Lsi06G011850 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G011850
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein
Location	chr06: 22139952 .. 22142341 (-)
RNA-Seq Expression	Lsi06G011850
Synteny	Lsi06G011850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATTGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCACCGTGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCGGGACCGTGAACGGCGTAGGGATCAGGAAGACCGTGACCGTGAAAGGGAGCGTGGTCGGGGTAAAAGGTCACACACTCCTGACCGCGACAGATCCCGCCATACACGCTCTCGCACTCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCACGCTCGGAAGCGTCATCGACAGGATTTGACTGGGGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCGTTGATGGCATCGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAAGATGAAATTGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGAAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACCAAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGGTAGCTATCGATTTGGCTAGGTCACCGAGGTTAGTCTATTGTAGATGTATTATTTCCCATTTTTTGATTTTTTTTCTCATATGGTGGTGTTTGGGATTTATTAGCTCCGCTTATAATCTGAAAATAAATGTAATTACTGTGGTTGATAAGGACATATTGAACTGTTGTAACAATTGAATAGCTTAGTCCACTGCCTTCTTCCTTGAAGTTTAAGCAACAACTTTGCTTGTTGCCAGATTCTTATTATAATCTCTGGAACGAGAGTGTTTTTGTATTTGTACAGAGTCTAGATTGTAGCCTTCTCCCTGACATTCGGTTTTAATAGTCAGATTAATGTGTTAATTAATTGTGCACTGTGTTTCTATACTCCACTTCCTAGTCACTTATAATTTTATAGATGTTCAATGGGATATCTGAATATATCGTCATCCTTGAGGCTCTGACTAAAGTACTTGACATCTATACTCCTGAGAATGCTCCTTAGAGAGGACACTAGTTTCTTTGTCAATTTCATCCGTTTAGGAGGGTTTTTAGACTCATGTTACCAGTAGTTATTTAACGGTGGAGTTATGAACTTTTCTCACATTTCAAAATATCACCAAATAGTTGATCTTCATTGGTACCATTTTTCTTGTACAAGAGTTGAAGAGAGGGTCACGCTCTAACTAGTATAATCAAAGAGAACTTGAAGAACCCCAAAATTTTATTGAACATATTTTGGCATTTAGATTTTAAAATTATATTTGTAAAATTCCTAATCCAGTTTAGGAAACATTGTGATGTACTTCTATGGATGTGTTATAGGGAGGAAGCTCCTTGTATCAAAATATTGATCCTATATTGATCTTATGTTTATGGTAGCTTGGCATGTCAATTTCTTATTTGAGTTAGTTTGTTTATGTACTTTGAGCCAACGTTGGAAGTTCAAAAGTAATGAATTTAGGAATATATTCAGACTTGCTGATATATGAAATATGATTTAGTTTTTCATCGAAATAAAGAAAAGTTGTAAGAGTTGTTGGCTGAAACTTACAAGGATGGTAAAATAATGAGACTGAGCATAACTCTTCGTTGCTTTCAGTGCAGCAACCAAGACTGACATTCTTCGTGAGATATCATTCAGCTGTGGGAGATGCATGCAGATCAGGCTATTGCGATGTGCTAGAGCATATTCTGGTAATAAAATCTTGTTACTGGATGTGTTTCCTGCTTAATCTGAAGTTTCTGATATAGCCCAAATACTAGGCTCGAGTATCATGAGGGAGAACCAAGTGGTTTAGGCAGAGTTTTAGTTCCCAACTTCTGGAGTTGGTCGTACCCAAACTATATATTTGCTTAGGTGAAGGTCAGAAGTGTATTAACTGATCTCAACCCGAAAAAAAGGGGTGCTAACTTCAGCTAGGTATCCACATCCGTTCTCTATGTTGTTCTTCTCTACAAAAGTTTACTTCTTCGTTTTTACTAGAACTCCTAAATTCACACCCTAACCTCCAAAATTGTGTCCATGAAGCAACTACTTGTGATTTTCCTCTGCATTCAAGTGGAACAGGAATACCCTAGGGACACTCTCAAATTTCAGAAGCCCCACCCCACAAGATGGATTATATTGGCAGTGGATATATAAATGGATTTGATTTTCTATACCAGCAAAATAGAGCACACACCAATTTGGATTTCAAATCCTTGGCTGTCTTACGCGTACCC

mRNA sequence

ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATTGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCACCGTGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCGGGACCGTGAACGGCGTAGGGATCAGGAAGACCGTGACCGTGAAAGGGAGCGTGGTCGGGGTAAAAGGTCACACACTCCTGACCGCGACAGATCCCGCCATACACGCTCTCGCACTCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCACGCTCGGAAGCGTCATCGACAGGATTTGACTGGGGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCGTTGATGGCATCGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAAGATGAAATTGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGAAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACCAAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGTGCAGCAACCAAGACTGACATTCTTCGTGAGATATCATTCAGCTGTGGGAGATGCATGCAGATCAGGCTATTGCGATGTGCTAGAGCATATTCTGGTAATAAAATCTTGTTACTGGATGTGTTTCCTGCTTAATCTGAAGTTTCTGATATAGCCCAAATACTAGGCTCGAGTATCATGAGGGAGAACCAAGTGGTTTAGGCAGAGTTTTAGTTCCCAACTTCTGGAGTTGGTCGTACCCAAACTATATATTTGCTTAGGTGAAGGTCAGAAGTGTATTAACTGATCTCAACCCGAAAAAAAGGGGTGCTAACTTCAGCTAGGTATCCACATCCGTTCTCTATGTTGTTCTTCTCTACAAAAGTTTACTTCTTCGTTTTTACTAGAACTCCTAAATTCACACCCTAACCTCCAAAATTGTGTCCATGAAGCAACTACTTGTGATTTTCCTCTGCATTCAAGTGGAACAGGAATACCCTAGGGACACTCTCAAATTTCAGAAGCCCCACCCCACAAGATGGATTATATTGGCAGTGGATATATAAATGGATTTGATTTTCTATACCAGCAAAATAGAGCACACACCAATTTGGATTTCAAATCCTTGGCTGTCTTACGCGTACCC

Coding sequence (CDS)

ATGGTCGACCGTGAACGAGATAGAGATAGAGGCCGCGACAGAGATAAAGATTGGGACCGTGATAGATACAAAGACCGGGAGCGAGACCGTGACCACCGTGAACGTGACCGGCGTAGGGATCGAGAAGATCGTGACCGGGACCGTGAACGGCGTAGGGATCAGGAAGACCGTGACCGTGAAAGGGAGCGTGGTCGGGGTAAAAGGTCACACACTCCTGACCGCGACAGATCCCGCCATACACGCTCTCGCACTCGCTCGCCGGACCGGCACCGTTCGCGGTCTCTTTCTCGTACTCCTGAGGACCGGTCCTCTCGCCGCCGCCATCGTTCGCCCTCCCCGGATCACGCTCGGAAGCGTCATCGACAGGATTTGACTGGGGACGATGAAAAGGAGCGGCAGAAAGCAGTTTCTGACTTCGTTGATGGCATCGCGAAGGAGCAGCACAAGCAGAAGAATAATAAAGATAGCGTTGGTGGCGGAGAAGTAGTGGAGGAGGCTATGGCTGATGAAGATGAAATTGAGATGATGAAGAAATTAGGTATTCCCGTGGGTTTCGATTCGACCAAGGGAAAACCTGTCCCAGGTGCTGATGTGAGTGGTGTTCGGGTAGTTACCAAGAGGCAACCTAGGCAGTACATGAATCGTCGTGGCGGGTTCAACCGGCCGTTGCCGGCCGAGCGGACCCGTGCAGCAACCAAGACTGACATTCTTCGTGAGATATCATTCAGCTGTGGGAGATGCATGCAGATCAGGCTATTGCGATGTGCTAGAGCATATTCTGGTAATAAAATCTTGTTACTGGATGTGTTTCCTGCTTAA

Protein sequence

MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTRAATKTDILREISFSCGRCMQIRLLRCARAYSGNKILLLDVFPA

Homology

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BLAST of Lsi06G011850 vs. ExPASy Swiss-Prot
Match: Q6GLZ8 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus laevis OX=8355 GN=snrnp27 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.4e-09
Identity = 77/185 (41.62%), Postives = 98/185 (52.97%), Query Frame = 0


Query: 48  RERRRDQEDRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSR-- 107
           R R R  E   R RER   +RS +  R+R R  R R+RS +R RSR  SR+P  R SR  
Sbjct: 3   RSRSRSPE---RRRER---RRSRSASRERERRRRERSRSRERRRSR--SRSPHRRRSRSP 62

Query: 108 RRHRSPSPDHARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEE 167
           RRHRS S   +R + R+D   DD+KE                      K+S GGG    +
Sbjct: 63  RRHRSSSISPSRLKDRRD---DDKKE---------------------PKESKGGGSKERQ 122

Query: 168 AMAD------EDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGG 224
             A+      E+EIEMMK +G    FDS+KGK   G+ +   + V  KR+ RQYMNR+GG
Sbjct: 123 LAAEDLEGKTEEEIEMMKLMGF-ASFDSSKGKKTDGSVNAYAINVSQKRKYRQYMNRKGG 154

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BLAST of Lsi06G011850 vs. ExPASy Swiss-Prot
Match: Q8WVK2 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP27 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-09
Identity = 81/188 (43.09%), Postives = 101/188 (53.72%), Query Frame = 0


Query: 37  RRRDREDRDRDRERRRDQEDRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLS 96
           R R R  R   RERRR +    RERER R +RS + +RDR    RSR+RSP R RSR   
Sbjct: 3   RSRSRSPR---RERRRSR-STSRERERRRRERSRSRERDR---RRSRSRSPHRRRSR--- 62

Query: 97  RTPEDRSSRRRHRSPSPDHARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDS 156
                  S RRHRS SP  +R + R+    D+EK+  K          K + +Q   +D 
Sbjct: 63  -------SPRRHRSTSPSPSRLKERR----DEEKKETKE--------TKSKERQITEEDL 122

Query: 157 VGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNR 216
            G           E+EIEMMK +G    FDSTKGK V G+ +   + V  KR+ RQYMNR
Sbjct: 123 EG---------KTEEEIEMMKLMGF-ASFDSTKGKKVDGSVNAYAINVSQKRKYRQYMNR 151

Query: 217 RGGFNRPL 224
           +GGFNRPL
Sbjct: 183 KGGFNRPL 151

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BLAST of Lsi06G011850 vs. ExPASy Swiss-Prot
Match: Q6DDA4 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus tropicalis OX=8364 GN=snrnp27 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08
Identity = 74/179 (41.34%), Postives = 97/179 (54.19%), Query Frame = 0


Query: 48  RERRRDQEDRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSR-- 107
           R R R  E   R RER   +RS +  R+R R  R R+RS +R RSR  SR+P  R SR  
Sbjct: 3   RSRSRSPE---RRRER---RRSRSASRERERRRRERSRSRERRRSR--SRSPHRRRSRSP 62

Query: 108 RRHRSPSPDHARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEE 167
           RRHRS S    R + R+D   DD+K+ +++       IA E  + K              
Sbjct: 63  RRHRSSSISPGRLKDRRD---DDKKDSKESKGAKERQIAAEDLEGKT------------- 122

Query: 168 AMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQYMNRRGGFNRPL 224
               E+EIEMMK +G    FD++KGK V G+ +   + V  KR+ RQYMNR+GGFNRPL
Sbjct: 123 ----EEEIEMMKMMGFAT-FDTSKGKKVDGSVNAYAINVSQKRKYRQYMNRKGGFNRPL 152

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BLAST of Lsi06G011850 vs. ExPASy Swiss-Prot
Match: Q8K194 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Mus musculus OX=10090 GN=Snrnp27 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08
Identity = 82/199 (41.21%), Postives = 102/199 (51.26%), Query Frame = 0


Query: 26  RERDRDHRERDRRRDREDRDRDRERRRDQEDRDRERERGRGKRSHTPDRDRSRHTRSRTR 85
           R R R  R R+RRR R    RDRERRR +  R RER+R                 RSR+R
Sbjct: 3   RSRSRSPR-RERRRSR-STSRDRERRRRERSRSRERDR----------------RRSRSR 62

Query: 86  SPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRHRQDLTGDDEKERQKAVSDFVDGIAK 145
           SP R RSR          S RRHRS SP  +R + R+    D+EK+  K +        K
Sbjct: 63  SPHRRRSR----------SPRRHRSTSPSPSRLKERR----DEEKKETKEI--------K 122

Query: 146 EQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVV 205
            + +Q   +D  G           E+EIEMMK +G    FDSTKGK V G+ +   + V 
Sbjct: 123 NKERQITEEDLEG---------KTEEEIEMMKLMGF-ASFDSTKGKKVDGSVNAYAINVS 151

Query: 206 TKRQPRQYMNRRGGFNRPL 224
            KR+ RQYMNR+GGFNRPL
Sbjct: 183 QKRKYRQYMNRKGGFNRPL 151

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BLAST of Lsi06G011850 vs. ExPASy Swiss-Prot
Match: Q6DH74 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Danio rerio OX=7955 GN=snrnp27 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.3e-06
Identity = 78/192 (40.62%), Postives = 96/192 (50.00%), Query Frame = 0


Query: 33  RERDRRRDREDRDRDRERRRDQEDRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRS 92
           R R R   R +R R R   RD+E R RERER R +     DRDR    RSR+RSP R RS
Sbjct: 3   RSRSRTPPRRERRRSRSSSRDRERRRRERERSRSR-----DRDR---RRSRSRSPHRRRS 62

Query: 93  RSLSRTPEDRSSRRRHRSPSPDHARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKN 152
           R          S RRHRS S    R++ R+D    D KE+   V      I+ E  + K 
Sbjct: 63  R----------SPRRHRSSSLSPLRQKDRRDDDRKDVKEKPAKVHQ----ISAEDMQGKT 122

Query: 153 NKDSVGGGEVVEEAMADEDEIEMMKKLGIPVGFDSTKGKPVPGA-DVSGVRVVTKRQPRQ 212
                            E+EIEMMK +G    F+++KGK   G+     V V  KR+ RQ
Sbjct: 123 -----------------EEEIEMMKLMGFG-SFETSKGKKKDGSIKAFAVNVSQKRKYRQ 154

Query: 213 YMNRRGGFNRPL 224
           YMNR+GGFNRPL
Sbjct: 183 YMNRKGGFNRPL 154

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BLAST of Lsi06G011850 vs. ExPASy TrEMBL
Match: A0A5D3CK71 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00330 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.2e-97
Identity = 217/234 (92.74%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRD +
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRSHTPDR RSR  RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEM 180
           ARKRHR+DLT DDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEM
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNAGSGEVVEEAMADEDEIEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 232

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BLAST of Lsi06G011850 vs. ExPASy TrEMBL
Match: A0A1S3BW27 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo OX=3656 GN=LOC103494258 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 4.2e-97
Identity = 217/234 (92.74%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRD +
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRSHTPDR RSR  RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEM 180
           ARKRHR+DLT DDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEM
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNAGSGEVVEEAMADEDEIEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 232

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BLAST of Lsi06G011850 vs. ExPASy TrEMBL
Match: A0A0A0LU61 (SNRNP27 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G423230 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 2.1e-96
Identity = 216/234 (92.31%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRDQ+
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRS TPDR RSR  RSRTRSPDRHRSRSLSRTPEDR SRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEM 180
           ARKRHR+DLT DDEKERQKAVSDFVDGIAKEQHKQKNNKD+VGGGEVVEEAMADEDE+EM
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 232

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BLAST of Lsi06G011850 vs. ExPASy TrEMBL
Match: A0A6J1L1Y6 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita maxima OX=3661 GN=LOC111499666 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.4e-92
Identity = 204/229 (89.08%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDR     DRDR+RERRRD++DRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDR-----DRDRERERRRDRDDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRSPD+HR+RSLSR+PEDRS RRRHRSPSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRLRSRHTRSRTRSPDQHRTRSLSRSPEDRSLRRRHRSPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLG 180
           R+DLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDEIEMMKKLG
Sbjct: 121 RRDLTVDDDKERQKVVSDFVDGIAKEQHKQKKNKDRVGGEEVVEEAVADEDEIEMMKKLG 180

Query: 181 IPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           IPVGFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 IPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 224

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BLAST of Lsi06G011850 vs. ExPASy TrEMBL
Match: A0A6J1EW85 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita moschata OX=3662 GN=LOC111436672 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 9.0e-92
Identity = 204/229 (89.08%), Postives = 212/229 (92.58%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRER       DRDR+RERRRD+EDRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRER-------DRDRERERRRDREDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRS DRHR+RSLSR+PEDRS RRRHRSPSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRLRSRHTRSRTRSLDRHRTRSLSRSPEDRSLRRRHRSPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLG 180
           R+DLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVGG EVVEEA+ADEDEIEMMKKLG
Sbjct: 121 RRDLTVDDDKERQKVVSDFVDGIAKEQHKQKKNKDSVGGEEVVEEAVADEDEIEMMKKLG 180

Query: 181 IPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           IPVGFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 IPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 222

[Close]

BLAST of Lsi06G011850 vs. NCBI nr
Match: KAG6589703.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023383.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.9 bits (938), Expect = 3.0e-97
Identity = 212/229 (92.58%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRY DRERDRD+RERDRRRDREDRDRDRERRR+++DRD E
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYIDRERDRDYRERDRRRDREDRDRDRERRREKDDRDHE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGRGKRSHTP+R RSRHTRSRTRSPDRHRSRSLSRTPEDRS RRRHRSPSPDH RKRH
Sbjct: 61  RERGRGKRSHTPERPRSRHTRSRTRSPDRHRSRSLSRTPEDRSLRRRHRSPSPDHVRKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLG 180
           R+DLT DDEK+RQKAVSDFVDGIAKEQHKQKNNKDSVGGGE VEEAMADEDEIEMMKKLG
Sbjct: 121 RRDLTADDEKDRQKAVSDFVDGIAKEQHKQKNNKDSVGGGESVEEAMADEDEIEMMKKLG 180

Query: 181 IPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           IPVGFDSTKGKPV GADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 IPVGFDSTKGKPVAGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 229

[Close]

BLAST of Lsi06G011850 vs. NCBI nr
Match: XP_008453595.1 (PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo] >KAA0058267.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo var. makuwa] >TYK11820.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo var. makuwa])

HSP 1 Score: 364.4 bits (934), Expect = 8.6e-97
Identity = 217/234 (92.74%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRD +
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDLD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRSHTPDR RSR  RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSHTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEM 180
           ARKRHR+DLT DDEKERQKAVSDFVDGIAKEQHKQKNNKD+ G GEVVEEAMADEDEIEM
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNAGSGEVVEEAMADEDEIEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 232

[Close]

BLAST of Lsi06G011850 vs. NCBI nr
Match: XP_004146322.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus] >KGN65465.1 hypothetical protein Csa_019811 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 4.3e-96
Identity = 216/234 (92.31%), Postives = 221/234 (94.44%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDRED-----RDRDRERRRDQE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDRRRDRED     RDRDRERRRDQ+
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDRRRDREDRDHRERDRDRERRRDQD 60

Query: 61  DRDRERERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDH 120
           DRDRERERGR KRS TPDR RSR  RSRTRSPDRHRSRSLSRTPEDR SRRRHRSPSPDH
Sbjct: 61  DRDRERERGRSKRSLTPDRSRSR--RSRTRSPDRHRSRSLSRTPEDRPSRRRHRSPSPDH 120

Query: 121 ARKRHRQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEM 180
           ARKRHR+DLT DDEKERQKAVSDFVDGIAKEQHKQKNNKD+VGGGEVVEEAMADEDE+EM
Sbjct: 121 ARKRHRRDLTADDEKERQKAVSDFVDGIAKEQHKQKNNKDNVGGGEVVEEAMADEDEMEM 180

Query: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAER+R
Sbjct: 181 MKKLGIPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERSR 232

[Close]

BLAST of Lsi06G011850 vs. NCBI nr
Match: XP_023530476.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530477.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530478.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo] >XP_023530479.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.4 bits (903), Expect = 3.4e-93
Identity = 206/229 (89.96%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDR     DRDR+RERRRD+EDRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDR-----DRDRERERRRDREDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRSPDRHR+RSLSR+PEDRS RRRHRSPSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRLRSRHTRSRTRSPDRHRTRSLSRSPEDRSLRRRHRSPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLG 180
           R+DLT DD+KERQK VSDFVDGIAKEQHKQK NKD VGG EVVEEA+ADEDEIEMMKKLG
Sbjct: 121 RRDLTVDDDKERQKVVSDFVDGIAKEQHKQKKNKDGVGGEEVVEEAVADEDEIEMMKKLG 180

Query: 181 IPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           IPVGFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 IPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 224

[Close]

BLAST of Lsi06G011850 vs. NCBI nr
Match: KAG6587747.1 (U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021718.1 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.1 bits (897), Expect = 1.7e-92
Identity = 206/229 (89.96%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MVDRERDRDRGRDRDKDWDRDRYKDRERDRDHRERDRRRDREDRDRDRERRRDQEDRDRE 60
           MVDRERDRDRGRDRDKD DRDRYKDRERDRDHRERDR     DRDR+RERRRD+EDRDRE
Sbjct: 1   MVDRERDRDRGRDRDKDRDRDRYKDRERDRDHRERDR-----DRDRERERRRDREDRDRE 60

Query: 61  RERGRGKRSHTPDRDRSRHTRSRTRSPDRHRSRSLSRTPEDRSSRRRHRSPSPDHARKRH 120
           RERGR KRSHTPDR RSRHTRSRTRS DRHR+RSLSR+PEDRS RRRHRSPSP+HARKRH
Sbjct: 61  RERGRSKRSHTPDRLRSRHTRSRTRSLDRHRTRSLSRSPEDRSLRRRHRSPSPEHARKRH 120

Query: 121 RQDLTGDDEKERQKAVSDFVDGIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLG 180
           R+DLT DD+KERQK VSDFVDGIAKEQHKQK NKDSVGG EVVEEA+ADEDEIEMMKKLG
Sbjct: 121 RRDLTVDDDKERQKVVSDFVDGIAKEQHKQKKNKDSVGGEEVVEEAVADEDEIEMMKKLG 180

Query: 181 IPVGFDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           IPVGFDSTKGKPVPGADVSGVR VTKRQPRQYMNRRGGFNRPLPAERTR
Sbjct: 181 IPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPAERTR 224

[Close]

BLAST of Lsi06G011850 vs. TAIR 10
Match: AT5G57370.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 151.8 bits (382), Expect = 8.2e-37
Identity = 128/225 (56.89%), Postives = 157/225 (69.78%), Query Frame = 0


Query: 19  DRDRYKDRERDRDHR-ERDRRRDREDRDRDRERRRDQEDRDRERERG---RGKRSHTPDR 78
           +RDR ++RERD+D   +RDRRR R+DRDRDR+R R++ DR+R+R+RG   +  RS TPD 
Sbjct: 3   ERDR-RERERDKDREPDRDRRRGRDDRDRDRDRDRER-DRERDRDRGLRNKKSRSRTPD- 62

Query: 79  DRSRHTRSR-TRSPDRHRSRSLS---RTPEDRSSRRRHRSPSPD-HARKRHRQDLTGDD- 138
               H R+R  RSP+R+RSRS S       DR    R RSPSPD  +RKR RQ    D+ 
Sbjct: 63  ---HHARARHVRSPERYRSRSRSIDRDRDRDRQRHHRRRSPSPDAPSRKRPRQGSVDDEK 122

Query: 139 EKERQKAVSDFVD----GIAKEQHKQKNNKDSVGGGEVVEEAMADEDEIEMMKKLGIPVG 198
           E+ R++ V+D VD     I K++ KQ ++    GGGE  +E   D +EIEMMK LGIP G
Sbjct: 123 ERNRKRVVTDSVDENASTITKKKDKQPSDAADNGGGE--DEEGMDVNEIEMMKMLGIPTG 182

Query: 199 FDSTKGKPVPGADVSGVRVVTKRQPRQYMNRRGGFNRPLPAERTR 230
           FDSTKGKPV GADVSG+R VTKRQPRQYMNRRGGFNRPLPAER R
Sbjct: 183 FDSTKGKPVAGADVSGIRAVTKRQPRQYMNRRGGFNRPLPAERNR 219

The following BLAST results are available for this feature:

BLAST of Lsi06G011850 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6GLZ8	1.4e-09	41.62	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus laevis OX=835...	[more]
Q8WVK2	1.9e-09	43.09	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Homo sapiens OX=9606 ...	[more]
Q6DDA4	1.6e-08	41.34	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus tropicalis OX...	[more]
Q8K194	2.7e-08	41.21	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Mus musculus OX=10090...	[more]
Q6DH74	3.3e-06	40.63	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Danio rerio OX=7955 G...	[more]

BLAST of Lsi06G011850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK71	4.2e-97	92.74	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo var. mak...	[more]
A0A1S3BW27	4.2e-97	92.74	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Cucumis melo OX=3656 ...	[more]
A0A0A0LU61	2.1e-96	92.31	SNRNP27 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G423230 PE=...	[more]
A0A6J1L1Y6	1.4e-92	89.08	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita maxima...	[more]
A0A6J1EW85	9.0e-92	89.08	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like OS=Cucurbita moscha...	[more]

BLAST of Lsi06G011850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589703.1	3.0e-97	92.58	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argy...	[more]
XP_008453595.1	8.6e-97	92.74	PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis melo...	[more]
XP_004146322.1	4.3e-96	92.31	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Cucumis sativus] >KGN65...	[more]
XP_023530476.1	3.4e-93	89.96	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Cucurbita pepo sub...	[more]
KAG6587747.1	1.7e-92	89.96	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein, partial [Cucurbita argy...	[more]

BLAST of Lsi06G011850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57370.1	8.2e-37	56.89	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013957	U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein	PFAM	PF08648	SNRNP27	coord: 170..225 e-value: 1.3E-24 score: 86.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..155
None	No IPR available	PANTHER	PTHR31077	U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN	coord: 29..229
None	No IPR available	PANTHER	PTHR31077:SF4	BNAA10G11430D PROTEIN	coord: 29..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G011850.1	Lsi06G011850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006397	mRNA processing
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0005634	nucleus