAIEAFWEMQKKGIEPDDHTFTAVLSAC 360
Query: 361 SHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATL 420
SHCGLVDEG A FDRMRQEF IVPNV+HYGCMVDLLGR GMLDQAY+L+MSMEVNPDATL
Sbjct: 361 SHCGLVDEGMAFFDRMRQEFRIVPNVYHYGCMVDLLGRTGMLDQAYKLIMSMEVNPDATL 420
Query: 421 WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKFMKE 480
WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKV+ELRKFMKE
Sbjct: 421 WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVSELRKFMKE 480
Query: 481 KGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHR 540
KGIYT+PGCTTIELNGVVHEFAVDDISHPMKDKIYE+LDEINKQLKIAGYEAEISSELHR
Sbjct: 481 KGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEKLDEINKQLKIAGYEAEISSELHR 540
Query: 541 LKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYISSVYNRKVV 600
LKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVAN + CMDCHNFAKYISSVYNRKVV
Sbjct: 541 LKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANTVHICMDCHNFAKYISSVYNRKVV 600
Query: 601 VRDRSRFHHFREGRCSCNDYW 622
VRDRSR HHFREGRCSCNDYW
Sbjct: 601 VRDRSRSHHFREGRCSCNDYW 616
BLAST of Lsi06G014630 vs. NCBI nr
Match:
KAG6589508.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023195.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1160.2 bits (3000), Expect = 0.0e+00
Identity = 570/629 (90.62%), Postives = 588/629 (93.48%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFAST--------SLLSSKFRQQNSTPHLEREPLISL 60
MTVIF RR S H H + L RFAST SLLSSKFR+QNST +REPLISL
Sbjct: 1 MTVIF-RRCRCSADRHLHSLRLPRFASTASLLHSPISLLSSKFREQNSTLRFDREPLISL 60
Query: 61 IKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVS 120
IKSCTHK Q LQIHAH+IRTS IQDPIVSL FLTR S PFR+LGYSRRFFS LTNPFVS
Sbjct: 61 IKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVS 120
Query: 121 HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARI 180
HYN +LRAYSLSRSPLEGLYMYRDMER+GV ADPLSSSFAVKSCIR+LSLFSGVQIHARI
Sbjct: 121 HYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARI 180
Query: 181 FINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
F NGHQSDSLLLTSMMDLYSHCGK+EDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL
Sbjct: 181 FRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
Query: 241 GLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLIS 300
GLFEIMQSP YLC+PDKVTCLLLLQACADLNALEFGERIHS++QQHGYNTESNLCNSLIS
Sbjct: 241 GLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLIS 300
Query: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHT 360
MYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFW MQKKGVEPDDHT
Sbjct: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHT 360
Query: 361 FTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
FTAVLSACSHCGLVDEG A FDRMRQEF IVP VHHYGCMVDLLGRAGMLDQAYQLVMSM
Sbjct: 361 FTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
Query: 421 EVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
EVNPDAT+WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT
Sbjct: 421 EVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
Query: 481 ELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
ELRKFMKE+GIYT+PGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA
Sbjct: 481 ELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
Query: 541 EISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYIS 600
EISSELH LKAEDKGYALS HSEKLAIAFG+LATPPGRTIRVANNLRTCMDCHNFAKY+S
Sbjct: 541 EISSELHNLKAEDKGYALSYHSEKLAIAFGILATPPGRTIRVANNLRTCMDCHNFAKYVS 600
Query: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
SVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 628
BLAST of Lsi06G014630 vs. NCBI nr
Match:
XP_023515406.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 568/629 (90.30%), Postives = 587/629 (93.32%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFAST--------SLLSSKFRQQNSTPHLEREPLISL 60
MTVIF RR S H H + L RFAST SLLSSKFR+QNST +REPLISL
Sbjct: 1 MTVIF-RRCRCSADRHLHSLRLPRFASTASLLHSPISLLSSKFREQNSTLRFDREPLISL 60
Query: 61 IKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVS 120
IKSCTHK Q LQIHAH+IRTS IQDPIVSL FLTR S PFR+LGYSRRFFS LTNPFVS
Sbjct: 61 IKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVS 120
Query: 121 HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARI 180
HYN +LRAYSLSRSPLEGLYMYRDMERQGV ADPLSSSFAVKSCIR+LSLFSG+QIHARI
Sbjct: 121 HYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFAVKSCIRMLSLFSGIQIHARI 180
Query: 181 FINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
F NGHQSDSLLLTSMMDLYSHCGK+EDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL
Sbjct: 181 FRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
Query: 241 GLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLIS 300
GLFEIMQSP YLC+PDKVTCLLLLQACADLNALEFGERIHSY+QQ+ YNTESNLCNSLIS
Sbjct: 241 GLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSYIQQNDYNTESNLCNSLIS 300
Query: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHT 360
MYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFW MQKKGVEPDDHT
Sbjct: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHT 360
Query: 361 FTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
FTAVLSACSHCGLVDEG A FDRMRQEF IVP VHHYGCMVDLLGRAGMLDQAYQLVMSM
Sbjct: 361 FTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
Query: 421 EVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
EVNPDAT+WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT
Sbjct: 421 EVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
Query: 481 ELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
ELRKFMKE+GIYT+PGCTTIELNGVVHEFAVDDISHPMKDKIY+QLDEIN+QLKIAGYEA
Sbjct: 481 ELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIAGYEA 540
Query: 541 EISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYIS 600
EISSELH LKAEDKGYALS HSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKY+S
Sbjct: 541 EISSELHNLKAEDKGYALSYHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVS 600
Query: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
SVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 628
BLAST of Lsi06G014630 vs. NCBI nr
Match:
XP_022921651.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata])
HSP 1 Score: 1154.8 bits (2986), Expect = 0.0e+00
Identity = 569/629 (90.46%), Postives = 586/629 (93.16%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFAST--------SLLSSKFRQQNSTPHLEREPLISL 60
MTVIF RR S H H + L FAST SLLSSKFR+QNST +REPLISL
Sbjct: 1 MTVIF-RRCRCSADRHLHSLRLPHFASTASLLHSPISLLSSKFREQNSTLRFDREPLISL 60
Query: 61 IKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVS 120
IKSCTHK Q LQIHAH+IRTS IQDPIVSL FLTR S PFR+LGYSRRFFS LTNPFVS
Sbjct: 61 IKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVS 120
Query: 121 HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARI 180
HYN +LRAYSLSRSPLEGLYMYRDMER+GV ADPLSSSFAVKSCIR+LSLFSGVQIHARI
Sbjct: 121 HYNTLLRAYSLSRSPLEGLYMYRDMERRGVHADPLSSSFAVKSCIRMLSLFSGVQIHARI 180
Query: 181 FINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
F NGHQSDSLLLTSMMDLYSHCGK+EDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL
Sbjct: 181 FRNGHQSDSLLLTSMMDLYSHCGKLEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
Query: 241 GLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLIS 300
GLFEIMQSP YLC+PDKVTCLLLLQACADLNALEFGERIHS++QQHGYNTESNLCNSLIS
Sbjct: 241 GLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLIS 300
Query: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHT 360
MYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFW MQKKGVEPDDHT
Sbjct: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHT 360
Query: 361 FTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
FTAVLSACSHCGLVDEG A FDRMRQEF IVP VHHYGCMVDLLGRAGMLDQAYQLVMSM
Sbjct: 361 FTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
Query: 421 EVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
EVNPDAT+WRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNW KVT
Sbjct: 421 EVNPDATMWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWVKVT 480
Query: 481 ELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
ELRKFMKE+GIYT+PGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA
Sbjct: 481 ELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
Query: 541 EISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYIS 600
EISSELH LKAEDKGYALS HSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKY+S
Sbjct: 541 EISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYVS 600
Query: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
SVYNRKVVVRDRSRFHHFREGRCSCNDYW
Sbjct: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 628
BLAST of Lsi06G014630 vs. NCBI nr
Match:
XP_022987181.1 (pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima])
HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 564/629 (89.67%), Postives = 588/629 (93.48%), Query Frame = 0
Query: 1 MTVIFRRRSILSPKHHHHPIPLHRFAST--------SLLSSKFRQQNSTPHLEREPLISL 60
MTVIF RR S H H + L RFAST SLLSSKFRQQNST H +REPLISL
Sbjct: 1 MTVIF-RRCRCSAYRHPHSLRLPRFASTASLLHSPISLLSSKFRQQNSTLHFDREPLISL 60
Query: 61 IKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTASTPFRDLGYSRRFFSLLTNPFVS 120
IKSCTHK Q LQIHAH+IRTS IQDPIVSL FLTR S PFR+LGYSRRFFS LTNPFVS
Sbjct: 61 IKSCTHKSQLLQIHAHMIRTSFIQDPIVSLRFLTRIVSAPFRELGYSRRFFSQLTNPFVS 120
Query: 121 HYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIRLLSLFSGVQIHARI 180
HYN +LRAYSLSRSPLEGLYMYRDMERQGV ADPLSSSFA+KSCIR+LSLFSG+QIHARI
Sbjct: 121 HYNTLLRAYSLSRSPLEGLYMYRDMERQGVHADPLSSSFALKSCIRMLSLFSGIQIHARI 180
Query: 181 FINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
F NGHQSDSLLLTSMMDLYSHCGK++DACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL
Sbjct: 181 FRNGHQSDSLLLTSMMDLYSHCGKLKDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDAL 240
Query: 241 GLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLIS 300
GLFEIMQSP YLC+PDKVTCLLLLQACADLNALEFGERIHS++QQHGYNTESNLCNSLIS
Sbjct: 241 GLFEIMQSPTYLCKPDKVTCLLLLQACADLNALEFGERIHSHIQQHGYNTESNLCNSLIS 300
Query: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHT 360
MYSRCGRVDKAYEVFDKMPEKNVVSWSA+ISGLSMNGHGREAIEAFW MQKKGVEPDDHT
Sbjct: 301 MYSRCGRVDKAYEVFDKMPEKNVVSWSAMISGLSMNGHGREAIEAFWAMQKKGVEPDDHT 360
Query: 361 FTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
FTAVLSACSHCGLVDEG A FDRMRQEF IVP VHHYGCMVDLLGRAGMLDQAYQLVMSM
Sbjct: 361 FTAVLSACSHCGLVDEGMAFFDRMRQEFMIVPTVHHYGCMVDLLGRAGMLDQAYQLVMSM 420
Query: 421 EVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVT 480
EVNPDAT+WRTLLGACRIHGHANLGER+IEHL+ELKSQEAGDYVLLLNIYSSAGNWDKVT
Sbjct: 421 EVNPDATMWRTLLGACRIHGHANLGERVIEHLVELKSQEAGDYVLLLNIYSSAGNWDKVT 480
Query: 481 ELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEA 540
ELRKFMKE+GIYT+PGCTTIELNGVVHEFAVDDISHPMKDKIY+QLDEIN+QLKIAGYEA
Sbjct: 481 ELRKFMKERGIYTTPGCTTIELNGVVHEFAVDDISHPMKDKIYKQLDEINQQLKIAGYEA 540
Query: 541 EISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYIS 600
EISSELH LKAEDKGYALS HSEKLAIAFGVLATPPG TIRVANNLRTC+DCHNFAKY+S
Sbjct: 541 EISSELHNLKAEDKGYALSFHSEKLAIAFGVLATPPGGTIRVANNLRTCLDCHNFAKYVS 600
Query: 601 SVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
SVYNRKVVVRDRS+FHHFREGRCSCNDYW
Sbjct: 601 SVYNRKVVVRDRSQFHHFREGRCSCNDYW 628
BLAST of Lsi06G014630 vs. TAIR 10
Match:
AT3G47530.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 733.4 bits (1892), Expect = 1.5e-211
Identity = 360/578 (62.28%), Postives = 448/578 (77.51%), Query Frame = 0
Query: 49 LISLIKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFLTRTA-STPFRDLGYSRRFFSLLT 108
L+SLI S T K QIHA ++RTS I++ V FL+R A S RD+ YS R FS
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 109 NPFVSHYNAMLRAYSLSRSPLEGLYMYRDMER-QGVRADPLSSSFAVKSCIRLLSLFSGV 168
NP +SH N M+RA+SLS++P EG ++R + R + A+PLSSSFA+K CI+ L G+
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 169 QIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNK 228
QIH +IF +G SDSLL+T++MDLYS C DACK+FDEIP+RD V+WNVL SC RNK
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 229 RTRDALGLFEIMQSPKYLC-QPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESN 288
RTRD L LF+ M++ C +PD VTCLL LQACA+L AL+FG+++H ++ ++G + N
Sbjct: 194 RTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN 253
Query: 289 LCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKG 348
L N+L+SMYSRCG +DKAY+VF M E+NVVSW+A+ISGL+MNG G+EAIEAF EM K G
Sbjct: 254 LSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFG 313
Query: 349 VEPDDHTFTAVLSACSHCGLVDEGRALFDRMRQ-EFTIVPNVHHYGCMVDLLGRAGMLDQ 408
+ P++ T T +LSACSH GLV EG FDRMR EF I PN+HHYGC+VDLLGRA +LD+
Sbjct: 314 ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDK 373
Query: 409 AYQLVMSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSS 468
AY L+ SME+ PD+T+WRTLLGACR+HG LGER+I HLIELK++EAGDYVLLLN YS+
Sbjct: 374 AYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYST 433
Query: 469 AGNWDKVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQ 528
G W+KVTELR MKEK I+T PGC+ IEL G VHEF VDD+SHP K++IY+ L EIN+Q
Sbjct: 434 VGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQ 493
Query: 529 LKIAGYEAEISSELHRLKA-EDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMD 588
LKIAGY AEI+SELH L++ E+KGYAL HSEKLAIAFG+L TPPG TIRV NLRTC+D
Sbjct: 494 LKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVD 553
Query: 589 CHNFAKYISSVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
CHNFAK++S VY+R V+VRDRSRFHHF+ G CSCND+W
Sbjct: 554 CHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
BLAST of Lsi06G014630 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 458.8 bits (1179), Expect = 7.1e-129
Identity = 224/559 (40.07%), Postives = 350/559 (62.61%), Query Frame = 0
Query: 95 DLGYSRRFFSLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVK 154
DL + + F+ + V +N+M+ + SP + L +++ ME + V+A ++ +
Sbjct: 181 DLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLS 240
Query: 155 SCIRLLSLFSGVQIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFD--------- 214
+C ++ +L G Q+ + I N + L +M+D+Y+ CG IEDA +LFD
Sbjct: 241 ACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVT 300
Query: 215 ----------------------EIPQRDVVAWNVLISCLTRNKRTRDALGLFEIMQSPKY 274
+PQ+D+VAWN LIS +N + +AL +F +Q K
Sbjct: 301 WTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKN 360
Query: 275 LCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLISMYSRCGRVDKA 334
+ + +++T + L ACA + ALE G IHSY+++HG ++ ++LI MYS+CG ++K+
Sbjct: 361 M-KLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKS 420
Query: 335 YEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPDDHTFTAVLSACSHC 394
EVF+ + +++V WSA+I GL+M+G G EA++ F++MQ+ V+P+ TFT V ACSH
Sbjct: 421 REVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHT 480
Query: 395 GLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNPDATLWRT 454
GLVDE +LF +M + IVP HY C+VD+LGR+G L++A + + +M + P ++W
Sbjct: 481 GLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGA 540
Query: 455 LLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRKFMKEKGI 514
LLGAC+IH + NL E L+EL+ + G +VLL NIY+ G W+ V+ELRK M+ G+
Sbjct: 541 LLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGL 600
Query: 515 YTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISSELHRLKA 574
PGC++IE++G++HEF D +HPM +K+Y +L E+ ++LK GYE EIS L ++
Sbjct: 601 KKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEE 660
Query: 575 ED-KGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYISSVYNRKVVVR 622
E+ K +L+ HSEKLAI +G+++T + IRV NLR C DCH+ AK IS +Y+R+++VR
Sbjct: 661 EEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVR 720
BLAST of Lsi06G014630 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 458.0 bits (1177), Expect = 1.2e-128
Identity = 216/526 (41.06%), Postives = 339/526 (64.45%), Query Frame = 0
Query: 99 SRRFFSLLTNPFVSHYNAMLRAYSLSRSPLEGLYMYRDMERQGVRADPLSSSFAVKSCIR 158
+++ F + V +NAM+ Y+ + + E L +++DM + VR D + V +C +
Sbjct: 219 AQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQ 278
Query: 159 LLSLFSGVQIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVL 218
S+ G Q+H I +G S+ ++ +++DLYS CG++E AC LF+ +P +DV++WN L
Sbjct: 279 SGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTL 338
Query: 219 ISCLTRNKRTRDALGLF-EIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQ 278
I T ++AL LF E+++S + P+ VT L +L ACA L A++ G IH Y+ +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGE---TPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 398
Query: 279 H--GYNTESNLCNSLISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAI 338
G S+L SLI MY++CG ++ A++VF+ + K++ SW+A+I G +M+G +
Sbjct: 399 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 458
Query: 339 EAFWEMQKKGVEPDDHTFTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDL 398
+ F M+K G++PDD TF +LSACSH G++D GR +F M Q++ + P + HYGCM+DL
Sbjct: 459 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDL 518
Query: 399 LGRAGMLDQAYQLVMSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDY 458
LG +G+ +A +++ ME+ PD +W +LL AC++HG+ LGE E+LI+++ + G Y
Sbjct: 519 LGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSY 578
Query: 459 VLLLNIYSSAGNWDKVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIY 518
VLL NIY+SAG W++V + R + +KG+ PGC++IE++ VVHEF + D HP +IY
Sbjct: 579 VLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIY 638
Query: 519 EQLDEINKQLKIAGYEAEISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVA 578
L+E+ L+ AG+ + S L ++ E K AL +HSEKLAIAFG+++T PG + +
Sbjct: 639 GMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIV 698
Query: 579 NNLRTCMDCHNFAKYISSVYNRKVVVRDRSRFHHFREGRCSCNDYW 622
NLR C +CH K IS +Y R+++ RDR+RFHHFR+G CSCNDYW
Sbjct: 699 KNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
BLAST of Lsi06G014630 vs. TAIR 10
Match:
AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 449.1 bits (1154), Expect = 5.7e-126
Identity = 231/565 (40.88%), Postives = 345/565 (61.06%), Query Frame = 0
Query: 64 QIHAHIIRTS-SIQDPIVS---LCFLTRTASTPFRDLGYSRRFFSLLTNPF-VSHYNAML 123
QIHA IR SI D + + +L S P + Y+ + FS + P V +N ++
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSPP--PMSYAHKVFSKIEKPINVFIWNTLI 94
Query: 124 RAYSLSRSPLEGLYMYRDMERQG-VRADPLSSSFAVKSCIRLLSLFSGVQIHARIFINGH 183
R Y+ + + +YR+M G V D + F +K+ + + G IH+ + +G
Sbjct: 95 RGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGF 154
Query: 184 QSDSLLLTSMMDLYSHCGKIEDACKLFDEIPQRDVVAWNVLISCLTRNKRTRDALGLFEI 243
S + S++ LY++CG + A K+FD++P++D+VAWN +I+ N + +AL L+
Sbjct: 155 GSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTE 214
Query: 244 MQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNSLISMYSRC 303
M S +PD T + LL ACA + AL G+R+H Y+ + G + N L+ +Y+RC
Sbjct: 215 MNSKG--IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC 274
Query: 304 GRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQK-KGVEPDDHTFTAV 363
GRV++A +FD+M +KN VSW+++I GL++NG G+EAIE F M+ +G+ P + TF +
Sbjct: 275 GRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 334
Query: 364 LSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLVMSMEVNP 423
L ACSHCG+V EG F RMR+E+ I P + H+GCMVDLL RAG + +AY+ + SM + P
Sbjct: 335 LYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQP 394
Query: 424 DATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWDKVTELRK 483
+ +WRTLLGAC +HG ++L E +++L+ +GDYVLL N+Y+S W V ++RK
Sbjct: 395 NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRK 454
Query: 484 FMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAGYEAEISS 543
M G+ PG + +E+ VHEF + D SHP D IY +L E+ +L+ GY +IS+
Sbjct: 455 QMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISN 514
Query: 544 ELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAKYISSVYN 603
++ E+K A+ HSEK+AIAF +++TP I V NLR C DCH K +S VYN
Sbjct: 515 VYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYN 574
Query: 604 RKVVVRDRSRFHHFREGRCSCNDYW 622
R++VVRDRSRFHHF+ G CSC DYW
Sbjct: 575 REIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of Lsi06G014630 vs. TAIR 10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 443.7 bits (1140), Expect = 2.4e-124
Identity = 231/632 (36.55%), Postives = 361/632 (57.12%), Query Frame = 0
Query: 40 STPHLEREPLISLIKSCTHKCQFLQIHAHIIRTSSIQDPIVSLCFL--TRTASTPFRDLG 99
S+P L I +C QIHA I++ ++D + + L T+ RDL
Sbjct: 17 SSPASHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLD 76
Query: 100 YSRRFFSLLTNPFVSHYNAMLRAYSLS---RSPLEGLYMYRDMERQGVRADPLSSSFAVK 159
Y+ + F+ + +N ++R +S S ++ + Y M + V + + +K
Sbjct: 77 YAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLK 136
Query: 160 SCIRLLSLFSGVQIHARIFINGHQSDSLLLTSMMDLYSHCGKIEDA-------------- 219
+C + + G QIH G D ++++++ +Y CG ++DA
Sbjct: 137 ACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMV 196
Query: 220 ---------------------------CK----LFDEIPQRDVVAWNVLISCLTRNKRTR 279
CK LFD++ QR VV+WN +IS + N +
Sbjct: 197 VMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFK 256
Query: 280 DALGLFEIMQSPKYLCQPDKVTCLLLLQACADLNALEFGERIHSYVQQHGYNTESNLCNS 339
DA+ +F M+ K +P+ VT + +L A + L +LE GE +H Y + G + L ++
Sbjct: 257 DAVEVFREMK--KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSA 316
Query: 340 LISMYSRCGRVDKAYEVFDKMPEKNVVSWSAVISGLSMNGHGREAIEAFWEMQKKGVEPD 399
LI MYS+CG ++KA VF+++P +NV++WSA+I+G +++G +AI+ F +M++ GV P
Sbjct: 317 LIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 376
Query: 400 DHTFTAVLSACSHCGLVDEGRALFDRMRQEFTIVPNVHHYGCMVDLLGRAGMLDQAYQLV 459
D + +L+ACSH GLV+EGR F +M + P + HYGCMVDLLGR+G+LD+A + +
Sbjct: 377 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI 436
Query: 460 MSMEVNPDATLWRTLLGACRIHGHANLGERIIEHLIELKSQEAGDYVLLLNIYSSAGNWD 519
++M + PD +W+ LLGACR+ G+ +G+R+ L+++ ++G YV L N+Y+S GNW
Sbjct: 437 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 496
Query: 520 KVTELRKFMKEKGIYTSPGCTTIELNGVVHEFAVDDISHPMKDKIYEQLDEINKQLKIAG 579
+V+E+R MKEK I PGC+ I+++GV+HEF V+D SHP +I L EI+ +L++AG
Sbjct: 497 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAG 556
Query: 580 YEAEISSELHRLKAEDKGYALSNHSEKLAIAFGVLATPPGRTIRVANNLRTCMDCHNFAK 622
Y + L L+ EDK L HSEK+A AFG+++T PG+ IR+ NLR C DCH+ K
Sbjct: 557 YRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIK 616
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SN85 | 2.1e-210 | 62.28 | Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 1.0e-127 | 40.07 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9LN01 | 1.7e-127 | 41.06 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
A8MQA3 | 8.0e-125 | 40.88 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX... | [more] |
Q9FI80 | 3.3e-123 | 36.55 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1E1Z3 | 0.0e+00 | 90.46 | pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita moschata OX=3... | [more] |
A0A6J1JDE8 | 0.0e+00 | 89.67 | pentatricopeptide repeat-containing protein At3g47530 OS=Cucurbita maxima OX=366... | [more] |
A0A0A0LUH9 | 0.0e+00 | 87.76 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0097... | [more] |
A0A6J1C487 | 0.0e+00 | 85.56 | pentatricopeptide repeat-containing protein At3g47530 OS=Momordica charantia OX=... | [more] |
A0A1S3BV40 | 0.0e+00 | 91.80 | pentatricopeptide repeat-containing protein At3g47530 OS=Cucumis melo OX=3656 GN... | [more] |
Match Name | E-value | Identity | Description | |
XP_038879600.1 | 0.0e+00 | 92.91 | pentatricopeptide repeat-containing protein At3g47530-like [Benincasa hispida] >... | [more] |
KAG6589508.1 | 0.0e+00 | 90.62 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_023515406.1 | 0.0e+00 | 90.30 | pentatricopeptide repeat-containing protein At3g47530 [Cucurbita pepo subsp. pep... | [more] |
XP_022921651.1 | 0.0e+00 | 90.46 | pentatricopeptide repeat-containing protein At3g47530 [Cucurbita moschata] | [more] |
XP_022987181.1 | 0.0e+00 | 89.67 | pentatricopeptide repeat-containing protein At3g47530 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT3G47530.1 | 1.5e-211 | 62.28 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G29760.1 | 7.1e-129 | 40.07 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G08070.1 | 1.2e-128 | 41.06 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G21065.1 | 5.7e-126 | 40.88 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G48910.1 | 2.4e-124 | 36.55 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |