Lsi06G009690 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G009690
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	ethylene-responsive transcription factor WIN1-like
Location	chr06: 19664746 .. 19665782 (-)
RNA-Seq Expression	Lsi06G009690
Synteny	Lsi06G009690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTACTATCCTCTCTCTCTTTAAAAATCTTCCCTTTTTATTCTAATAATTTCTTCCCCTTTCTTTGTGTACTTTAGTTTTTTTTTTTTCTCTCCTTCTTGTTCTTTCTCTGACAATATGCCCAAGTTTAAGAAATTTAGAGGTGTTAGGCAACGTCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCTTTATTGTAATTAGTTACATTCTCCCAACTTTTTTTTTTGGGCTCTGTGATTATGTTTTCATCGTTGAATTTTGTATTTTAATGAAACTTTAATCGTGTTTTTGTATTCTGATGATTATTTGATGAAATGCATGCATGCAGGAAGAGGAGGATTTGGCTCGGGACGTTTGAGACGGCGGAGGAAGCAGCGAAAGCGTACGATCAAGCTGCAGTTTTGATGAGCGGTCGGAACGCGAAAACCAATTTCCCTACTACTCCCAATGGAGACATCAACAACATTGTTACAACCAAGGATTCACCAAAGGGTTTGTCTGAAATATTACAAGCCAAGCTCAAGAAATGCTGTCGTACTCCGTCACCGTCGATGACATGCTTGAGGCTCGACACCGAGAATTCGAACCTCGGCGTGTGGCAGAAGCGTGCGGGGCAACGATCGGCATCCAACTGGGTTATGACCGTTGAGCTTGGAAACAAGAAGAGCCACAATAACACCAATAACGACAACGACAACGATAATGTAGATTCTCCTATGATGGCTGTGGTTGCTTCCGATCATCAGTCTCCGGTGGCGGAAGTGGCGGAGATTCCATCGGAGTTAGAAGAAGAAGAGAGAATGTTAGCATTGCAAATGGTGGAGGAACTGCTTCACATCAACTATGATCCTGCTGAGCCATTTGAGATTCAACAAGGAAAGGATATTAATTATCTTTAGTTCGATGGTAACCAAAATGCCTATATATAATATTAACTTCTGTTGTTAATTAAAGTTGTAATCTTTGGGAACATGCAATAATATTGTACTATGAAAAAACAAATGAAAATATATACATATAATATAACATAATTAT

mRNA sequence

GTACTATCCTCTCTCTCTTTAAAAATCTTCCCTTTTTATTCTAATAATTTCTTCCCCTTTCTTTGTGTACTTTAGTTTTTTTTTTTTCTCTCCTTCTTGTTCTTTCTCTGACAATATGCCCAAGTTTAAGAAATTTAGAGGTGTTAGGCAACGTCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCTTTATTGAAGAGGAGGATTTGGCTCGGGACGTTTGAGACGGCGGAGGAAGCAGCGAAAGCGTACGATCAAGCTGCAGTTTTGATGAGCGGTCGGAACGCGAAAACCAATTTCCCTACTACTCCCAATGGAGACATCAACAACATTGTTACAACCAAGGATTCACCAAAGGGTTTGTCTGAAATATTACAAGCCAAGCTCAAGAAATGCTGTCGTACTCCGTCACCGTCGATGACATGCTTGAGGCTCGACACCGAGAATTCGAACCTCGGCGTGTGGCAGAAGCGTGCGGGGCAACGATCGGCATCCAACTGGGTTATGACCGTTGAGCTTGGAAACAAGAAGAGCCACAATAACACCAATAACGACAACGACAACGATAATGTAGATTCTCCTATGATGGCTGTGGTTGCTTCCGATCATCAGTCTCCGGTGGCGGAAGTGGCGGAGATTCCATCGGAGTTAGAAGAAGAAGAGAGAATGTTAGCATTGCAAATGGTGGAGGAACTGCTTCACATCAACTATGATCCTGCTGAGCCATTTGAGATTCAACAAGGAAAGGATATTAATTATCTTTAGTTCGATGGTAACCAAAATGCCTATATATAATATTAACTTCTGTTGTTAATTAAAGTTGTAATCTTTGGGAACATGCAATAATATTGTACTATGAAAAAACAAATGAAAATATATACATATAATATAACATAATTAT

Coding sequence (CDS)

ATGCCCAAGTTTAAGAAATTTAGAGGTGTTAGGCAACGTCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCTTTATTGAAGAGGAGGATTTGGCTCGGGACGTTTGAGACGGCGGAGGAAGCAGCGAAAGCGTACGATCAAGCTGCAGTTTTGATGAGCGGTCGGAACGCGAAAACCAATTTCCCTACTACTCCCAATGGAGACATCAACAACATTGTTACAACCAAGGATTCACCAAAGGGTTTGTCTGAAATATTACAAGCCAAGCTCAAGAAATGCTGTCGTACTCCGTCACCGTCGATGACATGCTTGAGGCTCGACACCGAGAATTCGAACCTCGGCGTGTGGCAGAAGCGTGCGGGGCAACGATCGGCATCCAACTGGGTTATGACCGTTGAGCTTGGAAACAAGAAGAGCCACAATAACACCAATAACGACAACGACAACGATAATGTAGATTCTCCTATGATGGCTGTGGTTGCTTCCGATCATCAGTCTCCGGTGGCGGAAGTGGCGGAGATTCCATCGGAGTTAGAAGAAGAAGAGAGAATGTTAGCATTGCAAATGGTGGAGGAACTGCTTCACATCAACTATGATCCTGCTGAGCCATTTGAGATTCAACAAGGAAAGGATATTAATTATCTTTAG

Protein sequence

MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPTTPNGDINNIVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVWQKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIPSELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL

Homology

[Close]

BLAST of Lsi06G009690 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.0e-55
Identity = 117/209 (55.98%), Postives = 144/209 (68.90%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWV+EIRHPLLKRRIWLGTFETAEEAA+AYD+AAVLMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPTTPNG-----------DINNIVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDT 120
           NFP   N              ++ +++  S   LS IL AKL+KCC++PSPS+TCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ENSNLGVWQKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPV 180
            +S++GVWQKRAG +S S+WVMTVELG   S   T +    D + +P   V         
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEV--------- 180

Query: 181 AEVAEIPSELEEEERMLALQMVEELLHIN 199
            E+     E+ +EE  +ALQM+EELL+ N
Sbjct: 181 -EIGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Lsi06G009690 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.2e-47
Identity = 99/196 (50.51%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
           +KFRGVRQR WGSWVSEIRHPLLKRR+WLGTFETAE AA+AYDQAA+LM+G+NAKTNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 65  TPNGD----INNIVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVWQKR 124
             + +    + ++ +   SPK LSE+L AKL+K C+  +PS+TCLRLDT++S++GVWQKR
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 125 AGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIPSELE 184
           AG +++  WVM +ELGN  + +  +            + +   + Q+   E  E  + + 
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVD------------LGLTTMNKQNVEKEEEEEEAIIS 184

Query: 185 EEERMLALQMVEELLH 197
           +E++ LA++M+EELL+
Sbjct: 185 DEDQ-LAMEMIEELLN 187

[Close]

BLAST of Lsi06G009690 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-46
Identity = 102/194 (52.58%), Postives = 133/194 (68.56%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
           KKFRGVRQR WGSWVSEIRHPLLKRR+WLGTF+TAE AA+AYDQAAVLM+G++AKTNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 65  TPNGDINN--IVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVWQKRAG 124
             +   N+  I +   SPK LSE+L AKL+K C+  +P +TCLRLD ++S++GVWQKRAG
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 125 QRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIPSELEEE 184
            +++ NWV  VELG+K       N     ++++  M V   D Q               E
Sbjct: 125 SKTSPNWVKLVELGDKV------NARPGGDIETNKMKVRNEDVQ---------------E 177

Query: 185 ERMLALQMVEELLH 197
           +  +A+QM+EELL+
Sbjct: 185 DDQMAMQMIEELLN 177

[Close]

BLAST of Lsi06G009690 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-25
Identity = 60/90 (66.67%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 5  KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
          ++FRGVRQRHWGSWVSEIRHPLLK RIWLGTFETAE+AA+AYD+AA LM G  A+TNFP 
Sbjct: 6  QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 65 TPNGDINNIVTTKDSPKGLSEILQAKLKKC 95
           PN           S K LS  L AKL KC
Sbjct: 66 NPN------AIPTSSSKLLSATLTAKLHKC 89

[Close]

BLAST of Lsi06G009690 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-22
Identity = 53/90 (58.89%), Postives = 64/90 (71.11%), Query Frame = 0


Query: 5  KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
          +++RG RQRHWGSWVSEIRH +LK RIW GTFE+AE+AA+AYD+AA LM G  A+TNFP 
Sbjct: 6  QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPY 65

Query: 65 TPNGDINNIVTTKDSPKGLSEILQAKLKKC 95
           PN       +   S K LS  L AKL +C
Sbjct: 66 NPN------ASQSSSSKLLSATLIAKLHRC 89

[Close]

BLAST of Lsi06G009690 vs. ExPASy TrEMBL
Match: A0A1S3BA41 (ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LOC103487449 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.7e-98
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AAKAYDQAAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPT-TPNGD-INNI-VTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVW 120
           NFPT + NG+ INNI  TTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GVW
Sbjct: 61  NFPTSSSNGETINNIDTTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 QKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASD-HQSPVAEVAEIP 180
           QKRAGQ+S SNWVMTVELGNKK  +N N + +++N DS MMAVVASD HQSPV EVAEIP
Sbjct: 121 QKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEVAEIP 180

Query: 181 SELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           SEL+EEE+MLALQMVEELLHIN+DPAEPFEIQQGKDINYL
Sbjct: 181 SELDEEEKMLALQMVEELLHINFDPAEPFEIQQGKDINYL 220

[Close]

BLAST of Lsi06G009690 vs. ExPASy TrEMBL
Match: A0A5D3C530 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001380 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 1.9e-97
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AAKAYDQAAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPT-TPNGD-INNI-VTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVW 120
           NFPT + NG+ INNI  TTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GVW
Sbjct: 61  NFPTSSSNGETINNIDTTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 QKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASD-HQSPVAEVAEIP 180
           QKRAGQ+S SNWVMTVELGNKK  +N N + +++N DS MMAVVASD HQSPV EVAEIP
Sbjct: 121 QKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEVAEIP 180

Query: 181 SELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           SEL+EEE+ML LQMVEELLHIN+DPAEPFEIQQGKDINYL
Sbjct: 181 SELDEEEKMLTLQMVEELLHINFDPAEPFEIQQGKDINYL 220

[Close]

BLAST of Lsi06G009690 vs. ExPASy TrEMBL
Match: A0A5A7TUK2 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001140 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.3e-97
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AAKAYDQAAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPT-TPNGD-INNI-VTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVW 120
           NFPT + NG+ INNI  TTKDSPK LSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GVW
Sbjct: 61  NFPTSSSNGETINNIDTTTKDSPKDLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 QKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASD-HQSPVAEVAEIP 180
           QKRAGQ+S SNWVMTVELGNKK  +N N + +++N DS MMAVVASD HQSPV EVAEIP
Sbjct: 121 QKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEVAEIP 180

Query: 181 SELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           SEL+EEE+MLALQMVEELLHIN+DPAEPFEIQQGKDINYL
Sbjct: 181 SELDEEEKMLALQMVEELLHINFDPAEPFEIQQGKDINYL 220

[Close]

BLAST of Lsi06G009690 vs. ExPASy TrEMBL
Match: A0A0A0LZE1 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G340430 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-94
Identity = 188/223 (84.30%), Postives = 201/223 (90.13%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVL+SGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLISGRNAKT 60

Query: 61  NFPT--TPNGD-INNIVTT-KDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGV 120
           NFPT  + NG+ INNIVTT KDSPKGLSEILQAKLKKCCRTPS SMTCLRLDTENSN+GV
Sbjct: 61  NFPTSSSSNGETINNIVTTAKDSPKGLSEILQAKLKKCCRTPSRSMTCLRLDTENSNIGV 120

Query: 121 WQKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSP---VAEVA 180
           WQKRAGQ+S SNWVMTVELGNKK  +N N   +++N DS MMA VASDHQSP   V EVA
Sbjct: 121 WQKRAGQQSTSNWVMTVELGNKKRVSNENESENDNNADSHMMADVASDHQSPVVEVVEVA 180

Query: 181 EIPSELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           EIPSEL+EEE+MLALQMVEEL +IN+DPAEPFEIQQGKDINYL
Sbjct: 181 EIPSELDEEEKMLALQMVEELPYINFDPAEPFEIQQGKDINYL 223

[Close]

BLAST of Lsi06G009690 vs. ExPASy TrEMBL
Match: A0A6J1F021 (ethylene-responsive transcription factor WIN1-like OS=Cucurbita moschata OX=3662 GN=LOC111440941 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.6e-88
Identity = 174/214 (81.31%), Postives = 185/214 (86.45%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAA+AYDQAA+LMSGRNAKT
Sbjct: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFPTTPNGDINNIVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVWQKR 120
           NFPTT +    NI TTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GVWQKR
Sbjct: 61  NFPTTHD---TNITTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVWQKR 120

Query: 121 AGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIPSELE 180
           AG RSAS+WVMTVELGNKKSHNN          D  +M VV +D     AEVAEIPSEL+
Sbjct: 121 AGPRSASSWVMTVELGNKKSHNNE---------DDSLMGVVVADQSPVAAEVAEIPSELD 180

Query: 181 EEERMLALQMVEELLHINYD-PAEPFEIQQGKDI 214
           EEERM+ALQMVEELLHI+YD P E FEIQQGKD+
Sbjct: 181 EEERMVALQMVEELLHISYDEPNELFEIQQGKDV 202

[Close]

BLAST of Lsi06G009690 vs. NCBI nr
Match: XP_038879891.1 (ethylene-responsive transcription factor WIN1-like [Benincasa hispida])

HSP 1 Score: 385.6 bits (989), Expect = 2.9e-103
Identity = 197/220 (89.55%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLM GRNAKT
Sbjct: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMCGRNAKT 60

Query: 61  NFPTTP-NGD---INNIVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGV 120
           NFPTTP NGD    N I TTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GV
Sbjct: 61  NFPTTPLNGDHTNNNTITTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGV 120

Query: 121 WQKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIP 180
           WQKRAGQRSASNWVMTVELGNKK  +N NN+ DN NVDSPM AVVASDHQS VAE AEIP
Sbjct: 121 WQKRAGQRSASNWVMTVELGNKKRLDNNNNNGDNGNVDSPMAAVVASDHQSTVAEAAEIP 180

Query: 181 SELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           SEL+EEE+MLALQMVEELLHIN+DPAEPF+IQQGKDINYL
Sbjct: 181 SELDEEEKMLALQMVEELLHINFDPAEPFQIQQGKDINYL 220

[Close]

BLAST of Lsi06G009690 vs. NCBI nr
Match: XP_008443999.1 (PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo])

HSP 1 Score: 366.7 bits (940), Expect = 1.4e-97
Identity = 191/220 (86.82%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AAKAYDQAAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPT-TPNGD-INNI-VTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVW 120
           NFPT + NG+ INNI  TTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GVW
Sbjct: 61  NFPTSSSNGETINNIDTTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 QKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASD-HQSPVAEVAEIP 180
           QKRAGQ+S SNWVMTVELGNKK  +N N + +++N DS MMAVVASD HQSPV EVAEIP
Sbjct: 121 QKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEVAEIP 180

Query: 181 SELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           SEL+EEE+MLALQMVEELLHIN+DPAEPFEIQQGKDINYL
Sbjct: 181 SELDEEEKMLALQMVEELLHINFDPAEPFEIQQGKDINYL 220

[Close]

BLAST of Lsi06G009690 vs. NCBI nr
Match: TYK06434.1 (ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 365.2 bits (936), Expect = 4.0e-97
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AAKAYDQAAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPT-TPNGD-INNI-VTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVW 120
           NFPT + NG+ INNI  TTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GVW
Sbjct: 61  NFPTSSSNGETINNIDTTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 QKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASD-HQSPVAEVAEIP 180
           QKRAGQ+S SNWVMTVELGNKK  +N N + +++N DS MMAVVASD HQSPV EVAEIP
Sbjct: 121 QKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEVAEIP 180

Query: 181 SELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           SEL+EEE+ML LQMVEELLHIN+DPAEPFEIQQGKDINYL
Sbjct: 181 SELDEEEKMLTLQMVEELLHINFDPAEPFEIQQGKDINYL 220

[Close]

BLAST of Lsi06G009690 vs. NCBI nr
Match: KAA0046820.1 (ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 364.0 bits (933), Expect = 8.9e-97
Identity = 190/220 (86.36%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           MPK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AAKAYDQAAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPT-TPNGD-INNI-VTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVW 120
           NFPT + NG+ INNI  TTKDSPK LSEILQAKLKKCCRTPSPSMTCLRLDTENSN+GVW
Sbjct: 61  NFPTSSSNGETINNIDTTTKDSPKDLSEILQAKLKKCCRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 QKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASD-HQSPVAEVAEIP 180
           QKRAGQ+S SNWVMTVELGNKK  +N N + +++N DS MMAVVASD HQSPV EVAEIP
Sbjct: 121 QKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEVAEIP 180

Query: 181 SELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           SEL+EEE+MLALQMVEELLHIN+DPAEPFEIQQGKDINYL
Sbjct: 181 SELDEEEKMLALQMVEELLHINFDPAEPFEIQQGKDINYL 220

[Close]

BLAST of Lsi06G009690 vs. NCBI nr
Match: XP_004151061.2 (ethylene-responsive transcription factor WIN1 [Cucumis sativus])

HSP 1 Score: 355.9 bits (912), Expect = 2.4e-94
Identity = 188/223 (84.30%), Postives = 202/223 (90.58%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           +PK KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVL+SGRNAKT
Sbjct: 35  IPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLISGRNAKT 94

Query: 61  NFPT--TPNGD-INNIVTT-KDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGV 120
           NFPT  + NG+ INNIVTT KDSPKGLSEILQAKLKKCCRTPS SMTCLRLDTENSN+GV
Sbjct: 95  NFPTSSSSNGETINNIVTTAKDSPKGLSEILQAKLKKCCRTPSRSMTCLRLDTENSNIGV 154

Query: 121 WQKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSP---VAEVA 180
           WQKRAGQ+S SNWVMTVELGNKK  +N N   +++N DS MMA VASDHQSP   V EVA
Sbjct: 155 WQKRAGQQSTSNWVMTVELGNKKRVSNENESENDNNADSHMMADVASDHQSPVVEVVEVA 214

Query: 181 EIPSELEEEERMLALQMVEELLHINYDPAEPFEIQQGKDINYL 217
           EIPSEL+EEE+MLALQMVEELL+IN+DPAEPFEIQQGKDINYL
Sbjct: 215 EIPSELDEEEKMLALQMVEELLYINFDPAEPFEIQQGKDINYL 257

[Close]

BLAST of Lsi06G009690 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-56
Identity = 117/209 (55.98%), Postives = 144/209 (68.90%), Query Frame = 0


Query: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWV+EIRHPLLKRRIWLGTFETAEEAA+AYD+AAVLMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPTTPNG-----------DINNIVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDT 120
           NFP   N              ++ +++  S   LS IL AKL+KCC++PSPS+TCLRLDT
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDT 120

Query: 121 ENSNLGVWQKRAGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPV 180
            +S++GVWQKRAG +S S+WVMTVELG   S   T +    D + +P   V         
Sbjct: 121 ASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQETTSKASQDAILAPTTEV--------- 180

Query: 181 AEVAEIPSELEEEERMLALQMVEELLHIN 199
            E+     E+ +EE  +ALQM+EELL+ N
Sbjct: 181 -EIGGSREEVLDEEEKVALQMIEELLNTN 199

[Close]

BLAST of Lsi06G009690 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 3.7e-48
Identity = 99/196 (50.51%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
           +KFRGVRQR WGSWVSEIRHPLLKRR+WLGTFETAE AA+AYDQAA+LM+G+NAKTNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 65  TPNGD----INNIVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVWQKR 124
             + +    + ++ +   SPK LSE+L AKL+K C+  +PS+TCLRLDT++S++GVWQKR
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 125 AGQRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIPSELE 184
           AG +++  WVM +ELGN  + +  +            + +   + Q+   E  E  + + 
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVD------------LGLTTMNKQNVEKEEEEEEAIIS 184

Query: 185 EEERMLALQMVEELLH 197
           +E++ LA++M+EELL+
Sbjct: 185 DEDQ-LAMEMIEELLN 187

[Close]

BLAST of Lsi06G009690 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 102/194 (52.58%), Postives = 133/194 (68.56%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
           KKFRGVRQR WGSWVSEIRHPLLKRR+WLGTF+TAE AA+AYDQAAVLM+G++AKTNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 65  TPNGDINN--IVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVWQKRAG 124
             +   N+  I +   SPK LSE+L AKL+K C+  +P +TCLRLD ++S++GVWQKRAG
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 125 QRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIPSELEEE 184
            +++ NWV  VELG+K       N     ++++  M V   D Q               E
Sbjct: 125 SKTSPNWVKLVELGDKV------NARPGGDIETNKMKVRNEDVQ---------------E 177

Query: 185 ERMLALQMVEELLH 197
           +  +A+QM+EELL+
Sbjct: 185 DDQMAMQMIEELLN 177

[Close]

BLAST of Lsi06G009690 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 2.5e-44
Identity = 99/194 (51.03%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
           KKFRGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AA+AYDQAAVLM+G++AKTNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 65  TPNGDINN--IVTTKDSPKGLSEILQAKLKKCCRTPSPSMTCLRLDTENSNLGVWQKRAG 124
             +   N+  I +   SPK LSE+L AKL+K C+  +P +TCLRLD ++S++GVWQKRAG
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 125 QRSASNWVMTVELGNKKSHNNTNNDNDNDNVDSPMMAVVASDHQSPVAEVAEIPSELEEE 184
            +++ NWV  VELG+K       N     ++++  M V   D Q               E
Sbjct: 125 SKTSPNWVKLVELGDKV------NARPGGDIETNKMKVRNEDVQ---------------E 174

Query: 185 ERMLALQMVEELLH 197
           +  +A+QM+EELL+
Sbjct: 185 DDQMAMQMIEELLN 174

[Close]

BLAST of Lsi06G009690 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.0e-26
Identity = 60/90 (66.67%), Postives = 66/90 (73.33%), Query Frame = 0


Query: 5  KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMSGRNAKTNFPT 64
          ++FRGVRQRHWGSWVSEIRHPLLK RIWLGTFETAE+AA+AYD+AA LM G  A+TNFP 
Sbjct: 6  QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 65 TPNGDINNIVTTKDSPKGLSEILQAKLKKC 95
           PN           S K LS  L AKL KC
Sbjct: 66 NPN------AIPTSSSKLLSATLTAKLHKC 89

The following BLAST results are available for this feature:

BLAST of Lsi06G009690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	3.0e-55	55.98	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	5.2e-47	50.51	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	2.0e-46	52.58	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q94AW5	1.5e-25	66.67	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	3.4e-22	58.89	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of Lsi06G009690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BA41	6.7e-98	86.82	ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3C530	1.9e-97	86.36	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]
A0A5A7TUK2	4.3e-97	86.36	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]
A0A0A0LZE1	2.6e-94	84.30	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G340430 PE=...	[more]
A0A6J1F021	1.6e-88	81.31	ethylene-responsive transcription factor WIN1-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of Lsi06G009690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879891.1	2.9e-103	89.55	ethylene-responsive transcription factor WIN1-like [Benincasa hispida]	[more]
XP_008443999.1	1.4e-97	86.82	PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo]	[more]
TYK06434.1	4.0e-97	86.36	ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa]	[more]
KAA0046820.1	8.9e-97	86.36	ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa]	[more]
XP_004151061.2	2.4e-94	84.30	ethylene-responsive transcription factor WIN1 [Cucumis sativus]	[more]

BLAST of Lsi06G009690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15360.1	2.1e-56	55.98	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	3.7e-48	50.51	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	1.4e-47	52.58	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	2.5e-44	51.03	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	1.0e-26	66.67	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 29..45 score: 68.88 coord: 7..18 score: 61.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 6..69 e-value: 9.8E-39 score: 144.7
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 6..50 e-value: 7.1E-12 score: 45.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 6..63 score: 21.574963
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 5..65 e-value: 3.57123E-34 score: 114.676
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..65 e-value: 1.0E-25 score: 91.6
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..200
None	No IPR available	PANTHER	PTHR31194:SF49	AP2-EREBP TRANSCRIPTION FACTOR	coord: 1..200
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 6..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G009690.1	Lsi06G009690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0004672	protein kinase activity