Lsi06G009740 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G009740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DUF4050 family protein
Location	chr06: 19723462 .. 19724878 (+)
RNA-Seq Expression	Lsi06G009740
Synteny	Lsi06G009740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCAGGGGTTGTTTTGGATGCTGCACTAAACCCACGCCTATTATTGCTGTGGATGAGCCATCTAAAGGATTAAGAATTCAAGGACGAGTTGTTAAGAAACCTAGCATATCTGATGGTTTTTGGAGCACAAGCACGTGCGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATTTCGTCTATCAGTACATCAAACCTCACTCTCAGTCATAGCAATGTTGGTGGCAGTGTGAGCAACTCTTCTGAGTTTGTAAACCATGGCAAGTTTCCCTCTTACTTATCAGACCTTTGTTGAATAATTGGTGATAAAATCAGATGTCTTTTATGAAGTTGTGGATAATATTCAATTAAGGACCCATCATCTCTTCATTAGAACCCGGTCAATGTAGGGACGAGCGATCTACTCATTTTTGTTGCTTTCAGGTCTCCTTCTCTGGAATCAGACTAGGCTGCAGTGGATTGGAAGTAGTACTACTAAGGCAACGGAAGAAACTCAACAAAGACAGAAAGCAAAAATCAGGTCAGTTCACTCAATCTTTCTGCCTTTATAAACAGTTGGCACCGTTTTTAATTGCTTTAGCTTACGCGCCATAGATGTACATAAATCGAAAACTAAAAATCTCCTTGTAGCTCATATTAATCTCCATACCGTGCGTATATATATGCATTTGTTTACAGTTGGCGTGCAACATATGACAGTTTACTGGGTACAAGACAGCCTTTTCCCCATCCAATTCCTTTGTCTGTAAGTTTGCTGTCGAGGTTTTGTCATTTCTTTCTCCACTGTTCATTCTATGAATAAGAACTTCAAAATCTTTATTTCGACAGGAAATGGTGAACTTTCTTGTGGAAGTATGGGAACAGGAGGGCCTATATGATTGAAAATGCTTTTGTTTTGGATACATTCCTTGAATCTTTAGGAAGCTTCTCTGTACGGATTGCAAAAGGGAAAAAAAAAGGGTGTTTTTGTTTTTCTTCATCAATGATCCTACAATTTTCAGCTGTACAAATGTATTTAACACTATTGTCATTTTAAGACCAGAGACAGCAGAAGAAGCGACTGCCTTTAATTGTGTTAAGTCAATATATGGGCATTCTTGAAAATATGGTATCATATAGCCACCATTTTCAATGTATTCTCCTGTCTTTTTCTCCACTGTTCATTCTATGAATAAGAGCTTGAAAATATCCATCATTCACTGTTTCTGTCTGCTGCTCAATCATCAATGAAAAAATTTGATGTATCTGAGAACAACTGCAAGTTTGAGTTGTATTATGAATTTATATCTATATTTTGATGGTTTTAATTGGATTTTTTGCATGGAATTTTTAAAGATATTATTCATGGTATGGTTTTTCATTGGATTGATCTTTTGGAAGAAATGATATTAGAAGGTGGCCCAAGTGAAAGATTG

mRNA sequence

TGCAGGGGTTGTTTTGGATGCTGCACTAAACCCACGCCTATTATTGCTGTGGATGAGCCATCTAAAGGATTAAGAATTCAAGGACGAGTTGTTAAGAAACCTAGCATATCTGATGGTTTTTGGAGCACAAGCACGTGCGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATTTCGTCTATCAGTACATCAAACCTCACTCTCAGTCATAGCAATGTTGGTGGCAGACCCATCATCTCTTCATTAGAACCCGGTCAATGTAGGGACGAGCGATCTACTCATTTTTGTTGCTTTCAGGTCTCCTTCTCTGGAATCAGACTAGGCTGCAGTGGATTGGAAGTAGTACTACTAAGGCAACGGAAGAAACTCAACAAAGACAGAAAGCAAAAATCAGGTCAGTTCACTCAATCTTTCTGCCTTTATAAACAGTTGGCACCTTGGCGTGCAACATATGACAGTTTACTGGGTACAAGACAGCCTTTTCCCCATCCAATTCCTTTGTCTGAAATGGTGAACTTTCTTGTGGAAGTATGGGAACAGGAGGGCCTATATGATTGAAAATGCTTTTGTTTTGGATACATTCCTTGAATCTTTAGGAAGCTTCTCTGTACGGATTGCAAAAGGGAAAAAAAAAGGGTGTTTTTGTTTTTCTTCATCAATGATCCTACAATTTTCAGCTGTACAAATGTATTTAACACTATTGTCATTTTAAGACCAGAGACAGCAGAAGAAGCGACTGCCTTTAATTGTGTTAAGTCAATATATGGGCATTCTTGAAAATATGGTATCATATAGCCACCATTTTCAATGTATTCTCCTGTCTTTTTCTCCACTGTTCATTCTATGAATAAGAGCTTGAAAATATCCATCATTCACTGTTTCTGTCTGCTGCTCAATCATCAATGAAAAAATTTGATGTATCTGAGAACAACTGCAAGTTTGAGTTGTATTATGAATTTATATCTATATTTTGATGGTTTTAATTGGATTTTTTGCATGGAATTTTTAAAGATATTATTCATGGTATGGTTTTTCATTGGATTGATCTTTTGGAAGAAATGATATTAGAAGGTGGCCCAAGTGAAAGATTG

Coding sequence (CDS)

TGCAGGGGTTGTTTTGGATGCTGCACTAAACCCACGCCTATTATTGCTGTGGATGAGCCATCTAAAGGATTAAGAATTCAAGGACGAGTTGTTAAGAAACCTAGCATATCTGATGGTTTTTGGAGCACAAGCACGTGCGATTTGGATAATAGCACCATTCAGTCTCAACGAAGCATTTCGTCTATCAGTACATCAAACCTCACTCTCAGTCATAGCAATGTTGGTGGCAGACCCATCATCTCTTCATTAGAACCCGGTCAATGTAGGGACGAGCGATCTACTCATTTTTGTTGCTTTCAGGTCTCCTTCTCTGGAATCAGACTAGGCTGCAGTGGATTGGAAGTAGTACTACTAAGGCAACGGAAGAAACTCAACAAAGACAGAAAGCAAAAATCAGGTCAGTTCACTCAATCTTTCTGCCTTTATAAACAGTTGGCACCTTGGCGTGCAACATATGACAGTTTACTGGGTACAAGACAGCCTTTTCCCCATCCAATTCCTTTGTCTGAAATGGTGAACTTTCTTGTGGAAGTATGGGAACAGGAGGGCCTATATGATTGA

Protein sequence

CRGCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRKKLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD

Homology

[Close]

BLAST of Lsi06G009740 vs. ExPASy TrEMBL
Match: A0A5A7U2N6 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G002060 PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 4.3e-53
Identity = 120/184 (65.22%), Postives = 131/184 (71.20%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           STSNLTLS+SNV G    SS      +    ++ C    + + ++   SG          
Sbjct: 81  STSNLTLSNSNVAGSVSSSSEFVNHGKFPLLSNPCLLLWNQTRMQWIGSG--------TT 140

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
           KL  + +Q+           K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE
Sbjct: 141 KLTDETQQRQ----------KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 186

Query: 183 GLYD 187
           GLYD
Sbjct: 201 GLYD 186

[Close]

BLAST of Lsi06G009740 vs. ExPASy TrEMBL
Match: A0A6J1CTQ5 (uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014486 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 6.2e-52
Identity = 118/184 (64.13%), Postives = 127/184 (69.02%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 98  GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 157

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           STSNLTL+ SNVGG    S+  P +  +                        ++L  Q +
Sbjct: 158 STSNLTLNPSNVGG----STSNPSEFVNH----------------------GLLLWNQNR 217

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
                   K+   TQ     K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE
Sbjct: 218 LQWTGSSSKTTDQTQQ--RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 253

Query: 183 GLYD 187
           GLYD
Sbjct: 278 GLYD 253

[Close]

BLAST of Lsi06G009740 vs. ExPASy TrEMBL
Match: A0A5D3C7W3 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001290 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.1e-51
Identity = 121/186 (65.05%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCF--QVSFSGIRLGCSGLEVVLLRQ 122
           ST NLTLS+SNV G    SS        E   H      Q     I  G +         
Sbjct: 81  STLNLTLSNSNVAGSVSSSS--------EFINHGLLLWNQTRMQWIGSGTT--------- 140

Query: 123 RKKLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 182
             KL  + +Q+           K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE
Sbjct: 141 --KLTDETQQRQ----------KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 177

Query: 183 QEGLYD 187
           QEGLYD
Sbjct: 201 QEGLYD 177

[Close]

BLAST of Lsi06G009740 vs. ExPASy TrEMBL
Match: A0A1S3B9E5 (uncharacterized protein LOC103487445 OS=Cucumis melo OX=3656 GN=LOC103487445 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.1e-51
Identity = 121/186 (65.05%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCF--QVSFSGIRLGCSGLEVVLLRQ 122
           ST NLTLS+SNV G    SS        E   H      Q     I  G +         
Sbjct: 81  STLNLTLSNSNVAGSVSSSS--------EFINHGLLLWNQTRMQWIGSGTT--------- 140

Query: 123 RKKLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 182
             KL  + +Q+           K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE
Sbjct: 141 --KLTDETQQRQ----------KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 177

Query: 183 QEGLYD 187
           QEGLYD
Sbjct: 201 QEGLYD 177

[Close]

BLAST of Lsi06G009740 vs. ExPASy TrEMBL
Match: A0A6J1H9M2 (uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC111461800 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 3.4e-50
Identity = 116/184 (63.04%), Postives = 124/184 (67.39%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           STSNLT S SNVGG    S   P +  +                         +LL  + 
Sbjct: 81  STSNLTHSQSNVGG----SVSNPSEYVNHG-----------------------LLLWNQT 140

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
           +L       +    ++    K    WRATYDSLLGTRQPFPH IPLSEMVNFLVEVWEQE
Sbjct: 141 RLQWIGSSNTNTTDETPERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQE 177

Query: 183 GLYD 187
           GLYD
Sbjct: 201 GLYD 177

[Close]

BLAST of Lsi06G009740 vs. NCBI nr
Match: KAA0050173.1 (DUF4050 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 217.6 bits (553), Expect = 8.9e-53
Identity = 120/184 (65.22%), Postives = 131/184 (71.20%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           STSNLTLS+SNV G    SS      +    ++ C    + + ++   SG          
Sbjct: 81  STSNLTLSNSNVAGSVSSSSEFVNHGKFPLLSNPCLLLWNQTRMQWIGSG--------TT 140

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
           KL  + +Q+           K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE
Sbjct: 141 KLTDETQQRQ----------KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 186

Query: 183 GLYD 187
           GLYD
Sbjct: 201 GLYD 186

[Close]

BLAST of Lsi06G009740 vs. NCBI nr
Match: XP_038879580.1 (uncharacterized protein LOC120071390 [Benincasa hispida])

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 122/184 (66.30%), Postives = 128/184 (69.57%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           STSNLTLSHSNVGG    SS        E   H     + ++  RL   G          
Sbjct: 81  STSNLTLSHSNVGGSVSSSS--------EFVNHGL---LLWNQTRLQWIGSSTT------ 140

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
           K   + +Q+           K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE E
Sbjct: 141 KTTDETQQRQ----------KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEHE 177

Query: 183 GLYD 187
           GLYD
Sbjct: 201 GLYD 177

[Close]

BLAST of Lsi06G009740 vs. NCBI nr
Match: XP_004150590.1 (uncharacterized protein LOC101203426 isoform X2 [Cucumis sativus] >KAE8653102.1 hypothetical protein Csa_019993 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 2.6e-52
Identity = 122/186 (65.59%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCF--QVSFSGIRLGCSGLEVVLLRQ 122
           STSNLTLSHSNV G    SS        E   H      Q     I  G +         
Sbjct: 81  STSNLTLSHSNVAGSVSSSS--------EFVNHGLLLWNQTRMQWIGSGTT--------- 140

Query: 123 RKKLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 182
             K   + +Q+           K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE
Sbjct: 141 --KTTDETEQRQ----------KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 177

Query: 183 QEGLYD 187
           QEGLYD
Sbjct: 201 QEGLYD 177

[Close]

BLAST of Lsi06G009740 vs. NCBI nr
Match: XP_022144929.1 (uncharacterized protein LOC111014486 [Momordica charantia])

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 118/184 (64.13%), Postives = 127/184 (69.02%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 98  GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 157

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           STSNLTL+ SNVGG    S+  P +  +                        ++L  Q +
Sbjct: 158 STSNLTLNPSNVGG----STSNPSEFVNH----------------------GLLLWNQNR 217

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
                   K+   TQ     K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE
Sbjct: 218 LQWTGSSSKTTDQTQQ--RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 253

Query: 183 GLYD 187
           GLYD
Sbjct: 278 GLYD 253

[Close]

BLAST of Lsi06G009740 vs. NCBI nr
Match: XP_008443992.1 (PREDICTED: uncharacterized protein LOC103487445 [Cucumis melo] >TYK06426.1 DUF4050 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.0 bits (541), Expect = 2.2e-51
Identity = 121/186 (65.05%), Postives = 126/186 (67.74%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCF--QVSFSGIRLGCSGLEVVLLRQ 122
           ST NLTLS+SNV G    SS        E   H      Q     I  G +         
Sbjct: 81  STLNLTLSNSNVAGSVSSSS--------EFINHGLLLWNQTRMQWIGSGTT--------- 140

Query: 123 RKKLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 182
             KL  + +Q+           K    WRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE
Sbjct: 141 --KLTDETQQRQ----------KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE 177

Query: 183 QEGLYD 187
           QEGLYD
Sbjct: 201 QEGLYD 177

[Close]

BLAST of Lsi06G009740 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 4.3e-37
Identity = 86/184 (46.74%), Postives = 109/184 (59.24%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTSTC++DNST+QSQRS+SSI
Sbjct: 20  GCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           S +N T + ++                    T F               GL +    +++
Sbjct: 80  SFTNNTSTSAST----------------SNPTEFV------------NHGLNLWNQTRQQ 139

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
            L     QK  +      + +    W ATY+SLLG  + F  PIPL EMV+FLV+VWEQE
Sbjct: 140 WLANGTSQKKAK------VREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQE 169

Query: 183 GLYD 187
           GLYD
Sbjct: 200 GLYD 169

[Close]

BLAST of Lsi06G009740 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 152.1 bits (383), Expect = 4.3e-37
Identity = 86/184 (46.74%), Postives = 109/184 (59.24%), Query Frame = 0


Query: 3   GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 62
           GCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTSTC++DNST+QSQRS+SSI
Sbjct: 20  GCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query: 63  STSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQRK 122
           S +N T + ++                    T F               GL +    +++
Sbjct: 80  SFTNNTSTSAST----------------SNPTEFV------------NHGLNLWNQTRQQ 139

Query: 123 KLNKDRKQKSGQFTQSFCLYKQLAPWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQE 182
            L     QK  +      + +    W ATY+SLLG  + F  PIPL EMV+FLV+VWEQE
Sbjct: 140 WLANGTSQKKAK------VREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQE 169

Query: 183 GLYD 187
           GLYD
Sbjct: 200 GLYD 169

[Close]

BLAST of Lsi06G009740 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.0 bits (297), Expect = 4.0e-27
Identity = 79/186 (42.47%), Postives = 95/186 (51.08%), Query Frame = 0


Query: 4   CFGCCTKPTP-IIAVDEPSKGLRIQGRVVKKPSI-SDGFWSTSTCDLD-NSTIQSQRSIS 63
           CFGCC +    ++ VDEPSKGL+IQG++VKK S  SD FWSTSTCD+D N TIQSQ S  
Sbjct: 17  CFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQSSNP 76

Query: 64  SISTSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQ 123
                                     QC    ST F        G+ L            
Sbjct: 77  PFDP----------------------QCSTSNSTEFV-----NHGLIL------------ 136

Query: 124 RKKLNKDRKQKSGQFTQSFCLYKQLA-PWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVW 183
               N  R+Q     T+  CL  + A  W +TYDSLL T + FP PIPL EMV+FLV+VW
Sbjct: 137 ---WNHTRQQWRECLTRQQCLVPEPAISWNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVW 160

Query: 184 EQEGLY 186
           E+EGLY
Sbjct: 197 EEEGLY 160

[Close]

BLAST of Lsi06G009740 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19
Identity = 69/187 (36.90%), Postives = 88/187 (47.06%), Query Frame = 0


Query: 3   GCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSIS 62
           GC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S+S
Sbjct: 3   GCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLS 62

Query: 63  SISTSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQ 122
           S   SN T    +       S+  P                          GL +    +
Sbjct: 63  S---SNQTFDSQSAARN---SNAPPEYVN---------------------QGLLLWNQTR 122

Query: 123 RKKLNKDRKQKSGQFTQSFCLYKQLAPWR-ATYDSLLGTRQPFPHPIPLSEMVNFLVEVW 182
            + + KD+        Q   L      W  ATYDSLLG+ + FP PIPL+EMV+FLV++W
Sbjct: 123 ERWVGKDKPNNPVDHNQGAKL-----NWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIW 154

Query: 183 EQEGLYD 187
           EQEGLYD
Sbjct: 183 EQEGLYD 154

[Close]

BLAST of Lsi06G009740 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 2.4e-19
Identity = 69/187 (36.90%), Postives = 88/187 (47.06%), Query Frame = 0


Query: 3   GCFGCCT--KPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSIS 62
           GC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S+S
Sbjct: 3   GCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLS 62

Query: 63  SISTSNLTLSHSNVGGRPIISSLEPGQCRDERSTHFCCFQVSFSGIRLGCSGLEVVLLRQ 122
           S   SN T    +       S+  P                          GL +    +
Sbjct: 63  S---SNQTFDSQSAARN---SNAPPEYVN---------------------QGLLLWNQTR 122

Query: 123 RKKLNKDRKQKSGQFTQSFCLYKQLAPWR-ATYDSLLGTRQPFPHPIPLSEMVNFLVEVW 182
            + + KD+        Q   L      W  ATYDSLLG+ + FP PIPL+EMV+FLV++W
Sbjct: 123 ERWVGKDKPNNPVDHNQGAKL-----NWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIW 154

Query: 183 EQEGLYD 187
           EQEGLYD
Sbjct: 183 EQEGLYD 154

The following BLAST results are available for this feature:

BLAST of Lsi06G009740 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi06G009740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2N6	4.3e-53	65.22	DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A6J1CTQ5	6.2e-52	64.13	uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5D3C7W3	1.1e-51	65.05	DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A1S3B9E5	1.1e-51	65.05	uncharacterized protein LOC103487445 OS=Cucumis melo OX=3656 GN=LOC103487445 PE=...	[more]
A0A6J1H9M2	3.4e-50	63.04	uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]

BLAST of Lsi06G009740 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050173.1	8.9e-53	65.22	DUF4050 family protein [Cucumis melo var. makuwa]	[more]
XP_038879580.1	1.2e-52	66.30	uncharacterized protein LOC120071390 [Benincasa hispida]	[more]
XP_004150590.1	2.6e-52	65.59	uncharacterized protein LOC101203426 isoform X2 [Cucumis sativus] >KAE8653102.1 ...	[more]
XP_022144929.1	1.3e-51	64.13	uncharacterized protein LOC111014486 [Momordica charantia]	[more]
XP_008443992.1	2.2e-51	65.05	PREDICTED: uncharacterized protein LOC103487445 [Cucumis melo] >TYK06426.1 DUF40...	[more]

BLAST of Lsi06G009740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	4.3e-37	46.74	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	4.3e-37	46.74	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G32342.1	4.0e-27	42.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15350.2	2.4e-19	36.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.1	2.4e-19	36.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 147..186 e-value: 3.2E-12 score: 47.2
None	No IPR available	PANTHER	PTHR33373:SF13	DUF4050 FAMILY PROTEIN	coord: 2..75 coord: 131..186
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 2..75 coord: 131..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G009740.1	Lsi06G009740.1	mRNA