Lsi06G007640 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ Homology
BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A6J1HAZ7 (uncharacterized protein LOC111461698 OS=Cucurbita moschata OX=3662 GN=LOC111461698 PE=4 SV=1) HSP 1 Score: 250.4 bits (638), Expect = 3.8e-63 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A6J1JIQ1 (uncharacterized protein LOC111485460 OS=Cucurbita maxima OX=3661 GN=LOC111485460 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 7.1e-62 Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0
BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A0A0LXY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665910 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61 Identity = 111/117 (94.87%), Postives = 115/117 (98.29%), Query Frame = 0
BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A5A7T4W1 (Neprosin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00400 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61 Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A1S3B8R5 (uncharacterized protein LOC103487273 OS=Cucumis melo OX=3656 GN=LOC103487273 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61 Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0
BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_022961080.1 (uncharacterized protein LOC111461698 [Cucurbita moschata]) HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Lsi06G007640 vs. NCBI nr
Match: KAG6590299.1 (hypothetical protein SDJN03_15722, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63 Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_038878455.1 (uncharacterized protein LOC120070684 isoform X1 [Benincasa hispida]) HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63 Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_038878456.1 (uncharacterized protein LOC120070684 isoform X2 [Benincasa hispida]) HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63 Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0
BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_023516458.1 (uncharacterized protein LOC111780317 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 249.2 bits (635), Expect = 1.7e-62 Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0
BLAST of Lsi06G007640 vs. TAIR 10
Match: AT5G18460.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 209.5 bits (532), Expect = 1.4e-54 Identity = 91/116 (78.45%), Postives = 107/116 (92.24%), Query Frame = 0
BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G70550.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41 Identity = 71/114 (62.28%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G23340.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41 Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0
BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G70550.1 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41 Identity = 71/114 (62.28%), Postives = 88/114 (77.19%), Query Frame = 0
BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G23340.2 (Protein of Unknown Function (DUF239) ) HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41 Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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