Lsi06G008020 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G008020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	multisubstrate pseudouridine synthase 7
Location	chr06: 16764356 .. 16784865 (+)
RNA-Seq Expression	Lsi06G008020
Synteny	Lsi06G008020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAAGCTAGATCCTCCAACAGAAAGAAATAAGCTAGTGAAGGTTGGTCCCCAGTCCTAGCACTCAAAATATGATCCTAGAGATTTTTCTACTATTACTTATTATTGGCCGAGCCTGGTATTTGTGGTTTACGTGCCAACTTGGTCCATTTTGGGTGGGGTTATTTTATATTGATGAACACCAAATACCCTTGCAATTTATACAATAGTAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATATATATATATATATATATATATATATATATATATATATATATATATATTAGAAACTGAACTTTTATTGAGAAGAAAATTAAAATAATTCAACTACAAAAAAGAGCCAAACTGAAAAAGGGACTTTAGTCAAGTAAAATAAGACCTAAATAAGACGTAAATGATATTTAAAAAATAACTTCATCATTGAAACCCAAAGTGAAACATGGAATCTTACCATAGGACGAGACATCATGCAAAGATCTCTTAAGCCTTTTAAATATTATGTCATTTCTCTCTCTCAAAAGATTTCACAAGATCATACAAATCTTGACTCATCGCAAAAACTTTCCTTCATCATGGAGTGGTGAGTGAAGAAGTAATTCCTTGATTGCCTCTCTACAACCTTGAGATTTGAGTCATTTGACAAATCACAAGTCATACCTCTCTGGAATTAGGATCCATATACTTTTTCCCAGTTTCTATCTATTTCTGAACAAAACTGTAATCTCATTTTGAATCCATCTTGTGGCAAGTTGATGTGAATTGTATATTTGTGGGTCTATGCATTCTCTTAGTAAATTTTTGGAACTGGATATTTTTCTCTACATACGTTATTGAAATTAATATTAGTCTTGAAATCTGACAGACTGTAACTGCAGAAGATATCCTCACTGGAAACTTTACTATTAATGACGTTGTTCTTCCGTTGCCTGGGTGAGGGTAGAAAATATTTCTGACCTGTTGAAAATTTATTTTGGTCTTTTAGTTGTTGTTAACGTAGTTATTTGATTTATTTGTTTGTTTATTTCAACAGGTCAAGAGTAATCTATCCCACAAATGATATTGCTGAAGTGTATAATGATTTAGCAACTAAGGTCCTTTATTATTCTTAGCTTCTATTAAGTATCTTTCTTTATGTCAAAATATCCTAATTTTTTCTTTCTATGTTGTGTTTTATATTGTACTTTCTCGTTGATTTAATTTAGGATAAAATACACTTTTGGTCCTTGAGGTTTGAACTTGATGTCTATTTGGTCTTTGAAGTTTCAAAAGAGACTTTTTAACCCTTGAGATTTGAGAAATGGTTCTAAAAGTCCTAAGCTCATTTGACTGTTAGTTGACCTAATGAAAATATAATGTGGCAGTTAACTAGTTGATTGGACTATAGATGACATGGAAACTTTAAATGAGATGGAAAATATATAATTTTTATACTATTATTTTATGATCGGGTCTTTCCATCTCCACCTTCTCCTTCCATCCCCTTCTCCATTCCTCCCCCTCTCTTAAGCATCCTTTGGTTCCAACTCCCAAGTTGTTTAAGAGAGTAATTTCTATTTGGGCAATAGGCCCCAAGTTAGCATTAGCAACTAGGATTAAACTACATGACCACCACTGAAAATGAAAAGAAAAGTATAGACAAAGAAAAAGCTACATGTATTCTTTCTAGTGCATGTACTATGTGCTTACCACACTTGGTGCAAACCTAAAAGCATCCATGTAACTATTTTAGCTACATGGTTAGTTTGCATAATAGTATTAAATTTCCATCGACATGTCGATATTTCAACATTTCCATTTGTTCGATATCGATAAGAGGGATGAATCGATATTTCCATTGTATCGTAGAAAAATCCACGAAACACAAAAAATAAGCATCAATATGTCACTAATATAAATATAATATAAATAATAGACATGTTTACTTATTTGAAAATAATAAAATGTTTATTTCCTATTTTAAATTTATTTTTTTATTTTTATAATTTTTTCATAAATATCCATCGAAATCGATATTTTATCGAAATTTCCATAAAATTAAGACCTCAATATTTCCATTGATATCGATATTTTAAACCTTGGTTGGCATGCAGAATAGAAATTGATGGAAAACTTGAAGAAATCTTTCTTTATTGAGTTGAAAAAGCTGAGAACCTAATATTCAAGTAGTCTTCCATGCTTTCGAGAGGTTTGGTGATGGAAACTCAAATAAGACTTAAGAAAATATTATTCATCAATTCGAAAAGAGAGTTACATCCAGATTATATAGAAAGTATACAGCTGGGCAAGTTGTAACTAACACAACTAAATCTCCAACAACAAAACTCTTCTCCCTTCTTTGTTTATTACTCTGCAGCAGCCTTACGTTGTTGGCAGCTTCTAACTGAGCATGGACACTTTTGTGAAGTTCAACAATCCTCTCAGCCAGATGTCTTAGGGCTTTTAGTAGCTCTCTGTCTTCTTTCGAATATTTTGTTATGCATTTTGAGCATTAGACTCTTTCCATTATATCAATAAAAAGTTATGTTTCCTTTTTAAGAAAACAATCCTCTCGGCCATTTCTTCAGCTTCACAACTAACATCAACAGATGAAGGAATGTTAGCAAGGTCAACAGTTAGTCTACGTAAATGAATAAAAACTATCTCAAATGGTGACTTCCCTGTAGACTTGTTCTTCATGTGGTTAAATGAGTGTAAACAATCTCAAATGGAAAACCAAGTACAAAGCCCATCGAGAGGTCTTCTGATGTAGCCTAAAGAGATAACAAAGAGAATTCTCTCCAAGAATCAATATTGTAGATCTTTATTAGAATGAATAATATGTTTGATACAAGAGGGGAAGGTTCCTATTTATAGAGCTTTATTACAAGTGGGGGTAAAAAAGGAATTAACCTAGAATATTAACTAATTACCCAATTAACCCCTATTCTTCCTACATCATTCTACCCCTCCAAAAAGAAAACTCGTCCCCGAGTTTTAAAAAGAAAAAAAAAATGAAGCAAACAAGGTATGAAATAAACTTGTTCAATGGAGTATGACCAAACCATTCTCCTACATTTTGAACAAAAATATTATGATCAAAGTGATAAATTCGAGACAAAAAATCCAATATTGTCACCAAAAGATGAACTTCTCCATTGGCCATAAACTCAAAAAAGATGTTTCCTTCAAGCTCATTCAAAACTGTATTCAAAGGACCAATCACTAAAAAACCACCTTCCAAAGATAATTGTTCAAGAATCACGTCTTCTTTATCATTCGCTTCAAGTTCTTCAACTGTTTGGTGATCCATTTCGAAATCAATCAATGTGTCATTGTTCTTGCTTGATTCTTGCTTAGTGTTTGGTACTTCTATTCCATCTTCTTTGTTTGATTTTTCTTCTTTACTTGAGACAATTTCTGAAATAACATCTTTAAATTCTTCTTTTTCTTTTTCTTCTTCTACTTCGTTCTCATGATTTTTGTCCCAATCACCTCCATTAACTACATGGGTCTCAACAAGATTTTTTCCAATTTTATCTTCAAGATTTTGTAATTGAAAAGTTTTCAACTGTGATTCCTTTGTGTTTTCTTCTGTATATGAAATCAATCCACTCTTGAACTCTTGCAAATGAATTGATAAATGATCAATATGTTGAGTCATTTTTTCCAATGAACATTGGATTTCTTTTATTGGTTTCTTTATTTTCTCCAATGCTACGGGATCAAAGTAGACATTTTGTTGAATTCTTGGATATGTTTCAATCTCGTCGTGGGTATAGAACTCAACCATTGATTTTCTTGAATCAATCTTTCTTGATTGTGTTTCGTAACCAAAAGAATAATTTCGAGTCTTGAACATTCTTCTTAGGCTATAAAAGTCCATTCTTGATGATTCTTGATGATTCTTTAATTCATCTAACTCCCAATCTTTATGTTGATTTCTTGAAAAATGGGTTTGATTGGATCGTTGAGCCCTTTTTCGATGTTGTCGCCTTCTTATTTCATCCCAAACTGACTTAGAAACGTCTTCGGAGTCACTAGAATCAAGTTTCCAATGTGGGTAATGCATATGATAGGTTCTTTGAGAAAATCGAGCATGGGCAAAATTAGTATGTTGAAATTCTTCTTCTGAATCACTTGAGTCTGAATCCCAACATTGTTTTTGGAAGTAAAATTGATTATCTTGCCTATAACAACTGCTGGTTTTTTTCTTGAACATCTTCTTTGATCGGTAATAATCCATTCTTGCAAAATCTTGAAAAATCTTTGGGTTGTTCTTTCTTTCTTGGAATTTCAAGGGATCCCCCTAATTAGATGTGGGTTGTTTAGCAACGAGCACAACTCACGAAGCTCCCTCTTGTGACCGTCGTCACCAAGAGTTTCTCGGTCTTCCACCAGCGGCAGTCAACGTTGGCCCAGACGGTCGCTCTGATACCAAATTGATGTAGCCTAAAGAGATAACAAAGAGAATTCTCTCCAAGAATCAATATCGTAGATCTTTATTAGAATGAATAATATGTTTGATACAAGAGGGGAAGGTTCCTATTTATAGAGCTTTATTACAAGTGGGGGTAAAAAAGGAATTATCCTAGAATATTAACTAATTACCCAATTAACCCCTATTCTTCCTACATCATCTTCCTAAATAGTGTGTGGGATAGGCAATGGTGTGTATAGGCTTGTGTTTTGAAAAGATCCTTTACATGTCTAATGAATATAACAATGACGAATGAAGTTGGAGACATCACGTTGGATTTTTGGCCAAAAAAATCGTTTAGAGAGATCTAAAGTCTTGTCTTGGCCAAAGTGTTCACCAAGACACCCTTGAGTGAATGTCTTTAGTTAGGACTTCATGGAGAGAGCCAAAAGAAATGCACAGTCGAATAGGGAGATCTTTATTTCGACCAAAATATTCCCGACTTCCTGTATCAAATATATCTTTTCAGTGTAACTATCCTTGGCCATTATTTCAGAGCATAGTTTACATATCTAACTCCCTTTATCTATTTCTCTCTCTTGTACGCATATAATTGTAAATGGTCGGAAGGTTATTTTTCTAAAGATGTGCACAAAAACAAAGCATTCATGTTATCTATGCTCATACTTCTTGCTCATTTTCATCAAATTCAAGATCTCTTAGAGTGTTTATAGCTTTCAATAGCACTCTTCAGTACATTAATGACCCATAAGTATGTCACTTCGTAACTATTTTGCAAGTTAGATGATAATGATTACACTTTTGGGGAATGATGGTGAAGTTAAGAAGCACATATACGAAACACAAGATATGGATATGAGTACAACATGACACAAACACAGGGACACATCATTATTTTTAAATCCAAGACATGGCAAGAACACGTTTATTAAAATATACATTTTTAAACATGATGTAGCCTAAAGAATAAAAAGGAGATAATTATGAATCAAAACTTATCAAAAGGAGAATAGAAATCTTTATTATGAATCAAAAGTTATCAAAACAAGAACACAATCCTTCTATTTATAGAGAATTGGAAAGCAAACTAATCTATCCTAATTAATCAAAGAAACTAATCCTAATCCTAATAAACTAAGGAAACTAATCCTAATCCTAATCAATCAATGAAACTAGTCAATTAAGGATTTGACCAAGATACCCTACTTTACCCTAATCCTACTACATCGTTCTATCCCTCCCAAAAAAAACTCCTCCTCGAGTTTCAAAAGGAAAATGAAGAATACAAAGTTTTTGTTTTTGTTTTTCCATGATTTGTAAAATTTCCAAATAAAAACGTTAGCCTGTGTAAATCTTGCACTGCAACTGCAACTACAAAGATTGAAAGAGCCCATAAAAAATCTGAGAACTATGTAGAGCATGACTGTCATCAAAATCTTTCTTTGGTTGTGGAGAATTATATGCACGCCACCCACTAAAATTTTGCTCAATCATTATAGTCAAAGTTGGAGTATCAAAGCAATCCATAAACCCATTTGAAAATTTGTTGTTGCATAACCCAGAATTTGTGAAGAAATGAGTTGAAATAAACTCACGAAAAGGGAGGCAACAAATTGAAACTGGGAGGGACTGAACCCAGGTCGGATTGCATGATATATGCTAGGAATTGAGCACACATGTTGGGTTGAATCGCTTGGGTTGATTCAAATGGATCACGCGTTTCCATGTGTTCTTCTTCGTTGTCTTCCAAGCAATCAGCTACAACCAAAGATTCAAACTTCTTCAAATCGAGTTGCCCATGGTTGTCGTCTTCTTTGCCAAAATTACCTCCGTCTATTAATACGTCGTCTTTCTTGACATTTTTGTCTTTGCACGCAACAACACATGTTTCTTCGTTCTTTTCTTCCTCCTCTGTAACATTTGTGAATTCACGTGGGAACCTTAGAATCTTTCGTTCATGTGGCGGAAGTAATGGGTTAAAAATAGTCACACAACTTTTTCCTACGAACATTTTTTCATCCTCTTTGTTATATGCAATAACGCAAAAGGTTTTGTCGATTGATTTCCCCCCCGCCTCCCCCACGCGACTCCTGTAACTTTCTTTAACAATAGGTTTGATTCACCTTTGCCTTGGGTCATGTCACATTCATCTTTGTTTTTGCATGAATCTATTTCGTTTGTCTCTTCTTCTTCTTCTCCTTCATTCATTGCACGTCTTTTCTTCTTCTTCGTACTGTTGGTCTTTGCTTTCAGCTTGGGTTGCTTGAATTTCACTTGTGAGCTTCAATTGTGATTCATTGAACTTTTATTGTGCAGATTCACAACTTCGAGTGATTTCTAGCCTTTCTTGAACTTTCCCCAAAAGCCCCCAAATTGCATCCATTCCCTTCCGAAAATCTTCCTGACAAATGTTCTCATTTGAATATTTTTGTTTGAAAATGTTTCAACCACCATATTGGTGTTGGGATGATTCATGGGTGTTCTTAGATGTTAGTCATAATAATTTCTTTCACACTCTAAATCATTTAACTCCCAATTCTTATGTTGATTTCTTGAAAACCCGGTTTGATTCGATCCCCGGGCTTTTTACTGTTAATGTTGTTTTGTTATTTTGCCCCAAACTGCATTAGAATCTTCACCAGGGGCGCTAAAATCAAATTTTCAATGTGGATAATGATAGGTTTTTGTTGATTATTTCTTTTTTTATCAATATTTAATTGTATCTATTATGTTATATTTGCTGTATTTCTATTTTCCTTATTGTATTTATTTTTACCATATTTGTAATAGGAGTTTCTTTTATTTAAAAAACTTTTTTCCCTTCATAAGAATAACAAGAGAGGAAAATACATATTTTAAGCATGGTATCAGAGCGAAGAAAAAACCCTAAAAACTATCATAACCCTAGATTGAACCTCCACTGCCGCCGTCTGCCATACGCCGCCGCCCGCCATCCGTACGCCGCCGTCGCCGTCCGTGCACAGTACCTCAGCAGAGTGCGTCGTTTTTCTGCTCGCCATTCGGTCGTAAGGAGCTCGTCGTGGGTTTTTTGTTCTTTCTCCTTGGCTGTTCGTTCGTGGCTTGCATCGGTCGTGTCTGTGCCGTGGTACCTCTTTGGTTCAGCCGTAAGCCGCTGCGTCACTGTAACTGCCACCATGTCAGATGAAAAGGCACCTATTACAAAGGTTTCAGACAATCGAATCCACCTCAATCCTCCTACTGTCCAAATAACTTCTATTCAGACTTAATGGACATAATTTCCTTCGTTGGTCTCAAAGTGTTCGGATGTATATCCGTGGACAAGGAAAGATAGGCTATATTACGGGAGAGAAAAGCAACCCTCCTCCAGATGATCCATCCTTTGCTATATGGGATGCTGAAAATTCCATGGTCATGACGTGACTCGTTAACTCCATGGTTGAAGACATCAGCTGCAATTATATGTGCTACTCCACTGCAAAGGAATTGTGAGATAGTGTGACACAGATGTACTCTGATTTGGGAAACCAGTCACAAGTATTTGAGTTAAATCTCAAAATAGGAGATATGCGACAAGGAGGTCAATCAGTCACGCAATATTTTCACTTTCTTAAGAGAATCTGGCTAGATCTTGATCTCTTTGATACATATGAGTGGAAATCTACAGATGACCAAAAACATTACAGGAAAACTGTGGAGGACAGCCGTATCTACAAATTTCTTACTGGCCTCAATGTTGAATTTGATGAAATCCGAGGTAGAATTCTTGGGAAAATTATTTTTCCTACTATTAATGATGTTTTCTTTGAAGTTCGCAGGGAAGAAAATCGCAGGAATGTGATGATTGGAAAAAAACCTATGGAGTCAGTTGAGAGTTCTGCGTTGGTAACTGAACATACTGCCATGAAGACCTCTGATCATCCCAACAAGACACATGAAAATTCTCGGGTCTGGTGTGATCATTGCAATAAACCCCGCCATACACGTGAATTGGAAAAGTTCCAAACACAGTGAGAGAAATTTTCATCAGCATACCTCAACTGCAAATGTTGCTGAGTCTAATATGTTTAACAAGGAACAGATCGATCAAATCCTGAAACTGCTAAAGACTAGTTCTTCATCTGGTAATCCTAGTGTTTCCTTGGCACAATCAGGTAACTGTCCTCAAACCCTCTCTAGCTTACATTCATCTCCACGGATTATCGATTCTGGAGCCACTGATCATATGACTAGTTCCTCTTCTCTGTTTGAATCATACTCTCCTATATAGTAATGACAAAATTCGCATTGCCGATGGTAGTTTTGCCCCTATTGCGGGAAAAAGACATATTCCTTTGACCTAAAAAATTACTTTACGTTCTGTCCTTCATGTCCCTAAGTTAGCTTGCAATTTATTGTCAGTCAGTCAAATCTCTAAGGATACTAATTGCAGTGTTATTTTTTGTGGAACTCATTGTAACTTTCAGGATCAGGACTCGGGGGAGACGATTGGCAGTGCTAGAATGATTAATGGTCTCTATTATTTTGAGGATGAAGTTTCTTCTAGTAACACAAAAGTTCAGGGCTTGAGTAGTGTCAATTCTTCTTCTGTTCCAGAAACTATAATGCTTTGACATCGTAGATTAGGGTATCCAAATTTCTATTATTTAAAACATTTGTTTCCAAATTTATTTAAAGGGATTGATTGTTCTATTTTTTGGTGTGAAAGTTGCATTTTTGCCAAACATCATCGCTCCACTTATTTATCTAATCCTTACGAACCTTCCTCACCTTTTTCTTTAGTTCATACTGATGTTTGGGGTCCTTCTAAAGTTCTGACACATAGTGGTAAACGTTGGTTTGTCACCTTCATAGATGACCACACTCGTCTAACTTGACTTTATTTGCTAACCAAAAAGTCTGAGGTAAAAGAAGTCTTTGTTCGGTTTTACAATATGATTGAAACAATTTCAAACTAAAATTCGCATTCTTCACTCTGATAATGGTACTGAATATTTCAACAAACAATTACATACTTTCCTGCAAGATAAGGGTATTTTTCATCAAGCTACTTGTCGTGATACTCCTCAGCAAAATGGAATTGTTGAATGCAAAAATAGACATCTCCTTGAAGTTGCTCGTGCCCTTATGTTTTCTATGAATGTTCCGAAATATTTGTGGGGTGACGCAATTTTGAAAGCGACCTACTTGATCAATCGAATGCCAACCAAAGTTTTAAATTTTCAAACTCCTCTCAATTACTTTAAAGAGTCATTTCCTACTGTTAGGCTATTTTTTGACCTCGCAATCAAATTATTTGGTTGTCTTGCTTACGTTCATACTTCTCCTCTTTCTCGAACAAAACTTGACCCCCGAGCCATTAAATGCATTTTTGTAGGTTATGCTCCCAGTAAGAAGGCTTATAAATGTTTTGACCCTTCAACCAACAAGTTTTTTGAGAGTCTGGATGTTGTTTTCTTGGAAAATCAACCTTACTTTAGCCAAAATTCTCTTCAGGGGGAGATATCTAACCTTGAAGATAATTTTTGGGACACCTCACCTATCCCAAACGTCATTAATTTTGAAATTATAAGGTCTAGTCCTTTGATGCCTAGTATGGTAAGTTCCTCTTCAGGGGGAGAAACACTGCGAACTGTTGTGACTGGCCAACCACTTGAACTTCAGGTTTATACTAGAAGAAACTTGACTCAAAGGGATCGAGAACAGACAGTTGATCTATCACAGGACCAGTCTAATACTCCGATGAATGATCCTGAAGTTCCAGGTGACATACACTCTTCCTTTTCTCCCAGTTCTTCGTCTCATAATTCCTTAACTGAATTTTCTGACCTTGATATTCCAATTGCCCTTAGGAAAGGTACCCATAAGTGTATTAAATATCCTATTGCAAATTATCTTTCTTATCATAGATTGTCAGACAGTCATAAAGCCTTCACATCCAAAATAACCGACCTGTTTGTTCCAAGGAATATACAGGAGGCCCTAAACGATATGAATTGGAAATTAGCAGTGATGGAAGAAATGAGTGCGCTGAAACAAAATTGTACATGGGACATAGTTGATTTACCAAACGATAAAAAAACAGTGGGATGCAAGTGGGTGTTCACTGTCAAATGTAATGCGGATGGTAGTATTGAAAGATACAAGGCCAGATTGGTTGCTAAGGGGTTCACTCAGACTTTTGTTATCGGTTGCAGTTAATCTTGATTGGCCCATTTACCAACTTGATGTTAAGAATGCTTTTCTCAATGGGGATCTTGAAGAAGAGGTATTTATGGATCTGCCACCTGGCTTCGAGATGGATCTCGGGATTAACAAAGTGTGCAGGCTAAAGAAATCATTATACGGCCTTAAACAGTCTCCAAGAGCCTGGTTTGAACGTTTTGAAAAGGCAGTAACTAGCTATGGATTCAGTCAAAGTCAAGCCGATTATACTATGTTTTACAAGCATATAGAACAGGACAAAGTTGTGGTTTTGATCGTGTATGTTGATGATATAGTTCTTACAAGTAATGATGAGACAGAACTGATGTTTGTGAAGAAAAAACTGGCAAATGACTTCCAAATCAAAGACCTAGGAACCTTAAAGTACTTCCTAGGCATGGAGTTTGCCAGATCCAAAAGTGGTATTGTTGTCAACCAAAAGAAGTATGTTCTTGACCTATTAAAAGAGACAGGTTTACTTGGGTGTAAGGCAGCTGATACACCTATTGAGCAGAATCTGAAATTGGAAGCTGCAACTGAAAAAGAAATAAAAGAGAGAGAAAAGTACCAAAGACTTGTGGGGAGACTCATATATCTCTCACACACACGTCCTGACATCGCTTTTGAAGTCAGCATGCATGTTCATGCATGCTCCTGGAGCAGCACACTTTGATGCCGTCTATAGAATCTTAAGATATTTGAAGGGTACCCCTGGAAAAGACATATTATTTAGAAAACATAATCAACTAAATGTTGAAGTTTACACTGATGCAAATTGGGCAGGTAGCACCATTGATAGGAGATCCACTTCTGGTTATTGCTCCTTTGTTGGAGGAAATCTTGTGACTTGACGAAATAAAAAACAGAATGTGGTTGCGAGAAGTAGCGCTGAAGCAGAATTTAGGGCTCTAGCCCATGGTATTTGTGAGGGCATATGGATAAAAAGACTGCTAGAAGAAATGAGATTCTATCAGACAATTCCCATATGCATTTATTGTGATAATAAAGCATCAATTTCCATTGCTCACAATCCAATCCTTCATGATAGGACAAAACATATTGAAGTTGAAAAACACTTCATAAAGGAAAAGATTGATGCTGGAATAATATGCATACTCTATCTCCCAACAACAGAGCAAATTGCAGATGTGTTAACTAAAGGTCTTCCAAAGTGGCAATTCAATAACCTGATTGACAAGCTGGCTATGAATGACATCTTCCAACCAGCTTGAGGGGGAGTGTTGATTATTTCCTTTTTTATCAATATTTAATTGTATCTATTATGTTATATTTGCTGGATTTCTATTTTTCTTATTGTATTTATTTTTACCATATTTGTAATAGGAGTTTCTTTTATTTAAGAAACTCTTTTCCCTTCATAAGAATAACAAGAGATGAAAATACATATTTTAAGCAGTTTTTTTTAGGGAAACGATGGACGTGGCTGCTCGCCTTTCTCTTATTGAGAGTCACCCCTTTCGCCTTGGAAGGAGAGATGTGAGAGTCTGGAGGCCTAATCCTTTGGAAGGGTTTTCGTGTAAGTCTTTCTTCGAGTGTTTGGTTAATCCTTCTCCTTTGGATGAGTCTGTCTTTTCGTCGCTATGGAGGATTAAGGTTTCTAGAAAGGTGATATTCTTCACTTGGCAGGTTCTCCATGGCCGTATTAGTATGTTGGATAGGCTTGTTAGGATGGTGCCATCGTTGTTGGGCCTTTTTGTTGTATTCTTTGTCGAAAGACGAAGGAAGAATTGGACCATATTCTTTGGCATTGTGATTTTGCGAGCTTTGTCTAGGACTCTTTTTTCCAGATGTTTGGCATGATGTATGCTCACCACAAAGAGGTTAAAGACATGATCGAGGAAACCACAAAGAGGTTAAAGACATGATCGAGGAGTTCCTTATCAATTTGCTGTTTAGGGAGAGAGACCGTTTTCTTTGGCTTGCTAGTGTTTGTGCTATTGTTTGGGTGTTGTGGGGTGAGAGGAATAGTAGGGTGTTTAGGAGGGTTGAAAGGGAGCTAGAGATATATGGTCTCTTGTTCGTTTTCATGTGTCTCATTGGGCGTCGATTTCGAAGGTTTTTTTGTAAGTATTCTATGACATGATTTTGTATAGCTGGGGTCCTTTCTTGTAAAGGGAGACCCCTTTTTTATGGGTTTGGTTTTTGTATGCTTGTGTATTCTTTCATTTTTCCTCAATGAAAGTAGTTGTTCATATAAAAAAAAAAAAATGATAGGTTCTTTGAGAAAATCAGACATGAGCTATTATTATGCTGGAATTCTTCTTCTGAATCACCTGAGTTAGAATTCCAGCACTGTTTTTGGGAGTAAATTTGACTTTCTTGCCTACCAACAATTGTATTTTTTTTTGGGCAACCTCCTCGACCGATAATAGTCCATTCTTGCAAAATCTTGAAAAAAGCTTCGATCTCTTCTTTCTTTTCTAGAATTTAAAGGGTTCCCGCTAAGTAAATGTGTGTTGTTTGGCAACAAGCACAACTCATAAAATTCCCTCTTGCGATTGGCGCCATCAAGAGTTTTCTAGTCTTCCACCAGTGGCAGACAACATTGGCCCAGACGGCTGCTCTGATACCAAATTGATGTAGTCTAAAGAATAAAAAGGAGATAATACTCCAAGAATAAAATTAAAGTCTTTATTATGAATCAAAAGTTATCAAAACAAGAACATGATCGAGGATTTATAGAGAATTGGAAAGTAAACTGATCCTAATCCTAATTAATCAAAGAAACTAATTCTAAACCTAATAAACCAAGGAAACTAATCCTAATTCTAATCAATCAATGAATCTAATCCTAAACCTAATCAATCAAGGATTTGACCAAGATACCCTACTTTACCCTAATCCTACTACATCAAAATATTTATCATTTTTATACAAATTAGTTTGATGTATTTCACTCTCAAAATTTATTATTTTTGTCATATGTGTCCATTTAATATACTTAACACTTCGATATATGTCTACCAAATGTTGGACCTACTTTTTCCCTAAAAAAATGTTGGACCTTTAACTTTGTATAACTAGTGTTTGACCCATCTATTGCACTAGCAAGTACTTGATATGTGTTCAAAACATGTCGGAGTGTCCAAGTGTCTAACACATGTTGGACAAGGACACCCCTAGCCAAACTAAGAACAAGGATGGTGGAGTTTTTATTTATTTGTTTAAGAACAATGCGGTGGAGTTTGGAGCTTGTGCTCTCTTTTTTTCCCTTGTAGTAGCATTTTACCTGTTCAACCCTGTTTTCTATTTGTTTTTACTAATCTTGATGTCTATTTATCTAGGATTCGATTAGCCTGATGGAGACTGTTCATAACGTAAAGTATGTTAAAACTCTAGTGAGATTAAGCCATCTTCGCCCCTTACTATTTTCATTTTGTAGAATGTTGTATTTGTATAATCTTTATATTGTACTTTATGGTACATGTCCATAGGGAATTTTCGATTACCAATATGACTGGAAGCTACCGGAGAGTTTTTCAAAAACCAAAGGACTATGAGTGGTACCCTCTTTACGTTGTTTAAATTATTAATTTTTAGCATTTATCTATTCGTCAGAAGATTAAATTCTGTTGTTTGGCAGGGAATTGATCTCATATGTTGATCGTAATTTACCCCTGGCACAGAGTGATTTACAGAACCTTTTGAAGTCTCAAAGTGTTGAAATTAGCAAGGAAGACAAGATAGCCGATAAATCTAAAAATGAAGATTTATTGGATTCCACAGAACAATCAGGGTGCTGTAAAAAGAATGTTAAACTTGAAGCAGGTGAAAATGAAAATGAAAATGAAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGTTGAGCTTTACTCTGCCCACGTCTTCTTATGCTACGATGGCAATTAGAGAATTGTTGAAAACATCAACTTCTGTGAGATCTATTTTGTCCCTTTTCATTACTAGCTAATAATTATTGTCTTATTCAAATGTAATTTTCAGTTAAAGTAAAATTATGCAAACTTTCCGCACAAACCTTTACTGTAGAGTACATGCAATCTGGGTGTCGTGTAACCTTTACTTTAGAAGTCATGGATTTATAGTTGGTTTGTTATTTCAGGTCGCTTTCCACAAAACTTTAAACTAATGATCAACTTCGCCAGTCATGGAGACAGCTGGGAATCCAGAGAAGTTCGGTAGGAATGGAAAGGTAAAACTTTTACCTTACTGCTATATCAGGAGTTACTCCACGTATTGGTTGAATGTGAGTGGGAAAATAATGAAGAATACAGAATGTGATTCTAAGTATCTCTGGTACATCACAAATGTTGCTGGTTGATTATGATTGTTTAGAGGATAATGGCTTCTTTTGTTCCAAATACAGTTGTCAAATGCAGTTGTCCTTCAAAAATAGGTGGGTGAGGCAATTTTAATCTTAAACTTTCAATTTCATCAATTTAAACCCTATGTCTGAATAAATATGGTTACTTTTGAAAGGAAGTTAATAGAATCAACAAGTAAATTGCAAAAAATTCAACTAACAAATTGAGCAGTTGGTGGGCCCGAGAGGTACTTCAAATCATTGGCCTATTATCCTTACCTCGGGGTGTAAGAGTTGGGGGCCTTGCCCCTTTCGTTTTGAGAACATGTGGCTTCAACATCCCTCTTTCAAATTCCAATTCCCTAGGTGGTGGAATGATCAGGTTCTTGGTAGATGGAAGGTTATCAGTTAATGGGTAAGTTGAGGGCTTTGCAAAAGAAGCTTGAGATCTAGAATAAAGAGGTTTTTGGTGATGTTAGGCCGAAAAAACAAGAGATTTTGGCTAAGATTGAGGGGTTGGATGATTTGGAGGTGAAGCGTCTTCTTGATGACCAGTGCAAGGCCGAAAGGGATTCCCTTAGCCTCCACTTTGCTGAGGTGGTTAGGAAGGTGACCTTCAGTTGGTGGCAAAAAGTCAAGGTGGCTTGGGCTAAGGAAGGAGACTGTAATACTTCTTTCTTCACAAAATGGCTAGTGGTCGGAAGAGTAGGAATAGGATTGGCCTTCTGGTCAAGGAGTCTGGGAAGGTCCTCAAGGAAGATAAGGAGGTGGAGGAAGAGATTATTTCCTTCTTTTCGAATCTCTATGGGCTAGAGGTCTACCCCAAACCTTTTGTCCATGGGATTGATTGGTGGCCGATTTCGGAGGGGGATAAGGAAAGTCTGACTATGCCTGTTTCTATGGTGTGTCAGTTTTTACGATACTTTGGAGGATTAAGATTCCTAGGAAGGTGAGGTTCTTTACATGGCAAGTTCTTCATGCCCGTGCTATCACTATGAATTGACTTGTGAGGAAGATGTCTTCGCTTGTTGGGCTTTTTTGTTGTATTCTTTGTCGGAAGGTGGAGGAAGGCTTGGATCATATTCTCTGGTGTTGTGATCTTGCGAAGATGTTTGGCATGATGTATGCTCGTCACAGTTATGTTATATGATCGAGGAGTTCCTCCTCGATCTACCTTTTGGAGAGAAGGGCCGTTTTTTATGGCTTGTGAGGGTGTGTGCGCTTTTACGGGTCTTGTGGGGGAGTAGAATAGAAGGGTGTTTAGAGGTTTGGAAAGAGGGATCCTTCAGAGATTTGGTCCCTTGTCTATTTTCATGTATGCTTATGGGCTTTGATTTCAAAGACCTTTTGTAACTACTCTATAGGCACTATTGTGCATAGTTGGAGTCTCTTTCTTTAAAGAGTCTTTCATTTTTTTCTCAATGAAAGTTGCTGATTTCATTTAAAAAAACTAACAAATTGAGCAAATAAAAAATCCTCAAACATAGCATTAGCAATAAAGTGTACAAATCCAACTAGCTAAAAACATCCGACATAAGTAGAGAAGCTAATCCTGGCAAAAAAATGGTCTTATTCAATTATAAGAATGACTATAGTTCTATCCATGGAAGCACAGATACAGATACGAGCACGGATACAACTTGGACACATCGACGCATCATTTTAAAAAATCTAAGACACAGACATGACAAGGACACAATTATTACATACATTTTTTAAAATATATATCATTTTTAAACAAGAACGAAATTTAAAGTCAATGAGCTTAGGCATCTATATTCCTAAAAAATTAGTTTGGTATACTTCGCTCTCAAACTTAATTAGTTTTGCCATATATATGTATCTATTTAGTATATGTAACAAGTGTTTGATACATGTCTACTAATCTTGGTTCTGTTTTGACTTTGTACAACTAGTGTCTAGTATATCGTACTAACAAGTGTTGGAGTGTACAAGTCTTTGATGTTGGATACGCTAGCCAAACTAAAGTAATTGTGCTTCATAGGTTCTACCAATCTTTATAAAAAAAAAAATCAGTACATCTTATGTGTAGTTTAGATAATCAATGATTTTCACACAATGATTGTGCAAATATGCACAATCAATCAGCAAGTGATATGTATTTTTATCGTTCTCCACCAGGATTAATTAAATAAATCTACTAACCTAAACTCATTTTTGGGTGAGTTCTTATGAGTAAACAATTTATAACTTTTGTATCTAAATTCTAATTGCAAGAATGAAAATAGGTGGAATTAGCCAGCAGTAAAGAATGAGGACTTGGGAATTTCTTAGAAAAGCGATTAAGACAGACCAGTAAGACCTAAAATAAGAAATAGGTTTTGATTGAGGGGTTGCTTGTATTTTACAATTGCTAAAACATAACTTTTGATCTCTCAACCACGCAAAATAAACATGGAATCCTCCCCGTCCCAGATTTCCTATAGCTGAAGTTTAATTTTTTTTAAACCCCATCCTAAATTAAGTTGTTGTAACATGCATTAGGTGAGTTGTTCTTTAGAACCACCTCACTTAACTAAGAACTAACTCTAATGCAGAGCTATTGTGGTATTGAGCAATCGGCTTTCTTTTATTTTTCCCAAAACAAAGAAACAGTACACAAATTAGTTGGCCAAACTTAACTCGTGCTTAACCATTCTAAAACACTCAAAATCCAGACAAAAGTGTGTTAGCAACTATATGAGTTCCACACAAGTGTCCTTAACCGTCACCTAAAAGAAATTGATTCATCAATTTGAACGTCTCTAATTCAAAACCGAACGTGAAACTTTAGTTTCATTCGGCTCCTTTATGAAAGATAGATAAAATGCAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAACAAGAAGAAAAAAAGCACCCACAACATCTATGTTAGCCTTTCCATTAGAACGCATTCATGACTCGTTTCATAAATGATCCCTATATAAGACGAGATTAGTTGGAAACTGCTTCAAGCAAATATACATTCAAGCAAATGTACACATTCTTACCTCTTTTTGTTTTTCCTGACAAACTAAACAATTTTTTTTTCTTGTAATATTCCTGAACTGAGAACACTTTTTAGACCTTGGATAGGGACAAACACATAATTGACTATTTTGGATAATAGAGAAGAAAAAACAAGCAAAAATTAGAAAAAAGAGGTGGACATAAGAGAACAGCAAGAAAAAAGAGGAAAAAGCACATATAGAAATTGTAGAAGCCTGAGATATCATTCTATTTGCTCAAGTAATAAGAGGTTTTTCGTTAGTAACTCGATCAATTCTTAGAAAATATATTGTCTTACCCTCATTGATAATAGCTAAAAGTCTTATCCGTATGTTATTATTTCAATTTTTTGAATGGTCCGAGGATTTTAAAAATTAATGGCTATTGAGAACAAATCAAATCAGGTGGTTATATTTCTCAATCTTTTTCACTTGCTCCTACCAAACTGAGGTCGAAAGGATTGAGAAAAATCAGTCATTCACAACGTCTGACGAAGGATTTCTCGAAAAGTTAAGGATTAGTAATCCTTTTTATAAATCAAATGGATTCGGAAAGAAACGGTTGTATTCAGCTACAAAGTATATTTTATACACTGCGAGAGGTTTCATTTTTTCGTTAATGGGAGTTCTAAGTATCGGTTTATATGGTTCTAATGAACCAACTTTAAATTTTGAAACATGAACTAATCACTCGTATCCTATAGCACTGGAATACCTATATCAGATTGTTATTGCTTTTGTTGTCAAATCACCAATTATACCCTTACATACATGGTTACCAGATACCCACGAAGAGACACATTACAACACTCGTATGCGTCTAGCTGGGTTGTCAGTTCTCCAGTTTTCTTTTCTTTTTTTTTTTTCTTCCCTCTTGTGTGCATGCGTGGGTGCACCCGTAGCCCTCAATATTCTCTTTTGAAGTTACATACATGACAAATGAACCAAGATTTTCATATGCAAATCTTGTGCCCACATGGCTCAATGTAGTTGCATCGAATATGTAGGCTTTTATTATTACCTATTTCTGGTGGTTACTTTCTTGAATAATTCTAACATTTGCTATAAACTTGCCCGTTTTGCTGTTTGCAGAGAGAGAACCTCGGGATAAGGGCACTTTGGAGAACTAACACAGAAATCCTTCTACTGAGACGATTTGCAGTTTCAGTTTCGACCAGTTCCATTTGAGGTTGGGCCATATCTAAGACAGTTAAGTTTCTACATTCACTTGTATGAAAATCCCATAAATGAATGTCTAAGGATGTACGGAAACGTTTTTAAATGTGCAAGGATTTGTATTGAATCGAATTAAACAAATTAAATCGATCATACAGTGATGATGATTCTGAGGTTCTTTCCCAACTCTGAGCATTGTATTCATTTGCTGGCAATTTTTAAGTGAATGAAAGGACCCTTTATTGTGCCT

mRNA sequence

ATGTGCAAGCTAGATCCTCCAACAGAAAGAAATAAGCTAGTGAAGACTGTAACTGCAGAAGATATCCTCACTGGAAACTTTACTATTAATGACGTTGTTCTTCCGTTGCCTGGGTCAAGAGTAATCTATCCCACAAATGATATTGCTGAAGTGTATAATGATTTAGCAACTAAGGATTCGATTAGCCTGATGGAGACTGTTCATAACGTAAAGGAATTTTCGATTACCAATATGACTGGAAGCTACCGGAGAGTTTTTCAAAAACCAAAGGACTATGAGTGGGAATTGATCTCATATGTTGATCGTAATTTACCCCTGGCACAGAGTGATTTACAGAACCTTTTGAAGTCTCAAAGTGTTGAAATTAGCAAGGAAGACAAGATAGCCGATAAATCTAAAAATGAAGATTTATTGGATTCCACAGAACAATCAGGGTGCTGTAAAAAGAATGTTAAACTTGAAGCAGGTGAAAATGAAAATGAAAATGAAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGTTGAGCTTTACTCTGCCCACGTCTTCTTATGCTACGATGGCAATTAGAGAATTGTTGAAAACATCAACTTCTGTGAGATCTATTTTGTCCCTTTTCATTACTAGCTAATAATTATTGTCTTATTCAAATGTAATTTTCAGTTAAAGTAAAATTATGCAAACTTTCCGCACAAACCTTTACTGTAGAGTACATGCAATCTGGGTGTCGTGTAACCTTTACTTTAGAAGTCATGGATTTATAGTTGGTTTGTTATTTCAGGTCGCTTTCCACAAAACTTTAAACTAATGATCAACTTCGCCAGTCATGGAGACAGCTGGGAATCCAGAGAAGTTCGGTAGGAATGGAAAGAGAGAGAACCTCGGGATAAGGGCACTTTGGAGAACTAACACAGAAATCCTTCTACTGAGACGATTTGCAGTTTCAGTTTCGACCAGTTCCATTTGAGGTTGGGCCATATCTAAGACAGTTAAGTTTCTACATTCACTTGTATGAAAATCCCATAAATGAATGTCTAAGGATGTACGGAAACGTTTTTAAATGTGCAAGGATTTGTATTGAATCGAATTAAACAAATTAAATCGATCATACAGTGATGATGATTCTGAGGTTCTTTCCCAACTCTGAGCATTGTATTCATTTGCTGGCAATTTTTAAGTGAATGAAAGGACCCTTTATTGTGCCT

Coding sequence (CDS)

ATGTGCAAGCTAGATCCTCCAACAGAAAGAAATAAGCTAGTGAAGACTGTAACTGCAGAAGATATCCTCACTGGAAACTTTACTATTAATGACGTTGTTCTTCCGTTGCCTGGGTCAAGAGTAATCTATCCCACAAATGATATTGCTGAAGTGTATAATGATTTAGCAACTAAGGATTCGATTAGCCTGATGGAGACTGTTCATAACGTAAAGGAATTTTCGATTACCAATATGACTGGAAGCTACCGGAGAGTTTTTCAAAAACCAAAGGACTATGAGTGGGAATTGATCTCATATGTTGATCGTAATTTACCCCTGGCACAGAGTGATTTACAGAACCTTTTGAAGTCTCAAAGTGTTGAAATTAGCAAGGAAGACAAGATAGCCGATAAATCTAAAAATGAAGATTTATTGGATTCCACAGAACAATCAGGGTGCTGTAAAAAGAATGTTAAACTTGAAGCAGGTGAAAATGAAAATGAAAATGAAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGTTGAGCTTTACTCTGCCCACGTCTTCTTATGCTACGATGGCAATTAGAGAATTGTTGAAAACATCAACTTCTGTGAGATCTATTTTGTCCCTTTTCATTACTAGCTAA

Protein sequence

MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPTSSYATMAIRELLKTSTSVRSILSLFITS

Homology

[Close]

BLAST of Lsi06G008020 vs. ExPASy Swiss-Prot
Match: Q08DI8 (Pseudouridylate synthase 7 homolog OS=Bos taurus OX=9913 GN=PUS7 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.4e-18
Identity = 61/207 (29.47%), Postives = 102/207 (49.28%), Query Frame = 0


Query: 7   PTERNKLVKTVTA---EDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISL 66
           P   + ++K  TA   E+    N++I+DVV+PLPG  VIYP + I+E Y ++ T D++ +
Sbjct: 497 PVPGDLVLKGATATFIEEDDVNNYSIHDVVMPLPGFDVIYPKHKISEAYREMLTADNLDI 556

Query: 67  METVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEIS 126
               H ++++S   ++G+YR++  +P++  WE+++Y D  +PL  +D+ NL        +
Sbjct: 557 DNMRHKIRDYS---LSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGRPPPVFA 616

Query: 127 KEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPT 186
            E K                                              ALK+ F+LP 
Sbjct: 617 SEGK--------------------------------------------YRALKMDFSLPP 656

Query: 187 SSYATMAIRELLKTSTSVRSILSLFIT 211
           S+YATMAIRE+LK  TS+++   L  T
Sbjct: 677 STYATMAIREVLKMDTSIKNQTQLNTT 656

[Close]

BLAST of Lsi06G008020 vs. ExPASy Swiss-Prot
Match: Q96PZ0 (Pseudouridylate synthase 7 homolog OS=Homo sapiens OX=9606 GN=PUS7 PE=1 SV=2)

HSP 1 Score: 92.0 bits (227), Expect = 8.4e-18
Identity = 61/207 (29.47%), Postives = 101/207 (48.79%), Query Frame = 0


Query: 7   PTERNKLVKTVTA---EDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISL 66
           P   + ++K  TA   E+    N++I+DVV+PLPG  VIYP + I E Y ++ T D++ +
Sbjct: 499 PVPGDLVLKGATATYIEEDDVNNYSIHDVVMPLPGFDVIYPKHKIQEAYREMLTADNLDI 558

Query: 67  METVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEIS 126
               H ++++S   ++G+YR++  +P++  WE+++Y D  +PL  +D+ NL        +
Sbjct: 559 DNMRHKIRDYS---LSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFA 618

Query: 127 KEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPT 186
            E K                                              ALK+ F+LP 
Sbjct: 619 SEGK--------------------------------------------YRALKMDFSLPP 658

Query: 187 SSYATMAIRELLKTSTSVRSILSLFIT 211
           S+YATMAIRE+LK  TS+++   L  T
Sbjct: 679 STYATMAIREVLKMDTSIKNQTQLNTT 658

[Close]

BLAST of Lsi06G008020 vs. ExPASy Swiss-Prot
Match: Q91VU7 (Pseudouridylate synthase 7 homolog OS=Mus musculus OX=10090 GN=Pus7 PE=2 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = 0


Query: 26  NFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMETVHNVKEFSITNMTGSYRRV 85
           N++I+DVV+PLPG  VIYP + I+E Y ++   D++ +    H ++++S   ++G+YRR+
Sbjct: 520 NYSIHDVVMPLPGFDVIYPKHKISEAYREMLAADNLDIDNMRHTIRDYS---LSGAYRRI 579

Query: 86  FQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKEDKIADKSKNEDLLDSTEQSG 145
             +P+   WE+++Y D  +PL  +D+ NL        + E K                  
Sbjct: 580 IIRPQSVSWEVVAYDDPKIPLFNTDVDNLEGKPPPVFASEGK------------------ 639

Query: 146 CCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPTSSYATMAIRELLKTSTSVRS 204
                                       ALK+ F+LP S+YATMAIRE+LK  TS+++
Sbjct: 640 --------------------------YRALKMDFSLPPSTYATMAIREVLKMDTSIKN 650

[Close]

BLAST of Lsi06G008020 vs. ExPASy Swiss-Prot
Match: Q08647 (Multisubstrate pseudouridine synthase 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PUS7 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.6e-16
Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 0


Query: 15  KTVTAEDILTGNFTINDVVLPLPGSRVIYPTN-DIAEVYNDLATKDSISLMETVHNVKEF 74
           K VT EDI +  +T+ DVVLP PG  V+YP+N ++ ++Y D+   D++        V++F
Sbjct: 511 KAVTQEDIDSVKYTMEDVVLPSPGFDVLYPSNEELKQLYVDILKADNMDPFNMRRKVRDF 570

Query: 75  SITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKEDKIADKSK 134
           S   + GSYR V QKPK  E+ +I Y D +  L  +DL                      
Sbjct: 571 S---LAGSYRTVIQKPKSLEYRIIHYDDPSQQLVNTDL---------------------- 630

Query: 135 NEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPTSSYATMAIRE 194
             D+L++T      +K +K +  +    ++ G+ T     A+ L F L TS+YATMA+RE
Sbjct: 631 --DILNNTRAKESGQKYMKAKL-DRYMPDKGGEKT-----AVVLKFQLGTSAYATMALRE 666

Query: 195 LLKTSTSVR 203
           L+K  TS R
Sbjct: 691 LMKLETSRR 666

[Close]

BLAST of Lsi06G008020 vs. ExPASy Swiss-Prot
Match: O74343 (Multisubstrate pseudouridine synthase 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pus7 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.5e-11
Identity = 51/181 (28.18%), Postives = 87/181 (48.07%), Query Frame = 0


Query: 20  EDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMETVHNVKEFSITNMT 79
           E+    NF+I D+VLPLPG  VIYP N+  ++Y  +  + S+  +      +E S   + 
Sbjct: 531 EEDEVNNFSIYDIVLPLPGRNVIYPKNETFDIYKSVMNEASLDPLNMSRKDRELS---LP 590

Query: 80  GSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKEDKIADKSKNEDLLD 139
           G YR++  +P++ E+  I Y +    L  +D ++ L+++S+ +S                
Sbjct: 591 GDYRKLLVRPENMEFNFIKYDNMEQQLILTD-KDRLENRSISVS---------------- 650

Query: 140 STEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPTSSYATMAIRELLKTST 199
                                 +E G+ T     A+ L F LP+S+YATMA+RE L+T+T
Sbjct: 651 ----------------------SEVGKHT-----AVTLKFVLPSSAYATMALREALRTAT 664

Query: 200 S 201
           +
Sbjct: 711 A 664

[Close]

BLAST of Lsi06G008020 vs. ExPASy TrEMBL
Match: A0A1S3CHJ1 (pseudouridylate synthase 7 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501017 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.7e-85
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKL  PTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRV+YP NDIAEVYNDLATKDS
Sbjct: 513 MCKLGLPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPGSRVLYPANDIAEVYNDLATKDS 572

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL E+VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL  LLKSQSV
Sbjct: 573 ISLTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV 632

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIA+KSK ED LDST+QS CCKK+++LEAG   NE E GQGT DPQMALKLSFT
Sbjct: 633 EISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAG--GNETEYGQGTPDPQMALKLSFT 692

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 693 LPASSYATMAIRELLKTSTSV 711

[Close]

BLAST of Lsi06G008020 vs. ExPASy TrEMBL
Match: A0A1S3CI40 (pseudouridylate synthase 7 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501017 PE=3 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.7e-85
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKL  PTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRV+YP NDIAEVYNDLATKDS
Sbjct: 483 MCKLGLPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPGSRVLYPANDIAEVYNDLATKDS 542

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL E+VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL  LLKSQSV
Sbjct: 543 ISLTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV 602

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIA+KSK ED LDST+QS CCKK+++LEAG   NE E GQGT DPQMALKLSFT
Sbjct: 603 EISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAG--GNETEYGQGTPDPQMALKLSFT 662

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 663 LPASSYATMAIRELLKTSTSV 681

[Close]

BLAST of Lsi06G008020 vs. ExPASy TrEMBL
Match: A0A5A7V3D9 (Pseudouridylate synthase 7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00610 PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.4e-84
Identity = 170/201 (84.58%), Postives = 183/201 (91.04%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKL  PTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRV+YP NDIAEVYNDLATKDS
Sbjct: 476 MCKLGLPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPGSRVLYPANDIAEVYNDLATKDS 535

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL E+VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL  LLKSQSV
Sbjct: 536 ISLTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV 595

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
            ISKE+KIA+KSK ED LDST+QS CCKK+++LEAG   NE E GQGT DPQMALKLSFT
Sbjct: 596 GISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAG--GNETEYGQGTPDPQMALKLSFT 655

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 656 LPASSYATMAIRELLKTSTSV 674

[Close]

BLAST of Lsi06G008020 vs. ExPASy TrEMBL
Match: A0A6J1F560 (multisubstrate pseudouridine synthase 7 OS=Cucurbita moschata OX=3662 GN=LOC111440943 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.0e-83
Identity = 166/201 (82.59%), Postives = 182/201 (90.55%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           +C LD PTERNKLVK VTAED+ +GNFTI+DVVLPLPGSRVIYPTNDIAEVY+DLA KDS
Sbjct: 513 ICTLDLPTERNKLVKAVTAEDVQSGNFTIDDVVLPLPGSRVIYPTNDIAEVYHDLAAKDS 572

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           I+L ET+HNVKEFSITNMTGSYR VFQ+PKDYEWELISYVDRNLPLA+SDL NLLKSQSV
Sbjct: 573 INLTETIHNVKEFSITNMTGSYRSVFQRPKDYEWELISYVDRNLPLAESDLDNLLKSQSV 632

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EI+KE+K+ DKSK+ED LDSTEQSG CKK+ KL+A    NENENG+  QDPQMALKLSF 
Sbjct: 633 EIAKEEKMHDKSKDEDSLDSTEQSGSCKKSNKLQA----NENENGEAAQDPQMALKLSFN 692

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LPTSSYATMAIRELLKTSTSV
Sbjct: 693 LPTSSYATMAIRELLKTSTSV 709

[Close]

BLAST of Lsi06G008020 vs. ExPASy TrEMBL
Match: A0A6J1KMR0 (multisubstrate pseudouridine synthase 7 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111496015 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.5e-81
Identity = 163/201 (81.09%), Postives = 180/201 (89.55%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           +C LD PTERNK VK V+AED+ +GNFTI+DVVLPLPGSRVIYPTNDIAEVY+DLA KDS
Sbjct: 513 ICTLDLPTERNKHVKAVSAEDVQSGNFTIDDVVLPLPGSRVIYPTNDIAEVYHDLAAKDS 572

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           I+L ET+HNVKEFSITNMTGSYR VFQ+PKDYEWELISYVDRNLPLA+SDL NLLKS SV
Sbjct: 573 INLTETIHNVKEFSITNMTGSYRSVFQRPKDYEWELISYVDRNLPLAESDLDNLLKSLSV 632

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EI+KE+K+ DKSK+ED LDSTEQSG CKK+ KL+A    NENENG+  QDPQMALKLSF 
Sbjct: 633 EITKEEKMHDKSKDEDSLDSTEQSGSCKKSNKLQA----NENENGEAAQDPQMALKLSFN 692

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LPTSSYATMAIRELLKTSTSV
Sbjct: 693 LPTSSYATMAIRELLKTSTSV 709

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: XP_038878530.1 (pseudouridylate synthase 7 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 362.5 bits (929), Expect = 2.5e-96
Identity = 193/210 (91.90%), Postives = 202/210 (96.19%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKLDPPTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRVIYPTNDIAEVYNDLATKDS
Sbjct: 512 MCKLDPPTERNKLVKAVTAEDLLSGNFTIDDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 571

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISLMETVHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL NLLKSQSV
Sbjct: 572 ISLMETVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSV 631

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENE--NGQGTQDPQMALKLS 180
           EISKE+KIADKS NEDLLDSTEQSGCCKKNV+LEAGENENENE  N QG+QD Q+ALKLS
Sbjct: 632 EISKEEKIADKSINEDLLDSTEQSGCCKKNVQLEAGENENENENKNEQGSQD-QLALKLS 691

Query: 181 FTLPTSSYATMAIRELLKTSTSVRSILSLF 209
           FTLP SSYATMAIRELLKTSTSVRSILSLF
Sbjct: 692 FTLPASSYATMAIRELLKTSTSVRSILSLF 720

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: XP_038878531.1 (pseudouridylate synthase 7 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 4.5e-93
Identity = 186/203 (91.63%), Postives = 195/203 (96.06%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKLDPPTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRVIYPTNDIAEVYNDLATKDS
Sbjct: 512 MCKLDPPTERNKLVKAVTAEDLLSGNFTIDDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 571

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISLMETVHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL NLLKSQSV
Sbjct: 572 ISLMETVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSV 631

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENE--NGQGTQDPQMALKLS 180
           EISKE+KIADKS NEDLLDSTEQSGCCKKNV+LEAGENENENE  N QG+QD Q+ALKLS
Sbjct: 632 EISKEEKIADKSINEDLLDSTEQSGCCKKNVQLEAGENENENENKNEQGSQD-QLALKLS 691

Query: 181 FTLPTSSYATMAIRELLKTSTSV 202
           FTLP SSYATMAIRELLKTSTSV
Sbjct: 692 FTLPASSYATMAIRELLKTSTSV 713

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: XP_031745921.1 (multisubstrate pseudouridine synthase 7-like, partial [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 1.7e-87
Identity = 174/201 (86.57%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           +CKL  PTER+KLVK VTA D+L+GNFTI+DVVLPLPGSRV+YPTNDIAEVYNDLATKDS
Sbjct: 463 VCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDS 522

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL  +VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL NLLKSQSV
Sbjct: 523 ISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSV 582

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIADKSKNED LDST+QS CCKKN++LEAG    ENENGQGTQDPQMALKLSFT
Sbjct: 583 EISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAG--GKENENGQGTQDPQMALKLSFT 642

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 643 LPASSYATMAIRELLKTSTSV 661

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: XP_011660284.1 (LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 1.7e-87
Identity = 174/201 (86.57%), Postives = 187/201 (93.03%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           +CKL  PTER+KLVK VTA D+L+GNFTI+DVVLPLPGSRV+YPTNDIAEVYNDLATKDS
Sbjct: 513 VCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDS 572

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL  +VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL NLLKSQSV
Sbjct: 573 ISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSV 632

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIADKSKNED LDST+QS CCKKN++LEAG    ENENGQGTQDPQMALKLSFT
Sbjct: 633 EISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAG--GKENENGQGTQDPQMALKLSFT 692

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 693 LPASSYATMAIRELLKTSTSV 711

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: XP_008462718.1 (PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 324.3 bits (830), Expect = 7.7e-85
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKL  PTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRV+YP NDIAEVYNDLATKDS
Sbjct: 483 MCKLGLPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPGSRVLYPANDIAEVYNDLATKDS 542

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL E+VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL  LLKSQSV
Sbjct: 543 ISLTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV 602

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIA+KSK ED LDST+QS CCKK+++LEAG   NE E GQGT DPQMALKLSFT
Sbjct: 603 EISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAG--GNETEYGQGTPDPQMALKLSFT 662

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 663 LPASSYATMAIRELLKTSTSV 681

[Close]

BLAST of Lsi06G008020 vs. TAIR 10
Match: AT3G04820.1 (Pseudouridine synthase family protein )

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-51
Identity = 109/200 (54.50%), Postives = 144/200 (72.00%), Query Frame = 0


Query: 4   LDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISL 63
           +D P ER+ LVK V+ ED+  G ++ +D+VLPLPGSRVIYP+NDIAE+Y+DLA KD ISL
Sbjct: 513 VDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISL 572

Query: 64  METVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVE-I 123
            E++H VKEFSIT+MTG YRRVFQKP D+EWEL++Y D N PLA++DL  +  ++ VE +
Sbjct: 573 TESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRIPMNKPVEKV 632

Query: 124 SKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQ-GTQDPQMALKLSFTL 183
              ++I D+S   D    T      + N+K +   NE E + G   ++  QMALK++ TL
Sbjct: 633 GSTEEIEDESMKSD----TNPHDSGETNLKDQTDSNEAEKDTGNPDSEQTQMALKMALTL 692

Query: 184 PTSSYATMAIRELLKTSTSV 202
           P+S YATMAIRELLKTSTSV
Sbjct: 693 PSSCYATMAIRELLKTSTSV 708

The following BLAST results are available for this feature:

BLAST of Lsi06G008020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q08DI8	6.4e-18	29.47	Pseudouridylate synthase 7 homolog OS=Bos taurus OX=9913 GN=PUS7 PE=2 SV=1	[more]
Q96PZ0	8.4e-18	29.47	Pseudouridylate synthase 7 homolog OS=Homo sapiens OX=9606 GN=PUS7 PE=1 SV=2	[more]
Q91VU7	1.1e-17	30.34	Pseudouridylate synthase 7 homolog OS=Mus musculus OX=10090 GN=Pus7 PE=2 SV=2	[more]
Q08647	4.6e-16	34.39	Multisubstrate pseudouridine synthase 7 OS=Saccharomyces cerevisiae (strain ATCC...	[more]
O74343	4.5e-11	28.18	Multisubstrate pseudouridine synthase 7 OS=Schizosaccharomyces pombe (strain 972...	[more]

BLAST of Lsi06G008020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CHJ1	3.7e-85	85.07	pseudouridylate synthase 7 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A1S3CI40	3.7e-85	85.07	pseudouridylate synthase 7 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
A0A5A7V3D9	2.4e-84	84.58	Pseudouridylate synthase 7-like protein isoform X1 OS=Cucumis melo var. makuwa O...	[more]
A0A6J1F560	2.0e-83	82.59	multisubstrate pseudouridine synthase 7 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KMR0	2.5e-81	81.09	multisubstrate pseudouridine synthase 7 isoform X1 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Lsi06G008020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878530.1	2.5e-96	91.90	pseudouridylate synthase 7 homolog isoform X1 [Benincasa hispida]	[more]
XP_038878531.1	4.5e-93	91.63	pseudouridylate synthase 7 homolog isoform X2 [Benincasa hispida]	[more]
XP_031745921.1	1.7e-87	86.57	multisubstrate pseudouridine synthase 7-like, partial [Cucumis sativus]	[more]
XP_011660284.1	1.7e-87	86.57	LOW QUALITY PROTEIN: pseudouridylate synthase 7 homolog [Cucumis sativus]	[more]
XP_008462718.1	7.7e-85	85.07	PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Cucumis melo]	[more]

BLAST of Lsi06G008020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04820.1	2.0e-51	54.50	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042214	Pseudouridine synthase, TruD, catalytic domain	GENE3D	3.30.2350.20	TruD, catalytic domain	coord: 4..199 e-value: 6.9E-31 score: 109.6
None	No IPR available	PANTHER	PTHR13326:SF8	OS01G0773000 PROTEIN	coord: 9..203
IPR001656	Pseudouridine synthase, TruD	PANTHER	PTHR13326	TRNA PSEUDOURIDINE SYNTHASE D	coord: 9..203
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 16..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G008020.1	Lsi06G008020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0008033	tRNA processing
biological_process	GO:0009451	RNA modification
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding