Lsi06G009780 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G009780
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionTPR_REGION domain-containing protein
Locationchr06: 19769044 .. 19770442 (+)
RNA-Seq ExpressionLsi06G009780
SyntenyLsi06G009780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCTAAAACCCAAACATACGAGAAATAAATAAAACCTCGTGCACCGGTACACGGTTTTTCTTAGTTGTCACAAAACCAACGTCTCAGATTTAATCTTCAATTTCCCTCCTTCCCCACAATTTCTCTTATAAAAATCCTCCCTTTGCCGCCATTGTTTTAGGTCAGCCCTCCCTCAAGCAACTTTCACACAGCACCAGAAGCTAAGAACATCTCATTTCTGTAAACACGCAACTTCTAAATTTTCAGAATTATGCTCCTCAGAAGTGCTTCCACTCCCCTTCTCAATTCATGGTTACACCATTCAAGAGATTCATCCATAGAGGCGGAGATTGTGCACCAAATCCCCAAATCGCGTTCCATTCTCCTCTCTGGCTCTCCCACTTGCTTATCTCCCATTATCGACGATTCCCCACGGATGATTACTCGAGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCATGTCTAAGATGAAACCCTTTTGCAGAACTCTAAGTGGGTTTTCTGAGGTGGTTGAAGAGATAGATGCGGTTGGCTTTACCCGCTCCAAAACGGCGTCTTTGAGCTGTGGGTTTATTTCTGAAACTGGGGATGGGGATGGTGGGTTTGTTAGTGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCCATGGCGGTGGAGGATCTGATGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATTTATACTATCAAAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGTTTCTTGAAAGAGGTAAATATATATTCAAATTCAAGTCCCAATTGCTATATGATTGAAGAAAAACTGTTGTCTAGTTTCAAAGATTGTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTATTTATGATGAATTGTTTCGGGTAATAGGTACGCGGGGATCTTGTGAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCAGGCGATGGTAATGTCTTGTCCATGTACGCTGATCTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTATTTTAATCAAGCTGTTAAAGCTGCCCCTGAAGACTGGTAAGCTTCTAGATTTCATGATGACATTCTTACTTTTGGATTAGAGTTATGGTTGTTTAATGGCATATTCATTGATTGCTTTTATGTTATGGTGCAGTTATGTTCTAGCATCTTACGCACGGTTCCTTTGGGATGCTGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGTTGGAGATGAAAGCTTTAGAGAAAAACCAGCAACAAGCTTCTTCCAAGGAGTTCACCCCCCACCTCCTCTTGCTGCTGCTTCTTAG

mRNA sequence

TGCTAAAACCCAAACATACGAGAAATAAATAAAACCTCGTGCACCGGTACACGGTTTTTCTTAGTTGTCACAAAACCAACGTCTCAGATTTAATCTTCAATTTCCCTCCTTCCCCACAATTTCTCTTATAAAAATCCTCCCTTTGCCGCCATTGTTTTAGGTCAGCCCTCCCTCAAGCAACTTTCACACAGCACCAGAAGCTAAGAACATCTCATTTCTGTAAACACGCAACTTCTAAATTTTCAGAATTATGCTCCTCAGAAGTGCTTCCACTCCCCTTCTCAATTCATGGTTACACCATTCAAGAGATTCATCCATAGAGGCGGAGATTGTGCACCAAATCCCCAAATCGCGTTCCATTCTCCTCTCTGGCTCTCCCACTTGCTTATCTCCCATTATCGACGATTCCCCACGGATGATTACTCGAGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCATGTCTAAGATGAAACCCTTTTGCAGAACTCTAAGTGGGTTTTCTGAGGTGGTTGAAGAGATAGATGCGGTTGGCTTTACCCGCTCCAAAACGGCGTCTTTGAGCTGTGGGTTTATTTCTGAAACTGGGGATGGGGATGGTGGGTTTGTTAGTGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCCATGGCGGTGGAGGATCTGATGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATTTATACTATCAAAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGTTTCTTGAAAGAGGTACGCGGGGATCTTGTGAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCAGGCGATGGTAATGTCTTGTCCATGTACGCTGATCTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTATTTTAATCAAGCTGTTAAAGCTGCCCCTGAAGACTGTTATGTTCTAGCATCTTACGCACGGTTCCTTTGGGATGCTGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGTTGGAGATGAAAGCTTTAGAGAAAAACCAGCAACAAGCTTCTTCCAAGGAGTTCACCCCCCACCTCCTCTTGCTGCTGCTTCTTAG

Coding sequence (CDS)

ATGCTCCTCAGAAGTGCTTCCACTCCCCTTCTCAATTCATGGTTACACCATTCAAGAGATTCATCCATAGAGGCGGAGATTGTGCACCAAATCCCCAAATCGCGTTCCATTCTCCTCTCTGGCTCTCCCACTTGCTTATCTCCCATTATCGACGATTCCCCACGGATGATTACTCGAGCGCTTTCCGAGACGGATCTTCGGGACCTGTCCATGTCTAAGATGAAACCCTTTTGCAGAACTCTAAGTGGGTTTTCTGAGGTGGTTGAAGAGATAGATGCGGTTGGCTTTACCCGCTCCAAAACGGCGTCTTTGAGCTGTGGGTTTATTTCTGAAACTGGGGATGGGGATGGTGGGTTTGTTAGTGTTCTGGTTGGTGGTGGAGTTGGTGGTAGTGGTGGAAGGATCCATGGCGGTGGAGGATCTGATGGTGGCGATGATGGGAGTTTTGGGTTTGGAGATTCGAATCATGGGAATGAGAGTACGGATTTATACTATCAAAAAATGATCGAGGCAAATCCTGGGAATTCAATGCTTTTGAGCAATTATGCTCGTTTCTTGAAAGAGGTACGCGGGGATCTTGTGAAAGCTCAAGAGTATTGTGGGAGAGCAATTTTGAGCAATCCAGGCGATGGTAATGTCTTGTCCATGTACGCTGATCTGATATGGGAAACTCAAAAGGACTCTCCAAGAGCCGAGAGTTATTTTAATCAAGCTGTTAAAGCTGCCCCTGAAGACTGTTATGTTCTAGCATCTTACGCACGGTTCCTTTGGGATGCTGAAGAAGAAGAAGAAGAAGAGGAAGAGGAAGTTGGAGATGAAAGCTTTAGAGAAAAACCAGCAACAAGCTTCTTCCAAGGAGTTCACCCCCCACCTCCTCTTGCTGCTGCTTCTTAG

Protein sequence

MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRALSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFVSVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS
Homology
BLAST of Lsi06G009780 vs. ExPASy TrEMBL
Match: A0A5A7U9I5 (Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001190 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 8.8e-141
Identity = 269/300 (89.67%), Postives = 281/300 (93.67%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           M+LRSASTPLLNSWLHHSRDSS+E EIV+QIPKSRSILLSGSP+CLSPIIDD PR ITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVYQIPKSRSILLSGSPSCLSPIIDDYPRRITRT 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDL+DLSM+KMKPF RTLSGFSE+ EE   VGF+ SKTASLSCG ISETG+ DGGFV
Sbjct: 61  LSETDLQDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           SVLVGGGVGGSGGRIHGGGGSDGGDD SFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDWSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240

Query: 241 AAPEDCYVLASYARFLWDA---EEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDCYVLASYARFLWDA   EEEEEEEEEEVG+E+FREKPATSFFQGV  PPPLAAAS
Sbjct: 241 AAPEDCYVLASYARFLWDADEEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAAAS 299

BLAST of Lsi06G009780 vs. ExPASy TrEMBL
Match: A0A1S3BA31 (uncharacterized protein LOC103487441 OS=Cucumis melo OX=3656 GN=LOC103487441 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 8.8e-141
Identity = 269/300 (89.67%), Postives = 281/300 (93.67%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           M+LRSASTPLLNSWLHHSRDSS+E EIV+QIPKSRSILLSGSP+CLSPIIDD PR ITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVYQIPKSRSILLSGSPSCLSPIIDDYPRRITRT 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDL+DLSM+KMKPF RTLSGFSE+ EE   VGF+ SKTASLSCG ISETG+ DGGFV
Sbjct: 61  LSETDLQDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           SVLVGGGVGGSGGRIHGGGGSDGGDD SFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDWSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240

Query: 241 AAPEDCYVLASYARFLWDA---EEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDCYVLASYARFLWDA   EEEEEEEEEEVG+E+FREKPATSFFQGV  PPPLAAAS
Sbjct: 241 AAPEDCYVLASYARFLWDADEEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAAAS 299

BLAST of Lsi06G009780 vs. ExPASy TrEMBL
Match: A0A6J1JJW1 (uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.4e-140
Identity = 263/297 (88.55%), Postives = 274/297 (92.26%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           MLLRSASTPLLNSWLHHSRDSS+E  IVH IPKS SI+LSGSP+CLSPIIDDSPR ITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETGIVHHIPKSSSIVLSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDLRDLS+S+ KPF RTLSGFSE+ EE DAV F  S+  SLSCG ISETGD DG FV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVRFNPSEITSLSCGSISETGDADGRFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           +VLVGGGVGGSGG IHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGCIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVK 240

Query: 241 AAPEDCYVLASYARFLWDAEEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDCYVLASYARFLWDAEEEEEEEEEE  +ES RE+PAT FFQGVHPPPP+AAAS
Sbjct: 241 AAPEDCYVLASYARFLWDAEEEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 297

BLAST of Lsi06G009780 vs. ExPASy TrEMBL
Match: A0A6J1H8I4 (uncharacterized protein LOC111461520 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461520 PE=4 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 8.2e-139
Identity = 263/298 (88.26%), Postives = 277/298 (92.95%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           MLLRSASTPLLNSWLHHSRDSS+E EIVH IPKSRSI+ SGSP+CLSPIIDDSPR ITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDLRDLS+S+ KPF RTLSGFSE+ EE DAVGF+ S+  SLSCG ISETGDGDG FV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 SVLVGGGVGGSGGRIH-GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180
           +VLVGGGVG SGG IH GGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL
Sbjct: 121 NVLVGGGVGASGGSIHGGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLL 180

Query: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAV 240
           SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAV
Sbjct: 181 SNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAV 240

Query: 241 KAAPEDCYVLASYARFLWDAEEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           KAAPEDCYVLASYARFLWDAEEEEEE+EE+  +ES RE+PAT FFQGVHPPPP+AAAS
Sbjct: 241 KAAPEDCYVLASYARFLWDAEEEEEEQEEQ-EEESLREEPATRFFQGVHPPPPIAAAS 297

BLAST of Lsi06G009780 vs. ExPASy TrEMBL
Match: A0A6J1JKH9 (uncharacterized protein LOC111485244 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485244 PE=4 SV=1)

HSP 1 Score: 501.9 bits (1291), Expect = 1.8e-138
Identity = 263/298 (88.26%), Postives = 274/298 (91.95%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           MLLRSASTPLLNSWLHHSRDSS+E  IVH IPKS SI+LSGSP+CLSPIIDDSPR ITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETGIVHHIPKSSSIVLSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDLRDLS+S+ KPF RTLSGFSE+ EE DAV F  S+  SLSCG ISETGD DG FV
Sbjct: 61  LSETDLRDLSVSRTKPFSRTLSGFSELAEETDAVRFNPSEITSLSCGSISETGDADGRFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           +VLVGGGVGGSGG IHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGCIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVK 240

Query: 241 AAPEDC-YVLASYARFLWDAEEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDC YVLASYARFLWDAEEEEEEEEEE  +ES RE+PAT FFQGVHPPPP+AAAS
Sbjct: 241 AAPEDCSYVLASYARFLWDAEEEEEEEEEEEEEESLREEPATRFFQGVHPPPPIAAAS 298

BLAST of Lsi06G009780 vs. NCBI nr
Match: XP_038878941.1 (uncharacterized protein LOC120071028 [Benincasa hispida])

HSP 1 Score: 537.0 bits (1382), Expect = 1.1e-148
Identity = 281/299 (93.98%), Postives = 287/299 (95.99%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           M+LRSASTPLLNSWLHHSRDSS+E EIVHQIPKSRSILLSGSP+CLSPIIDDSPR ITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVHQIPKSRSILLSGSPSCLSPIIDDSPRRITRT 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGD--GG 120
           LSETDLRDLSMSKMKPF RTLSGF+EVVEE DAVGF+RSKTASLSCG ISETGDGD  GG
Sbjct: 61  LSETDLRDLSMSKMKPFTRTLSGFTEVVEETDAVGFSRSKTASLSCGSISETGDGDGGGG 120

Query: 121 FVSVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSML 180
           FVSVLVGGGVGGSGGRIHGGGGSDGGDDGS GFGDSNHGNESTDLYYQKMIEANPGNSML
Sbjct: 121 FVSVLVGGGVGGSGGRIHGGGGSDGGDDGSLGFGDSNHGNESTDLYYQKMIEANPGNSML 180

Query: 181 LSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQA 240
           LSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQA
Sbjct: 181 LSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQA 240

Query: 241 VKAAPEDCYVLASYARFLWDAEEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           VKAAPEDCYVLASYARFLWDA   EEEEEEEVG+ESFREKPATSFFQGVHPPPPLAAAS
Sbjct: 241 VKAAPEDCYVLASYARFLWDA---EEEEEEEVGEESFREKPATSFFQGVHPPPPLAAAS 296

BLAST of Lsi06G009780 vs. NCBI nr
Match: XP_023515706.1 (uncharacterized protein LOC111779789 isoform X6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141
Identity = 266/297 (89.56%), Postives = 278/297 (93.60%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           MLLRSASTPLLNSWLHHSRDSS+E EIVH IPKSRSI+ SGSP+CLSPIIDDSPR ITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDLRDLS+ + KPF RTLSGFSE+ EE DAVGF+ S+  SLSCG ISETGDGDG FV
Sbjct: 61  LSETDLRDLSVPRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           +VLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVK 240

Query: 241 AAPEDCYVLASYARFLWDAEEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDCYVLASYARFLWDAEEEEEEEEEE  +ES RE+PAT FFQGVHPPPP+AAAS
Sbjct: 241 AAPEDCYVLASYARFLWDAEEEEEEEEEE--EESLREEPATRFFQGVHPPPPIAAAS 295

BLAST of Lsi06G009780 vs. NCBI nr
Match: XP_031744467.1 (uncharacterized protein LOC101218093 [Cucumis sativus] >KAE8653107.1 hypothetical protein Csa_019541 [Cucumis sativus])

HSP 1 Score: 512.3 bits (1318), Expect = 2.8e-141
Identity = 270/298 (90.60%), Postives = 281/298 (94.30%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           M+LRSASTPLLNSWLHHSRDSS+E EIVHQIPKSRSILLSGSP+CLSPIIDDSPR ITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVHQIPKSRSILLSGSPSCLSPIIDDSPRRITRT 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDL+DLSM+KMKPF RTLSGFSE+ EE   VGF+ SKTASLSCG ISETG+ DGGFV
Sbjct: 61  LSETDLKDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           SVLVGGGVGGSGGRIHGGGGSDGGDD SFGFGDSN GNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDWSFGFGDSNRGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240

Query: 241 AAPEDCYVLASYARFLWDA-EEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDCYVLASYARFLWDA EEEEEEEEEEVG+E+FREKPATSFFQGV  PPPLAAAS
Sbjct: 241 AAPEDCYVLASYARFLWDAEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAAAS 297

BLAST of Lsi06G009780 vs. NCBI nr
Match: XP_008443988.1 (PREDICTED: uncharacterized protein LOC103487441 [Cucumis melo] >KAA0050159.1 putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. makuwa] >TYK06417.1 putative Tetratricopeptide repeat-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 509.6 bits (1311), Expect = 1.8e-140
Identity = 269/300 (89.67%), Postives = 281/300 (93.67%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           M+LRSASTPLLNSWLHHSRDSS+E EIV+QIPKSRSILLSGSP+CLSPIIDD PR ITR 
Sbjct: 1   MILRSASTPLLNSWLHHSRDSSLEPEIVYQIPKSRSILLSGSPSCLSPIIDDYPRRITRT 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDL+DLSM+KMKPF RTLSGFSE+ EE   VGF+ SKTASLSCG ISETG+ DGGFV
Sbjct: 61  LSETDLQDLSMAKMKPFSRTLSGFSEMAEETHGVGFSCSKTASLSCGSISETGE-DGGFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           SVLVGGGVGGSGGRIHGGGGSDGGDD SFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDWSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAIL+NP DGNVLSMYADLIWETQKDSPRAESYFNQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILNNPEDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240

Query: 241 AAPEDCYVLASYARFLWDA---EEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDCYVLASYARFLWDA   EEEEEEEEEEVG+E+FREKPATSFFQGV  PPPLAAAS
Sbjct: 241 AAPEDCYVLASYARFLWDADEEEEEEEEEEEEVGEENFREKPATSFFQGVQSPPPLAAAS 299

BLAST of Lsi06G009780 vs. NCBI nr
Match: XP_023515705.1 (uncharacterized protein LOC111779789 isoform X5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 508.4 bits (1308), Expect = 4.0e-140
Identity = 266/298 (89.26%), Postives = 278/298 (93.29%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMITRA 60
           MLLRSASTPLLNSWLHHSRDSS+E EIVH IPKSRSI+ SGSP+CLSPIIDDSPR ITRA
Sbjct: 1   MLLRSASTPLLNSWLHHSRDSSVETEIVHHIPKSRSIVFSGSPSCLSPIIDDSPRRITRA 60

Query: 61  LSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGDGDGGFV 120
           LSETDLRDLS+ + KPF RTLSGFSE+ EE DAVGF+ S+  SLSCG ISETGDGDG FV
Sbjct: 61  LSETDLRDLSVPRTKPFSRTLSGFSELAEETDAVGFSPSEMTSLSCGSISETGDGDGRFV 120

Query: 121 SVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180
           +VLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS
Sbjct: 121 NVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLS 180

Query: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYFNQAVK 240
           NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY NQAVK
Sbjct: 181 NYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESYHNQAVK 240

Query: 241 AAPEDC-YVLASYARFLWDAEEEEEEEEEEVGDESFREKPATSFFQGVHPPPPLAAAS 298
           AAPEDC YVLASYARFLWDAEEEEEEEEEE  +ES RE+PAT FFQGVHPPPP+AAAS
Sbjct: 241 AAPEDCSYVLASYARFLWDAEEEEEEEEEE--EESLREEPATRFFQGVHPPPPIAAAS 296

BLAST of Lsi06G009780 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-66
Identity = 164/310 (52.90%), Postives = 204/310 (65.81%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWLHHS--RDSSIE-AEIVHQIPKSRSILLSGSPT--CLSPI----ID 60
           MLLRSASTPLLNS +H S  RDS IE  E VHQI + RSI LS S +  C SP+     D
Sbjct: 1   MLLRSASTPLLNSLVHVSSPRDSPIETVESVHQIQRHRSITLSASSSSCCYSPMSVHSSD 60

Query: 61  DSPRMITRALSETDLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTAS---LSCGF 120
           DS R + R  S++DLR L+ +K  P  + LSG + + +  + +GF   +T+S   +S   
Sbjct: 61  DSSRRMKRTASDSDLRHLTSTK-PPVSKFLSGGALMEDVDEGIGFGLIRTSSYDGISWAL 120

Query: 121 ISETGDGDGGFVSVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKM 180
             +T    GG   +  GGG G SGGR  GG   DGGDD             +TD++Y+KM
Sbjct: 121 DEDTEVAGGGGGGMFHGGGKGRSGGRSDGG---DGGDD-------------NTDVHYRKM 180

Query: 181 IEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDS 240
           IEANPGN + LSNYA+FLKEVR D +KA+EYCGRAIL +P DGNVL+MYA+L+W+  KDS
Sbjct: 181 IEANPGNGIFLSNYAKFLKEVRKDYLKAEEYCGRAILVSPNDGNVLAMYAELVWKIHKDS 240

Query: 241 PRAESYFNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEEVGDESFREKPA-TSFFQGV 298
            RAE+YFNQAV AAPEDCYV ASYARFLWDAEEEEEEE+EE  +E    + +  +FF G 
Sbjct: 241 SRAENYFNQAVAAAPEDCYVQASYARFLWDAEEEEEEEKEERHEEELEHQTSRMNFFTG- 290

BLAST of Lsi06G009780 vs. TAIR 10
Match: AT1G80130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.1e-47
Identity = 135/303 (44.55%), Postives = 176/303 (58.09%), Query Frame = 0

Query: 1   MLLRSASTPLLNSWL--HHSRDSSIEAEIVHQIPKSRSILLSGSPTCLSPIIDDSPRMIT 60
           MLLRS S P+LNSWL  H SR+SS E E      +S S+ L  S +    I   +   + 
Sbjct: 1   MLLRSTSAPILNSWLPQHCSRESSPEPE-SQLWRRSTSLSLFSSKS----IDGHTGEQLH 60

Query: 61  RALSET-DLRDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFI-----SET 120
           +ALS+  ++  L     +   +T +   +    +D   +T+ KT   S  F+     S +
Sbjct: 61  QALSDNKEIIILKSKSNEHSYKTPTSSRQRRSSLDETRYTK-KTLDRSSPFLVERLFSSS 120

Query: 121 GDGD----GGFVSVLV---GGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYY 180
           G GD       +  LV   GGG+GGSGG I  GGG  GG        D     ++TD YY
Sbjct: 121 GQGDKASSNDRLETLVSGGGGGMGGSGGNICNGGGGVGGSG-----VDGGRSEDATDTYY 180

Query: 181 QKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQ 240
           ++MI++NPGNS+L  NYA+FLKEV+GD+ KA+EYC RAIL N  DGNVLS+YADLI    
Sbjct: 181 REMIDSNPGNSLLTGNYAKFLKEVKGDMKKAEEYCERAILGNTNDGNVLSLYADLILHNH 240

Query: 241 KDSPRAESYFNQAVKAAPEDCYVLASYARFLWDAEEEEE-----EEEEEVGDESFREKPA 284
           +D  RA SY+ QAVK +PEDCYV ASYARFLWD +E+EE     EEEE + DE+    P 
Sbjct: 241 QDRQRAHSYYKQAVKMSPEDCYVQASYARFLWDVDEDEEDEALGEEEENLSDETGHVPPT 292

BLAST of Lsi06G009780 vs. TAIR 10
Match: AT4G32340.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 146.7 bits (369), Expect = 2.9e-35
Identity = 87/154 (56.49%), Postives = 110/154 (71.43%), Query Frame = 0

Query: 125 GGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYAR 184
           GG  GG GGR  GG G+ GG  G         G  S D YY++MI+  PG+++LLSNYAR
Sbjct: 85  GGSNGGFGGR--GGDGAGGGGGG---------GGGSVDGYYEEMIQRYPGDTLLLSNYAR 144

Query: 185 FLKEVRGDLVKAQEYCGRAILSNPG-DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAP 244
           FLKEV+GD  KA+EYC RA+LS  G DG +LSMY DLIW+   D  RA+SY++QAV+++P
Sbjct: 145 FLKEVKGDGRKAEEYCERAMLSESGRDGELLSMYGDLIWKNHGDGVRAQSYYDQAVQSSP 204

Query: 245 EDCYVLASYARFLWDAEEEEEEEEEEVGDESFRE 278
           +DC VLASYARFLWDAEEE EEEE +  ++ F +
Sbjct: 205 DDCNVLASYARFLWDAEEEVEEEESKHHEDGFSD 227

BLAST of Lsi06G009780 vs. TAIR 10
Match: AT4G17940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 7.8e-33
Identity = 98/225 (43.56%), Postives = 127/225 (56.44%), Query Frame = 0

Query: 59  RALSETDL----RDLSMSKMKPFCRTLSGFSEVVEEIDAVGFTRSKTASLSCGFISETGD 118
           R LSE+D+    R L     KP    +    E  EE   + F     + +S G   E   
Sbjct: 63  RVLSESDVIRSERMLKRVGSKPSPARIPEDDEAGEE--EIRFADGWGSMISGGLPVEEKC 122

Query: 119 GDGGFVSVLVGGGVGGSGGRIHGGGGSDGGDDGSFGFGDSNHGNESTDLYYQKMIEANPG 178
             GG     VGGG G SGG  +GGG   GG +     GD          YY++M+ +NP 
Sbjct: 123 FTGGG----VGGGSGYSGGYGNGGG---GGYEDKSKIGD----------YYREMLRSNPN 182

Query: 179 NSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPGDGNVLSMYADLIWETQKDSPRAESY 238
           NS+LL NY +FL EV  D   A+EY GRAIL NPGDG  LSMY  LIWET++D  RA+ Y
Sbjct: 183 NSLLLMNYGKFLYEVEKDAEGAEEYYGRAILENPGDGEALSMYGRLIWETKRDEKRAQGY 242

Query: 239 FNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEEVGDESFREKP 280
           F+QAV A+P DC VL SYARF+W+AE++++++EEE  +E     P
Sbjct: 243 FDQAVNASPNDCMVLGSYARFMWEAEDDDDDDEEEEEEEWMAASP 268

BLAST of Lsi06G009780 vs. TAIR 10
Match: AT1G04530.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19
Identity = 49/124 (39.52%), Postives = 79/124 (63.71%), Query Frame = 0

Query: 150 GFGDSNHGNESTDLYYQKMIEANPGNSMLLSNYARFLKEVRGDLVKAQEYCGRAILSNPG 209
           G+ D N G+     YY+ M+E  P + +LL NYA+FL E +GDL  A+EY  +  +  P 
Sbjct: 115 GYDDKNCGD-----YYKGMLEEYPLHPLLLKNYAKFL-EYKGDLSGAEEYYHKCTVVEPS 174

Query: 210 DGNVLSMYADLIWETQKDSPRAESYFNQAVKAAPEDCYVLASYARFLWDAEEEEEEEEEE 269
           DG  L+ Y  L+ +  +D  +A SYF +AV+A+P+D  VLA+YA FLW+   ++++E+++
Sbjct: 175 DGVALANYGRLVMKLHQDEAKAMSYFERAVQASPDDSIVLAAYASFLWEINADDDDEDDD 232

Query: 270 VGDE 274
             D+
Sbjct: 235 EDDD 232

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U9I58.8e-14189.67Putative Tetratricopeptide repeat-like superfamily protein OS=Cucumis melo var. ... [more]
A0A1S3BA318.8e-14189.67uncharacterized protein LOC103487441 OS=Cucumis melo OX=3656 GN=LOC103487441 PE=... [more]
A0A6J1JJW17.4e-14088.55uncharacterized protein LOC111485244 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1H8I48.2e-13988.26uncharacterized protein LOC111461520 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JKH91.8e-13888.26uncharacterized protein LOC111485244 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
XP_038878941.11.1e-14893.98uncharacterized protein LOC120071028 [Benincasa hispida][more]
XP_023515706.11.6e-14189.56uncharacterized protein LOC111779789 isoform X6 [Cucurbita pepo subsp. pepo][more]
XP_031744467.12.8e-14190.60uncharacterized protein LOC101218093 [Cucumis sativus] >KAE8653107.1 hypothetica... [more]
XP_008443988.11.8e-14089.67PREDICTED: uncharacterized protein LOC103487441 [Cucumis melo] >KAA0050159.1 put... [more]
XP_023515705.14.0e-14089.26uncharacterized protein LOC111779789 isoform X5 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G20190.11.4e-6652.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G80130.11.1e-4744.55Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G32340.12.9e-3556.49Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G17940.17.8e-3343.56Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G04530.13.8e-1939.52Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13431TPR_17coord: 165..198
e-value: 1.2E-4
score: 22.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..297
NoneNo IPR availablePANTHERPTHR26312TETRATRICOPEPTIDE REPEAT PROTEIN 5coord: 1..289
NoneNo IPR availablePANTHERPTHR26312:SF73TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEINcoord: 1..289
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 154..270
e-value: 2.4E-13
score: 51.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 164..264

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G009780.1Lsi06G009780.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding