Lsi06G007950 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G007950
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	S-protein homolog
Location	chr06: 16590189 .. 16590632 (-)
RNA-Seq Expression	Lsi06G007950
Synteny	Lsi06G007950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCATCTACAACACTTGCACTATCTTTGTTAATCTTATTTTTCGCTAGCCTACATGCCATTCAAGGAGCATTCTTAATCCCACCAGAAACTACAGTCACAATTATCAACCAAATTGAATATGGCATACCAGTCAACGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATACCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTCAGACCCAATCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACCGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGCATATGCCTGCAAAACCCAAAAACTGCTGACAGCAAACAAATTTGCTACAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

mRNA sequence

ATGGCTTCATCTACAACACTTGCACTATCTTTGTTAATCTTATTTTTCGCTAGCCTACATGCCATTCAAGGAGCATTCTTAATCCCACCAGAAACTACAGTCACAATTATCAACCAAATTGAATATGGCATACCAGTCAACGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATACCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTCAGACCCAATCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACCGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGCATATGCCTGCAAAACCCAAAAACTGCTGACAGCAAACAAATTTGCTACAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

Coding sequence (CDS)

ATGGCTTCATCTACAACACTTGCACTATCTTTGTTAATCTTATTTTTCGCTAGCCTACATGCCATTCAAGGAGCATTCTTAATCCCACCAGAAACTACAGTCACAATTATCAACCAAATTGAATATGGCATACCAGTCAACGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATACCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTCAGACCCAATCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACCGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGCATATGCCTGCAAAACCCAAAAACTGCTGACAGCAAACAAATTTGCTACAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

Protein sequence

MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSICLQNPKTADSKQICYNYGDKEPTSIM

Homology

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BLAST of Lsi06G007950 vs. ExPASy Swiss-Prot
Match: O23020 (S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 2.8e-20
Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 12  LILFFASLHAIQGAFLIPP---ETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSY 71
           ++ FF  L    G   +PP    T VT+ N I  G P+ +HCKSK DDLG+H +P  Q Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIG-GPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 72  SFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSIC 123
            FKF+PNL  +TLF+CSF W  Q +   FD+++ +RD G+C  CQW I     C
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFK--SFDIYDAQRDQGICDDCQWEIKPDGPC 116

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BLAST of Lsi06G007950 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 34  VTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQ 93
           V I N++  G+ +N+HCKS +DDLG+  L    S+SFKFR ++VGTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYRFDVFNHKRDAG----LCTTCQWIIHEYSICLQNPKTADSKQICYNY 139
             RFD+++  RD       C  C W I     C+ + ++  +  ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

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BLAST of Lsi06G007950 vs. ExPASy Swiss-Prot
Match: F4JZG1 (S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.1e-15
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 31  ETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLV-GTTLFYCSFVWT 90
           ++ VTI N++  G  + +HCKS +DDLG+  L    S+SFKFRP++V G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQHQIYRFDVFNHKRDA---GL-CTTCQWIIHEYSICLQNPKTADSKQICYNY 139
           GQ +   F++++  RD    G+ C  C W I +Y  C +  +  D+  ICY++
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDW 146

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BLAST of Lsi06G007950 vs. ExPASy Swiss-Prot
Match: P0DN93 (S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-15
Identity = 44/123 (35.77%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M +S+ + + L I+ F  + +  G +    +T VT+ N I     + + C+SK+DDLG H
Sbjct: 1   MKNSSKIFVVLSIILFYVISSCHG-YNPFAKTVVTVTNNISPQTTLTISCRSKDDDLGEH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            L  GQ++ +KFRP+   TTLF C F+W   + +  FD +   RD G C +C W I+  S
Sbjct: 61  LLLHGQAFLWKFRPSWFRTTLFTCKFLW--NNNVKWFDTYRSDRDQGHCYSCNWSINADS 120

Query: 121 ICL 124
            C+
Sbjct: 121 ACI 120

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BLAST of Lsi06G007950 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.6e-12
Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 33  TVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQH 92
           TV I N +   + +  HCKSK+DDLG  TL  G+S+SF F     G TL++CSF W   +
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSW--PN 108

Query: 93  QIYRFDVFNHKRDAG---LCTT--CQWIIHEYSICLQNPKTADSKQICY 137
           + + FD++   RD+G    C +  C W I     C  N +T     +CY
Sbjct: 109 ESHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQF-DLCY 154

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BLAST of Lsi06G007950 vs. ExPASy TrEMBL
Match: A0A5A7TWM4 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004070 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 4.2e-59
Identity = 111/144 (77.08%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLILF  +L AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPT 145
           +CLQ+PK    K ICYNYGDKEP+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPS 143

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BLAST of Lsi06G007950 vs. ExPASy TrEMBL
Match: A0A5D3CQ97 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002410 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.1e-59
Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLI F  +L AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+PK    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

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BLAST of Lsi06G007950 vs. ExPASy TrEMBL
Match: A0A5D3C9Q3 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001780 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.1e-59
Identity = 109/146 (74.66%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLI F  +LH IQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CS  WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+PK    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. ExPASy TrEMBL
Match: A0A5D3CTD8 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002420 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.1e-59
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLI F  ++ AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+PK    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. ExPASy TrEMBL
Match: A0A5D3CQA2 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00110 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.1e-59
Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLI F  +L AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+P T   K ICYNYGDKEP+ +
Sbjct: 121 MCLQDP-TNPGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: KAA0045871.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 237.3 bits (604), Expect = 8.6e-59
Identity = 111/144 (77.08%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLILF  +L AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLILFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPT 145
           +CLQ+PK    K ICYNYGDKEP+
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPS 143

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: TYK08032.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 109/146 (74.66%), Postives = 121/146 (82.88%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLI F  +LH IQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNLHTIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CS  WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSITWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+PK    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: KGN55015.2 (hypothetical protein Csa_011982, partial [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 113/147 (76.87%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLILF  +L AIQG+  I P TTV I NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 40  MGSSPTLALSLLILFLCNLCAIQGSIFIQPVTTVVIFNQIEYGIPVTVHCKSKNDDLGVH 99

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F+VF+ KRDAG CTTC WIIHEYS
Sbjct: 100 VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNVFDDKRDAGKCTTCTWIIHEYS 159

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSIM 148
           +CLQ+PK    K+ICYNYGDKEP  I+
Sbjct: 160 MCLQDPKN-PGKEICYNYGDKEPGIIV 185

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: KAA0063208.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 110/146 (75.34%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLI F  +L AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+PK    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: TYK13716.1 (self-incompatibility protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 109/146 (74.66%), Postives = 122/146 (83.56%), Query Frame = 0


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALSLLI F  ++ AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSLLIFFLCNIRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+PK    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. TAIR 10
Match: AT1G04645.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 99.8 bits (247), Expect = 2.0e-21
Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 12  LILFFASLHAIQGAFLIPP---ETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSY 71
           ++ FF  L    G   +PP    T VT+ N I  G P+ +HCKSK DDLG+H +P  Q Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIG-GPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 72  SFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSIC 123
            FKF+PNL  +TLF+CSF W  Q +   FD+++ +RD G+C  CQW I     C
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFK--SFDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Lsi06G007950 vs. TAIR 10
Match: AT3G16970.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 90.1 bits (222), Expect = 1.6e-18
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 30  PETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWT 89
           P TTV I N +   +P+  HCKSKNDDLG   + +  ++SF+FRP++ G TLF+C F+W 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW- 85

Query: 90  GQHQIYRFDVFNHKRDAGL----CTTCQWIIHEYSICLQNPKTADSKQIC 136
              +++ FD++   RD       C  C+W I +   C  N K ++   +C
Sbjct: 86  -DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVC 132

[Close]

BLAST of Lsi06G007950 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 89.0 bits (219), Expect = 3.5e-18
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0


Query: 34  VTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQ 93
           V I N++  G+ +N+HCKS +DDLG+  L    S+SFKFR ++VGTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYRFDVFNHKRDAG----LCTTCQWIIHEYSICLQNPKTADSKQICYNY 139
             RFD+++  RD       C  C W I     C+ + ++  +  ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Lsi06G007950 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 86.3 bits (212), Expect = 2.3e-17
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 0


Query: 8   ALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQS 67
           +L   +LFF  +     A +    T+V I N +  G+P+  HCKS+ DDLG  +L  G+S
Sbjct: 3   SLETCLLFFVMV-MFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRS 62

Query: 68  YSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGL----CTTCQWIIHEYSICL 127
           +SF F P++ G TLFYC F W  +  I  FD++   RD       C  C+W I +   C 
Sbjct: 63  WSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWKIRKNGPCK 122

Query: 128 QNPKTADSKQICYNY 139
              KT      CY++
Sbjct: 123 FYKKTGMFDH-CYSW 133

[Close]

BLAST of Lsi06G007950 vs. TAIR 10
Match: AT5G12070.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 83.6 bits (205), Expect = 1.5e-16
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 31  ETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLV-GTTLFYCSFVWT 90
           ++ VTI N++  G  + +HCKS +DDLG+  L    S+SFKFRP++V G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQHQIYRFDVFNHKRDA---GL-CTTCQWIIHEYSICLQNPKTADSKQICYNY 139
           GQ +   F++++  RD    G+ C  C W I +Y  C +  +  D+  ICY++
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDW 146

The following BLAST results are available for this feature:

BLAST of Lsi06G007950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23020	2.8e-20	44.74	S-protein homolog 5 OS=Arabidopsis thaliana OX=3702 GN=SPH5 PE=2 SV=1	[more]
Q9FMQ4	5.0e-17	41.28	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F4JZG1	2.1e-15	39.82	S-protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=SPH4 PE=3 SV=1	[more]
P0DN93	4.6e-15	35.77	S-protein homolog 29 OS=Arabidopsis thaliana OX=3702 GN=SPH29 PE=3 SV=1	[more]
F4JLQ5	1.6e-12	37.61	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]

BLAST of Lsi06G007950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWM4	4.2e-59	77.08	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CQ97	7.1e-59	75.34	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3C9Q3	7.1e-59	74.66	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00...	[more]
A0A5D3CTD8	7.1e-59	74.66	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G00...	[more]
A0A5D3CQA2	7.1e-59	75.34	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0...	[more]

BLAST of Lsi06G007950 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045871.1	8.6e-59	77.08	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK08032.1	1.5e-58	74.66	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]
KGN55015.2	1.5e-58	76.87	hypothetical protein Csa_011982, partial [Cucumis sativus]	[more]
KAA0063208.1	1.5e-58	75.34	self-incompatibility protein 1 [Cucumis melo var. makuwa] >TYK13715.1 self-incom...	[more]
TYK13716.1	1.5e-58	74.66	self-incompatibility protein 1 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi06G007950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04645.1	2.0e-21	44.74	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.6e-18	37.27	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	3.5e-18	41.28	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	2.3e-17	35.56	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.5e-16	39.82	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..137 e-value: 3.0E-28 score: 98.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 5..128
None	No IPR available	PANTHER	PTHR31232:SF76	S-PROTEIN HOMOLOG 2	coord: 5..128
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 30..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007950.1	Lsi06G007950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen