Lsi06G010670 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G010670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Serine-rich protein-like protein
Location	chr06: 20909231 .. 20909839 (+)
RNA-Seq Expression	Lsi06G010670
Synteny	Lsi06G010670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCTAGAAAATCAAGCGGGCCGGTTCTGAGATCTCTCTCACCTTCTGGGAGACTCTACGGCTCCTATTCTTCTTCTTCGTCTTCTTCCACTTCGGCGTTTGCGTCGTCCACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCCTCTCGTGTTAATCTGCAAGGATCTTCTTCTCCGTCGGCGTCGTCGGTGAGATTTTCACTGGACCGGTCTATTTCTCCGAATCGGCCTATCTCTGTTTTGTCTCGTACCAGTGGGAATCATCAAGTAGTGAAGAGACAGAGCAACCAGAAGAGGACCTGCATGTGTTCCCCAACCACGCATCCTGGTTCGTTCCGGTGTAGTCTCCACAAAGGCGTTCAGTCGCAGCCTTCAACTCCTTACTCGTCTAATCGGCTCAACGCTCGGAGATCGGCGATGACGAACTCTCTAGTTAGGATCGGAGGAGTTGAAGGCGATATATTGAGGCGAGCTTTGGCTTCTCTCATCCGACCTTCGTCTCATAGTCAAAGACGCCGAGCGGATTTCTGTCCAAGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGA

mRNA sequence

ATGGCGGTTTCTTCTAGAAAATCAAGCGGGCCGGTTCTGAGATCTCTCTCACCTTCTGGGAGACTCTACGGCTCCTATTCTTCTTCTTCGTCTTCTTCCACTTCGGCGTTTGCGTCGTCCACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCCTCTCGTGTTAATCTGCAAGGATCTTCTTCTCCGTCGGCGTCGTCGGTGAGATTTTCACTGGACCGGTCTATTTCTCCGAATCGGCCTATCTCTGTTTTGTCTCGTACCAGTGGGAATCATCAAGTAGTGAAGAGACAGAGCAACCAGAAGAGGACCTGCATGTGTTCCCCAACCACGCATCCTGGTTCGTTCCGGTGTAGTCTCCACAAAGGCGTTCAGTCGCAGCCTTCAACTCCTTACTCGTCTAATCGGCTCAACGCTCGGAGATCGGCGATGACGAACTCTCTAGTTAGGATCGGAGGAGTTGAAGGCGATATATTGAGGCGAGCTTTGGCTTCTCTCATCCGACCTTCGTCTCATAGTCAAAGACGCCGAGCGGATTTCTGTCCAAGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGA

Coding sequence (CDS)

ATGGCGGTTTCTTCTAGAAAATCAAGCGGGCCGGTTCTGAGATCTCTCTCACCTTCTGGGAGACTCTACGGCTCCTATTCTTCTTCTTCGTCTTCTTCCACTTCGGCGTTTGCGTCGTCCACATCAAGCTTTTCCACCAGAAACCCTACGTTTTTCCGTAGATCTGTGTCTCCCTCTCGTGTTAATCTGCAAGGATCTTCTTCTCCGTCGGCGTCGTCGGTGAGATTTTCACTGGACCGGTCTATTTCTCCGAATCGGCCTATCTCTGTTTTGTCTCGTACCAGTGGGAATCATCAAGTAGTGAAGAGACAGAGCAACCAGAAGAGGACCTGCATGTGTTCCCCAACCACGCATCCTGGTTCGTTCCGGTGTAGTCTCCACAAAGGCGTTCAGTCGCAGCCTTCAACTCCTTACTCGTCTAATCGGCTCAACGCTCGGAGATCGGCGATGACGAACTCTCTAGTTAGGATCGGAGGAGTTGAAGGCGATATATTGAGGCGAGCTTTGGCTTCTCTCATCCGACCTTCGTCTCATAGTCAAAGACGCCGAGCGGATTTCTGTCCAAGACCGAGCCGGCTTTCAATCATGTCGAAAGCCGATGATCTGTGA

Protein sequence

MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPTFFRRSVSPSRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQRRRADFCPRPSRLSIMSKADDL

Homology

[Close]

BLAST of Lsi06G010670 vs. ExPASy TrEMBL
Match: A0A0A0LW36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.9e-91
Identity = 192/203 (94.58%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPT-FFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGR YGS SS SSSS+SAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR SGNHQVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 203
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Lsi06G010670 vs. ExPASy TrEMBL
Match: A0A5A7U461 (Putative serine-rich protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00290 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.8e-90
Identity = 189/203 (93.10%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPT-FFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGR YGS SS SSSS+SAFASSTSSFST + T FFRRSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTTDHTSFFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR +GNHQVVK+QS+QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 203
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Lsi06G010670 vs. ExPASy TrEMBL
Match: A0A1S4DUZ2 (uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC103487397 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.8e-90
Identity = 189/203 (93.10%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPT-FFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGR YGS SS SSSS+SAFASSTSSFST + T FFRRSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTTDHTSFFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR +GNHQVVK+QS+QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 203
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Lsi06G010670 vs. ExPASy TrEMBL
Match: A0A6J1F5M8 (uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC111441057 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.2e-90
Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGR YGSYSSS SS +SAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  VNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPG 120
           +NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVKRQSNQKRTCMCSPTTHPG
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHPG 120

Query: 121 SFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQ 180
           SFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHSQ
Sbjct: 121 SFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQ 180

Query: 181 RRRADFCPRPSRLSIMSKADDL 203
           RRRADFCPRPSRLS MSKADDL
Sbjct: 181 RRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of Lsi06G010670 vs. ExPASy TrEMBL
Match: A0A6J1HNK6 (uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 9.0e-89
Identity = 186/202 (92.08%), Postives = 192/202 (95.05%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGR YGSYSSS SS +SAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  VNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPG 120
           +NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVKRQSNQKRTCMCSPTTHPG
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHPG 120

Query: 121 SFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQ 180
           SFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHSQ
Sbjct: 121 SFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQ 180

Query: 181 RRRADFCPRPSRLSIMSKADDL 203
           RRRADFCPR SRLS MSKADDL
Sbjct: 181 RRRADFCPRRSRLSNMSKADDL 201

[Close]

BLAST of Lsi06G010670 vs. NCBI nr
Match: XP_038879100.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida])

HSP 1 Score: 352.1 bits (902), Expect = 3.3e-93
Identity = 195/204 (95.59%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSY-SSSSSSSTSAFASSTSSFSTRNPT-FFRRSVSP 60
           MAVSSRKSSGPVLRSLSPSGR YGSY SSSSSSS+SAFASS+SSFSTRNPT FFRRSVSP
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSSSSSSSSAFASSSSSFSTRNPTSFFRRSVSP 60

Query: 61  SRVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTH 120
           SRVNLQGSSSPSASSV FSLDRSISPNRPISVLSRTSGNHQVVK+QSNQKRTCMCSPTTH
Sbjct: 61  SRVNLQGSSSPSASSVSFSLDRSISPNRPISVLSRTSGNHQVVKKQSNQKRTCMCSPTTH 120

Query: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSH 180
           PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD++RRALASLIRPSSH
Sbjct: 121 PGSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVRRALASLIRPSSH 180

Query: 181 SQRRRADFCPRPSRLSIMSKADDL 203
           SQRRRADFCPRPSRLSIMSKADDL
Sbjct: 181 SQRRRADFCPRPSRLSIMSKADDL 204

[Close]

BLAST of Lsi06G010670 vs. NCBI nr
Match: XP_004146710.1 (uncharacterized serine-rich protein C215.13 [Cucumis sativus] >KGN65199.1 hypothetical protein Csa_019907 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 4.0e-91
Identity = 192/203 (94.58%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPT-FFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGR YGS SS SSSS+SAFASSTSSFSTRN T FF RSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTRNATSFFPRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR SGNHQVVK+QS QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRASGNHQVVKKQSQQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 203
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Lsi06G010670 vs. NCBI nr
Match: XP_016899807.1 (PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo] >KAA0050058.1 putative serine-rich protein-like protein [Cucumis melo var. makuwa] >TYK10352.1 putative serine-rich protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 340.5 bits (872), Expect = 9.9e-90
Identity = 189/203 (93.10%), Postives = 194/203 (95.57%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPT-FFRRSVSPS 60
           MAVSSRKSSGPVLRSLSPSGR YGS SS SSSS+SAFASSTSSFST + T FFRRSVSPS
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSCSSYSSSSSSAFASSTSSFSTTDHTSFFRRSVSPS 60

Query: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHP 120
           RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSR +GNHQVVK+QS+QKRTCMCSPTTHP
Sbjct: 61  RVNLQGSSSPSASSVRFSLDRSISPNRPISVLSRATGNHQVVKKQSHQKRTCMCSPTTHP 120

Query: 121 GSFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180
           GSFRCSLHKGVQS PSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS
Sbjct: 121 GSFRCSLHKGVQSHPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHS 180

Query: 181 QRRRADFCPRPSRLSIMSKADDL 203
           QRRR DFCPRPSRLSIMSKADDL
Sbjct: 181 QRRRVDFCPRPSRLSIMSKADDL 203

[Close]

BLAST of Lsi06G010670 vs. NCBI nr
Match: XP_022933728.1 (uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothetical protein SDJN03_16426, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGR YGSYSSS SS +SAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  VNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPG 120
           +NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVKRQSNQKRTCMCSPTTHPG
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHPG 120

Query: 121 SFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQ 180
           SFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHSQ
Sbjct: 121 SFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQ 180

Query: 181 RRRADFCPRPSRLSIMSKADDL 203
           RRRADFCPRPSRLS MSKADDL
Sbjct: 181 RRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of Lsi06G010670 vs. NCBI nr
Match: KAG7021750.1 (hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 339.7 bits (870), Expect = 1.7e-89
Identity = 187/202 (92.57%), Postives = 193/202 (95.54%), Query Frame = 0


Query: 1   MAVSSRKSSGPVLRSLSPSGRLYGSYSSSSSSSTSAFASSTSSFSTRNPTFFRRSVSPSR 60
           MAVSSRKSSGPVLRSLSPSGR YGSYSSS SS +SAFASSTSSFSTRNPTFFRRSVSPSR
Sbjct: 1   MAVSSRKSSGPVLRSLSPSGRFYGSYSSSMSSGSSAFASSTSSFSTRNPTFFRRSVSPSR 60

Query: 61  VNLQGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPG 120
           +NLQ SSSPSASSVRFSLDRSISPNRPISV +R SGN QVVKRQSNQKRTCMCSPTTHPG
Sbjct: 61  INLQPSSSPSASSVRFSLDRSISPNRPISVSTRISGN-QVVKRQSNQKRTCMCSPTTHPG 120

Query: 121 SFRCSLHKGVQSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDILRRALASLIRPSSHSQ 180
           SFRCSLHKGV SQPSTPYSSNRLNARRSAMTNSLVRIGGVEGD+++RALASLIRPSSHSQ
Sbjct: 121 SFRCSLHKGVPSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDLVKRALASLIRPSSHSQ 180

Query: 181 RRRADFCPRPSRLSIMSKADDL 203
           RRRADFCPRPSRLS MSKADDL
Sbjct: 181 RRRADFCPRPSRLSNMSKADDL 201

[Close]

BLAST of Lsi06G010670 vs. TAIR 10
Match: AT5G11090.1 (serine-rich protein-related )

HSP 1 Score: 181.0 bits (458), Expect = 9.4e-46
Identity = 127/219 (57.99%), Postives = 151/219 (68.95%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRLYGSYSSS-SSSSTSAFASST-SSFSTRNPTFF--------- 63
           S  KS+GPVLRS SPSGR  G YS +  SSS+SAFASST SSFS+ +  FF         
Sbjct: 6   SRTKSNGPVLRSQSPSGRFCGGYSRAVPSSSSSAFASSTSSSFSSPSSAFFSNHRHHESN 65

Query: 64  ---RRSVSPSRVNLQGSSSPSASSVRFSLD-RSISP-NRPISVLSR--TSGNHQVVKRQS 123
               RS SP+RVNL  ++ P + S R+SLD RSISP N+ ISV      S NH++ +R  
Sbjct: 66  HSHHRSASPTRVNLY-TAQPMSQSFRYSLDSRSISPTNKSISVSKNQPPSHNHKISRR-- 125

Query: 124 NQKRTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNRLNARRSAMTNSLVRIGGVEG 183
                CMCSPTTHPGSFRCSLHK V     Q +  Y++N LN RRSAMTNSLVRIGGVEG
Sbjct: 126 -----CMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEG 185

Query: 184 DILRRALASLIRPSSHSQRRRADFCPRPSRLSIMSKADD 202
           + +RRAL +LIRPSSH  +RRA + PRPSRLSIM+KAD+
Sbjct: 186 EWVRRALTTLIRPSSHHLKRRAAYQPRPSRLSIMAKADE 216

[Close]

BLAST of Lsi06G010670 vs. TAIR 10
Match: AT5G25280.1 (serine-rich protein-related )

HSP 1 Score: 176.0 bits (445), Expect = 3.0e-44
Identity = 120/217 (55.30%), Postives = 147/217 (67.74%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRLYGSYSS---SSSSSTSAFASST-SSFSTRNPTFF------- 63
           ++R +    LRS SPSGR  G YS+   SSS S+S FASST SSFS+ +  FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ---RRSVSPSRVNLQGSSSPSASSVRFSLD-RSISPNRPISVLSRTSGNHQVVKRQSNQK 123
               RS SP+RVNL  +S+P   S R+S+D RSISPNR I+V S    NH  +    + +
Sbjct: 68  HHQHRSASPTRVNL-FTSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNHHKI---PDSR 127

Query: 124 RTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDIL 183
           R CMCSPTTHPGSFRCSLHK V     Q +  Y++N LN RRSAMTNSLVRIGGVEG+ +
Sbjct: 128 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 187

Query: 184 RRALASLIRPSSHSQRRRADFCPRPSRLSIMSKADDL 203
           RRAL +LIRPSSH  +RR+ + PR SRL+ MSKA+DL
Sbjct: 188 RRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of Lsi06G010670 vs. TAIR 10
Match: AT5G25280.2 (serine-rich protein-related )

HSP 1 Score: 176.0 bits (445), Expect = 3.0e-44
Identity = 120/217 (55.30%), Postives = 147/217 (67.74%), Query Frame = 0


Query: 4   SSRKSSGPVLRSLSPSGRLYGSYSS---SSSSSTSAFASST-SSFSTRNPTFF------- 63
           ++R +    LRS SPSGR  G YS+   SSS S+S FASST SSFS+ +  FF       
Sbjct: 8   TTRSNGSASLRSKSPSGRFCGVYSNRMPSSSPSSSGFASSTSSSFSSPSTAFFSSHNQNN 67

Query: 64  ---RRSVSPSRVNLQGSSSPSASSVRFSLD-RSISPNRPISVLSRTSGNHQVVKRQSNQK 123
               RS SP+RVNL  +S+P   S R+S+D RSISPNR I+V S    NH  +    + +
Sbjct: 68  HHQHRSASPTRVNL-FTSAPMTQSFRYSIDNRSISPNRSIAVSSNKPSNHHKI---PDSR 127

Query: 124 RTCMCSPTTHPGSFRCSLHKGV---QSQPSTPYSSNRLNARRSAMTNSLVRIGGVEGDIL 183
           R CMCSPTTHPGSFRCSLHK V     Q +  Y++N LN RRSAMTNSLVRIGGVEG+ +
Sbjct: 128 RRCMCSPTTHPGSFRCSLHKNVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEGEWV 187

Query: 184 RRALASLIRPSSHSQRRRADFCPRPSRLSIMSKADDL 203
           RRAL +LIRPSSH  +RR+ + PR SRL+ MSKA+DL
Sbjct: 188 RRALTTLIRPSSHQLKRRSAYEPRRSRLASMSKAEDL 220

[Close]

BLAST of Lsi06G010670 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related )

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 57/146 (39.04%), Postives = 75/146 (51.37%), Query Frame = 0


Query: 64  QGSSSPSASSVRFSLDRSISPNRPISVLSRTSGNHQVVKRQSNQKRTCMCSPTTHPGSFR 123
           Q S SP   ++   L      + P   +   S NHQ        KR C+CSPTTHPGSFR
Sbjct: 31  QRSPSPCNKNLNLRLKFYSPGSIPKPSVVTVSSNHQT-------KRKCLCSPTTHPGSFR 90

Query: 124 CSLHKGVQSQPSTPYSS------NR----------LNARRSAMTNSLVRIGGVEGDILRR 183
           CS H+ ++ + S   +S      NR          LN R+ A+ NSL +IG VE +  RR
Sbjct: 91  CSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGLNLRKLALMNSLAKIGSVEAERFRR 150

Query: 184 AL-ASLIRPSSHSQRRRADFCPRPSR 193
           +L A+L +PSS    RR +F PR SR
Sbjct: 151 SLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]

BLAST of Lsi06G010670 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.6e-05
Identity = 18/38 (47.37%), Postives = 26/38 (68.42%), Query Frame = 0


Query: 96  GNHQVVKRQSNQKRTCMCSPTTHPGSFRCSLHKGVQSQ 134
           G+  + ++ S  K  C+CSPTTHPGSFRC +H+ +  Q
Sbjct: 29  GSRGLSRQTSMTKTNCLCSPTTHPGSFRCRIHRSLSLQ 66

The following BLAST results are available for this feature:

BLAST of Lsi06G010670 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi06G010670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW36	1.9e-91	94.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264020 PE=4 SV=1	[more]
A0A5A7U461	4.8e-90	93.10	Putative serine-rich protein-like protein OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S4DUZ2	4.8e-90	93.10	uncharacterized serine-rich protein C215.13-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1F5M8	8.2e-90	92.57	uncharacterized protein LOC111441057 OS=Cucurbita moschata OX=3662 GN=LOC1114410...	[more]
A0A6J1HNK6	9.0e-89	92.08	uncharacterized protein LOC111465917 OS=Cucurbita maxima OX=3661 GN=LOC111465917...	[more]

BLAST of Lsi06G010670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879100.1	3.3e-93	95.59	uncharacterized serine-rich protein C215.13-like [Benincasa hispida]	[more]
XP_004146710.1	4.0e-91	94.58	uncharacterized serine-rich protein C215.13 [Cucumis sativus] >KGN65199.1 hypoth...	[more]
XP_016899807.1	9.9e-90	93.10	PREDICTED: uncharacterized serine-rich protein C215.13-like [Cucumis melo] >KAA0...	[more]
XP_022933728.1	1.7e-89	92.57	uncharacterized protein LOC111441057 [Cucurbita moschata] >KAG6587861.1 hypothet...	[more]
KAG7021750.1	1.7e-89	92.57	hypothetical protein SDJN02_15477, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lsi06G010670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11090.1	9.4e-46	57.99	serine-rich protein-related	[more]
AT5G25280.1	3.0e-44	55.30	serine-rich protein-related	[more]
AT5G25280.2	3.0e-44	55.30	serine-rich protein-related	[more]
AT5G20370.1	1.5e-14	39.04	serine-rich protein-related	[more]
AT1G67910.1	3.6e-05	47.37	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..79
None	No IPR available	PANTHER	PTHR33132	OSJNBB0118P14.9 PROTEIN	coord: 1..202
None	No IPR available	PANTHER	PTHR33132:SF75	SUBFAMILY NOT NAMED	coord: 1..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G010670.1	Lsi06G010670.1	mRNA