Lsi06G005690 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G005690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMitochondrial fission 1 protein
Locationchr06: 7412806 .. 7417010 (+)
RNA-Seq ExpressionLsi06G005690
SyntenyLsi06G005690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAATTGAATCAGTGTTTTCAAATTTCCTACCAAACACGCGCTAAATATTTATCTAAAAAATATCAGGGTAAAACGTGTGAAACAAAACGTTAGTGTAAGTCTTTAGCTAGTGGTTTCCGTAAAAGCGGAAAAATAAAAAAGAAACAAAACAGGGTTCCGCGTTACTTGAAATAGCGACAACGCAGAAGAAGATTAGCAGAGAAAAATGGAAGCAAAAGTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGTATGTTTATTCTCTCTCTCTCCTCTTCTTTTAGTTGCTTGATTTCTTCTGTTGTCTAGATTCCGGTTTGTTTTCGAAATCAGGTTGTTGGGTCTCTAATGAGCTATGTTTTTTAGTGTATTTGATTGAATTTTGGGTGTTTGTGTGAATCCTTTGCGTTTGTATTGTAAAACAGTGTTCTAATTCTTATTGTAATTACTGTTAATTCTTCCAGTTAATTGATTTTGGGTGTTTGTATGGAGTGATTTAATTGCATTTTGTGGCTGTGCGGACTTTAAACTTGAAATTTCCCCCTTTCAACTTGTTCATCTTTGTCCTGATATTTCCAATTTTAACGAAACTCATGGCCTTCTTGTTTTAGGGCATGTGTTTTTTTATTATTTATTTTTTCTTAAGTCGCAAGATTGAACATCATTAACTAAATTTTAATGAATGTTTCCCCCATGTCTCTTGTCGGTATTACTGAAATTATTGCTTTGACTAATCTTTGCCTTCATTTAAATCACGGGCCAGGCCATTGTCATGGAATTTCAGCACGTCATGCTTAATGGGAACCATTAGTTTTACTTGGTTCTTTAGCTGATGGCCTGTTTGTGAGACTTTAATCATTTTCAAAATCACTCAAGAATTTCTTTTAAATTCAAAATCAATTTTAATAGGATGAAAAATGTGTTTAAAAGTGTAAAATTAAATATTAAATTGATTTTGAGGGATTAAAAGTGTGTTTCAAAGTGATTTTAAATACGATAAATGTGGTTTTAACCATTTTAAAGTCATTGGCTAACATTCACTAAGACTATTGAATACCTATTTTGTTTTGCCCATCAGGAGGGAGTTGAGGCTAGATTTTCTATCCCTGCATTTTCTTGCTTCTTGATAGCTATCTCCATGTCCTTTTTTTTCTCTCTTTCTGTATCAGGCTACTAGAAGGCAGATGCAAGCACAACAGTTGATGCACATGCACCAATAAATAGTGTCTACTGAAATTTGTTATATTATGCTTAATCTAACTCAAATATCCATACTCATTAAAAGAAAAAGAAATATATGTGTGTGTGTATATATATATATATATGTCTATCCTGAAAATTCTATGTCTGTTTGTAAATCAGATTAAAGGATTGTTTTGGGTTTTAGAATTAAAAAAGAGCTTTTTATGACAAATACTTATTTGTGGCAGAAAACTGAAAGTTGTTTGTTTTCACATTGTTTTATGTTGTTTCGATTAGTTATTGTATATTTATTAAGTATAGCTTGTTTTGAATGTGTTATATATCAATTTTAATAGGTTAAAGAAGTAAATGAATATACAATAAAAGAAAATATCTTTCCAAACAGTTTGCCATCGGTCCATCGCTGTTATAAAATCATTGGAGCCATAGATCCTTGTTTTTCTCCATGGCTCAGTCATACCTTTCCCTACATTGTCTAGTTACAAAGTAGAAGTTCAAACTTCTTGTTGCGACTGCATAATATTGTTAGTCTTTATTTTAATAATGTCATCTCTCATAATCTCATATTATTCTTTGAATGGCACCCATTTTTAAGTTGATATGGTGATGCATTGCAGGGTTGTGAAAGAGAGGCTGCTGATGCCGAAAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCGCAATGCTTGAAGGTGAAGTATTTCAAGGAATTAGACATCCTTTTTTTATTATTATTATTTTCTTATAACTTTGAGTTTCCAAAATGCTTTCAAAGTGCCAGTGTGAACCTATAGTTAGCTATTTGCTTGTCTGATACTCTTCAACGTTTTTTCTCCCTTTTCTGTCATTTTGTTATTATGCAGCTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAGTCGGGAACTTGTAGAACAATGCTTAACGGTATGATTCTATCTGTGGCTTGGATTTCTATGTATAGTGAATAACCATTAACTTGGGCCGCGATTAGTAACAGTTAGGCTCCATTTAGTAACCAATTTTTTTTTTGTTTTTTTTTTTGAAAATTAAGCCTATTTTCTCTCAATTTCTTGCAATGATGATTTGCATCTTTCTTAAGTAAAATAGTTGAATTCTTAGCAAAATTCCAAAAACAAAAACAAGTTTTTAAAAACTACTTTTTTTAGTTTTCAAAATTTGGCTTGGTTTTTTAAAACATTGGTAAAAAGTAGATAACAGAGTAAGAAATTTAGTGGTGGAAGGAGTGCTGCTTAATTTTTAAAAACCAAAAACCAAATGGTTACCAAACGGGGCCTTAGGTTTTGGGTTTTTAGTTTTTTAGTTATTGAAAATTAAGCCTATAAACACCCGTTCGATATTTCTTGCTTTATTATCTATTTTCTACCAATGTTTTCAAAAACAAAGCCAAGTTTTGAAAACTAAAAGAATAGTTTCTAAAAACTTGTTTTTGTTTTTGGAATTTAGCTAAGAATTCAACTCTTCTACTCAAGAAAGATGAGAACCATTTTAAGAAATTGAGAGGAAGTAGACTTAATTTTCAATAAGCAAATGGTTACCAAATGGGAACTTAATGTCTTGAGTTTTTTTTCTCGTGCATCTCAAGCTTGATACTTGATGCTACAATGCAGGAAGACATAATTTGGCCTTGTGTTAGGATACTTCCTAACTAGAATAAGATCTGAATATATTGAAATGTAAAGATGAAGAAATACAAGATAAACCAAGTTCAAGGTACTTGGAAACCGCCCTCTTGGGCATTCTAACTCAAGCCTTAACCACTCAACTAATGCCTACCTTCACTCACTCATCCTCTCTCTATTTATAACAAGAATCAGTAACTAACTTCCTATCTAATTACCCTTATACTCCTTACTAATACCATACCAATATACTTATCTAGGTACCTAACACCTTGATACATATCTGACCCCCTAATATGTGCCACTTCTTTTTCGTAAACTTTCGATGTGGTTGACATGTGTTAATATATGATTGTGACATGTGGGGGAACACATCTAGATTGTTTTATGAATTTAATAACCAAAATGAGAGATACATACAACATTCCATAAAATTGGAACTCTCAGAAACAGAATGTGGCACTTCTTTATGAAACCACTGATGATTGAATTTTAGAACTTTGGAGCTCAACCATTTTGATGTTTGATTCTCAGATTGCTCCCGACTGGAGACAGGCAATGACACTGAAGAAATCAATCGAAGACCGGATCACTAAAGGTATCGATTTCTCCCATACTTTTTTTTTTTTTTTTCTTTTTTGACAATGTGTGGGGTGGAAGAATCAAATCTTTGACTTTGAAGTTGATAGTACAAGCATTATGCCAATTGAGCTAATGACATTTCTCCCAGACTTCTAATCTTTCCTTATCCCAATTTAACCAAAAATTCATTGAAAATGATCAATTTAATTCATTATCACTCTTGCTTGGGGAATGTAGATGGTGTGATTGGCATCGGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGAGTTAATTACTTGCTTTGTATATAAGAGATGGTCTGATCAAATCCTGTTTTAGAGTTGCTATACTTAAAAAGCTTAATATGTACAATGCGATTTAGCTATTAACAATGTTTGTTCTGTTATATTGATCTATTTTACATTGTAAAAATACGATGTTATGTACTTTGTCCTGCATTGGTAGTTTATTTGAGATTGTCCAAATTCTTTCTAATTGATTTTGGGGAGTTGAGCAAAAGCATTACGAAAACTTTGGGGAAAAATTATTCAAAATGACC

mRNA sequence

AGAAAATTGAATCAGTGTTTTCAAATTTCCTACCAAACACGCGCTAAATATTTATCTAAAAAATATCAGGGTAAAACGTGTGAAACAAAACGTTAGTGTAAGTCTTTAGCTAGTGGTTTCCGTAAAAGCGGAAAAATAAAAAAGAAACAAAACAGGGTTCCGCGTTACTTGAAATAGCGACAACGCAGAAGAAGATTAGCAGAGAAAAATGGAAGCAAAAGTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGGTTGTGAAAGAGAGGCTGCTGATGCCGAAAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCGCAATGCTTGAAGCTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAATGGTGTGATTGGCATCGGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGAGTTAATTACTTGCTTTGTATATAAGAGATGGTCTGATCAAATCCTGTTTTAGAGTTGCTATACTTAAAAAGCTTAATATGTACAATGCGATTTAGCTATTAACAATGTTTGTTCTGTTATATTGATCTATTTTACATTGTAAAAATACGATGTTATGTACTTTGTCCTGCATTGGTAGTTTATTTGAGATTGTCCAAATTCTTTCTAATTGATTTTGGGGAGTTGAGCAAAAGCATTACGAAAACTTTGGGGAAAAATTATTCAAAATGACC

Coding sequence (CDS)

ATGGAAGCAAAAGTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGGTTGTGAAAGAGAGGCTGCTGATGCCGAAAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCGCAATGCTTGAAGCTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAATGGTGTGATTGGCATCGGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGA

Protein sequence

MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSRNGVIGIGIAATAATAVGLLAGGIAAAVSRKK
Homology
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BLAST of Lsi06G005690 vs. ExPASy Swiss-Prot
Match: Q9M1J1 (Mitochondrial fission 1 protein A OS=Arabidopsis thaliana OX=3702 GN=FIS1A PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.0e-43
Identity = 96/170 (56.47%), Postives = 113/170 (66.47%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           M+AK+ +FF SV  FFSG D IPWCD DVIAGCERE  +A    +++L KE ++RLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+Q EDVQRGIAMLEA+L     PL+ REKLYLLAVGY+RSG+YSR            
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI ATA  AVGL+AGGI AA+SRKK
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRKK 170

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BLAST of Lsi06G005690 vs. ExPASy Swiss-Prot
Match: Q94CK3 (Mitochondrial fission 1 protein B OS=Arabidopsis thaliana OX=3702 GN=FIS1B PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-31
Identity = 83/173 (47.98%), Postives = 106/173 (61.27%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSG-----GDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILR 60
           M+A + K F SVS+FFSG      D  P CD D+I+GCE+E A+A+    +   KE I+R
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQ---DEGRKKECIMR 60

Query: 61  LSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------- 120
           LSWALVHSK P D+QRGIAMLEA +  D + +K+REKLYLLA+GY+RSGD+SR       
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 121 ------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR 138
                                   +GVIG+GI   A TAVG++A GIAAA+ R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGI---AVTAVGVVA-GIAAAILR 166

[Close]
BLAST of Lsi06G005690 vs. ExPASy TrEMBL
Match: A0A6J1JKZ6 (Mitochondrial fission 1 protein OS=Cucurbita maxima OX=3661 GN=LOC111485530 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.0e-58
Identity = 128/170 (75.29%), Postives = 135/170 (79.41%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEKGSSDELLKESI+RLSW+L
Sbjct: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREVADAEKGSSDELLKESIMRLSWSL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLL+VGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAALSGDDSPLKMREKLYLLSVGYFRSGDYSRSRDLVEQCLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGL+AGGIAAAVSRKK
Sbjct: 121 PDWRQARTLKKSIEDKITKDGVIGIGI---AATAVGLIAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. ExPASy TrEMBL
Match: A0A6J1H8P1 (Mitochondrial fission 1 protein OS=Cucurbita moschata OX=3662 GN=LOC111461518 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.0e-58
Identity = 128/170 (75.29%), Postives = 135/170 (79.41%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEKGSSDELLKESI+RLSW+L
Sbjct: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREVADAEKGSSDELLKESIMRLSWSL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLL+VGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAALSGDDSPLKMREKLYLLSVGYFRSGDYSRSRDLVEQCLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGL+AGGIAAAVSRKK
Sbjct: 121 PDWRQARTLKKSIEDKITKDGVIGIGI---AATAVGLIAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. ExPASy TrEMBL
Match: A0A0A0M2W6 (Mitochondrial fission 1 protein OS=Cucumis sativus OX=3659 GN=Csa_1G627410 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 126/170 (74.12%), Postives = 133/170 (78.24%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKF GSVSNFFSGGDHIPWCD DV+AGCEREAA+AEK SSDELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFLGSVSNFFSGGDHIPWCDCDVVAGCEREAAEAEKSSSDELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAA+SGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAAISGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQAMTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. ExPASy TrEMBL
Match: A0A1S3BNG0 (Mitochondrial fission 1 protein OS=Cucumis melo OX=3656 GN=LOC103491990 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.1e-56
Identity = 125/170 (73.53%), Postives = 132/170 (77.65%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKF GSVSNFFSGGDHIPWCDRDV+AGCEREAA+AEK SS ELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFLGSVSNFFSGGDHIPWCDRDVVAGCEREAAEAEKSSSGELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDV RGIAMLEAA+SGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVHRGIAMLEAAISGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQAMTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. ExPASy TrEMBL
Match: A0A6J1D4B4 (Mitochondrial fission 1 protein OS=Momordica charantia OX=3673 GN=LOC111017477 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 7.7e-55
Identity = 121/170 (71.18%), Postives = 131/170 (77.06%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           ME+K+ KFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEK S+DE LKESI+RLSWAL
Sbjct: 1   MESKMGKFFGSVSNFFSGGDHIPWCDRDVIAGCEREVADAEKSSADEQLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAALS DD+PLKMREKLYLL+VGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAALSSDDSPLKMREKLYLLSVGYFRSGDYSRSRELVEQCLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGL+AGGIAAAV+RKK
Sbjct: 121 PDWRQAITLKKSIEDRITKDGVIGIGI---AATAVGLIAGGIAAAVARKK 167

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: XP_022960826.1 (mitochondrial fission 1 protein A-like [Cucurbita moschata] >XP_022988229.1 mitochondrial fission 1 protein A-like [Cucurbita maxima] >XP_023515513.1 mitochondrial fission 1 protein A-like [Cucurbita pepo subsp. pepo] >KAG6590173.1 Mitochondrial fission 1 protein A, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023833.1 Mitochondrial fission 1 protein A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 4.0e-58
Identity = 128/170 (75.29%), Postives = 135/170 (79.41%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEKGSSDELLKESI+RLSW+L
Sbjct: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREVADAEKGSSDELLKESIMRLSWSL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLL+VGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAALSGDDSPLKMREKLYLLSVGYFRSGDYSRSRDLVEQCLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGL+AGGIAAAVSRKK
Sbjct: 121 PDWRQARTLKKSIEDKITKDGVIGIGI---AATAVGLIAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: XP_038878443.1 (mitochondrial fission 1 protein A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 233.0 bits (593), Expect = 1.5e-57
Identity = 129/170 (75.88%), Postives = 134/170 (78.82%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKFF SVS+FFSGGDHIPWCDRDVIA CEREAADAEKGSSDELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFFSSVSSFFSGGDHIPWCDRDVIASCEREAADAEKGSSDELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAALSGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAALSGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQARTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: XP_004139057.1 (mitochondrial fission 1 protein A [Cucumis sativus] >KGN66531.1 hypothetical protein Csa_007302 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 2.2e-56
Identity = 126/170 (74.12%), Postives = 133/170 (78.24%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKF GSVSNFFSGGDHIPWCD DV+AGCEREAA+AEK SSDELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFLGSVSNFFSGGDHIPWCDCDVVAGCEREAAEAEKSSSDELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAA+SGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAAISGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQAMTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: XP_008450362.1 (PREDICTED: mitochondrial fission 1 protein A [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 6.4e-56
Identity = 125/170 (73.53%), Postives = 132/170 (77.65%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKF GSVSNFFSGGDHIPWCDRDV+AGCEREAA+AEK SS ELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFLGSVSNFFSGGDHIPWCDRDVVAGCEREAAEAEKSSSGELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDV RGIAMLEAA+SGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVHRGIAMLEAAISGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQAMTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: XP_022148930.1 (mitochondrial fission 1 protein A-like [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 1.6e-54
Identity = 121/170 (71.18%), Postives = 131/170 (77.06%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           ME+K+ KFFGSVSNFFSGGDHIPWCDRDVIAGCERE ADAEK S+DE LKESI+RLSWAL
Sbjct: 1   MESKMGKFFGSVSNFFSGGDHIPWCDRDVIAGCEREVADAEKSSADEQLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAALS DD+PLKMREKLYLL+VGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAALSSDDSPLKMREKLYLLSVGYFRSGDYSRSRELVEQCLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGL+AGGIAAAV+RKK
Sbjct: 121 PDWRQAITLKKSIEDRITKDGVIGIGI---AATAVGLIAGGIAAAVARKK 167

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BLAST of Lsi06G005690 vs. TAIR 10
Match: AT3G57090.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 3.5e-44
Identity = 96/170 (56.47%), Postives = 113/170 (66.47%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           M+AK+ +FF SV  FFSG D IPWCD DVIAGCERE  +A    +++L KE ++RLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+Q EDVQRGIAMLEA+L     PL+ REKLYLLAVGY+RSG+YSR            
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI ATA  AVGL+AGGI AA+SRKK
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRKK 170

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BLAST of Lsi06G005690 vs. TAIR 10
Match: AT5G12390.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 135.6 bits (340), Expect = 3.1e-32
Identity = 83/173 (47.98%), Postives = 106/173 (61.27%), Query Frame = 0 

Query: 1   MEAKVSKFFGSVSNFFSG-----GDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILR 60
           M+A + K F SVS+FFSG      D  P CD D+I+GCE+E A+A+    +   KE I+R
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQ---DEGRKKECIMR 60

Query: 61  LSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------- 120
           LSWALVHSK P D+QRGIAMLEA +  D + +K+REKLYLLA+GY+RSGD+SR       
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 121 ------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR 138
                                   +GVIG+GI   A TAVG++A GIAAA+ R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGI---AVTAVGVVA-GIAAAILR 166

The following BLAST results are available for this feature:
BLAST of Lsi06G005690 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1J15.0e-4356.47Mitochondrial fission 1 protein A OS=Arabidopsis thaliana OX=3702 GN=FIS1A PE=1 ... [more]
Q94CK34.4e-3147.98Mitochondrial fission 1 protein B OS=Arabidopsis thaliana OX=3702 GN=FIS1B PE=1 ... [more]
BLAST of Lsi06G005690 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JKZ62.0e-5875.29Mitochondrial fission 1 protein OS=Cucurbita maxima OX=3661 GN=LOC111485530 PE=3... [more]
A0A6J1H8P12.0e-5875.29Mitochondrial fission 1 protein OS=Cucurbita moschata OX=3662 GN=LOC111461518 PE... [more]
A0A0A0M2W61.1e-5674.12Mitochondrial fission 1 protein OS=Cucumis sativus OX=3659 GN=Csa_1G627410 PE=3 ... [more]
A0A1S3BNG03.1e-5673.53Mitochondrial fission 1 protein OS=Cucumis melo OX=3656 GN=LOC103491990 PE=3 SV=... [more]
A0A6J1D4B47.7e-5571.18Mitochondrial fission 1 protein OS=Momordica charantia OX=3673 GN=LOC111017477 P... [more]
BLAST of Lsi06G005690 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022960826.14.0e-5875.29mitochondrial fission 1 protein A-like [Cucurbita moschata] >XP_022988229.1 mito... [more]
XP_038878443.11.5e-5775.88mitochondrial fission 1 protein A-like isoform X1 [Benincasa hispida][more]
XP_004139057.12.2e-5674.12mitochondrial fission 1 protein A [Cucumis sativus] >KGN66531.1 hypothetical pro... [more]
XP_008450362.16.4e-5673.53PREDICTED: mitochondrial fission 1 protein A [Cucumis melo][more]
XP_022148930.11.6e-5471.18mitochondrial fission 1 protein A-like [Momordica charantia][more]
BLAST of Lsi06G005690 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G57090.13.5e-4456.47Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G12390.13.1e-3247.98Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028058Fis1, N-terminal tetratricopeptide repeatPFAMPF14852Fis1_TPR_Ncoord: 55..80
e-value: 7.0E-11
score: 41.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 24..108
e-value: 1.2E-19
score: 72.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 10..137
IPR016543Mitochondria fission 1 proteinPANTHERPTHR13247TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11coord: 108..139
coord: 1..108
NoneNo IPR availablePANTHERPTHR13247:SF13MITOCHONDRIAL FISSION 1 PROTEIN Bcoord: 108..139
coord: 1..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G005690.1Lsi06G005690.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000422 autophagy of mitochondrion
biological_process GO:0000266 mitochondrial fission
biological_process GO:0016559 peroxisome fission
cellular_component GO:0031307 integral component of mitochondrial outer membrane
cellular_component GO:0005779 integral component of peroxisomal membrane
molecular_function GO:0005515 protein binding