Lsi06G010600 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGTTTCAAAAAGCAAAAGAAAATTATTAATATACATCTATGTGTGTAGTGTAGCCCCAACAACACCACGAACTTCCCATTTCCATCAATCAAATTATTGATTTTTTGATTGAATTTGAAATCAGAGAGGTCTGAATTCAATTGGGTTTTCTTCAAATTTCATCATTTTCATCATCTTCTTCCATTCGAACCATCCCTTTTCCTCCAAAACCCAAATGGGTTCGAGTTGTAGTCGTTTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAATTTCTGCTCTCTCTTTTGCGGTGCTTCCTCTTCTCGCGCGATTCATCAGGTTAATTCTTCATTATCATCATCGAATCTTTTGTTCTCTCTTGTTTTCCCCTTTTTCCCATTTCTTGTGCTTCTTCGTCAATTTGAATCTAATTCGTTCTTGGAATCTTGTTTGGATAATCTGGGATTGACCATCTTCATGTCAAAGATTGACCCTCGATAGCATCTTTTAGTTGGAGATGTTCTTTGTGGTTTCGTTTGATTGAAGTCTTGTATCCGTTTGGTGTGCTTTTTAGTTGCTTGAAGTTCTGCGTTGCTTTTAGGGGGATTTTGGATGAGTTTTGATCTACCAAGAGGTGAAGAAGATCGGTGTGTTTCACAGAAATTAGGTCCGAAATTGCTGTAGCTTTCATAATATGTTTGTGTTTGTTTTGCTTTTGCGTGGGATGATGTTTTGTTTTGTTGAGTGTTGATGGGTAATGATCACTATCTGATTGTCTGGATTTTTAACCTTGAACCCCGCAAAAGTTGGTTGGTGGTTGGGGAAGATTGAAAGTTCTTACAGCCTGGAATTGCTTGTCGACCTGAAGTTGAATTCTTGAATGTTTTGCTTGTGTCATTTTTTATGTTTCTGTTGACATCGATCAGAGTGCCTCTCTGTTTCCAATCCTTTTGTAAACGAATAAGGAAAAGAAAAAGATAATTCAAGTGTTGGATTATATTTTTTTGACAATACGTGGGGTGGGGATTGAAACTTAGACCTGAGATTGATTGTACAAGTTCATGCCAATTGGGCTATGTTCATGTTGGATTATGTTACAATTTCTTGTTTAATTTAAAACTTCCATTTTTAGTTTCAGGTTTTGGCAACTGAAATAGCTGTGTCGTGTGTAATGTTGTTTTTGTTGAATTTGCGTGCAAGGCATGCAAAGTGATCATCTAGGTCTTTTGTGCGAATTGACATTTTTTTCTATTAGTCTTTGAAAGAGTAGTTCTATTAGTCATTCTGTTTTCGCTTTAATTCACCTCATTGCTTGTCATTGAGAACATGAATATATTGAAAAGATCAAATATAACTTTGGCCAACAACTTAAACTTTCAGTATTGTTATAATTTAACATGGTATCAAAGTAGGAATTTCTAAGTTTAAATATTTGCAATGTTATTCCAGTTTATTTCTTATGAATGGTCTACCTGTTGGGCTGCATGATATTGAGAATATATTGACAAGAAAAGGTTACACCCATTAGATTGATTTTTTTTTTAGTGCTGTTAACCAAATAGCTTAAGCTTTCGATGCCGTGATAATTTAGCACCCATGCATAAAAGGTATCTGATGCTCTTTATGGCTATGCTTATATTGTTGCATGCTGACAAAATTTTAAATGAATTACTAAGCCAGTTCATCTACATGGCAATATCTTCACTAAATAGAAATCTAATGGAGGTAATTTTACCATTCAAGTCCTAAGTCTAGGCAATTATAATTATTTTCTAACCATCTAAGTTTGTTTTTCGATCACATTTTGAATGGAAATTATTTTCAAGTTTTAACAAGCTTAGATGACAGGTTAACTCTTAAACTGACACCTATTTTTAATAGATGGAAGATTCTACACTTCAATATCTTGTCCATCCGACAGAACGTCAACAATATAATCACAACATTGATGAAGTTCAACTCCCCACAAATGGATCTACAAGAATGGGACTTCCTAGTGCAAGTGCTTATTCTGAGACCTCATTCGAGAACGACATTGCAGTCAATGAGGAACGGAGTGCTGTAGATGATCCAAGAAATATTGATATCAATGTTCATGGGAAGTGTTTGTCTCAAAATAAGGAATTAGCTCTTCAACAGGTTAGTGCTGATTACAGTCATGATGAATCTCATAGATGTAGTAATGCTTCCAATGGTACTTCATTTAAAGGACATCAATCTTCGGAACCAGTATCTGTAAATATTTTGGCTAACGAGGATGCAGTAAATGGCATTGATGGTTCAGTGGGCAAGGGTGTGTCACCAGTCTGCGCGAAGGTCATGTTTGCAGCAAGCAGTTCGACTACTCAAGAGGCTGGAGATTTATGTTCCAATGAGCTGACAGGTTCCATTCAAGAGGACGAGGTGACAGTGTACCAGGACCCAGATTCTGAATCTTCTCCTTCTGGTTCTGGTCTTCCATTAACTTTTCAATCTCTTGGAGATGAATCTTCACAAGAGGTACCCTCAAGTTTAGACACTCTGGTGTTTGATAGTAGGGAGTTAGGCCAAGGAGATGTGGGTATGCCTCATGTTGATATGGTCGGTATTTCTTCCAATGTTTTATCTACAAGTAGCACTGATGCAAGTTCTCTTGAGGTCAGAAGAAATAGCAGAAGACTCTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCATTTGTTTTCCCATCTAATAACTTCAGTAGTACAGGAGATCCAGATAGGTGGCTGCTTGATATAAGTGGTGATTTTATCGATGATGAAGTGAGTGGTGATTCAAGACATTTTTCCAGCAGAATTCACATCTTGAATGAACAACAAAGAAACTCAAGATCTCAGGTTACATTCTGAATATTAACAATTATGAATTTCTTTTGATTATTACTACTTTTTATGTACAATATCTTTTTTTTTCTTAATCTTAAAAAGGCAGTACATATGCAGTGATCCTTTGAATAGAAATAGCAAAAATGCTTTTAGCAATTGTTAGTGTAACTGAGATCAGCTTCATTTAATGTTTTCATTTTAAGCAGTAATAGTACCTAGTCGCAGTCTTCCGTTGTGTTTATTCATAATTGCTTCTCAAATAGATGCAGATATGGGAAAGACTCCGTAGTAGCCTCAGCGAAAACAGTCAGCAGAATTTATCTTGCCCATCAGGCATTCACCTTAATGGTCCTTGCTCGTGTGACTCATTCACAAGGATAGAACACTCAAGTACCCGTGCAAGCATATCACGGATAATCATGCTCGCTGAAGCATTATTTGAGGTAGTTTTCCCCTGATCAATTCTTTAAATTTTAATATGATATTGTGTTAAGTAAACCATACATTAACAGTATGGTGTAGGCATTCACTTTAATTGGTACTCTCTGCCATCAATTACTTTTAGGCCATTAGATATTTCTGATAAAAGTTAAGCACTCAAGCACCGTCTACTTTTTTGTTCTATTGCTGTATTTCAACGGCTATCTCACATCTTGTTCTCTGTGTATCTGAAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCCTTGTCCATGGTTTCACTTCCAGCTCCAGAATCAGTCGTAGACTCTTTTCCTCTGAAGAACCACGAAAAGTCAACTAATGGAGGGGATGAAATTGAGCAGTAGGTTTCCTCTTTCCATTAACTAAGTTGTCAGTGTATGTTATTAAGCATTGATATGGAATGTGATGCACTCCACTCCTCTTATCAAATTGGAATCTTCTCCTTGTGGTTCTGATTTTCATATATAACTAGCAATCCTCTTAATATACTGCTAATGCCATGCTCGCTTAAAATAATGGTTCAAGAGACACTCGTGGAATGTTTTAATTCTGAATAGTTTGCTTGCTTATCAGTATACTTGTTTAAATTCTAATTTGAGAATGTTTACAAATATCTGGTTAGATGCTACATTTGCCTGGCTGAGTATGAAGAGGGTGATAAAATAAGAGTCCTTCCTTGCCGCCATGAGTATCATATGTTATGCGTCGATAAATGGTTGAAGGAGATTCACGGGTATGTCACGTATATATGCTGCCTCTTTACCTATATTATGTCCTGCAATCATTTTTTTCATCAACTCATCTCTCTGCCTCACTGTGTTTAACAGAGTATGCCCACTTTGTAGAGGGGATGTTCGTGCAGGCTCAAACGATGAATGTTCAGTTCCAAACTCTGAAATTCCAACAATATGATAGAATTGTATATTCGGTTATAATAGTGATAACGGAACTCTCATTATCTTGTTTCCTGTTAATACTGGGGATTAACTGAATCCCCATGATTTAATTTTGTAAGGCATCCATATTGTATAGCAGTTTGAGGAAAAATATTTGCACAAGTTCTTTACCCTGAGCCTAAAAATTTGAATGAATAGAAGCCAGTTTGGTTTGAATGGTTCAAACACTTGTACAATATGGCAGGGACAACACCGAAGGAAGGAACTATATCGACATTCGACAACAGATAAACGAGACGGGGAGACAGTAATTTCAGCTGTCTCAGCTTACAACTACTTCAGCGTCGAAAGACCAGTGCTTGGTCTCCAAAATGGGTTCTCATATGCAGGATCGGATCTCATTTGATGATTAGTAGTGTTCTTCGATGTATCGTCGAAGAAAGGATTGTTTTGAAAGCTCTTTGGGTCGTTAATGTTGTTGAAGAGATTTGGCTGGCAGTTCTCGTCGTCCTCAAATGTTGTCCATCGCATTGAGTTGCTGCTATTACGTCGTTTCTCACTTGCTGCATTTCTCTTAATCTCCATCTCTCCCACATGGTCTTTGAACTCTTTCTTCACCACATCAATTACTACATCTCCATAACGATCGCACCATGACCTTTTTATGAAGGGAAAACAATAACGGATCAAATTATCGACTTTGATACTTTTCTTAACTATAAAATGAGGTTTGGATCTTACTTTGGGAAGAAGTTCTTGAGATCAGCCTTGTCAACAGGAAGCCTGGTGGAAATAGCCTCAATTT AAAAGTTTCAAAAAGCAAAAGAAAATTATTAATATACATCTATGTGTGTAGTGTAGCCCCAACAACACCACGAACTTCCCATTTCCATCAATCAAATTATTGATTTTTTGATTGAATTTGAAATCAGAGAGGTCTGAATTCAATTGGGTTTTCTTCAAATTTCATCATTTTCATCATCTTCTTCCATTCGAACCATCCCTTTTCCTCCAAAACCCAAATGGGTTCGAGTTGTAGTCGTTTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAATTTCTGCTCTCTCTTTTGCGGTGCTTCCTCTTCTCGCGCGATTCATCAGATGGAAGATTCTACACTTCAATATCTTGTCCATCCGACAGAACGTCAACAATATAATCACAACATTGATGAAGTTCAACTCCCCACAAATGGATCTACAAGAATGGGACTTCCTAGTGCAAGTGCTTATTCTGAGACCTCATTCGAGAACGACATTGCAGTCAATGAGGAACGGAGTGCTGTAGATGATCCAAGAAATATTGATATCAATGTTCATGGGAAGTGTTTGTCTCAAAATAAGGAATTAGCTCTTCAACAGGTTAGTGCTGATTACAGTCATGATGAATCTCATAGATGTAGTAATGCTTCCAATGGTACTTCATTTAAAGGACATCAATCTTCGGAACCAGTATCTGTAAATATTTTGGCTAACGAGGATGCAGTAAATGGCATTGATGGTTCAGTGGGCAAGGGTGTGTCACCAGTCTGCGCGAAGGTCATGTTTGCAGCAAGCAGTTCGACTACTCAAGAGGCTGGAGATTTATGTTCCAATGAGCTGACAGGTTCCATTCAAGAGGACGAGGTGACAGTGTACCAGGACCCAGATTCTGAATCTTCTCCTTCTGGTTCTGGTCTTCCATTAACTTTTCAATCTCTTGGAGATGAATCTTCACAAGAGGTACCCTCAAGTTTAGACACTCTGGTGTTTGATAGTAGGGAGTTAGGCCAAGGAGATGTGGGTATGCCTCATGTTGATATGGTCGGTATTTCTTCCAATGTTTTATCTACAAGTAGCACTGATGCAAGTTCTCTTGAGGTCAGAAGAAATAGCAGAAGACTCTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCATTTGTTTTCCCATCTAATAACTTCAGTAGTACAGGAGATCCAGATAGGTGGCTGCTTGATATAAGTGGTGATTTTATCGATGATGAAGTGAGTGGTGATTCAAGACATTTTTCCAGCAGAATTCACATCTTGAATGAACAACAAAGAAACTCAAGATCTCAGATATGGGAAAGACTCCGTAGTAGCCTCAGCGAAAACAGTCAGCAGAATTTATCTTGCCCATCAGGCATTCACCTTAATGGTCCTTGCTCGTGTGACTCATTCACAAGGATAGAACACTCAAGTACCCGTGCAAGCATATCACGGATAATCATGCTCGCTGAAGCATTATTTGAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCCTTGTCCATGGTTTCACTTCCAGCTCCAGAATCAGTCGTAGACTCTTTTCCTCTGAAGAACCACGAAAAGTCAACTAATGGAGGGGATGAAATTGAGCAATGCTACATTTGCCTGGCTGAGTATGAAGAGGGTGATAAAATAAGAGTCCTTCCTTGCCGCCATGAGTATCATATGTTATGCGTCGATAAATGGTTGAAGGAGATTCACGGAGTATGCCCACTTTGTAGAGGGGATGTTCGTGCAGGCTCAAACGATGAATGTTCAGTTCCAAACTCTGAAATTCCAACAATATGATAGAATTGTATATTCGGTTATAATAGTGATAACGGAACTCTCATTATCTTGTTTCCTGTTAATACTGGGGATTAACTGAATCCCCATGATTTAATTTTGTAAGGCATCCATATTGTATAGCAGTTTGAGGAAAAATATTTGCACAAGTTCTTTACCCTGAGCCTAAAAATTTGAATGAATAGAAGCCAGTTTGGTTTGAATGGTTCAAACACTTGTACAATATGGCAGGGACAACACCGAAGGAAGGAACTATATCGACATTCGACAACAGATAAACGAGACGGGGAGACAGTAATTTCAGCTGTCTCAGCTTACAACTACTTCAGCGTCGAAAGACCAGTGCTTGGTCTCCAAAATGGGTTCTCATATGCAGGATCGGATCTCATTTGATGATTAGTAGTGTTCTTCGATGTATCGTCGAAGAAAGGATTGTTTTGAAAGCTCTTTGGGTCGTTAATGTTGTTGAAGAGATTTGGCTGGCAGTTCTCGTCGTCCTCAAATGTTGTCCATCGCATTGAGTTGCTGCTATTACGTCGTTTCTCACTTGCTGCATTTCTCTTAATCTCCATCTCTCCCACATGGTCTTTGAACTCTTTCTTCACCACATCAATTACTACATCTCCATAACGATCGCACCATGACCTTTTTATGAAGGGAAAACAATAACGGATCAAATTATCGACTTTGATACTTTTCTTAACTATAAAATGAGGTTTGGATCTTACTTTGGGAAGAAGTTCTTGAGATCAGCCTTGTCAACAGGAAGCCTGGTGGAAATAGCCTCAATTT ATGGGTTCGAGTTGTAGTCGTTTGGGGTCGCGCCCTTCTCGCTCCCGAGATTACCGCACCAACCGCTCCAATTTCTGCTCTCTCTTTTGCGGTGCTTCCTCTTCTCGCGCGATTCATCAGATGGAAGATTCTACACTTCAATATCTTGTCCATCCGACAGAACGTCAACAATATAATCACAACATTGATGAAGTTCAACTCCCCACAAATGGATCTACAAGAATGGGACTTCCTAGTGCAAGTGCTTATTCTGAGACCTCATTCGAGAACGACATTGCAGTCAATGAGGAACGGAGTGCTGTAGATGATCCAAGAAATATTGATATCAATGTTCATGGGAAGTGTTTGTCTCAAAATAAGGAATTAGCTCTTCAACAGGTTAGTGCTGATTACAGTCATGATGAATCTCATAGATGTAGTAATGCTTCCAATGGTACTTCATTTAAAGGACATCAATCTTCGGAACCAGTATCTGTAAATATTTTGGCTAACGAGGATGCAGTAAATGGCATTGATGGTTCAGTGGGCAAGGGTGTGTCACCAGTCTGCGCGAAGGTCATGTTTGCAGCAAGCAGTTCGACTACTCAAGAGGCTGGAGATTTATGTTCCAATGAGCTGACAGGTTCCATTCAAGAGGACGAGGTGACAGTGTACCAGGACCCAGATTCTGAATCTTCTCCTTCTGGTTCTGGTCTTCCATTAACTTTTCAATCTCTTGGAGATGAATCTTCACAAGAGGTACCCTCAAGTTTAGACACTCTGGTGTTTGATAGTAGGGAGTTAGGCCAAGGAGATGTGGGTATGCCTCATGTTGATATGGTCGGTATTTCTTCCAATGTTTTATCTACAAGTAGCACTGATGCAAGTTCTCTTGAGGTCAGAAGAAATAGCAGAAGACTCTTTTGGGATGCCTTTTCAAGACGTAGTTTTAGAAGACATAGTGAATCTCCATTTGTTTTCCCATCTAATAACTTCAGTAGTACAGGAGATCCAGATAGGTGGCTGCTTGATATAAGTGGTGATTTTATCGATGATGAAGTGAGTGGTGATTCAAGACATTTTTCCAGCAGAATTCACATCTTGAATGAACAACAAAGAAACTCAAGATCTCAGATATGGGAAAGACTCCGTAGTAGCCTCAGCGAAAACAGTCAGCAGAATTTATCTTGCCCATCAGGCATTCACCTTAATGGTCCTTGCTCGTGTGACTCATTCACAAGGATAGAACACTCAAGTACCCGTGCAAGCATATCACGGATAATCATGCTCGCTGAAGCATTATTTGAGGTCTTGGATGAAATTCATGGTCAGCCTGTTTCTCTTGCCTTGTCCATGGTTTCACTTCCAGCTCCAGAATCAGTCGTAGACTCTTTTCCTCTGAAGAACCACGAAAAGTCAACTAATGGAGGGGATGAAATTGAGCAATGCTACATTTGCCTGGCTGAGTATGAAGAGGGTGATAAAATAAGAGTCCTTCCTTGCCGCCATGAGTATCATATGTTATGCGTCGATAAATGGTTGAAGGAGATTCACGGAGTATGCCCACTTTGTAGAGGGGATGTTCGTGCAGGCTCAAACGATGAATGTTCAGTTCCAAACTCTGAAATTCCAACAATATGA MGSSCSRLGSRPSRSRDYRTNRSNFCSLFCGASSSRAIHQMEDSTLQYLVHPTERQQYNHNIDEVQLPTNGSTRMGLPSASAYSETSFENDIAVNEERSAVDDPRNIDINVHGKCLSQNKELALQQVSADYSHDESHRCSNASNGTSFKGHQSSEPVSVNILANEDAVNGIDGSVGKGVSPVCAKVMFAASSSTTQEAGDLCSNELTGSIQEDEVTVYQDPDSESSPSGSGLPLTFQSLGDESSQEVPSSLDTLVFDSRELGQGDVGMPHVDMVGISSNVLSTSSTDASSLEVRRNSRRLFWDAFSRRSFRRHSESPFVFPSNNFSSTGDPDRWLLDISGDFIDDEVSGDSRHFSSRIHILNEQQRNSRSQIWERLRSSLSENSQQNLSCPSGIHLNGPCSCDSFTRIEHSSTRASISRIIMLAEALFEVLDEIHGQPVSLALSMVSLPAPESVVDSFPLKNHEKSTNGGDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDVRAGSNDECSVPNSEIPTI Homology
BLAST of Lsi06G010600 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 5.8e-15 Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 7.6e-15 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.3e-14 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy Swiss-Prot
Match: Q90972 (E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus OX=9031 GN=RNF13 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.5e-13 Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy Swiss-Prot
Match: O54965 (E3 ubiquitin-protein ligase RNF13 OS=Mus musculus OX=10090 GN=Rnf13 PE=1 SV=2) HSP 1 Score: 78.6 bits (192), Expect = 2.5e-13 Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy TrEMBL
Match: A0A1S3B977 (uncharacterized protein LOC103487388 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487388 PE=4 SV=1) HSP 1 Score: 949.5 bits (2453), Expect = 6.0e-273 Identity = 489/540 (90.56%), Postives = 509/540 (94.26%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy TrEMBL
Match: A0A1S4DV08 (E3 ubiquitin-protein ligase RNF12-A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487388 PE=4 SV=1) HSP 1 Score: 944.5 bits (2440), Expect = 1.9e-271 Identity = 489/542 (90.22%), Postives = 509/542 (93.91%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy TrEMBL
Match: A0A0A0LTU1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G265080 PE=4 SV=1) HSP 1 Score: 939.5 bits (2427), Expect = 6.2e-270 Identity = 483/541 (89.28%), Postives = 502/541 (92.79%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy TrEMBL
Match: A0A6J1E1R4 (uncharacterized RING finger protein C4G3.12c-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430037 PE=4 SV=1) HSP 1 Score: 868.6 bits (2243), Expect = 1.3e-248 Identity = 457/540 (84.63%), Postives = 477/540 (88.33%), Query Frame = 0
BLAST of Lsi06G010600 vs. ExPASy TrEMBL
Match: A0A5D3BXE6 (E3 ubiquitin-protein ligase RNF12-A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00810 PE=4 SV=1) HSP 1 Score: 868.2 bits (2242), Expect = 1.8e-248 Identity = 450/502 (89.64%), Postives = 470/502 (93.63%), Query Frame = 0
BLAST of Lsi06G010600 vs. NCBI nr
Match: XP_038876907.1 (uncharacterized protein LOC120069259 isoform X2 [Benincasa hispida]) HSP 1 Score: 982.2 bits (2538), Expect = 1.7e-282 Identity = 503/541 (92.98%), Postives = 518/541 (95.75%), Query Frame = 0
BLAST of Lsi06G010600 vs. NCBI nr
Match: XP_038876906.1 (uncharacterized protein LOC120069259 isoform X1 [Benincasa hispida]) HSP 1 Score: 977.2 bits (2525), Expect = 5.6e-281 Identity = 503/543 (92.63%), Postives = 518/543 (95.40%), Query Frame = 0
BLAST of Lsi06G010600 vs. NCBI nr
Match: XP_008443909.1 (PREDICTED: uncharacterized protein LOC103487388 isoform X2 [Cucumis melo]) HSP 1 Score: 949.5 bits (2453), Expect = 1.2e-272 Identity = 489/540 (90.56%), Postives = 509/540 (94.26%), Query Frame = 0
BLAST of Lsi06G010600 vs. NCBI nr
Match: XP_016899819.1 (PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like isoform X1 [Cucumis melo]) HSP 1 Score: 944.5 bits (2440), Expect = 4.0e-271 Identity = 489/542 (90.22%), Postives = 509/542 (93.91%), Query Frame = 0
BLAST of Lsi06G010600 vs. NCBI nr
Match: XP_004146706.1 (uncharacterized protein LOC101215855 isoform X2 [Cucumis sativus] >KGN65208.1 hypothetical protein Csa_019864 [Cucumis sativus]) HSP 1 Score: 939.5 bits (2427), Expect = 1.3e-269 Identity = 483/541 (89.28%), Postives = 502/541 (92.79%), Query Frame = 0
BLAST of Lsi06G010600 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein ) HSP 1 Score: 149.8 bits (377), Expect = 6.2e-36 Identity = 88/176 (50.00%), Postives = 111/176 (63.07%), Query Frame = 0
BLAST of Lsi06G010600 vs. TAIR 10
Match: AT5G45290.2 (RING/U-box superfamily protein ) HSP 1 Score: 146.0 bits (367), Expect = 8.9e-35 Identity = 88/177 (49.72%), Postives = 111/177 (62.71%), Query Frame = 0
BLAST of Lsi06G010600 vs. TAIR 10
Match: AT4G09560.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 75.1 bits (183), Expect = 1.9e-13 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Lsi06G010600 vs. TAIR 10
Match: AT1G35625.1 (RING/U-box superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 2.1e-12 Identity = 25/76 (32.89%), Postives = 44/76 (57.89%), Query Frame = 0
BLAST of Lsi06G010600 vs. TAIR 10
Match: AT1G71980.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 70.9 bits (172), Expect = 3.6e-12 Identity = 36/95 (37.89%), Postives = 48/95 (50.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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