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Lsi06G010810 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGAGGGTTATCGGAATTAACTTTTAAGATGGTGGAATATTCTAAGAAATTTAATGGTAGAATTCGTATTGCCCACTTGTTCTCTGTCATTCATGAAAAAGGATGCGGCCGTAATTGATTTCCACGAGCATTCATTTCAGATTTTCCGTAATAATCCAACCAGACGACAATGGCGATCGTAGATTCAAGTTTTATCTTCATCGGTTTCTCCGCCGTACCTTATCCCCTTTCGAACAACAATAATGGCAGAAAATTCCGAATCACATCGGCAAAACGTACACAAAATTCCGATTCCGATTCCACTTCATCAACACAAGCAAATCAACTCAAATTTCCCTCACTCAGAGTATCAAATCCGCTTCTCGCCCGATCTGTCGTTTCGGTTCTCGGATTAGGGTTCGTCGATGCAGGGTATGAAAAATTTTACCTCTAATTTCGATTGAGAATCGCTTTGTTTGTTTTGTTTTCACTGAAATTGAAGTCGAATTAGGGTTTGGAATGATTAGGTACAGTGGTGATTGGTCTAGAATTGGAGCAATTACGAAGGAGAGCGAAGATTTGCTCAAGATTGGAGCCTTTTTGGTGGTTCCGTTTTGCGTATTTCTGGTTTTTTCTTTCTCGAAATTAGATTTAGATTCGAATTCTTCTTAAGTGTATGTATTTGATAGCATCTCAAAAATAAAAAAAGATTAACTCTGCAAGTTGAATCAAATTATGCCTTAGTGTTTGTCTCTTAGACCAACTATATATAGCTGGATCTACCAATGAGATTATACATAACAATTAAAGAGATATTTGAGGTACGCTAAAAATATTCTTAATTCTCTATTCTCT CAAGAGGGTTATCGGAATTAACTTTTAAGATGGTGGAATATTCTAAGAAATTTAATGGTAGAATTCGTATTGCCCACTTGTTCTCTGTCATTCATGAAAAAGGATGCGGCCGTAATTGATTTCCACGAGCATTCATTTCAGATTTTCCGTAATAATCCAACCAGACGACAATGGCGATCGTAGATTCAAGTTTTATCTTCATCGGTTTCTCCGCCGTACCTTATCCCCTTTCGAACAACAATAATGGCAGAAAATTCCGAATCACATCGGCAAAACGTACACAAAATTCCGATTCCGATTCCACTTCATCAACACAAGCAAATCAACTCAAATTTCCCTCACTCAGAGTATCAAATCCGCTTCTCGCCCGATCTGTCGTTTCGGTTCTCGGATTAGGGTTCGTCGATGCAGGGTACAGTGGTGATTGGTCTAGAATTGGAGCAATTACGAAGGAGAGCGAAGATTTGCTCAAGATTGGAGCCTTTTTGGTGGTTCCGTTTTGCGTATTTCTGGTTTTTTCTTTCTCGAAATTAGATTTAGATTCGAATTCTTCTTAAGTGTATGTATTTGATAGCATCTCAAAAATAAAAAAAGATTAACTCTGCAAGTTGAATCAAATTATGCCTTAGTGTTTGTCTCTTAGACCAACTATATATAGCTGGATCTACCAATGAGATTATACATAACAATTAAAGAGATATTTGAGGTACGCTAAAAATATTCTTAATTCTCTATTCTCT ATGGCGATCGTAGATTCAAGTTTTATCTTCATCGGTTTCTCCGCCGTACCTTATCCCCTTTCGAACAACAATAATGGCAGAAAATTCCGAATCACATCGGCAAAACGTACACAAAATTCCGATTCCGATTCCACTTCATCAACACAAGCAAATCAACTCAAATTTCCCTCACTCAGAGTATCAAATCCGCTTCTCGCCCGATCTGTCGTTTCGGTTCTCGGATTAGGGTTCGTCGATGCAGGGTACAGTGGTGATTGGTCTAGAATTGGAGCAATTACGAAGGAGAGCGAAGATTTGCTCAAGATTGGAGCCTTTTTGGTGGTTCCGTTTTGCGTATTTCTGGTTTTTTCTTTCTCGAAATTAGATTTAGATTCGAATTCTTCTTAA MAIVDSSFIFIGFSAVPYPLSNNNNGRKFRITSAKRTQNSDSDSTSSTQANQLKFPSLRVSNPLLARSVVSVLGLGFVDAGYSGDWSRIGAITKESEDLLKIGAFLVVPFCVFLVFSFSKLDLDSNSS Homology
BLAST of Lsi06G010810 vs. ExPASy TrEMBL
Match: A0A0A0LWH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257930 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 1.1e-52 Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Lsi06G010810 vs. ExPASy TrEMBL
Match: A0A1S3B903 (uncharacterized protein LOC103487329 OS=Cucumis melo OX=3656 GN=LOC103487329 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.2e-50 Identity = 112/129 (86.82%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of Lsi06G010810 vs. ExPASy TrEMBL
Match: A0A6J1EZT4 (uncharacterized protein LOC111440861 OS=Cucurbita moschata OX=3662 GN=LOC111440861 PE=4 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 1.7e-40 Identity = 97/121 (80.17%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of Lsi06G010810 vs. ExPASy TrEMBL
Match: A0A6J1KT82 (uncharacterized protein LOC111498016 OS=Cucurbita maxima OX=3661 GN=LOC111498016 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.2e-40 Identity = 97/121 (80.17%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of Lsi06G010810 vs. ExPASy TrEMBL
Match: A0A6J1C0R6 (uncharacterized protein LOC111007301 OS=Momordica charantia OX=3673 GN=LOC111007301 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35 Identity = 87/118 (73.73%), Postives = 94/118 (79.66%), Query Frame = 0
BLAST of Lsi06G010810 vs. NCBI nr
Match: XP_004146667.1 (uncharacterized protein LOC101206545 [Cucumis sativus] >KGN65187.1 hypothetical protein Csa_020133 [Cucumis sativus]) HSP 1 Score: 215.7 bits (548), Expect = 2.3e-52 Identity = 112/126 (88.89%), Postives = 117/126 (92.86%), Query Frame = 0
BLAST of Lsi06G010810 vs. NCBI nr
Match: XP_008443827.1 (PREDICTED: uncharacterized protein LOC103487329 [Cucumis melo]) HSP 1 Score: 206.8 bits (525), Expect = 1.1e-49 Identity = 112/129 (86.82%), Postives = 117/129 (90.70%), Query Frame = 0
BLAST of Lsi06G010810 vs. NCBI nr
Match: XP_038879768.1 (uncharacterized protein LOC120071517 [Benincasa hispida]) HSP 1 Score: 201.8 bits (512), Expect = 3.5e-48 Identity = 107/126 (84.92%), Postives = 115/126 (91.27%), Query Frame = 0
BLAST of Lsi06G010810 vs. NCBI nr
Match: XP_023531156.1 (uncharacterized protein LOC111793484 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.9 bits (455), Expect = 1.4e-41 Identity = 97/121 (80.17%), Postives = 107/121 (88.43%), Query Frame = 0
BLAST of Lsi06G010810 vs. NCBI nr
Match: XP_022933449.1 (uncharacterized protein LOC111440861 [Cucurbita moschata] >KAG6587801.1 hypothetical protein SDJN03_16366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035696.1 hypothetical protein SDJN02_02494, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 175.3 bits (443), Expect = 3.5e-40 Identity = 97/121 (80.17%), Postives = 105/121 (86.78%), Query Frame = 0
BLAST of Lsi06G010810 vs. TAIR 10
Match: AT4G30845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 3.6e-19 Identity = 50/103 (48.54%), Postives = 67/103 (65.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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