Lsi06G007640 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G007640
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionProtein of Unknown Function (DUF239)
Locationchr06: 14587050 .. 14587403 (-)
RNA-Seq ExpressionLsi06G007640
SyntenyLsi06G007640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA

mRNA sequence

ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA

Coding sequence (CDS)

ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA

Protein sequence

MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ
Homology
BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A6J1HAZ7 (uncharacterized protein LOC111461698 OS=Cucurbita moschata OX=3662 GN=LOC111461698 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 3.8e-63
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHL DHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA
Sbjct: 310 MGFGDNTLVGYWPAELFTHLGDHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 369

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 370 SYFRNLEIVDSDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 426

BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A6J1JIQ1 (uncharacterized protein LOC111485460 OS=Cucurbita maxima OX=3661 GN=LOC111485460 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.1e-62
Identity = 112/116 (96.55%), Postives = 114/116 (98.28%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHL DHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA
Sbjct: 310 MGFGDNTLVGYWPAELFTHLGDHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 369

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD+DNSLS VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKC
Sbjct: 370 SYFRNLEIVDSDNSLSDVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKC 425

BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A0A0LXY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665910 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.6e-61
Identity = 111/117 (94.87%), Postives = 115/117 (98.29%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+NTLVGYWPAELFTHLADHATMVEWGGEVVNSR NGQHTSTQMGSGHFPDDGF KA
Sbjct: 323 MGFGENTLVGYWPAELFTHLADHATMVEWGGEVVNSRINGQHTSTQMGSGHFPDDGFAKA 382

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLS+VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 383 SYFRNLEIVDSDNSLSSVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 439

BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A5A7T4W1 (Neprosin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold506G00400 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+NTLVGYWPAELFTHLADHATMVEWGGEVVNSR NGQHTSTQMGSGHFPDDGF KA
Sbjct: 122 MGFGENTLVGYWPAELFTHLADHATMVEWGGEVVNSRINGQHTSTQMGSGHFPDDGFAKA 181

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLS VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 182 SYFRNLEIVDSDNSLSGVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 238

BLAST of Lsi06G007640 vs. ExPASy TrEMBL
Match: A0A1S3B8R5 (uncharacterized protein LOC103487273 OS=Cucumis melo OX=3656 GN=LOC103487273 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.1e-61
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+NTLVGYWPAELFTHLADHATMVEWGGEVVNSR NGQHTSTQMGSGHFPDDGF KA
Sbjct: 321 MGFGENTLVGYWPAELFTHLADHATMVEWGGEVVNSRINGQHTSTQMGSGHFPDDGFAKA 380

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLS VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 381 SYFRNLEIVDSDNSLSGVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 437

BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_022961080.1 (uncharacterized protein LOC111461698 [Cucurbita moschata])

HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHL DHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA
Sbjct: 310 MGFGDNTLVGYWPAELFTHLGDHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 369

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 370 SYFRNLEIVDSDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 426

BLAST of Lsi06G007640 vs. NCBI nr
Match: KAG6590299.1 (hypothetical protein SDJN03_15722, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63
Identity = 114/117 (97.44%), Postives = 116/117 (99.15%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHL DHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA
Sbjct: 310 MGFGDNTLVGYWPAELFTHLGDHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 369

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 370 SYFRNLEIVDSDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 426

BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_038878455.1 (uncharacterized protein LOC120070684 isoform X1 [Benincasa hispida])

HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63
Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA
Sbjct: 338 MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 397

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLSAVQDISI+AENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 398 SYFRNLEIVDSDNSLSAVQDISIIAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 454

BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_038878456.1 (uncharacterized protein LOC120070684 isoform X2 [Benincasa hispida])

HSP 1 Score: 250.4 bits (638), Expect = 7.8e-63
Identity = 114/117 (97.44%), Postives = 117/117 (100.00%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA
Sbjct: 331 MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 390

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLSAVQDISI+AENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 391 SYFRNLEIVDSDNSLSAVQDISIIAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 447

BLAST of Lsi06G007640 vs. NCBI nr
Match: XP_023516458.1 (uncharacterized protein LOC111780317 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 1.7e-62
Identity = 113/117 (96.58%), Postives = 116/117 (99.15%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHL DHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA
Sbjct: 311 MGFGDNTLVGYWPAELFTHLGDHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 370

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLS+VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 371 SYFRNLEIVDSDNSLSSVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 427

BLAST of Lsi06G007640 vs. TAIR 10
Match: AT5G18460.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 209.5 bits (532), Expect = 1.4e-54
Identity = 91/116 (78.45%), Postives = 107/116 (92.24%), Query Frame = 0

Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MG GD+TLVGYWPAELFTHLADHAT VEWGGEVVN+RA+G+HT+TQMGSGHFPD+GFGKA
Sbjct: 314 MGLGDSTLVGYWPAELFTHLADHATTVEWGGEVVNTRASGRHTTTQMGSGHFPDEGFGKA 373

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLE+VD+DNSL  V D+ I+AENT CY+I SSY+++WGT+FYYGGPG NP+C
Sbjct: 374 SYFRNLEVVDSDNSLVPVHDVKILAENTECYDIKSSYSNEWGTYFYYGGPGFNPRC 429

BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G70550.2 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41
Identity = 71/114 (62.28%), Postives = 88/114 (77.19%), Query Frame = 0

Query: 3   FGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASY 62
           FG   LVGYWPA LFTHL  H +MV++GGE+VN+R  G HT+TQMGSGHF  +GFGKASY
Sbjct: 296 FGSGALVGYWPAFLFTHLKQHGSMVQFGGEIVNNRPGGSHTTTQMGSGHFAGEGFGKASY 355

Query: 63  FRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           FRNL+IVD DN+L    ++ I+A++ NCY+I    N  WG +FYYGGPGKNP+C
Sbjct: 356 FRNLQIVDWDNTLIPASNLKILADHPNCYDIRGGTNRVWGNYFYYGGPGKNPRC 409

BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G23340.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0

Query: 3   FGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASY 62
           FG  TLVGYWP  LFTHL +H  MV++GGE+VN+R  G HTSTQMGSGHF  +GFGKASY
Sbjct: 295 FGSGTLVGYWPVSLFTHLREHGNMVQFGGEIVNTRPGGSHTSTQMGSGHFAGEGFGKASY 354

Query: 63  FRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           FRNL++VD DN+L  + ++ ++A++ NCY+I    N  WG  FYYGGPGKN KC
Sbjct: 355 FRNLQMVDWDNTLIPISNLKVLADHPNCYDIRGGVNRVWGNFFYYGGPGKNSKC 408

BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G70550.1 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41
Identity = 71/114 (62.28%), Postives = 88/114 (77.19%), Query Frame = 0

Query: 3   FGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASY 62
           FG   LVGYWPA LFTHL  H +MV++GGE+VN+R  G HT+TQMGSGHF  +GFGKASY
Sbjct: 351 FGSGALVGYWPAFLFTHLKQHGSMVQFGGEIVNNRPGGSHTTTQMGSGHFAGEGFGKASY 410

Query: 63  FRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           FRNL+IVD DN+L    ++ I+A++ NCY+I    N  WG +FYYGGPGKNP+C
Sbjct: 411 FRNLQIVDWDNTLIPASNLKILADHPNCYDIRGGTNRVWGNYFYYGGPGKNPRC 464

BLAST of Lsi06G007640 vs. TAIR 10
Match: AT1G23340.2 (Protein of Unknown Function (DUF239) )

HSP 1 Score: 164.9 bits (416), Expect = 4.0e-41
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 0

Query: 3   FGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASY 62
           FG  TLVGYWP  LFTHL +H  MV++GGE+VN+R  G HTSTQMGSGHF  +GFGKASY
Sbjct: 295 FGSGTLVGYWPVSLFTHLREHGNMVQFGGEIVNTRPGGSHTSTQMGSGHFAGEGFGKASY 354

Query: 63  FRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           FRNL++VD DN+L  + ++ ++A++ NCY+I    N  WG  FYYGGPGKN KC
Sbjct: 355 FRNLQMVDWDNTLIPISNLKVLADHPNCYDIRGGVNRVWGNFFYYGGPGKNSKC 408

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HAZ73.8e-6397.44uncharacterized protein LOC111461698 OS=Cucurbita moschata OX=3662 GN=LOC1114616... [more]
A0A6J1JIQ17.1e-6296.55uncharacterized protein LOC111485460 OS=Cucurbita maxima OX=3661 GN=LOC111485460... [more]
A0A0A0LXY91.6e-6194.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665910 PE=4 SV=1[more]
A0A5A7T4W12.1e-6194.87Neprosin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3B8R52.1e-6194.87uncharacterized protein LOC103487273 OS=Cucumis melo OX=3656 GN=LOC103487273 PE=... [more]
Match NameE-valueIdentityDescription
XP_022961080.17.8e-6397.44uncharacterized protein LOC111461698 [Cucurbita moschata][more]
KAG6590299.17.8e-6397.44hypothetical protein SDJN03_15722, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038878455.17.8e-6397.44uncharacterized protein LOC120070684 isoform X1 [Benincasa hispida][more]
XP_038878456.17.8e-6397.44uncharacterized protein LOC120070684 isoform X2 [Benincasa hispida][more]
XP_023516458.11.7e-6296.58uncharacterized protein LOC111780317 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT5G18460.11.4e-5478.45Protein of Unknown Function (DUF239) [more]
AT1G70550.24.0e-4162.28Protein of Unknown Function (DUF239) [more]
AT1G23340.14.0e-4161.40Protein of Unknown Function (DUF239) [more]
AT1G70550.14.0e-4162.28Protein of Unknown Function (DUF239) [more]
AT1G23340.24.0e-4161.40Protein of Unknown Function (DUF239) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004314NeprosinPFAMPF03080Neprosincoord: 3..110
e-value: 2.6E-38
score: 131.6
NoneNo IPR availablePANTHERPTHR31589PROTEIN, PUTATIVE (DUF239)-RELATED-RELATEDcoord: 1..115
NoneNo IPR availablePANTHERPTHR31589:SF77CARBOXYL-TERMINAL PEPTIDASEcoord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G007640.1Lsi06G007640.1mRNA