Lsi06G010990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G010990
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tetraspanin-15
Location	chr06: 21249698 .. 21250375 (-)
RNA-Seq Expression	Lsi06G010990
Synteny	Lsi06G010990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGAGAACAACAACAACAATGGCAATAATGGCAACCCGGTCGTTGCAGAGGAAGCCGGTGCAATAGTGGCGGTAGTAGAAGAGAAGCCTCCTTGCAAAGACAAAGAATTAGGTGGCGGTGGCGGAGGCGGAGGCGGAGGCGGAGTGGATGTTGTTCCGGCAGCGAGTAAAATGAAGAACCCATTTCTGGAAATAAACAACTTAGAGAAAGCGTTGGCTACAATGACGCTAATACTGTCAATCCCAGTATTGGGTTTTATTGTGTGGATATTTTATGTGAGAGACTCGGAATGCGAGAGCATTTTGAAGCTGCCAAGTTTCCAAGTGGGAATTGGGGTTGGTTTAATTTTCTTATTCCTTATAAGTAACGCAGTGGTTTTCTTAAGGTCTCGATACCCTGTTTTGGGGCTTATGATTGTGATGATTCCATTGTTGCTGATATTCATAATTGGGCTTGCGCTTGTGGGAGGATATAAAATGGAGAGCCGATCAGTGGCTGCATCACCCAAATGGCTGAGGTTGAAGGTATTTAATGAAGAGCATTGGATGGATATTAAGTCTTGCATTTATGATACAGGGGCTTGTGATGATTTGGTCTCCAGAACTCTCATGCTTAAGTCTTATGATTTTAGCCTCAAGAAACTCTCCTCCGTTGAGGTAAATTCTTCTTCCTAA

mRNA sequence

ATGGCAGAGAACAACAACAACAATGGCAATAATGGCAACCCGGTCGTTGCAGAGGAAGCCGGTGCAATAGTGGCGGTAGTAGAAGAGAAGCCTCCTTGCAAAGACAAAGAATTAGGTGGCGGTGGCGGAGGCGGAGGCGGAGGCGGAGTGGATGTTGTTCCGGCAGCGAGTAAAATGAAGAACCCATTTCTGGAAATAAACAACTTAGAGAAAGCGTTGGCTACAATGACGCTAATACTGTCAATCCCAGTATTGGGTTTTATTGTGTGGATATTTTATGTGAGAGACTCGGAATGCGAGAGCATTTTGAAGCTGCCAAGTTTCCAAGTGGGAATTGGGGTTGGTTTAATTTTCTTATTCCTTATAAGTAACGCAGTGGTTTTCTTAAGGTCTCGATACCCTGTTTTGGGGCTTATGATTGTGATGATTCCATTGTTGCTGATATTCATAATTGGGCTTGCGCTTGTGGGAGGATATAAAATGGAGAGCCGATCAGTGGCTGCATCACCCAAATGGCTGAGGTTGAAGGTATTTAATGAAGAGCATTGGATGGATATTAAGTCTTGCATTTATGATACAGGGGCTTGTGATGATTTGGTCTCCAGAACTCTCATGCTTAAGTCTTATGATTTTAGCCTCAAGAAACTCTCCTCCGTTGAGGTAAATTCTTCTTCCTAA

Coding sequence (CDS)

ATGGCAGAGAACAACAACAACAATGGCAATAATGGCAACCCGGTCGTTGCAGAGGAAGCCGGTGCAATAGTGGCGGTAGTAGAAGAGAAGCCTCCTTGCAAAGACAAAGAATTAGGTGGCGGTGGCGGAGGCGGAGGCGGAGGCGGAGTGGATGTTGTTCCGGCAGCGAGTAAAATGAAGAACCCATTTCTGGAAATAAACAACTTAGAGAAAGCGTTGGCTACAATGACGCTAATACTGTCAATCCCAGTATTGGGTTTTATTGTGTGGATATTTTATGTGAGAGACTCGGAATGCGAGAGCATTTTGAAGCTGCCAAGTTTCCAAGTGGGAATTGGGGTTGGTTTAATTTTCTTATTCCTTATAAGTAACGCAGTGGTTTTCTTAAGGTCTCGATACCCTGTTTTGGGGCTTATGATTGTGATGATTCCATTGTTGCTGATATTCATAATTGGGCTTGCGCTTGTGGGAGGATATAAAATGGAGAGCCGATCAGTGGCTGCATCACCCAAATGGCTGAGGTTGAAGGTATTTAATGAAGAGCATTGGATGGATATTAAGTCTTGCATTTATGATACAGGGGCTTGTGATGATTTGGTCTCCAGAACTCTCATGCTTAAGTCTTATGATTTTAGCCTCAAGAAACTCTCCTCCGTTGAGGTAAATTCTTCTTCCTAA

Protein sequence

MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMKNPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLFLISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNEEHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVEVNSSS

Homology

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BLAST of Lsi06G010990 vs. ExPASy Swiss-Prot
Match: Q1PDI1 (Tetraspanin-15 OS=Arabidopsis thaliana OX=3702 GN=TET15 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 58/139 (41.73%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 73  LATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLFLISNAVVFLRSR 132
           L   T +LS+ +LG+ VW+ Y+R  +CE IL LP  Q    VGL+ +F++SNA +FLR +
Sbjct: 62  LPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQTLASVGLLAVFVVSNAALFLRRK 121

Query: 133 YPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNEE-HWMDIKSCIY 192
           +P+  L+++++ LLL+  IGLA  G  +M+SR   A+  W +LK+ ++   W +IKSC+Y
Sbjct: 122 FPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATRMWFKLKIMDDHVTWNNIKSCVY 181

Query: 193 DTGACDDLVSRTLMLKSYD 211
           D GAC+DL+  +   K Y+
Sbjct: 182 DKGACNDLIYGSPNEKPYN 200

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BLAST of Lsi06G010990 vs. ExPASy Swiss-Prot
Match: Q9M0B7 (Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 6.7e-05
Identity = 48/170 (28.24%), Postives = 78/170 (45.88%), Query Frame = 0


Query: 67  NNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLFLISNAV 126
           N+L   L     +LS+P+L   +W+     ++CE  L  P   +G     +FL +I+ A 
Sbjct: 6   NSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALG-----VFLMIIAIAG 65

Query: 127 VF---LRSRYPVLGLMIVMIPLLLI--------FII-----GLALVGGYKMESRSVAASP 186
           V     R  + +   + VM  L+LI        F++     G  + G    E R  A S 
Sbjct: 66  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYS- 125

Query: 187 KWLRLKVFNEEHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            WL+ +V N +HW  I+SC+Y++  C +L   T      DF  + L++ E
Sbjct: 126 DWLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFE 169

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BLAST of Lsi06G010990 vs. ExPASy Swiss-Prot
Match: Q58G33 (Tetraspanin-14 OS=Arabidopsis thaliana OX=3702 GN=TET14 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.5e-04
Identity = 34/98 (34.69%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 76  MTLILSIPVLGFIVWIFYVRDSEC---ESILKLPSFQVGIGVGLIFLFLISNAVVFLRSR 135
           +T  LS P++G  +++F +R+      +    LP  Q  + V L+ LFL+SN  +FLR R
Sbjct: 20  ITFFLSAPLVGHALYLFCMRNDHVYYRDFQSTLPRVQTLVSVSLLALFLLSNIGMFLRPR 79

Query: 136 YPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASP 171
                   +   L+++F IG A  G YKMESR  + +P
Sbjct: 80  R-------LSYFLVIVFFIGFAYSGVYKMESRRFSPTP 110

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BLAST of Lsi06G010990 vs. ExPASy Swiss-Prot
Match: Q9FIQ5 (Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.6e-04
Identity = 41/159 (25.79%), Postives = 73/159 (45.91%), Query Frame = 0


Query: 67  NNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLFLISNAV 126
           NN+   +  +T++LSIPV+G  +W+     + C  +L+ P   +G+      L L+    
Sbjct: 5   NNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGV------LILLVGLA 64

Query: 127 VFLRSRYPVLGLMIVMIPLLLIFIIGL-ALVG----------GYKMESR-----SVAASP 186
            F+   + +  L++V +  +LI I+ L  LVG          G+   SR     S+    
Sbjct: 65  GFIGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFS 124

Query: 187 KWLRLKVFNEEHWMDIKSCIYDTGACDDLVSRTLMLKSY 210
            WLR +V     W  I++C+  T  C +L  R  + + +
Sbjct: 125 GWLRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDF 157

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BLAST of Lsi06G010990 vs. ExPASy TrEMBL
Match: A0A5A7SX48 (Tetraspanin-15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00220 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.3e-92
Identity = 187/220 (85.00%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAEN+    NNGN  VAEEA A+VAVVEEKPPCKDKELG  GGGGGG   D +P ASK K
Sbjct: 1   MAEND----NNGN-AVAEEARAVVAVVEEKPPCKDKELGDCGGGGGG---DDIPKASKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQ+GIGVGLIFLF
Sbjct: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQIGIGVGLIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISNAVVFLRSRYPVLGL++VM+PLLL+FI+GLALVG YKMESRSVAASPKWLRLKVF+E
Sbjct: 121 LISNAVVFLRSRYPVLGLLVVMVPLLLMFIVGLALVGAYKMESRSVAASPKWLRLKVFDE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            H  DIK+CIYD+GACDDLVSRTLMLKSYDFSLKKLS +E
Sbjct: 181 AHSQDIKTCIYDSGACDDLVSRTLMLKSYDFSLKKLSFIE 212

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BLAST of Lsi06G010990 vs. ExPASy TrEMBL
Match: A0A0A0LWP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G287010 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.3e-92
Identity = 189/223 (84.75%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKEL---GGGGGGGGGGGVDVVPAAS 60
           MAEN     NNGN  VAEEA AIVAVVEEK PCKDKEL   GGGGGGGGGGG D +P AS
Sbjct: 1   MAENE----NNGN-AVAEEARAIVAVVEEKAPCKDKELGDCGGGGGGGGGGGDDDIPKAS 60

Query: 61  KMKNPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLI 120
           K KNP LEINNLEKA+ATMTLILSIPVLGFIVWIFYVR+SECESILKLPSFQ+GIGVGLI
Sbjct: 61  KNKNPLLEINNLEKAIATMTLILSIPVLGFIVWIFYVRESECESILKLPSFQIGIGVGLI 120

Query: 121 FLFLISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKV 180
           FLFLISNAVVFLRSRYPVLGL+IVM+PLLL FIIGLALVG YKMESRSVAASPKWLRLKV
Sbjct: 121 FLFLISNAVVFLRSRYPVLGLLIVMVPLLLTFIIGLALVGAYKMESRSVAASPKWLRLKV 180

Query: 181 FNEEHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
           F++ H  DIK+CIYD+GACDDLVSRTLMLKSYDFSLKKLS +E
Sbjct: 181 FDQAHSQDIKTCIYDSGACDDLVSRTLMLKSYDFSLKKLSFIE 218

[Close]

BLAST of Lsi06G010990 vs. ExPASy TrEMBL
Match: A0A1S3BA91 (tetraspanin-15 OS=Cucumis melo OX=3656 GN=LOC103487487 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.3e-92
Identity = 187/220 (85.00%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAEN+    NNGN  VAEEA A+VAVVEEKPPCKDKELG  GGGGGG   D +P ASK K
Sbjct: 1   MAEND----NNGN-AVAEEARAVVAVVEEKPPCKDKELGDCGGGGGG---DDIPKASKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQ+GIGVGLIFLF
Sbjct: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQIGIGVGLIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISNAVVFLRSRYPVLGL++VM+PLLL+FI+GLALVG YKMESRSVAASPKWLRLKVF+E
Sbjct: 121 LISNAVVFLRSRYPVLGLLVVMVPLLLMFIVGLALVGAYKMESRSVAASPKWLRLKVFDE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            H  DIK+CIYD+GACDDLVSRTLMLKSYDFSLKKLS +E
Sbjct: 181 AHSQDIKTCIYDSGACDDLVSRTLMLKSYDFSLKKLSFIE 212

[Close]

BLAST of Lsi06G010990 vs. ExPASy TrEMBL
Match: A0A6J1E1M8 (tetraspanin-15-like OS=Cucurbita moschata OX=3662 GN=LOC111430019 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 1.4e-82
Identity = 176/220 (80.00%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAENNN N      VVAEEA AIV V  E  PC DKE GG GGGG       VP A+K K
Sbjct: 1   MAENNNAN------VVAEEAVAIVPV--EDKPCTDKEAGGSGGGGD------VP-ATKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNL+KALATMTLI SIP+LGFIVWIFYVR S+CESILKLPSFQV IG+ LIFLF
Sbjct: 61  NPFLEINNLDKALATMTLIFSIPILGFIVWIFYVRYSDCESILKLPSFQVEIGIALIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISN VVFLRSR+PVLGL+IVM+PLLLIFIIGLALVG YKMESRSVAASPKWLRLKVF+E
Sbjct: 121 LISNGVVFLRSRHPVLGLLIVMVPLLLIFIIGLALVGAYKMESRSVAASPKWLRLKVFDE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            HW DIKSCIYDTGACDDLVSRTLMLKSYDFSLKKL+S+E
Sbjct: 181 AHWQDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLTSIE 205

[Close]

BLAST of Lsi06G010990 vs. ExPASy TrEMBL
Match: A0A6J1JJ12 (tetraspanin-15-like OS=Cucurbita maxima OX=3661 GN=LOC111485033 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.9e-81
Identity = 174/225 (77.33%), Postives = 187/225 (83.11%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAENNN N      VVAEE    +  VE+K PC DKE GG GGG        VP A+K K
Sbjct: 1   MAENNNAN------VVAEEQ---IVPVEDK-PCTDKEAGGSGGGD-------VP-ATKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNL+KALATMTLI SIP+LGFIVWIFYVR S+CESILKLPSFQV IG+ LIFLF
Sbjct: 61  NPFLEINNLDKALATMTLIFSIPILGFIVWIFYVRYSDCESILKLPSFQVEIGIALIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISN VVFLRSR+PVLGL+IVM+PLLLIFIIGLALVG YKMESRSVAASPKWLRLKVF+E
Sbjct: 121 LISNGVVFLRSRHPVLGLLIVMVPLLLIFIIGLALVGAYKMESRSVAASPKWLRLKVFDE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVEVNSSS 226
            HW DIKSCIYDTGACDDLVSRTLMLKSYDFSLKKL+S+EV   S
Sbjct: 181 AHWQDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLTSIEVKQQS 207

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BLAST of Lsi06G010990 vs. NCBI nr
Match: XP_038878554.1 (tetraspanin-15 [Benincasa hispida])

HSP 1 Score: 370.2 bits (949), Expect = 1.3e-98
Identity = 194/220 (88.18%), Postives = 202/220 (91.82%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAENNNNNGN     VAEEAGAIVAVVEEKPPCKDKEL       GGGG D++PAASK K
Sbjct: 1   MAENNNNNGN----AVAEEAGAIVAVVEEKPPCKDKEL-------GGGGEDIIPAASKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNLEK LAT+TLILSIPVLGFIVWIFYVRDSECESILKLPSFQ+GIGVGLIFLF
Sbjct: 61  NPFLEINNLEKILATLTLILSIPVLGFIVWIFYVRDSECESILKLPSFQIGIGVGLIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISNAVVFLRSRYPVLGL+IVM+PLLLIFIIGLALVG YKMESRSVAASPKWLRLKVFNE
Sbjct: 121 LISNAVVFLRSRYPVLGLLIVMVPLLLIFIIGLALVGAYKMESRSVAASPKWLRLKVFNE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            HW DIKSCIYDTGACDDL+SRTLMLKSYDFSLKKLSS+E
Sbjct: 181 AHWQDIKSCIYDTGACDDLISRTLMLKSYDFSLKKLSSIE 209

[Close]

BLAST of Lsi06G010990 vs. NCBI nr
Match: XP_004151159.2 (tetraspanin-15 [Cucumis sativus] >KGN65267.1 hypothetical protein Csa_019931 [Cucumis sativus])

HSP 1 Score: 347.8 bits (891), Expect = 6.9e-92
Identity = 189/223 (84.75%), Postives = 200/223 (89.69%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKEL---GGGGGGGGGGGVDVVPAAS 60
           MAEN     NNGN  VAEEA AIVAVVEEK PCKDKEL   GGGGGGGGGGG D +P AS
Sbjct: 1   MAENE----NNGN-AVAEEARAIVAVVEEKAPCKDKELGDCGGGGGGGGGGGDDDIPKAS 60

Query: 61  KMKNPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLI 120
           K KNP LEINNLEKA+ATMTLILSIPVLGFIVWIFYVR+SECESILKLPSFQ+GIGVGLI
Sbjct: 61  KNKNPLLEINNLEKAIATMTLILSIPVLGFIVWIFYVRESECESILKLPSFQIGIGVGLI 120

Query: 121 FLFLISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKV 180
           FLFLISNAVVFLRSRYPVLGL+IVM+PLLL FIIGLALVG YKMESRSVAASPKWLRLKV
Sbjct: 121 FLFLISNAVVFLRSRYPVLGLLIVMVPLLLTFIIGLALVGAYKMESRSVAASPKWLRLKV 180

Query: 181 FNEEHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
           F++ H  DIK+CIYD+GACDDLVSRTLMLKSYDFSLKKLS +E
Sbjct: 181 FDQAHSQDIKTCIYDSGACDDLVSRTLMLKSYDFSLKKLSFIE 218

[Close]

BLAST of Lsi06G010990 vs. NCBI nr
Match: XP_008444036.1 (PREDICTED: tetraspanin-15 [Cucumis melo] >KAA0035123.1 tetraspanin-15 [Cucumis melo var. makuwa] >TYJ95957.1 tetraspanin-15 [Cucumis melo var. makuwa])

HSP 1 Score: 347.8 bits (891), Expect = 6.9e-92
Identity = 187/220 (85.00%), Postives = 200/220 (90.91%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAEN+    NNGN  VAEEA A+VAVVEEKPPCKDKELG  GGGGGG   D +P ASK K
Sbjct: 1   MAEND----NNGN-AVAEEARAVVAVVEEKPPCKDKELGDCGGGGGG---DDIPKASKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQ+GIGVGLIFLF
Sbjct: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQIGIGVGLIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISNAVVFLRSRYPVLGL++VM+PLLL+FI+GLALVG YKMESRSVAASPKWLRLKVF+E
Sbjct: 121 LISNAVVFLRSRYPVLGLLVVMVPLLLMFIVGLALVGAYKMESRSVAASPKWLRLKVFDE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            H  DIK+CIYD+GACDDLVSRTLMLKSYDFSLKKLS +E
Sbjct: 181 AHSQDIKTCIYDSGACDDLVSRTLMLKSYDFSLKKLSFIE 212

[Close]

BLAST of Lsi06G010990 vs. NCBI nr
Match: KAG6589743.1 (Tetraspanin-15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318.2 bits (814), Expect = 5.9e-83
Identity = 177/220 (80.45%), Postives = 188/220 (85.45%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAENNN N      VVAEEA AIV V  E  PC DKE GGGGGGG       VP A+K K
Sbjct: 1   MAENNNAN------VVAEEAVAIVPV--EDKPCTDKEAGGGGGGGD------VP-ATKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNL+KALATMTLI SIP+LGFIVWIFYVR S+CESILKLPSFQV IG+ LIFLF
Sbjct: 61  NPFLEINNLDKALATMTLIFSIPILGFIVWIFYVRYSDCESILKLPSFQVEIGIALIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISN VVFLRSR+PVLGL+IVM+PLLLIFIIGLALVG YKMESRSVAASPKWLRLKVF+E
Sbjct: 121 LISNGVVFLRSRHPVLGLLIVMVPLLLIFIIGLALVGAYKMESRSVAASPKWLRLKVFDE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            HW DIKSCIYDTGACDDLVSRTLMLKSYDFSLKKL+S+E
Sbjct: 181 AHWQDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLTSIE 205

[Close]

BLAST of Lsi06G010990 vs. NCBI nr
Match: XP_022921887.1 (tetraspanin-15-like [Cucurbita moschata] >KAG7023418.1 Tetraspanin-15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.8 bits (808), Expect = 2.9e-82
Identity = 176/220 (80.00%), Postives = 187/220 (85.00%), Query Frame = 0


Query: 1   MAENNNNNGNNGNPVVAEEAGAIVAVVEEKPPCKDKELGGGGGGGGGGGVDVVPAASKMK 60
           MAENNN N      VVAEEA AIV V  E  PC DKE GG GGGG       VP A+K K
Sbjct: 1   MAENNNAN------VVAEEAVAIVPV--EDKPCTDKEAGGSGGGGD------VP-ATKNK 60

Query: 61  NPFLEINNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLF 120
           NPFLEINNL+KALATMTLI SIP+LGFIVWIFYVR S+CESILKLPSFQV IG+ LIFLF
Sbjct: 61  NPFLEINNLDKALATMTLIFSIPILGFIVWIFYVRYSDCESILKLPSFQVEIGIALIFLF 120

Query: 121 LISNAVVFLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNE 180
           LISN VVFLRSR+PVLGL+IVM+PLLLIFIIGLALVG YKMESRSVAASPKWLRLKVF+E
Sbjct: 121 LISNGVVFLRSRHPVLGLLIVMVPLLLIFIIGLALVGAYKMESRSVAASPKWLRLKVFDE 180

Query: 181 EHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            HW DIKSCIYDTGACDDLVSRTLMLKSYDFSLKKL+S+E
Sbjct: 181 AHWQDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLTSIE 205

[Close]

BLAST of Lsi06G010990 vs. TAIR 10
Match: AT5G57810.1 (tetraspanin15 )

HSP 1 Score: 116.3 bits (290), Expect = 3.2e-26
Identity = 58/139 (41.73%), Postives = 92/139 (66.19%), Query Frame = 0


Query: 73  LATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLFLISNAVVFLRSR 132
           L   T +LS+ +LG+ VW+ Y+R  +CE IL LP  Q    VGL+ +F++SNA +FLR +
Sbjct: 62  LPIFTFVLSLTLLGYAVWLLYMRSYDCEDILGLPRVQTLASVGLLAVFVVSNAALFLRRK 121

Query: 133 YPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASPKWLRLKVFNEE-HWMDIKSCIY 192
           +P+  L+++++ LLL+  IGLA  G  +M+SR   A+  W +LK+ ++   W +IKSC+Y
Sbjct: 122 FPMPALVVMVVVLLLMLFIGLAYAGVNEMQSRRFPATRMWFKLKIMDDHVTWNNIKSCVY 181

Query: 193 DTGACDDLVSRTLMLKSYD 211
           D GAC+DL+  +   K Y+
Sbjct: 182 DKGACNDLIYGSPNEKPYN 200

[Close]

BLAST of Lsi06G010990 vs. TAIR 10
Match: AT4G30430.1 (tetraspanin9 )

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 48/170 (28.24%), Postives = 78/170 (45.88%), Query Frame = 0


Query: 67  NNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLFLISNAV 126
           N+L   L     +LS+P+L   +W+     ++CE  L  P   +G     +FL +I+ A 
Sbjct: 6   NSLVGILNFFVFLLSVPILSTGIWLSLKATTQCERFLDKPMIALG-----VFLMIIAIAG 65

Query: 127 VF---LRSRYPVLGLMIVMIPLLLI--------FII-----GLALVGGYKMESRSVAASP 186
           V     R  + +   + VM  L+LI        F++     G  + G    E R  A S 
Sbjct: 66  VVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVTSKGSGETIQGKAYKEYRLEAYS- 125

Query: 187 KWLRLKVFNEEHWMDIKSCIYDTGACDDLVSRTLMLKSYDFSLKKLSSVE 221
            WL+ +V N +HW  I+SC+Y++  C +L   T      DF  + L++ E
Sbjct: 126 DWLQRRVNNAKHWNSIRSCLYESKFCYNLELVTANHTVSDFYKEDLTAFE 169

[Close]

BLAST of Lsi06G010990 vs. TAIR 10
Match: AT2G01960.1 (tetraspanin14 )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 34/98 (34.69%), Postives = 53/98 (54.08%), Query Frame = 0


Query: 76  MTLILSIPVLGFIVWIFYVRDSEC---ESILKLPSFQVGIGVGLIFLFLISNAVVFLRSR 135
           +T  LS P++G  +++F +R+      +    LP  Q  + V L+ LFL+SN  +FLR R
Sbjct: 20  ITFFLSAPLVGHALYLFCMRNDHVYYRDFQSTLPRVQTLVSVSLLALFLLSNIGMFLRPR 79

Query: 136 YPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAASP 171
                   +   L+++F IG A  G YKMESR  + +P
Sbjct: 80  R-------LSYFLVIVFFIGFAYSGVYKMESRRFSPTP 110

[Close]

BLAST of Lsi06G010990 vs. TAIR 10
Match: AT5G46700.1 (Tetraspanin family protein )

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-05
Identity = 41/159 (25.79%), Postives = 73/159 (45.91%), Query Frame = 0


Query: 67  NNLEKALATMTLILSIPVLGFIVWIFYVRDSECESILKLPSFQVGIGVGLIFLFLISNAV 126
           NN+   +  +T++LSIPV+G  +W+     + C  +L+ P   +G+      L L+    
Sbjct: 5   NNVIGCINFITVLLSIPVIGAGIWLAIGTVNSCVKLLQWPVIILGV------LILLVGLA 64

Query: 127 VFLRSRYPVLGLMIVMIPLLLIFIIGL-ALVG----------GYKMESR-----SVAASP 186
            F+   + +  L++V +  +LI I+ L  LVG          G+   SR     S+    
Sbjct: 65  GFIGGFWRITWLLVVYLIAMLILIVLLGCLVGFIYMVTIRGSGHPEPSRAYLEYSLQDFS 124

Query: 187 KWLRLKVFNEEHWMDIKSCIYDTGACDDLVSRTLMLKSY 210
            WLR +V     W  I++C+  T  C +L  R  + + +
Sbjct: 125 GWLRRRVQRSYKWERIRTCLSTTTICPELNQRYTLAQDF 157

[Close]

BLAST of Lsi06G010990 vs. TAIR 10
Match: AT3G45600.1 (tetraspanin3 )

HSP 1 Score: 43.5 bits (101), Expect = 2.6e-04
Identity = 50/174 (28.74%), Postives = 82/174 (47.13%), Query Frame = 0


Query: 67  NNLEKALATMTLILSIPVLGFIVWI-FYVRDSECESILKLPSFQVGIGVGLIFLFLISNA 126
           N+L   +  +T +LSIP+LG  +W+      ++C   L+ P   +GI + ++ L   + A
Sbjct: 5   NHLIGLVNFLTFLLSIPILGGGIWLSSRANSTDCLRFLQWPLIVIGISIMVVSLAGFAGA 64

Query: 127 VV---FLRSRYPVLGLMIVMIPLLLIFIIGLALVGGYKMESRSVAAS----------PKW 186
                FL   Y  L +M+++I  L+ FII  A     K   R+V               W
Sbjct: 65  CYRNKFLMWLY--LVVMLLIIAALIGFII-FAYAVTDKGSGRTVLNRGYLDYYLEDYSGW 124

Query: 187 LRLKVFNEEHWMDIKSCIYDTGACDDL------VSRTLMLKSYDFSLKKLSSVE 221
           L+ +V ++ +W  I SC+ D+GAC  +      V  T  +    F L++LS VE
Sbjct: 125 LKDRVSDDSYWGKISSCLRDSGACRKIGRNFNGVPETADM----FFLRRLSPVE 171

The following BLAST results are available for this feature:

BLAST of Lsi06G010990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PDI1	4.4e-25	41.73	Tetraspanin-15 OS=Arabidopsis thaliana OX=3702 GN=TET15 PE=2 SV=1	[more]
Q9M0B7	6.7e-05	28.24	Tetraspanin-9 OS=Arabidopsis thaliana OX=3702 GN=TET9 PE=2 SV=1	[more]
Q58G33	2.5e-04	34.69	Tetraspanin-14 OS=Arabidopsis thaliana OX=3702 GN=TET14 PE=2 SV=1	[more]
Q9FIQ5	5.6e-04	25.79	Protein TORNADO 2 OS=Arabidopsis thaliana OX=3702 GN=TRN2 PE=1 SV=1	[more]

BLAST of Lsi06G010990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SX48	3.3e-92	85.00	Tetraspanin-15 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00220...	[more]
A0A0A0LWP5	3.3e-92	84.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G287010 PE=4 SV=1	[more]
A0A1S3BA91	3.3e-92	85.00	tetraspanin-15 OS=Cucumis melo OX=3656 GN=LOC103487487 PE=4 SV=1	[more]
A0A6J1E1M8	1.4e-82	80.00	tetraspanin-15-like OS=Cucurbita moschata OX=3662 GN=LOC111430019 PE=4 SV=1	[more]
A0A6J1JJ12	5.9e-81	77.33	tetraspanin-15-like OS=Cucurbita maxima OX=3661 GN=LOC111485033 PE=4 SV=1	[more]

BLAST of Lsi06G010990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878554.1	1.3e-98	88.18	tetraspanin-15 [Benincasa hispida]	[more]
XP_004151159.2	6.9e-92	84.75	tetraspanin-15 [Cucumis sativus] >KGN65267.1 hypothetical protein Csa_019931 [Cu...	[more]
XP_008444036.1	6.9e-92	85.00	PREDICTED: tetraspanin-15 [Cucumis melo] >KAA0035123.1 tetraspanin-15 [Cucumis m...	[more]
KAG6589743.1	5.9e-83	80.45	Tetraspanin-15, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022921887.1	2.9e-82	80.00	tetraspanin-15-like [Cucurbita moschata] >KAG7023418.1 Tetraspanin-15 [Cucurbita...	[more]

BLAST of Lsi06G010990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57810.1	3.2e-26	41.73	tetraspanin15	[more]
AT4G30430.1	4.7e-06	28.24	tetraspanin9	[more]
AT2G01960.1	1.8e-05	34.69	tetraspanin14	[more]
AT5G46700.1	4.0e-05	25.79	Tetraspanin family protein	[more]
AT3G45600.1	2.6e-04	28.74	tetraspanin3	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044991	Tetraspani, plant	PANTHER	PTHR32191	TETRASPANIN-8-RELATED	coord: 54..221
None	No IPR available	PANTHER	PTHR32191:SF47	TETRASPANIN-14-RELATED	coord: 54..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G010990.1	Lsi06G010990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma