Lsi06G006000 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G006000
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Tubulin beta chain
Location	chr06: 8222185 .. 8226750 (-)
RNA-Seq Expression	Lsi06G006000
Synteny	Lsi06G006000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTCCCACTAAGATAAACTACAAATCAAATCTTCATATGGGCTTTAAATTTTCCTTTTTCCTTTTTGAGTTGCACTCAAATTTTCATAGTTGAAATTTACCCATCAAACAACCAACAATCTTCAAATTCAACAAAACCAGGCCAAGATTTGACCTTCCACCCTTTGATGCAAAATCCTTACCGCTCGAACTTCCATTAAATTCTTATATAAACCACCATCACTCTCACTTCTCAATTCACTCTCTTCTCCACTCCCAATCACCTGACTTGCCTCCCAATCACCTGACTTGCCTCCTACTCCACCGCCAGGTTCCGCCCTCTCCCGCCGGAACCCGCCCCATTTTGCCCTGTATCGCCGGAACCTCTCCGGTAAGTTTCAATTCTTCAGATCTGATTACCGCATTTGATTACTTGCTTGTATTAGATGTGGAAATTTTCATATCGGTGTTTTTTCGAACTGGGTTTTGCTTTATTGTCATATTCTTGCAACAAAATGTCATGAATCTGTTATTTGATCGGGTTTTTTGGAAATCGTTCTAGCTTTATGGTTATATTCTGGCACTGAAATGTCATGAATCTGTGATTTGGTTGAATTTCACTTCCGATCCAATGTTTATGATGATATTGACATGTATTCATTCAATGCAGAGGAGTTGTGTTTCGATTTCTTACTGATCTCATCTTGTTGATCTTGAATTTTTAATACTTGTGCGTGTGTGTTGTCTAATTTCGATACCAATTTAACTATGTGCTTAACTTCAGAGTGTTCTTGCGAGCAGTGAGAAGATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGAGGAACATGGCATAGATCCGACTGGTCGATACACTGGAACCTCTGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGGCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACGGGTCCTTATGGACAAATCTTCAGGCCTGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCCAAGGGGCATTACACCGAAGGAGCAGAACTCATTGATGCTGTCCTTGACGTCGTGAGAAAGGAAGCCGAGAATTGTGATTGCCTTCAAGGTATAATCTATGTCTCAAATCATGTGTTTGATTAGATGTGATTGCTTGGATCTAATGAGAAGTGTTTAAGTTGAGGCCTTTAGATTTACAATTAGTCGTTTTGCTAATGTACCCTTTACTTTTATTTTTGGATGTTCATGTGGGATGAGATTTTAAGACATGATTGAGAGTGTCAAACAATGGATCCAATATCAAAATGCCTTTTTACTCCCACGTGCCTTGCATCTTTGTTTGAGTTATATACTTATAGTATAAAATATTATTAAACTCATTCAAATACTATGGTCTCTTCAATGAAACAACTTCCAAAAGTGCCAAAAAGTATGTTAACGTCTTCTTTTGCTACTTTACCTTTTGCTTTAATACTGTTTTCAAAAAAGTGTACTTGGGTATGTGTCCAAGTGTTAAGCACTTCTGAGCACATCTTCTTCATGGCCTTGCTTTGTTGTAAGGAAAGGTCAAGCCAAAGTCAACGAGGTCCATAGTTATTAATTAATTAATTAATTTGGTACACAAGAAGACGAATTTTTCTTCATTTTCTTACATCTAAGATCTGAAAACTTGTTCTTCTTTATTGATGAGAAGTCACTACATAATCAGGTCTTTCACGATAAGTCACTTTCTTGGTCGGCTCGTTTGGATTCTACTAGTCTTCTTGTATCCACTTGGTGTTCTCTATTCAAGGCTTTTTCAAATTATTCTATTTAGAATATTAGTTTGAATTGGAACACTTTTATTTATTCGGTTTAAGCTTTTTGTATCTTATTTCTTATCATGTTTTTTTACATTTTGAGCCATAGACTCTTTTCATTATATCAATGAAAGGTATTCTTTGGATTATTTCATTCATCAATAAAATATTTCTTATTCCAGAAAATTATATCAATGAAAGGTCATGTTTCCTTTCAGAAAACAAAAAAGAAAAAAAAAGATGGGAAGTCACTACAAATCGATACCTGTTTTCTTTATGTCATTTGTTTTTGTCTCAACTTTATTGAGAAGTCATAGCTTGCGTTTTGCGCCATTCATACTCGAGAATTTCTGTTACATAGAAAATATTACAGTTTCTTATCATGGGATTTCTGATTCATTAAGTGTTTTTAACTCAGTTTGGTTGCTTGGCATTTTTTTTGTGTCCTCACAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTTTGATATCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTTACTTTCTCTGTCTTCCCTTCGCCAAAAGTGTCGGATACAGTTGTAGAACCGTACAATGCTACACTTTCCGTTCACCAGCTCGTTGAGAATGCAGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTTAAGTTAACTACTCCTAGCTGTAAGTAAGGAGTTGATTCAGTATTTCAACCCGCTCTTATCTAAGTTGATGATTTAAGCCATGTTTGATAACGATTTCATTTTTCGTTTTCTGTTTTTGAAATTTATGTTTGTTTCCTTCCAAATTTTCAATTACGGTTTTCATTTTTGTTAAATAAACACTTGAGTTTTAGTCAAACATCTAAAAAAACACACTTGTTTTCTAAAACTATTTCTTTTAGTTTTCAAAATTTGGCTTGGTTTTTGAAAATATTCGTAGACTATGTATAACAAAACATAGAAACTTATGAATGAAAATAGTGTTTATAAGTTTAATTTTTAAAATCCAACACGAAAAATCAAATGGGGCCTTAGTTATTAAAATTCATGAAGACACATACCAATTGAAGTCAATCTTATAATGGCCATTCTAAGATGATGAAAGTATCTCCAATGTTTTTAGGTTCCCCTGTGAAAATTTAACTTCCTAACCTCTAAATTTAACTGCAAATAGATAACTTTATCTGTCATTCTATAATGTCCAATAATCTTACCTGAAACTTCAGATTAGAGCTGCACCTTATTTTACAATATACACTGGAACTTTCTGCTCCATTATATTTTTTCTCTTTCAAATAGAGATTTGCAAATGGCTACATGTTAAATGAGTTGTAAGATATGTCCATTAATTAAAAAATATGTTATTAATGTATCAAGCATTGCCAATAAAACTTCTCACAGCTCTTAGCAAAGCACAGGGCTATGCTTCATTTCACTCCTACGTACCCTTGAAAAGTGGTAACTAAATCTGTTTTGTTTTTGACTTCTTTGCTCTTGAAACAGTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACCTGCTGTCTCAGATTTCCTGGCCAGCTTAACTCCGACCTCAGAAAACTTGCTGTCAATCTAATTCCCTTCCCTCGTTTACACTTCTTCATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGGCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTGGAGTGGATTCCAAACAATGTTAAATCCAGCGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACAGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGATGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAGGATGCCACAGCTGATGAGGAGTATTACGACGAGGAAGAGGAAGACCCTGAACAGGAGTAACTTCACTTACCTGTGAGTAATCTATAGTGTATGATGCCTGCCTATATATATATCTCCCTCTCTCTCTATATATATATGTGGTATTAGTGTTTAGCACAATTTCTGTGCTTCCTGTGGGTGTTTCCCTTTTTTCTTCTCATGTGTTGTTTCAGTATGCTGTTTTATTTGTAATGTTAGAGTTATCCCATCTTCACATTGTAGTTGAAGTTGTCAAGTAATGGGGAGAAATGAGGAGTATTTGTGTTTGTATGAGTTTTCACTTCAGGATTATCGATTGATTGTTTCACGATTACGTGCTTCATTCTTCAAGATTATGGTCTCAGCTTATTTTAAACTAACCACGAAACGAATTTTCATAGGGTTATAACTCTCACACTATAACCAAAACTCTTACAAAGGGGCAGAGCTATCGAGGAGGCTGGTAATTGCTCCCTTCTTAGCTTGTCTTAGGTTATATCGCTAAACTAGCCTATG

mRNA sequence

AATTTTCCCACTAAGATAAACTACAAATCAAATCTTCATATGGGCTTTAAATTTTCCTTTTTCCTTTTTGAGTTGCACTCAAATTTTCATAGTTGAAATTTACCCATCAAACAACCAACAATCTTCAAATTCAACAAAACCAGGCCAAGATTTGACCTTCCACCCTTTGATGCAAAATCCTTACCGCTCGAACTTCCATTAAATTCTTATATAAACCACCATCACTCTCACTTCTCAATTCACTCTCTTCTCCACTCCCAATCACCTGACTTGCCTCCCAATCACCTGACTTGCCTCCTACTCCACCGCCAGGTTCCGCCCTCTCCCGCCGGAACCCGCCCCATTTTGCCCTGTATCGCCGGAACCTCTCCGAGTGTTCTTGCGAGCAGTGAGAAGATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGAGGAACATGGCATAGATCCGACTGGTCGATACACTGGAACCTCTGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGGCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACGGGTCCTTATGGACAAATCTTCAGGCCTGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCCAAGGGGCATTACACCGAAGGAGCAGAACTCATTGATGCTGTCCTTGACGTCGTGAGAAAGGAAGCCGAGAATTGTGATTGCCTTCAAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTTTGATATCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTTACTTTCTCTGTCTTCCCTTCGCCAAAAGTGTCGGATACAGTTGTAGAACCGTACAATGCTACACTTTCCGTTCACCAGCTCGTTGAGAATGCAGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTTAAGTTAACTACTCCTAGCTTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACCTGCTGTCTCAGATTTCCTGGCCAGCTTAACTCCGACCTCAGAAAACTTGCTGTCAATCTAATTCCCTTCCCTCGTTTACACTTCTTCATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGGCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTGGAGTGGATTCCAAACAATGTTAAATCCAGCGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACAGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGATGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAGGATGCCACAGCTGATGAGGAGTATTACGACGAGGAAGAGGAAGACCCTGAACAGGAGTAACTTCACTTACCTGGTTATAACTCTCACACTATAACCAAAACTCTTACAAAGGGGCAGAGCTATCGAGGAGGCTGGTAATTGCTCCCTTCTTAGCTTGTCTTAGGTTATATCGCTAAACTAGCCTATG

Coding sequence (CDS)

ATGAGGGAGATTCTCCACGTTCAAGGAGGTCAGTGTGGTAACCAGATCGGATCCAAGTTTTGGGAAGTTTTGTGTGAGGAACATGGCATAGATCCGACTGGTCGATACACTGGAACCTCTGATTTGCAACTTGAACGTGTAAATGTGTACTACAATGAGGCTTCTTGCGGGCGTTATGTCCCTCGAGCCGTGCTCATGGATCTCGAGCCTGGTACCATGGACAGTGTGAGGACGGGTCCTTATGGACAAATCTTCAGGCCTGATAATTTCGTTTTTGGGCAATCTGGTGCTGGTAATAACTGGGCCAAGGGGCATTACACCGAAGGAGCAGAACTCATTGATGCTGTCCTTGACGTCGTGAGAAAGGAAGCCGAGAATTGTGATTGCCTTCAAGGTTTCCAAGTGTGCCATTCACTTGGTGGAGGCACTGGTTCTGGAATGGGGACTCTTTTGATATCCAAAATCAGAGAAGAATATCCGGACAGGATGTTGCTTACTTTCTCTGTCTTCCCTTCGCCAAAAGTGTCGGATACAGTTGTAGAACCGTACAATGCTACACTTTCCGTTCACCAGCTCGTTGAGAATGCAGATGAGTGCATGGTGCTGGACAATGAAGCATTATATGATATTTGCTTCAGGACTCTTAAGTTAACTACTCCTAGCTTTGGGGATCTCAACCATTTAATTTCTGCTACAATGAGTGGGGTGACCTGCTGTCTCAGATTTCCTGGCCAGCTTAACTCCGACCTCAGAAAACTTGCTGTCAATCTAATTCCCTTCCCTCGTTTACACTTCTTCATGGTCGGATTTGCTCCTCTTACTTCACGTGGGTCACAGCTATATAGGGCGCTGACCGTCCCAGAGTTGACACAGCAAATGTGGGATTCTAAAAACATGATGTGCGCTGCAGATCCACGGCATGGCCGATACCTCACTGCCTCTGCCATGTTCAGGGGCAAGATGAGTACTAAAGAAGTTGATGAACAAATGATCAATGTTCAGAACAAGAATTCCTCATACTTCGTGGAGTGGATTCCAAACAATGTTAAATCCAGCGTTTGTGACATTGCTCCTAAAGGACTTTCCATGGCATCGACCTTCATCGGAAACTCAACCTCCATTCAGGAAATGTTCAGGCGTGTGAGCGAGCAGTTCACAGCCATGTTCAGGAGGAAGGCTTTCTTGCACTGGTACACTGGAGAAGGAATGGATGAAATGGAGTTCACTGAAGCAGAAAGCAACATGAACGATCTCGTTTCCGAGTATCAGCAGTACCAGGATGCCACAGCTGATGAGGAGTATTACGACGAGGAAGAGGAAGACCCTGAACAGGAGTAA

Protein sequence

MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATADEEYYDEEEEDPEQE

Homology

[Close]

BLAST of Lsi06G006000 vs. ExPASy Swiss-Prot
Match: P29514 (Tubulin beta-6 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 2.0e-255
Identity = 428/444 (96.40%), Postives = 437/444 (98.42%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY G SDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRA+LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQ 445
           EYQQYQDATAD+E   EE+ED E+
Sbjct: 421 EYQQYQDATADDEGEYEEDEDEEE 444

[Close]

BLAST of Lsi06G006000 vs. ExPASy Swiss-Prot
Match: Q41783 (Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 2.0e-255
Identity = 425/440 (96.59%), Postives = 436/440 (99.09%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C+EHGIDPTGRYTG SDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEE 441
           EYQQYQDATADEE Y++EEE
Sbjct: 421 EYQQYQDATADEEEYEDEEE 440

[Close]

BLAST of Lsi06G006000 vs. ExPASy Swiss-Prot
Match: Q43594 (Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2)

HSP 1 Score: 882.1 bits (2278), Expect = 2.6e-255
Identity = 430/447 (96.20%), Postives = 439/447 (98.21%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYDEEEEDPEQE 446
           EYQQYQDATADEE  Y DEEE+ PE E
Sbjct: 421 EYQQYQDATADEEGDYEDEEEQVPEDE 447

[Close]

BLAST of Lsi06G006000 vs. ExPASy Swiss-Prot
Match: Q9ZRB2 (Tubulin beta-1 chain OS=Triticum aestivum OX=4565 GN=TUBB1 PE=2 SV=1)

HSP 1 Score: 881.7 bits (2277), Expect = 3.4e-255
Identity = 429/445 (96.40%), Postives = 438/445 (98.43%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ+YR LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQMYRPLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATADEE   EEEE+ EQE
Sbjct: 421 EYQQYQDATADEEGEYEEEEELEQE 445

[Close]

BLAST of Lsi06G006000 vs. ExPASy Swiss-Prot
Match: Q9ZPN7 (Tubulin beta-4 chain OS=Eleusine indica OX=29674 GN=TUBB4 PE=2 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 2.2e-254
Identity = 426/441 (96.60%), Postives = 435/441 (98.64%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY GTSDLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDI P+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYDEEE 440
           EYQQYQDATADEE  Y DE+E
Sbjct: 421 EYQQYQDATADEEGDYEDEDE 441

[Close]

BLAST of Lsi06G006000 vs. ExPASy TrEMBL
Match: A0A6J1JC64 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111485455 PE=3 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.3e-257
Identity = 440/446 (98.65%), Postives = 443/446 (99.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATAD-EEYYDEEEEDPEQE 446
           EYQQYQDATAD EEYYDEE+E+ E E
Sbjct: 421 EYQQYQDATADEEEYYDEEDEEAEHE 446

[Close]

BLAST of Lsi06G006000 vs. ExPASy TrEMBL
Match: A0A6J1HAW4 (Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111461710 PE=3 SV=1)

HSP 1 Score: 898.3 bits (2320), Expect = 1.3e-257
Identity = 440/446 (98.65%), Postives = 443/446 (99.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATAD-EEYYDEEEEDPEQE 446
           EYQQYQDATAD EEYYDEE+E+ E E
Sbjct: 421 EYQQYQDATADEEEYYDEEDEEAEHE 446

[Close]

BLAST of Lsi06G006000 vs. ExPASy TrEMBL
Match: A0A6J1EBG3 (Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111432620 PE=3 SV=1)

HSP 1 Score: 896.3 bits (2315), Expect = 5.0e-257
Identity = 437/445 (98.20%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATAD EYY++EEE+PE E
Sbjct: 421 EYQQYQDATAD-EYYEDEEEEPESE 444

[Close]

BLAST of Lsi06G006000 vs. ExPASy TrEMBL
Match: A0A6J1DIF1 (Tubulin beta chain OS=Momordica charantia OX=3673 GN=LOC111020797 PE=3 SV=1)

HSP 1 Score: 894.8 bits (2311), Expect = 1.5e-256
Identity = 436/445 (97.98%), Postives = 442/445 (99.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RF GQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFAGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L+MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LTMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATA+E YY+EEEE+ E+E
Sbjct: 421 EYQQYQDATAEEGYYEEEEEEEEEE 445

[Close]

BLAST of Lsi06G006000 vs. ExPASy TrEMBL
Match: A0A6J1IAD3 (Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111472687 PE=3 SV=1)

HSP 1 Score: 894.4 bits (2310), Expect = 1.9e-256
Identity = 437/445 (98.20%), Postives = 442/445 (99.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTS GSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSCGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATAD EYY++EEE+PE E
Sbjct: 421 EYQQYQDATAD-EYYEDEEEEPESE 444

[Close]

BLAST of Lsi06G006000 vs. NCBI nr
Match: XP_038880213.1 (tubulin beta-6 chain [Benincasa hispida] >XP_038880214.1 tubulin beta-6 chain [Benincasa hispida])

HSP 1 Score: 906.7 bits (2342), Expect = 7.6e-260
Identity = 441/445 (99.10%), Postives = 445/445 (100.00%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATADEEYY+EE++DPEQE
Sbjct: 421 EYQQYQDATADEEYYEEEDDDPEQE 445

[Close]

BLAST of Lsi06G006000 vs. NCBI nr
Match: XP_022961097.1 (tubulin beta-6 chain [Cucurbita moschata] >XP_022961098.1 tubulin beta-6 chain [Cucurbita moschata] >XP_022988111.1 tubulin beta-6 chain [Cucurbita maxima] >XP_022988112.1 tubulin beta-6 chain [Cucurbita maxima] >XP_023516484.1 tubulin beta-6 chain [Cucurbita pepo subsp. pepo])

HSP 1 Score: 898.3 bits (2320), Expect = 2.7e-257
Identity = 440/446 (98.65%), Postives = 443/446 (99.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATAD-EEYYDEEEEDPEQE 446
           EYQQYQDATAD EEYYDEE+E+ E E
Sbjct: 421 EYQQYQDATADEEEYYDEEDEEAEHE 446

[Close]

BLAST of Lsi06G006000 vs. NCBI nr
Match: KAG6590152.1 (Tubulin beta-6 chain, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 898.3 bits (2320), Expect = 2.7e-257
Identity = 440/446 (98.65%), Postives = 443/446 (99.33%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 31  MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 90

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 91  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 150

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 151 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 210

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 211 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 270

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 271 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 330

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 331 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 390

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 391 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 450

Query: 421 EYQQYQDATAD-EEYYDEEEEDPEQE 446
           EYQQYQDATAD EEYYDEE+E+ E E
Sbjct: 451 EYQQYQDATADEEEYYDEEDEEAEHE 476

[Close]

BLAST of Lsi06G006000 vs. NCBI nr
Match: XP_023531566.1 (tubulin beta-6 chain-like [Cucurbita pepo subsp. pepo] >XP_023531567.1 tubulin beta-6 chain-like [Cucurbita pepo subsp. pepo] >KAG6588230.1 Tubulin beta-6 chain, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 897.5 bits (2318), Expect = 4.6e-257
Identity = 438/445 (98.43%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATAD EYY++EEE+PE E
Sbjct: 421 EYQQYQDATAD-EYYEDEEEEPESE 444

[Close]

BLAST of Lsi06G006000 vs. NCBI nr
Match: XP_022925330.1 (tubulin beta-6 chain-like [Cucurbita moschata] >XP_022925337.1 tubulin beta-6 chain-like [Cucurbita moschata])

HSP 1 Score: 896.3 bits (2315), Expect = 1.0e-256
Identity = 437/445 (98.20%), Postives = 443/445 (99.55%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILHVQGGQCGNQIGSKFWEVLC+EHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHVQGGQCGNQIGSKFWEVLCDEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQE 446
           EYQQYQDATAD EYY++EEE+PE E
Sbjct: 421 EYQQYQDATAD-EYYEDEEEEPESE 444

[Close]

BLAST of Lsi06G006000 vs. TAIR 10
Match: AT5G12250.1 (beta-6 tubulin )

HSP 1 Score: 882.5 bits (2279), Expect = 1.4e-256
Identity = 428/444 (96.40%), Postives = 437/444 (98.42%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIGSKFWEV+C+EHGIDPTGRY G SDLQLERVNVYYNEASCGRYV
Sbjct: 1   MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRA+LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV
Sbjct: 61  PRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAP+G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPRG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEEYYDEEEEDPEQ 445
           EYQQYQDATAD+E   EE+ED E+
Sbjct: 421 EYQQYQDATADDEGEYEEDEDEEE 444

[Close]

BLAST of Lsi06G006000 vs. TAIR 10
Match: AT5G62690.1 (tubulin beta chain 2 )

HSP 1 Score: 867.1 bits (2239), Expect = 6.2e-252
Identity = 421/447 (94.18%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTGRYTG SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDS+R+GPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYDEEEEDPEQE 446
           EYQQYQDATADEE  Y DEEE + +QE
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]

BLAST of Lsi06G006000 vs. TAIR 10
Match: AT5G62700.1 (tubulin beta chain 3 )

HSP 1 Score: 867.1 bits (2239), Expect = 6.2e-252
Identity = 421/447 (94.18%), Postives = 435/447 (97.32%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGIDPTGRYTG SDLQLER+NVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDS+R+GPYGQ FRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YR+LTVPELTQQMWDSKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE--YYDEEEEDPEQE 446
           EYQQYQDATADEE  Y DEEE + +QE
Sbjct: 421 EYQQYQDATADEEGDYEDEEEGEYQQE 447

[Close]

BLAST of Lsi06G006000 vs. TAIR 10
Match: AT5G23860.1 (tubulin beta 8 )

HSP 1 Score: 860.9 bits (2223), Expect = 4.5e-250
Identity = 419/448 (93.53%), Postives = 434/448 (96.88%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TGRY G +DLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE---YYDEEEEDPEQE 446
           EYQQYQDATADEE    Y+E+E + ++E
Sbjct: 421 EYQQYQDATADEEEGYEYEEDEVEVQEE 448

[Close]

BLAST of Lsi06G006000 vs. TAIR 10
Match: AT5G23860.2 (tubulin beta 8 )

HSP 1 Score: 860.9 bits (2223), Expect = 4.5e-250
Identity = 419/448 (93.53%), Postives = 434/448 (96.88%), Query Frame = 0


Query: 1   MREILHVQGGQCGNQIGSKFWEVLCEEHGIDPTGRYTGTSDLQLERVNVYYNEASCGRYV 60
           MREILH+QGGQCGNQIG+KFWEV+C EHGID TGRY G +DLQLERVNVYYNEASCGR+V
Sbjct: 1   MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60

Query: 61  PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
           PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61  PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120

Query: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMLLTFSVFPSPKVSDTVV 180
           RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRM+LTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180

Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
           EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240

Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQLYRALTVPELTQQMWDSKNMM 300
           RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQ YRALTVPELTQQMWD+KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300

Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIAPKG 360
           CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKS+VCDI P G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPTG 360

Query: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
           L MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420

Query: 421 EYQQYQDATADEE---YYDEEEEDPEQE 446
           EYQQYQDATADEE    Y+E+E + ++E
Sbjct: 421 EYQQYQDATADEEEGYEYEEDEVEVQEE 448

The following BLAST results are available for this feature:

BLAST of Lsi06G006000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P29514	2.0e-255	96.40	Tubulin beta-6 chain OS=Arabidopsis thaliana OX=3702 GN=TUBB6 PE=2 SV=1	[more]
Q41783	2.0e-255	96.59	Tubulin beta-6 chain OS=Zea mays OX=4577 GN=TUBB6 PE=2 SV=1	[more]
Q43594	2.6e-255	96.20	Tubulin beta-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBB1 PE=2 SV=2	[more]
Q9ZRB2	3.4e-255	96.40	Tubulin beta-1 chain OS=Triticum aestivum OX=4565 GN=TUBB1 PE=2 SV=1	[more]
Q9ZPN7	2.2e-254	96.60	Tubulin beta-4 chain OS=Eleusine indica OX=29674 GN=TUBB4 PE=2 SV=1	[more]

BLAST of Lsi06G006000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JC64	1.3e-257	98.65	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111485455 PE=3 SV=1	[more]
A0A6J1HAW4	1.3e-257	98.65	Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111461710 PE=3 SV=1	[more]
A0A6J1EBG3	5.0e-257	98.20	Tubulin beta chain OS=Cucurbita moschata OX=3662 GN=LOC111432620 PE=3 SV=1	[more]
A0A6J1DIF1	1.5e-256	97.98	Tubulin beta chain OS=Momordica charantia OX=3673 GN=LOC111020797 PE=3 SV=1	[more]
A0A6J1IAD3	1.9e-256	98.20	Tubulin beta chain OS=Cucurbita maxima OX=3661 GN=LOC111472687 PE=3 SV=1	[more]

BLAST of Lsi06G006000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880213.1	7.6e-260	99.10	tubulin beta-6 chain [Benincasa hispida] >XP_038880214.1 tubulin beta-6 chain [B...	[more]
XP_022961097.1	2.7e-257	98.65	tubulin beta-6 chain [Cucurbita moschata] >XP_022961098.1 tubulin beta-6 chain [...	[more]
KAG6590152.1	2.7e-257	98.65	Tubulin beta-6 chain, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023531566.1	4.6e-257	98.43	tubulin beta-6 chain-like [Cucurbita pepo subsp. pepo] >XP_023531567.1 tubulin b...	[more]
XP_022925330.1	1.0e-256	98.20	tubulin beta-6 chain-like [Cucurbita moschata] >XP_022925337.1 tubulin beta-6 ch...	[more]

BLAST of Lsi06G006000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12250.1	1.4e-256	96.40	beta-6 tubulin	[more]
AT5G62690.1	6.2e-252	94.18	tubulin beta chain 2	[more]
AT5G62700.1	6.2e-252	94.18	tubulin beta chain 3	[more]
AT5G23860.1	4.5e-250	93.53	tubulin beta 8	[more]
AT5G23860.2	4.5e-250	93.53	tubulin beta 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 408..428
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 430..445
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 420..445
None	No IPR available	PANTHER	PTHR11588:SF106	TUBULIN BETA-6 CHAIN	coord: 1..442
None	No IPR available	CDD	cd02187	beta_tubulin	coord: 2..426 e-value: 0.0 score: 873.814
IPR002453	Beta tubulin	PRINTS	PR01163	BETATUBULIN	coord: 265..281 score: 82.55 coord: 412..430 score: 93.14 coord: 212..224 score: 80.48 coord: 329..343 score: 87.09 coord: 245..258 score: 88.61 coord: 347..370 score: 72.62 coord: 41..58 score: 75.84 coord: 230..239 score: 82.17 coord: 88..99 score: 94.76 coord: 108..126 score: 84.57 coord: 311..329 score: 80.51 coord: 377..388 score: 79.05 coord: 152..164 score: 84.4
IPR000217	Tubulin	PRINTS	PR01161	TUBULIN	coord: 10..30 score: 70.21 coord: 132..150 score: 79.04 coord: 93..104 score: 76.26 coord: 151..172 score: 57.51 coord: 190..210 score: 67.82 coord: 176..189 score: 79.11 coord: 370..398 score: 65.34 coord: 51..70 score: 66.6 coord: 106..130 score: 68.98
IPR000217	Tubulin	PANTHER	PTHR11588	TUBULIN	coord: 1..442
IPR003008	Tubulin/FtsZ, GTPase domain	SMART	SM00864	Tubulin_4	coord: 47..244 e-value: 1.8E-70 score: 250.1
IPR003008	Tubulin/FtsZ, GTPase domain	PFAM	PF00091	Tubulin	coord: 3..211 e-value: 2.1E-70 score: 236.9
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	SMART	SM00865	Tubulin_C_4	coord: 246..383 e-value: 2.6E-39 score: 146.6
IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	PFAM	PF03953	Tubulin_C	coord: 261..382 e-value: 7.0E-38 score: 129.6
IPR023123	Tubulin, C-terminal	GENE3D	1.10.287.600	Helix hairpin bin	coord: 374..430 e-value: 2.2E-35 score: 122.2
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	GENE3D	3.40.50.1440	Tubulin/FtsZ, GTPase domain	coord: 1..262 e-value: 1.0E-131 score: 440.2
IPR036525	Tubulin/FtsZ, GTPase domain superfamily	SUPERFAMILY	52490	Tubulin nucleotide-binding domain-like	coord: 1..243
IPR037103	Tubulin/FtsZ-like, C-terminal domain	GENE3D	3.30.1330.20		coord: 263..373 e-value: 1.9E-39 score: 136.4
IPR017975	Tubulin, conserved site	PROSITE	PS00227	TUBULIN	coord: 140..146
IPR013838	Beta tubulin, autoregulation binding site	PROSITE	PS00228	TUBULIN_B_AUTOREG	coord: 1..4
IPR008280	Tubulin/FtsZ, C-terminal	SUPERFAMILY	55307	Tubulin C-terminal domain-like	coord: 244..429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G006000.1	Lsi06G006000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000226	microtubule cytoskeleton organization
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0009409	response to cold
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005874	microtubule
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005200	structural constituent of cytoskeleton