Lsi06G011200 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G011200
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box protein PP2-B10-like
Location	chr06: 21477456 .. 21479164 (-)
RNA-Seq Expression	Lsi06G011200
Synteny	Lsi06G011200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAGCAAAATGAAATGGAGCGGGAAAAGCGAAGCGAAACGGAGGGCAAAGAAATTGTTGAGTTCTCTTCGCTACCGGAAGGAGTAATAGCCGACATCTTGTCACTGACGACTCCATCGGATGCCTGCAGGTCATCGGCGGTTTCCTGGACTTTCCACGCGGCGGCCCAGTCAGATATCGCTTGGGAGAGGTTCCTTCCTTCCGATTATGACGTTTTGATCTCTCGGATGAAACCTGATGATCTGCGTTTTGATCCGACCTCGAGTTCCAAGAAGGATATCTTCTTCTCCCTTTGTGATACCCCGCTGCTCATTGATGACGGCAACAAGGTACCTCCCGATTCCCCCAATTTCTCTAAATTAAAGGTGGCCGACCAGAATTTTATGAGTAGTCGGCGTACTAAAGGCCATTGCAAAGGCGCTTTAGGCCAGAGGTTTATGTATAGCGCACCATTCTAAACCCTAGGGTCACATTTCAACACACACATTGGAGAATATTATTTGATATTATACTATACACACTTATACCCGTCTTATTTACAAAAGATCAGAAGGCCACTGGTTTATATAATTAATTATATGTACATTTTTGTGACTTGATGAATTAGCAGTGGAGTTGTCCTGCACTCTCTCTTTGTATACTCATAAATTGACTGGGTTCTTCCATATTTCGTATGTGGCAGAGCTTTTCATTGGACAAATGGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTGTCGATTGTTGGGAGTGATACCCATCCCTTCTCCTATTGGAAATGGCAACCTCATAAGGGGTCGAGGTTTTAAGTCTATGAGATTTGCTCAATGCTCAAATCCCATTCTTTATCCTGTTTTTTCTCCTCTCTATTCTAACACCTTACCTTTTAATGTGTGCACGAGAAACAGGTTTGGGGAGGTAGTCGTTCTACTCGAGGTGTGGCGCTATGAAATATGTGGAAAGATAAGTTGTAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGACACGTAAATATTATGGATTCGATTTTGATCCGATGGAGGCCATGTTGGGAATTGTTGGCGATGAATGTCGTATGACTAAGAGTGTTTGTTTGGACCCTTACTTGGAGAACCCGCATCGGTTGCACCAATTTGGACCATGGGCAGCAAGAAATCGGCGTGAGAACATCATGCTGAAGATCGAGCAGCCAAGCATGTGATCTGATGGTTGGTTCGAAATTGAGTTGGGAGAGTTTCAAACTGATGGGAAATATGATGAAGTTGAGGTCATTCTTAGGGAGGTTTATGGCAGTTGTCCCAAGAGTGGTCTTGTTGTTCAGGGGATAGATATCCGGCCTAAAATTAGCCTTGCTTAGATGAACTCTTTGAAACCCTTTTGAAGGCATGGTATTACTTTTAGTGCCATAAAAGTAAAACCAGAAACCTTGCTTTTTACATATACAATGAAGTTAAGGGGAAAAAAAGAACAGAATTAAAGGAAAACAGAATTGCAACTAGCAAAATGATTATCACAAAATGAAATGATTATCAATTGTTTCATTATTTTGCTTGTAAATTTGCTCGACATCTCCCCCCCTCATGGGGTTTGGATTCTTTTGTTAACTTGCAGTTTGACTTCATCTATCAACCCTTTGCCTATTTCTTTTTGTGATTCTACGATTGATGTGTTATGTTG

mRNA sequence

ATGGAGGAGCAAAATGAAATGGAGCGGGAAAAGCGAAGCGAAACGGAGGGCAAAGAAATTGTTGAGTTCTCTTCGCTACCGGAAGGAGTAATAGCCGACATCTTGTCACTGACGACTCCATCGGATGCCTGCAGGTCATCGGCGGTTTCCTGGACTTTCCACGCGGCGGCCCAGTCAGATATCGCTTGGGAGAGGTTCCTTCCTTCCGATTATGACGTTTTGATCTCTCGGATGAAACCTGATGATCTGCGTTTTGATCCGACCTCGAGTTCCAAGAAGGATATCTTCTTCTCCCTTTGTGATACCCCGCTGCTCATTGATGACGGCAACAAGAGCTTTTCATTGGACAAATGGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTGTCGATTGTTGGGAGTGATACCCATCCCTTCTCCTATTGGAAATGGCAACCTCATAAGGGGTCGAGGTTTGGGGAGGTAGTCGTTCTACTCGAGGTGTGGCGCTATGAAATATGTGGAAAGATAAGTTGTAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGACACGTAAATATTATGGATTCGATTTTGATCCGATGGAGGCCATGTTGGGAATTGTTGGCGATGAATGTCGTATGACTAAGAGTGTTTGTTTGGACCCTTACTTGGAGAACCCGCATCGGTTGCACCAATTTGGACCATGGGCAGCAAGAAATCGGCGTGAGAACATCATGCTGAAGATCGAGCAGCCAAGCATGTGATCTGATGGTTGGTTCGAAATTGAGTTGGGAGAGTTTCAAACTGATGGGAAATATGATGAAGTTGAGGTCATTCTTAGGGAGGTTTATGGCAGTTGTCCCAAGAGTGGTCTTGTTGTTCAGGGGATAGATATCCGGCCTAAAATTAGCCTTGCTTAGATGAACTCTTTGAAACCCTTTTGAAGGCATGGTATTACTTTTAGTGCCATAAAAGTAAAACCAGAAACCTTGCTTTTTACATATACAATGAAGTTAAGGGGAAAAAAAGAACAGAATTAAAGGAAAACAGAATTGCAACTAGCAAAATGATTATCACAAAATGAAATGATTATCAATTGTTTCATTATTTTGCTTGTAAATTTGCTCGACATCTCCCCCCCTCATGGGGTTTGGATTCTTTTGTTAACTTGCAGTTTGACTTCATCTATCAACCCTTTGCCTATTTCTTTTTGTGATTCTACGATTGATGTGTTATGTTG

Coding sequence (CDS)

ATGGAGGAGCAAAATGAAATGGAGCGGGAAAAGCGAAGCGAAACGGAGGGCAAAGAAATTGTTGAGTTCTCTTCGCTACCGGAAGGAGTAATAGCCGACATCTTGTCACTGACGACTCCATCGGATGCCTGCAGGTCATCGGCGGTTTCCTGGACTTTCCACGCGGCGGCCCAGTCAGATATCGCTTGGGAGAGGTTCCTTCCTTCCGATTATGACGTTTTGATCTCTCGGATGAAACCTGATGATCTGCGTTTTGATCCGACCTCGAGTTCCAAGAAGGATATCTTCTTCTCCCTTTGTGATACCCCGCTGCTCATTGATGACGGCAACAAGAGCTTTTCATTGGACAAATGGAGTGGTAAGAAATGCATAATGCTTGGAGCAAGGGACCTGTCGATTGTTGGGAGTGATACCCATCCCTTCTCCTATTGGAAATGGCAACCTCATAAGGGGTCGAGGTTTGGGGAGGTAGTCGTTCTACTCGAGGTGTGGCGCTATGAAATATGTGGAAAGATAAGTTGTAGAATGTTGTCTCCTGCAACAACTTATGCAGCTTACTTTGTGTTTAAGATGAAGACACGTAAATATTATGGATTCGATTTTGATCCGATGGAGGCCATGTTGGGAATTGTTGGCGATGAATGTCGTATGACTAAGAGTGTTTGTTTGGACCCTTACTTGGAGAACCCGCATCGGTTGCACCAATTTGGACCATGGGCAGCAAGAAATCGGCGTGAGAACATCATGCTGAAGATCGAGCAGCCAAGCATGTGA

Protein sequence

MEEQNEMEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRRENIMLKIEQPSM

Homology

[Close]

BLAST of Lsi06G011200 vs. ExPASy Swiss-Prot
Match: Q3E6P4 (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-40
Identity = 97/235 (41.28%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 17  GKEIVE-----FSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDY 76
           G EIV      F  LPE  I++I+S T+P DAC +++VS TF +A  SD  W++FLP +Y
Sbjct: 50  GGEIVSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEY 109

Query: 77  DVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDL 136
           + L+SR +          +SKK+++F+LC  P+LI+DG KSF L+K SGK+CIML +++L
Sbjct: 110 ESLVSRSR--------VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKEL 169

Query: 137 SIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKM 196
            I    +    YW+W     SRF ++  LL+V  +EI GK S R+LSP T Y+AY VFK 
Sbjct: 170 WITWGSSP--EYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKT 229

Query: 197 KTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRRE 247
           K R   G    P+E  LG+VG E              +   ++  GP   R RRE
Sbjct: 230 KDR-CPGLGHLPVEVGLGLVGQE-------------SSKRFIYFIGPRDRRGRRE 260

[Close]

BLAST of Lsi06G011200 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 7.3e-40
Identity = 93/208 (44.71%), Postives = 128/208 (61.54%), Query Frame = 0


Query: 7   MEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERF 66
           M R++R ++E      F S PE  I+ I+S T P DAC ++ VS TF +  +SDI WE+F
Sbjct: 1   MGRKRRVKSESS---PFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKF 60

Query: 67  LPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIML 126
           LP+DY+ LI   +          SSKK+++FSLC+ P+L DD  KS  L+K SGK+C+ML
Sbjct: 61  LPADYESLIPPSR--------VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLML 120

Query: 127 GARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAY 186
            A +LSI+  D     YW+W P   SRF +V  L +V  +EI G+ + R+LSP T Y+AY
Sbjct: 121 SAMNLSIIWGDNP--QYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAY 180

Query: 187 FVFKMKTRKYYGFDFDPMEAMLGIVGDE 215
            VFK    K YGF    +EA +G+VG E
Sbjct: 181 IVFK-GVDKCYGFQNVAIEAAVGVVGQE 194

[Close]

BLAST of Lsi06G011200 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 6.2e-39
Identity = 89/222 (40.09%), Postives = 138/222 (62.16%), Query Frame = 0


Query: 20  IVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDVLISRMK 79
           + E   LPE  ++ I+S T+P DAC  ++VS TF +A +SDI WE+F+P +Y+ LIS+ +
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 80  PDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSIVGSDTH 139
               +F     SKK+++F+LCD  +LIDDG KS  ++K + K+CIM+ A +L+I   ++ 
Sbjct: 93  A--FKF----LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNS- 152

Query: 140 PFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKTRKYYGF 199
           P S W+W P   +RF  V  LLEV  +EI G+I+ R++SP T Y+AY V+K K    YGF
Sbjct: 153 PQS-WRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGF 212

Query: 200 DFDPMEAMLGIVG----DECRMTKSVCLDPYLENPHRLHQFG 238
           +   +E ++G+VG    + CR  + +C D  ++   R    G
Sbjct: 213 ENVAVEVVVGVVGQDLEESCR--RYICFDETMDEQFRRRDRG 243

[Close]

BLAST of Lsi06G011200 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-38
Identity = 85/190 (44.74%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 23  FSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDVLISRMKPDD 82
           F +LPE  I+ ++S T+P DAC  ++VS +  +AAQSD+ WE FLPS+Y  L+ +     
Sbjct: 32  FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQ----- 91

Query: 83  LRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSIVGSDTHPFS 142
                   SKK+IF SL D  +L+++G KSF ++K SGKKC ML A +L+I+  D+   +
Sbjct: 92  ---SANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSP--A 151

Query: 143 YWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKTRKYYGFDFD 202
           YWKW     S+F +V  L  V  +E+ GKISC MLS  T Y+ Y VFK    + YGFD  
Sbjct: 152 YWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLV 211

Query: 203 PMEAMLGIVG 213
           P+EA +G VG
Sbjct: 212 PVEAGVGFVG 211

[Close]

BLAST of Lsi06G011200 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 2.6e-37
Identity = 92/219 (42.01%), Postives = 131/219 (59.82%), Query Frame = 0


Query: 10  EKRSETEGKEIVE--FSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFL 69
           EK      K+IV     SLPEG I++I+S T+P DAC ++AVS  F +A +SDI WE+FL
Sbjct: 9   EKNRSESRKKIVSSTLDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFL 68

Query: 70  PSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLG 129
           P+DY+ LI+  +          SSKK+++FSLC+ PLLI+DG  S  L+K SGK+CIML 
Sbjct: 69  PTDYESLITPSR--------VFSSKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLS 128

Query: 130 ARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYF 189
           A  +++  S       + W P   SRF  V  L E +R+E   +++ R+LS  T Y+ Y 
Sbjct: 129 ATAMNL-SSMADMSQRFLWIPCPESRFETVAALREAYRFEFNCRMNTRVLSLRTRYSVYI 188

Query: 190 VFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPY 227
           VFK K   + GF    +EA++GIVG+E      +C D +
Sbjct: 189 VFK-KADNWCGFKGVSIEAVVGIVGEE-SFRSFICFDTH 216

[Close]

BLAST of Lsi06G011200 vs. ExPASy TrEMBL
Match: A0A0A0LZQ3 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421910 PE=4 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 1.7e-95
Identity = 186/258 (72.09%), Postives = 209/258 (81.01%), Query Frame = 0


Query: 5   NEMEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWE 64
           NE E EKRSE+EGKE+VEFSSLPEGVIA+ILSLT+P D CR SAVSWTFHAAAQSD+AWE
Sbjct: 11  NEREWEKRSESEGKEMVEFSSLPEGVIANILSLTSPLDNCRLSAVSWTFHAAAQSDVAWE 70

Query: 65  RFLPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCI 124
           RF+PSDY +LISRM       +PTSSSKKDIFFSL DTPLLIDDG +SFSLD WSGKKCI
Sbjct: 71  RFIPSDYHLLISRM-------NPTSSSKKDIFFSLSDTPLLIDDGKQSFSLDIWSGKKCI 130

Query: 125 MLGARDLSIVGSDTHPFSYWKWQPHKGS------RFGEVVVLLEVWRYEICGKISCRMLS 184
           MLGARDLSI GSDT   S WKW PH+GS      RFGEVVVLL++   E+ GKISCRMLS
Sbjct: 131 MLGARDLSISGSDTS--SLWKWVPHQGSRVGLRNRFGEVVVLLDICLLEVSGKISCRMLS 190

Query: 185 PATTYAAYFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGP 244
           PATTYAAYFVFKMK RKYYGF+ DP+EAMLG+VGD+C   K+VCLDP L++P  LHQF P
Sbjct: 191 PATTYAAYFVFKMKKRKYYGFNLDPVEAMLGVVGDDCH-GKNVCLDPDLDSPSWLHQFLP 250

Query: 245 WAARNRRENIMLKIEQPS 257
           WA  N+    M + EQP+
Sbjct: 251 WAESNQN---MSEFEQPN 255

[Close]

BLAST of Lsi06G011200 vs. ExPASy TrEMBL
Match: A0A6J1C0X7 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 2.3e-89
Identity = 172/255 (67.45%), Postives = 199/255 (78.04%), Query Frame = 0


Query: 1   MEEQNEMEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSD 60
           MEE+NEME +  + TEG+EI +FS LPEGVIA+ILSLTTP DACRSS VSWTFHAAAQSD
Sbjct: 1   MEERNEMEEKTSTATEGEEIDDFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSD 60

Query: 61  IAWERFLPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSG 120
           I W+RFLP+D+  L+SR KP DL FDP SSSKK+IFFSLCD PLLIDDG KSFSLDK SG
Sbjct: 61  IVWDRFLPTDWHDLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSG 120

Query: 121 KKCIMLGARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPA 180
           KKCIMLGARDLS+V  DT    YW W+ H  SRF EV VLLEVW  EI G+ISCRMLSPA
Sbjct: 121 KKCIMLGARDLSVVWGDTS--FYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPA 180

Query: 181 TTYAAYFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWA 240
           TTYAAYFVFKM+ R+YYGF+ DP +AM+G  G E R +KSVCLDP+++NP R        
Sbjct: 181 TTYAAYFVFKMRKRRYYGFNVDPADAMVGTGGTENR-SKSVCLDPFIDNPLR-------- 240

Query: 241 ARNRRENIMLKIEQP 256
              RR ++ L ++QP
Sbjct: 241 ---RRRHVPLAVDQP 241

[Close]

BLAST of Lsi06G011200 vs. ExPASy TrEMBL
Match: A0A6J1BZ47 (F-box protein PP2-B10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 1.4e-86
Identity = 172/251 (68.53%), Postives = 195/251 (77.69%), Query Frame = 0


Query: 6   EMEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWER 65
           EME E  + TEG+EI +FSSLPEGVIA+ILSLT PSDACRSS VS  FHAAAQSDI W+R
Sbjct: 20  EMEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDR 79

Query: 66  FLPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNK-SFSLDKWSGKKCI 125
           FLP+D+  LI R KP DL  DP SSSKK+IFFSLCD PLL DDG K SFSLDKWSGKKCI
Sbjct: 80  FLPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCI 139

Query: 126 MLGARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYA 185
           MLGARDLSIV  DT    YW W+ H  SRF EVVV+L+VW  EI GKIS  MLSPATTYA
Sbjct: 140 MLGARDLSIVWGDTS--VYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYA 199

Query: 186 AYFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNR 245
           AYFVF+M+ R+YYGF+ DP++AM+GIVG E  M KSVCLDPYL++PH+  +  P A  N 
Sbjct: 200 AYFVFRMRERRYYGFNIDPVDAMVGIVGSEYCM-KSVCLDPYLDDPHQRRRRVPRAGNNL 259

Query: 246 RENIMLKIEQP 256
            EN M  +EQP
Sbjct: 260 PEN-MSGLEQP 266

[Close]

BLAST of Lsi06G011200 vs. ExPASy TrEMBL
Match: A0A6J1C117 (F-box protein PP2-B10-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111007056 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 3.1e-86
Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 7   MEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERF 66
           ME E  + TEG+EI +FSSLPEGVIA+ILSLT PSDACRSS VS  FHAAAQSDI W+RF
Sbjct: 1   MEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRF 60

Query: 67  LPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNK-SFSLDKWSGKKCIM 126
           LP+D+  LI R KP DL  DP SSSKK+IFFSLCD PLL DDG K SFSLDKWSGKKCIM
Sbjct: 61  LPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIM 120

Query: 127 LGARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAA 186
           LGARDLSIV  DT    YW W+ H  SRF EVVV+L+VW  EI GKIS  MLSPATTYAA
Sbjct: 121 LGARDLSIVWGDTS--VYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAA 180

Query: 187 YFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRR 246
           YFVF+M+ R+YYGF+ DP++AM+GIVG E  M KSVCLDPYL++PH+  +  P A  N  
Sbjct: 181 YFVFRMRERRYYGFNIDPVDAMVGIVGSEYCM-KSVCLDPYLDDPHQRRRRVPRAGNNLP 240

Query: 247 ENIMLKIEQP 256
           EN M  +EQP
Sbjct: 241 EN-MSGLEQP 246

[Close]

BLAST of Lsi06G011200 vs. ExPASy TrEMBL
Match: A0A5A7UXV0 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006450 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.1e-82
Identity = 157/242 (64.88%), Postives = 184/242 (76.03%), Query Frame = 0


Query: 14  ETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDV 73
           E +G+EI +FSSLPEGV+A ILS TTPSDACRSS VS TF AAAQSDI W+ FLP+D+++
Sbjct: 4   EEKGEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDSFLPTDWEI 63

Query: 74  LISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSI 133
           LISR KP +L FDP SSSKK+IFFSLCDTPL+IDDGNKSFSLDKWSGKKCIMLGAR+LSI
Sbjct: 64  LISRRKPSNLNFDPISSSKKEIFFSLCDTPLIIDDGNKSFSLDKWSGKKCIMLGARELSI 123

Query: 134 VGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKT 193
           + SD    +YW W+PH  SRF EV VLL VW  EI GK+SC+MLSPATTYAAYFVFKM  
Sbjct: 124 IWSDMP--TYWTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDE 183

Query: 194 RKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRRENIMLKIE 253
           R+YYGFD    +A + IV  EC  +  VCLDP+L+      +  P   RN   N M + +
Sbjct: 184 RRYYGFDIVAADAAVAIVDGEC-CSSRVCLDPFLDIAPPKRRRTPCLRRNPLGNSMSRAK 242

Query: 254 QP 256
           QP
Sbjct: 244 QP 242

[Close]

BLAST of Lsi06G011200 vs. NCBI nr
Match: XP_022135496.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 338.6 bits (867), Expect = 4.8e-89
Identity = 172/255 (67.45%), Postives = 199/255 (78.04%), Query Frame = 0


Query: 1   MEEQNEMEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSD 60
           MEE+NEME +  + TEG+EI +FS LPEGVIA+ILSLTTP DACRSS VSWTFHAAAQSD
Sbjct: 1   MEERNEMEEKTSTATEGEEIDDFSLLPEGVIANILSLTTPPDACRSSEVSWTFHAAAQSD 60

Query: 61  IAWERFLPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSG 120
           I W+RFLP+D+  L+SR KP DL FDP SSSKK+IFFSLCD PLLIDDG KSFSLDK SG
Sbjct: 61  IVWDRFLPTDWHDLVSRAKPSDLNFDPASSSKKEIFFSLCDRPLLIDDGKKSFSLDKRSG 120

Query: 121 KKCIMLGARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPA 180
           KKCIMLGARDLS+V  DT    YW W+ H  SRF EV VLLEVW  EI G+ISCRMLSPA
Sbjct: 121 KKCIMLGARDLSVVWGDTS--FYWTWERHPESRFAEVAVLLEVWWLEIRGRISCRMLSPA 180

Query: 181 TTYAAYFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWA 240
           TTYAAYFVFKM+ R+YYGF+ DP +AM+G  G E R +KSVCLDP+++NP R        
Sbjct: 181 TTYAAYFVFKMRKRRYYGFNVDPADAMVGTGGTENR-SKSVCLDPFIDNPLR-------- 240

Query: 241 ARNRRENIMLKIEQP 256
              RR ++ L ++QP
Sbjct: 241 ---RRRHVPLAVDQP 241

[Close]

BLAST of Lsi06G011200 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 335.9 bits (860), Expect = 3.1e-88
Identity = 167/249 (67.07%), Postives = 195/249 (78.31%), Query Frame = 0


Query: 7   MEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERF 66
           ME EK   TEG+EI +FSSLPEGV+A ILSLTTPSDACRSSAVS TFHAAAQSDI W++ 
Sbjct: 2   MEEEKEKGTEGEEISDFSSLPEGVVAKILSLTTPSDACRSSAVSRTFHAAAQSDIVWDKL 61

Query: 67  LPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIML 126
           LP+D+ +LISR KP +L FDP SS KK+IFFSLC++PLLIDDGNKS SL+KWSGKKCIML
Sbjct: 62  LPTDWKLLISRRKPSNLNFDPISSPKKEIFFSLCESPLLIDDGNKSLSLEKWSGKKCIML 121

Query: 127 GARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAY 186
           GARDLSIV  DT    YW W+ H  SRF EV VLL+VW  EI G+ISCRMLSP TTYAAY
Sbjct: 122 GARDLSIVWGDTS--YYWSWEHHTDSRFAEVAVLLDVWWLEIRGRISCRMLSPKTTYAAY 181

Query: 187 FVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRRE 246
           FVFKM+ R+YYGF+ +P +A +GI+G E    KSVCLDPYL+NP R  +  PW  R + E
Sbjct: 182 FVFKMRQRRYYGFNINPADATVGILGTEPH-RKSVCLDPYLDNPQRRRRHAPWMMRPQSE 241

Query: 247 NIMLKIEQP 256
           + M  +E P
Sbjct: 242 D-MAGLEWP 246

[Close]

BLAST of Lsi06G011200 vs. NCBI nr
Match: XP_022134921.1 (F-box protein PP2-B10-like isoform X1 [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-86
Identity = 172/251 (68.53%), Postives = 195/251 (77.69%), Query Frame = 0


Query: 6   EMEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWER 65
           EME E  + TEG+EI +FSSLPEGVIA+ILSLT PSDACRSS VS  FHAAAQSDI W+R
Sbjct: 20  EMEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDR 79

Query: 66  FLPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNK-SFSLDKWSGKKCI 125
           FLP+D+  LI R KP DL  DP SSSKK+IFFSLCD PLL DDG K SFSLDKWSGKKCI
Sbjct: 80  FLPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCI 139

Query: 126 MLGARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYA 185
           MLGARDLSIV  DT    YW W+ H  SRF EVVV+L+VW  EI GKIS  MLSPATTYA
Sbjct: 140 MLGARDLSIVWGDTS--VYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYA 199

Query: 186 AYFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNR 245
           AYFVF+M+ R+YYGF+ DP++AM+GIVG E  M KSVCLDPYL++PH+  +  P A  N 
Sbjct: 200 AYFVFRMRERRYYGFNIDPVDAMVGIVGSEYCM-KSVCLDPYLDDPHQRRRRVPRAGNNL 259

Query: 246 RENIMLKIEQP 256
            EN M  +EQP
Sbjct: 260 PEN-MSGLEQP 266

[Close]

BLAST of Lsi06G011200 vs. NCBI nr
Match: XP_022134922.1 (F-box protein PP2-B10-like isoform X2 [Momordica charantia])

HSP 1 Score: 328.2 bits (840), Expect = 6.5e-86
Identity = 171/250 (68.40%), Postives = 194/250 (77.60%), Query Frame = 0


Query: 7   MEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERF 66
           ME E  + TEG+EI +FSSLPEGVIA+ILSLT PSDACRSS VS  FHAAAQSDI W+RF
Sbjct: 1   MEEETMTGTEGEEIADFSSLPEGVIANILSLTGPSDACRSSTVSRAFHAAAQSDIVWDRF 60

Query: 67  LPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNK-SFSLDKWSGKKCIM 126
           LP+D+  LI R KP DL  DP SSSKK+IFFSLCD PLL DDG K SFSLDKWSGKKCIM
Sbjct: 61  LPTDWYDLICRRKPSDLNIDPISSSKKEIFFSLCDNPLLTDDGKKLSFSLDKWSGKKCIM 120

Query: 127 LGARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAA 186
           LGARDLSIV  DT    YW W+ H  SRF EVVV+L+VW  EI GKIS  MLSPATTYAA
Sbjct: 121 LGARDLSIVWGDTS--VYWTWESHPESRFAEVVVILKVWWLEIRGKISSGMLSPATTYAA 180

Query: 187 YFVFKMKTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRR 246
           YFVF+M+ R+YYGF+ DP++AM+GIVG E  M KSVCLDPYL++PH+  +  P A  N  
Sbjct: 181 YFVFRMRERRYYGFNIDPVDAMVGIVGSEYCM-KSVCLDPYLDDPHQRRRRVPRAGNNLP 240

Query: 247 ENIMLKIEQP 256
           EN M  +EQP
Sbjct: 241 EN-MSGLEQP 246

[Close]

BLAST of Lsi06G011200 vs. NCBI nr
Match: TYK09497.1 (F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 4.3e-82
Identity = 157/242 (64.88%), Postives = 184/242 (76.03%), Query Frame = 0


Query: 14  ETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDV 73
           E +G+EI +FSSLPEGV+A ILS TTPSDACRSS VS TF AAAQSDI W+ FLP+D+++
Sbjct: 48  EEKGEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDSFLPTDWEI 107

Query: 74  LISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSI 133
           LISR KP +L FDP SSSKK+IFFSLCDTPL+IDDGNKSFSLDKWSGKKCIMLGAR+LSI
Sbjct: 108 LISRRKPSNLNFDPISSSKKEIFFSLCDTPLIIDDGNKSFSLDKWSGKKCIMLGARELSI 167

Query: 134 VGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKT 193
           + SD    +YW W+PH  SRF EV VLL VW  EI GK+SC+MLSPATTYAAYFVFKM  
Sbjct: 168 IWSDMP--TYWTWEPHPESRFAEVAVLLNVWWLEIKGKLSCKMLSPATTYAAYFVFKMDE 227

Query: 194 RKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRRENIMLKIE 253
           R+YYGFD    +A + IV  EC  +  VCLDP+L+      +  P   RN   N M + +
Sbjct: 228 RRYYGFDIVAADAAVAIVDGEC-CSSRVCLDPFLDIAPPKRRRTPCLRRNPLGNSMSRAK 286

Query: 254 QP 256
           QP
Sbjct: 288 QP 286

[Close]

BLAST of Lsi06G011200 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 167.2 bits (422), Expect = 1.8e-41
Identity = 97/235 (41.28%), Postives = 136/235 (57.87%), Query Frame = 0


Query: 17  GKEIVE-----FSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDY 76
           G EIV      F  LPE  I++I+S T+P DAC +++VS TF +A  SD  W++FLP +Y
Sbjct: 50  GGEIVSPGTSPFDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEY 109

Query: 77  DVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDL 136
           + L+SR +          +SKK+++F+LC  P+LI+DG KSF L+K SGK+CIML +++L
Sbjct: 110 ESLVSRSR--------VFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKEL 169

Query: 137 SIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKM 196
            I    +    YW+W     SRF ++  LL+V  +EI GK S R+LSP T Y+AY VFK 
Sbjct: 170 WITWGSSP--EYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKT 229

Query: 197 KTRKYYGFDFDPMEAMLGIVGDECRMTKSVCLDPYLENPHRLHQFGPWAARNRRE 247
           K R   G    P+E  LG+VG E              +   ++  GP   R RRE
Sbjct: 230 KDR-CPGLGHLPVEVGLGLVGQE-------------SSKRFIYFIGPRDRRGRRE 260

[Close]

BLAST of Lsi06G011200 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 165.6 bits (418), Expect = 5.2e-41
Identity = 93/208 (44.71%), Postives = 128/208 (61.54%), Query Frame = 0


Query: 7   MEREKRSETEGKEIVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERF 66
           M R++R ++E      F S PE  I+ I+S T P DAC ++ VS TF +  +SDI WE+F
Sbjct: 1   MGRKRRVKSESS---PFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKF 60

Query: 67  LPSDYDVLISRMKPDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIML 126
           LP+DY+ LI   +          SSKK+++FSLC+ P+L DD  KS  L+K SGK+C+ML
Sbjct: 61  LPADYESLIPPSR--------VFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLML 120

Query: 127 GARDLSIVGSDTHPFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAY 186
            A +LSI+  D     YW+W P   SRF +V  L +V  +EI G+ + R+LSP T Y+AY
Sbjct: 121 SAMNLSIIWGDNP--QYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAY 180

Query: 187 FVFKMKTRKYYGFDFDPMEAMLGIVGDE 215
            VFK    K YGF    +EA +G+VG E
Sbjct: 181 IVFK-GVDKCYGFQNVAIEAAVGVVGQE 194

[Close]

BLAST of Lsi06G011200 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 162.5 bits (410), Expect = 4.4e-40
Identity = 89/222 (40.09%), Postives = 138/222 (62.16%), Query Frame = 0


Query: 20  IVEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDVLISRMK 79
           + E   LPE  ++ I+S T+P DAC  ++VS TF +A +SDI WE+F+P +Y+ LIS+ +
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 80  PDDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSIVGSDTH 139
               +F     SKK+++F+LCD  +LIDDG KS  ++K + K+CIM+ A +L+I   ++ 
Sbjct: 93  A--FKF----LSKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNS- 152

Query: 140 PFSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKTRKYYGF 199
           P S W+W P   +RF  V  LLEV  +EI G+I+ R++SP T Y+AY V+K K    YGF
Sbjct: 153 PQS-WRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYK-KLNICYGF 212

Query: 200 DFDPMEAMLGIVG----DECRMTKSVCLDPYLENPHRLHQFG 238
           +   +E ++G+VG    + CR  + +C D  ++   R    G
Sbjct: 213 ENVAVEVVVGVVGQDLEESCR--RYICFDETMDEQFRRRDRG 243

[Close]

BLAST of Lsi06G011200 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 161.4 bits (407), Expect = 9.8e-40
Identity = 85/190 (44.74%), Postives = 118/190 (62.11%), Query Frame = 0


Query: 23  FSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDVLISRMKPDD 82
           F +LPE  I+ ++S T+P DAC  ++VS +  +AAQSD+ WE FLPS+Y  L+ +     
Sbjct: 32  FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQ----- 91

Query: 83  LRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSIVGSDTHPFS 142
                   SKK+IF SL D  +L+++G KSF ++K SGKKC ML A +L+I+  D+   +
Sbjct: 92  ---SANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSP--A 151

Query: 143 YWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKTRKYYGFDFD 202
           YWKW     S+F +V  L  V  +E+ GKISC MLS  T Y+ Y VFK    + YGFD  
Sbjct: 152 YWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLV 211

Query: 203 PMEAMLGIVG 213
           P+EA +G VG
Sbjct: 212 PVEAGVGFVG 211

[Close]

BLAST of Lsi06G011200 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 152.1 bits (383), Expect = 5.9e-37
Identity = 89/185 (48.11%), Postives = 110/185 (59.46%), Query Frame = 0


Query: 21  VEFSSLPEGVIADILSLTTPSDACRSSAVSWTFHAAAQSDIAWERFLPSDYDVLISRMKP 80
           + F  LPE  IA ++S T+P DACR SAVS    +AA S+  WERFLPSDY + I     
Sbjct: 1   MNFLDLPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLS 60

Query: 81  DDLRFDPTSSSKKDIFFSLCDTPLLIDDGNKSFSLDKWSGKKCIMLGARDLSIVGSDTHP 140
              RF     S K +F   C++PLLI+DG  SF ++K SGKKC ML AR L IV  D+  
Sbjct: 61  ---RF-----SNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPE 120

Query: 141 FSYWKWQPHKGSRFGEVVVLLEVWRYEICGKISCRMLSPATTYAAYFVFKMKTRKYYGFD 200
           F  W W     SRF EV  LL V  +EI GKIS  +LS AT Y+AY VFK +    +GF+
Sbjct: 121 F--WIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFE 175

Query: 201 FDPME 206
             P+E
Sbjct: 181 SLPLE 175

The following BLAST results are available for this feature:

BLAST of Lsi06G011200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E6P4	2.5e-40	41.28	F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1	[more]
Q9ZVQ6	7.3e-40	44.71	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q9ZVQ8	6.2e-39	40.09	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q6NPT8	1.4e-38	44.74	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]
Q9FV02	2.6e-37	42.01	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]

BLAST of Lsi06G011200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZQ3	1.7e-95	72.09	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421910 PE=4 ...	[more]
A0A6J1C0X7	2.3e-89	67.45	F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111007437 PE=4 S...	[more]
A0A6J1BZ47	1.4e-86	68.53	F-box protein PP2-B10-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A6J1C117	3.1e-86	68.40	F-box protein PP2-B10-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A5A7UXV0	2.1e-82	64.88	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of Lsi06G011200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135496.1	4.8e-89	67.45	F-box protein PP2-B10-like [Momordica charantia]	[more]
XP_038878468.1	3.1e-88	67.07	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_022134921.1	2.9e-86	68.53	F-box protein PP2-B10-like isoform X1 [Momordica charantia]	[more]
XP_022134922.1	6.5e-86	68.40	F-box protein PP2-B10-like isoform X2 [Momordica charantia]	[more]
TYK09497.1	4.3e-82	64.88	F-box protein PP2-B10-like [Cucumis melo var. makuwa]	[more]

BLAST of Lsi06G011200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02240.1	1.8e-41	41.28	F-box family protein	[more]
AT2G02360.1	5.2e-41	44.71	phloem protein 2-B10	[more]
AT2G02340.1	4.4e-40	40.09	phloem protein 2-B8	[more]
AT2G02230.1	9.8e-40	44.74	phloem protein 2-B1	[more]
AT5G24560.1	5.9e-37	48.11	phloem protein 2-B12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 10..107 e-value: 1.5E-5 score: 26.8
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 15..228
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 15..228
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 23..66 e-value: 3.4E-5 score: 23.6
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 20..66 score: 8.967582
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 121..232 e-value: 1.3E-28 score: 99.9
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 11..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G011200.1	Lsi06G011200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009251	glucan catabolic process
molecular_function	GO:0008422	beta-glucosidase activity
molecular_function	GO:0005515	protein binding