Lsi06G011350 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCGAGTAGCTTATTGGGTCGGCTGAGGAACGCCGTGAAGAAGCTTAAATTCATGATGAACTTTAGCATCCAAAGCTGGCGGTTGGCGGCCATGTTGGGGCGGACTTCATCGAGAAATCTCCGCCTTAGCTTCAACGAACGCCCAGGATTAAAGGGCTGTACGGAGGATATTATAGAAGAAGGGTCTGTTTCTTCATCTCGTGGGATACAAAGAACCGCCAGCTACGCTTCTGAAGATGACGTGGACCTGCGAGCGGAGGCTTTCATAGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGGAATAGTTTTAATCAACTTATGATTTCTCCTTGA ATGGCGGCGAGTAGCTTATTGGGTCGGCTGAGGAACGCCGTGAAGAAGCTTAAATTCATGATGAACTTTAGCATCCAAAGCTGGCGGTTGGCGGCCATGTTGGGGCGGACTTCATCGAGAAATCTCCGCCTTAGCTTCAACGAACGCCCAGGATTAAAGGGCTGTACGGAGGATATTATAGAAGAAGGGTCTGTTTCTTCATCTCGTGGGATACAAAGAACCGCCAGCTACGCTTCTGAAGATGACGTGGACCTGCGAGCGGAGGCTTTCATAGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGGAATAGTTTTAATCAACTTATGATTTCTCCTTGA ATGGCGGCGAGTAGCTTATTGGGTCGGCTGAGGAACGCCGTGAAGAAGCTTAAATTCATGATGAACTTTAGCATCCAAAGCTGGCGGTTGGCGGCCATGTTGGGGCGGACTTCATCGAGAAATCTCCGCCTTAGCTTCAACGAACGCCCAGGATTAAAGGGCTGTACGGAGGATATTATAGAAGAAGGGTCTGTTTCTTCATCTCGTGGGATACAAAGAACCGCCAGCTACGCTTCTGAAGATGACGTGGACCTGCGAGCGGAGGCTTTCATAGCTAATTTCTATCGCCAGCTCAGAATCGAACGCCAGGTGTCACTTGAGCTTCAATATTGCCGTGGGAATAGTTTTAATCAACTTATGATTTCTCCTTGA MAASSLLGRLRNAVKKLKFMMNFSIQSWRLAAMLGRTSSRNLRLSFNERPGLKGCTEDIIEEGSVSSSRGIQRTASYASEDDVDLRAEAFIANFYRQLRIERQVSLELQYCRGNSFNQLMISP Homology
BLAST of Lsi06G011350 vs. ExPASy TrEMBL
Match: A0A6J1JIQ4 (uncharacterized protein LOC111484948 OS=Cucurbita maxima OX=3661 GN=LOC111484948 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46 Identity = 107/126 (84.92%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of Lsi06G011350 vs. ExPASy TrEMBL
Match: A0A0A0LUK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423060 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 4.9e-45 Identity = 103/120 (85.83%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Lsi06G011350 vs. ExPASy TrEMBL
Match: A0A6J1C4F5 (uncharacterized protein LOC111007290 OS=Momordica charantia OX=3673 GN=LOC111007290 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 6.4e-45 Identity = 101/124 (81.45%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of Lsi06G011350 vs. ExPASy TrEMBL
Match: A0A6J1E1K7 (uncharacterized protein LOC111429947 OS=Cucurbita moschata OX=3662 GN=LOC111429947 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.9e-44 Identity = 100/126 (79.37%), Postives = 110/126 (87.30%), Query Frame = 0
BLAST of Lsi06G011350 vs. ExPASy TrEMBL
Match: A0A5D3CK96 (DUF761 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00610 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 9.2e-44 Identity = 102/120 (85.00%), Postives = 106/120 (88.33%), Query Frame = 0
BLAST of Lsi06G011350 vs. NCBI nr
Match: XP_038879799.1 (uncharacterized protein LOC120071543 [Benincasa hispida]) HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52 Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0
BLAST of Lsi06G011350 vs. NCBI nr
Match: XP_023515447.1 (uncharacterized protein LOC111779603 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 199.1 bits (505), Expect = 2.2e-47 Identity = 106/125 (84.80%), Postives = 113/125 (90.40%), Query Frame = 0
BLAST of Lsi06G011350 vs. NCBI nr
Match: XP_022987374.1 (uncharacterized protein LOC111484948 [Cucurbita maxima]) HSP 1 Score: 195.3 bits (495), Expect = 3.1e-46 Identity = 107/126 (84.92%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of Lsi06G011350 vs. NCBI nr
Match: XP_011648497.1 (uncharacterized protein LOC101218317 [Cucumis sativus] >KGN65448.1 hypothetical protein Csa_019865 [Cucumis sativus]) HSP 1 Score: 190.3 bits (482), Expect = 1.0e-44 Identity = 103/120 (85.83%), Postives = 108/120 (90.00%), Query Frame = 0
BLAST of Lsi06G011350 vs. NCBI nr
Match: XP_022135293.1 (uncharacterized protein LOC111007290 [Momordica charantia]) HSP 1 Score: 189.9 bits (481), Expect = 1.3e-44 Identity = 101/124 (81.45%), Postives = 110/124 (88.71%), Query Frame = 0
BLAST of Lsi06G011350 vs. TAIR 10
Match: AT5G57510.1 (unknown protein; Has 27 Blast hits to 27 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 114.4 bits (285), Expect = 6.5e-26 Identity = 72/121 (59.50%), Postives = 90/121 (74.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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