Lsi06G012670 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G012670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pollen preferential protein
Location	chr06: 23248468 .. 23248923 (+)
RNA-Seq Expression	Lsi06G012670
Synteny	Lsi06G012670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGGTGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGATGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGTTTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATGAGTAA

mRNA sequence

ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGGTGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGATGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGTTTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATGAGTAA

Coding sequence (CDS)

ATGGCTCGGAAGGTCCTCCTCCGATCTCCGGCTATGCGTCATAGATCGCCGCTGAAAGACGAGAAAATCGATGCGCCACGAGAGAAACGGCAGTTCGCGGAGGTAGCTGGTGGTTCAGCGGCAGAATGTACGGCGATTTGCTGCTGTTGTCCATGGACGGTGTTGAATATCGTGATCTTTGCCGTCTACCGGATGCCGGCGGGGCTCTGCCGGAAAGCGATGAACAAAAGAAAACGACACCGTAAAATGAAGAAAAAATATCTCATTCAGCAACGAAAGGCCGCCTCTATGGATTTCACAGATGGATCGGTGGGGCCCGCAACGGAGAGTTTTGAGGCCCACAAAACGACGAATGACGTGGCAGATGTCGAAGATTTGAAGAAGTTAGAAGAGGAAATGTGGGGCCGGTTCAACCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGACATGAGTAA

Protein sequence

MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE

Homology

[Close]

BLAST of Lsi06G012670 vs. ExPASy TrEMBL
Match: A0A0A0LV48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 4.9e-63
Identity = 122/151 (80.79%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRSPL+D KIDAPRE+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF
Sbjct: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           A+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKAAS DFTDGSVGP  + +  H+  NDV
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHE-ANDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
           A  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Sbjct: 121 AAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of Lsi06G012670 vs. ExPASy TrEMBL
Match: A0A5D3DY75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G001510 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61
Identity = 119/146 (81.51%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI IF
Sbjct: 1   MTRKVLLRSQAVRHRSSLQDGKIDAPQERRQFAEVAGGSAAECTAVCCCCPWTVLNIFIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           A+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFTDGSVGP  +SF  H+ TNDV
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAVAMDFTDGSVGPIIDSFGTHE-TNDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSS 147
           AD EDLKKLEEEMWGRF+QTGFWR+S
Sbjct: 121 ADSEDLKKLEEEMWGRFSQTGFWRTS 145

[Close]

BLAST of Lsi06G012670 vs. ExPASy TrEMBL
Match: A0A5A7UQK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004700 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.5e-61
Identity = 118/146 (80.82%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF
Sbjct: 1   MTRKVLLRSQAVRHRSSLQDGKIDAPQERRQFAEVAGGSAAECTAVCCCCPWTVLNILIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           ++YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFTDGSVGP  +SF  H+ TNDV
Sbjct: 61  SIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAVAMDFTDGSVGPIIDSFGTHQ-TNDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSS 147
           AD EDLKKLEEEMWGRF+QTGFWR+S
Sbjct: 121 ADSEDLKKLEEEMWGRFSQTGFWRTS 145

[Close]

BLAST of Lsi06G012670 vs. ExPASy TrEMBL
Match: A0A6J1F6E1 (uncharacterized protein LOC111441234 OS=Cucurbita moschata OX=3662 GN=LOC111441234 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.6e-56
Identity = 116/152 (76.32%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 1   MARKVLLRSPAM-RHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVI 60
           MARKVLLRS A+ R  S  K EK DA R+KRQFAE+AGGSAA+CT ICCCCPWTV+N+VI
Sbjct: 1   MARKVLLRSQAIERQSSSQKSEKSDASRDKRQFAELAGGSAADCTIICCCCPWTVMNLVI 60

Query: 61  FAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTND 120
           FAVYRMP GLCRKAMN+RKRHR++K+K LIQQRKAAS +F D SV PA ESFEA K  ND
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRHRRLKRKCLIQQRKAASQEFEDASVEPALESFEATKQAND 120

Query: 121 VADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
            A  ED+ KLEEEMWGRFNQTGFWRSSSQRHE
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of Lsi06G012670 vs. ExPASy TrEMBL
Match: A0A6J1BZB0 (uncharacterized protein LOC111006972 OS=Momordica charantia OX=3673 GN=LOC111006972 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.1e-46
Identity = 106/155 (68.39%), Postives = 121/155 (78.06%), Query Frame = 0


Query: 1   MARKVLLRSPAMRH-RSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVI 60
           M  KVLLRSPA+ H +S LKDEK+DAPRE+RQFAEVAGGSAAECTAICCCCP TV+NIVI
Sbjct: 1   MTGKVLLRSPAIGHYKSSLKDEKLDAPRERRQFAEVAGGSAAECTAICCCCPLTVMNIVI 60

Query: 61  FAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGP-ATESFEAHKTTN 120
           FA+Y+MPAGLCRKA+  RKRH KMKKK LIQQR+ AS +FTDGS GP     F+      
Sbjct: 61  FAIYKMPAGLCRKALKSRKRHGKMKKKRLIQQRRGASQEFTDGSEGPGGIGGFDQVPPQV 120

Query: 121 DVAD-----VEDLKKLEEEMWGRFNQTGFWRSSSQ 149
             A+      +DL  LEEEMWG+F+QTGFWRSSSQ
Sbjct: 121 PGAEPGPKSADDLIHLEEEMWGQFSQTGFWRSSSQ 155

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: XP_038879203.1 (uncharacterized protein LOC120071168 [Benincasa hispida])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 135/152 (88.82%), Postives = 139/152 (91.45%), Query Frame = 0


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRSPAMRH S   DEKIDAP+E+RQFAEVAGGSAAECTAICCCCPWTV+NIVIF
Sbjct: 1   MTRKVLLRSPAMRHES---DEKIDAPQERRQFAEVAGGSAAECTAICCCCPWTVMNIVIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVG-PATESFEAHKTTND 120
           AVYRMPAGLCRKAMN+RKRHRKMKKK LIQQRKA SMDFTDGSVG P  ES EAHK  ND
Sbjct: 61  AVYRMPAGLCRKAMNRRKRHRKMKKKCLIQQRKAVSMDFTDGSVGPPPMESVEAHKRPND 120

Query: 121 VADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
           VADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE
Sbjct: 121 VADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 149

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: KGN63891.1 (hypothetical protein Csa_014343 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.0e-62
Identity = 122/151 (80.79%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRSPL+D KIDAPRE+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF
Sbjct: 1   MTRKVLLRSAAIRHRSPLRDGKIDAPRERRQFAEVAGGSAAECTAVCCCCPWTVLNILIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           A+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKAAS DFTDGSVGP  + +  H+  NDV
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAASEDFTDGSVGPIIDGYGTHE-ANDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
           A  EDLKKLE+EMWGRF+QTGFWRSSSQRH+
Sbjct: 121 AAGEDLKKLEDEMWGRFSQTGFWRSSSQRHK 150

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: TYK28512.1 (hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 244.6 bits (623), Expect = 5.5e-61
Identity = 119/146 (81.51%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI IF
Sbjct: 1   MTRKVLLRSQAVRHRSSLQDGKIDAPQERRQFAEVAGGSAAECTAVCCCCPWTVLNIFIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           A+YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFTDGSVGP  +SF  H+ TNDV
Sbjct: 61  AIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAVAMDFTDGSVGPIIDSFGTHE-TNDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSS 147
           AD EDLKKLEEEMWGRF+QTGFWR+S
Sbjct: 121 ADSEDLKKLEEEMWGRFSQTGFWRTS 145

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: KAA0058153.1 (hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa])

HSP 1 Score: 244.2 bits (622), Expect = 7.2e-61
Identity = 118/146 (80.82%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MARKVLLRSPAMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVIF 60
           M RKVLLRS A+RHRS L+D KIDAP+E+RQFAEVAGGSAAECTA+CCCCPWTVLNI+IF
Sbjct: 1   MTRKVLLRSQAVRHRSSLQDGKIDAPQERRQFAEVAGGSAAECTAVCCCCPWTVLNILIF 60

Query: 61  AVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTNDV 120
           ++YRMPAGLCRKA+N+RKRHR+MK+KYLIQQRKA +MDFTDGSVGP  +SF  H+ TNDV
Sbjct: 61  SIYRMPAGLCRKAINRRKRHRRMKRKYLIQQRKAVAMDFTDGSVGPIIDSFGTHQ-TNDV 120

Query: 121 ADVEDLKKLEEEMWGRFNQTGFWRSS 147
           AD EDLKKLEEEMWGRF+QTGFWR+S
Sbjct: 121 ADSEDLKKLEEEMWGRFSQTGFWRTS 145

[Close]

BLAST of Lsi06G012670 vs. NCBI nr
Match: XP_022933995.1 (uncharacterized protein LOC111441234 [Cucurbita moschata])

HSP 1 Score: 228.0 bits (580), Expect = 5.4e-56
Identity = 116/152 (76.32%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 1   MARKVLLRSPAM-RHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPWTVLNIVI 60
           MARKVLLRS A+ R  S  K EK DA R+KRQFAE+AGGSAA+CT ICCCCPWTV+N+VI
Sbjct: 1   MARKVLLRSQAIERQSSSQKSEKSDASRDKRQFAELAGGSAADCTIICCCCPWTVMNLVI 60

Query: 61  FAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFEAHKTTND 120
           FAVYRMP GLCRKAMN+RKRHR++K+K LIQQRKAAS +F D SV PA ESFEA K  ND
Sbjct: 61  FAVYRMPLGLCRKAMNRRKRHRRLKRKCLIQQRKAASQEFEDASVEPALESFEATKQAND 120

Query: 121 VADVEDLKKLEEEMWGRFNQTGFWRSSSQRHE 152
            A  ED+ KLEEEMWGRFNQTGFWRSSSQRHE
Sbjct: 121 AAHGEDMNKLEEEMWGRFNQTGFWRSSSQRHE 152

[Close]

BLAST of Lsi06G012670 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 89.4 bits (220), Expect = 2.8e-18
Identity = 57/166 (34.34%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 1   MARKVLLRSP--------AMRHRSPLKDEKIDAPREKRQFAEVAGGSAAECTAICCCCPW 60
           M R V+L+SP         MR+  P         +E+R+  EVAGG+AAEC A+ CCCP 
Sbjct: 1   MTRHVILKSPLLVSSEESTMRNSPP---STTSLSKERRKVGEVAGGAAAECAAVWCCCPC 60

Query: 61  TVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQRKAASMDFTDGSVGPATESFE 120
            V+N+++ AVY++PA +C+KA  + KR R  +K++ +     A     +GS         
Sbjct: 61  AVVNLMVLAVYKVPAAVCKKAWRRSKRRRFTRKRHGLLASATA-----EGSESTVHARLN 120

Query: 121 AHKTTNDV---------ADVEDLKKLEEEMWGRFNQTGFWRSSSQR 150
               T ++          ++ D+ +LE EM  RF   GFWRS SQ+
Sbjct: 121 EEDLTAEIVFEECHVSGGELNDVVRLENEMLDRFYGAGFWRSPSQK 158

[Close]

BLAST of Lsi06G012670 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 3.4e-16
Identity = 45/116 (38.79%), Postives = 68/116 (58.62%), Query Frame = 0


Query: 33  AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGLCRKAMNKRKRHRKMKKKYLIQQR 92
           AE  GG+ A C A+C C P +V+N+V+ AVY++P GLCR+A+ + +R R  KK+++   R
Sbjct: 24  AECCGGTTASCAALCLCAPCSVVNLVVLAVYKLPRGLCRRAIRRIRRKRLAKKEFVESGR 83

Query: 93  KAASMDFTDGSVGPATESFEAHKTTNDVADVEDLKKLEEEMWGRFNQTGFWRSSSQ 149
           +      +  +V P     E  +   +  + E +  LE+EMW RF   GFWRS SQ
Sbjct: 84  EFGRGGSSQFAVHPLESRDEEEE---EEEEDEAVIALEKEMWSRFYSGGFWRSLSQ 136

[Close]

BLAST of Lsi06G012670 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 7.1e-14
Identity = 50/169 (29.59%), Postives = 80/169 (47.34%), Query Frame = 0


Query: 15  RSPLKDEKIDAPREKRQF-----AEVAGGSAAECTAICCCCPWTVLNIVIFAVYRMPAGL 74
           R PL    + +P  +        AE  GG+ A C A+ CCCP  ++N+++ A+Y++P G+
Sbjct: 32  RQPLLQRSLSSPSPRASCGGSTPAEFCGGTTASCAAVWCCCPCGLVNLLVLAIYKVPKGI 91

Query: 75  CRKAMNKRKR-----------------HRKMKKKYLIQQRKAASMDFTDGSVGPATESFE 134
           CR+A+  R+R                 + +M++ +   +     +D  D S     ++F 
Sbjct: 92  CRRAIRSRRRKQLVKNGILPPLPTDGKNERMQRVFQNSEFAIHPLDSDDVSDDEDDDNFL 151

Query: 135 AHK----------TTNDVADVED--LKKLEEEMWGRFNQTGFWRSSSQR 150
             K          TT +  D +D  +  LE+EMW RF   GFWRS SQR
Sbjct: 152 DLKYIGKSVATGFTTEEETDEDDEAVLALEKEMWNRFYGAGFWRSPSQR 200

The following BLAST results are available for this feature:

BLAST of Lsi06G012670 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi06G012670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LV48	4.9e-63	80.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025240 PE=4 SV=1	[more]
A0A5D3DY75	2.7e-61	81.51	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UQK6	3.5e-61	80.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A6J1F6E1	2.6e-56	76.32	uncharacterized protein LOC111441234 OS=Cucurbita moschata OX=3662 GN=LOC1114412...	[more]
A0A6J1BZB0	1.1e-46	68.39	uncharacterized protein LOC111006972 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]

BLAST of Lsi06G012670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879203.1	1.1e-66	88.82	uncharacterized protein LOC120071168 [Benincasa hispida]	[more]
KGN63891.1	1.0e-62	80.79	hypothetical protein Csa_014343 [Cucumis sativus]	[more]
TYK28512.1	5.5e-61	81.51	hypothetical protein E5676_scaffold629G001510 [Cucumis melo var. makuwa]	[more]
KAA0058153.1	7.2e-61	80.82	hypothetical protein E6C27_scaffold274G004700 [Cucumis melo var. makuwa]	[more]
XP_022933995.1	5.4e-56	76.32	uncharacterized protein LOC111441234 [Cucurbita moschata]	[more]

BLAST of Lsi06G012670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27180.1	2.8e-18	34.34	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06380.1	3.4e-16	38.79	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G11690.1	7.1e-14	29.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR33264:SF36	SUBFAMILY NOT NAMED	coord: 1..151
None	No IPR available	PANTHER	PTHR33264	EXPRESSED PROTEIN	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G012670.1	Lsi06G012670.1	mRNA