Lsi06G003720 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G003720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	DNA repair protein RAD51 homolog
Location	chr06: 4106837 .. 4109151 (-)
RNA-Seq Expression	Lsi06G003720
Synteny	Lsi06G003720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCACTCTTTTTGGCGCCCCTCAAATCTTCTTCAAATTCCCAGTTTCCCTCCACCATTTTTGTTTGTTCTGTGCAATTTGCAGAATTCTTCTGGTTCTGGGTAGTGGGTCGGAATTGATTTGAAGCGATTCTTTCATTTGTGGGTCGGTTGTTTAGTTTCTGATCATGGAGCGCCAAAGAAACCAGAAACCCTCTGAAGAACACGAGGAGACCGAGGAGATTCAGCACGGCCCTTTTCCTGTTGAGCAGCTTCAGGTACCCATTATCCCACTGCATCACAAGAATTAGGGTTCTTCTTTTCTTTTCTTTTTGTTGCATCTATCGATTCCCAAATGCTCAATGAATTTTGAAATTCAAGATTTCGTTTCTAATTGTGGGATCAAGTTATTTGCCCTCGAATTTATTTGCATTGGTTTATTGGAAACGAGGGTTGGGTTTTGATTTGGGATTGATCGTTTCCCAGTAACGATTTTAGAGTTTTTAAGTAATTTTGTTGTATTGAAGGCATCGGGAATTGCTGCAATGGACATAAAAAAGCTTAAAGATGCTGGTTTGTGCACGGTTGAGTCTGTTGCTTACTCTCCCAGGAAAGAATTGCTTCAAATCAAAGGCATAAGCGAGGCTAAAGTTGATAAAATTATTGAAGCAGGCATGTAACTTGTTTTCTGTTTGTTTCATCTTATAACTTTCCGTTTTCCATTTGCTTGATTTGTCTGTCTCTCTGTCTGAATCGATTCATTATCAATAGCTTCCAAGATTGTGCCATTGGGTTTCACAAGCGCTGGCCAACTCCATGCTCAGAGGCTAGAGATCATTCAATTAACATCTGGGTCAAGGGAACTTGACAAGATTCTGGAAGGTTGCTTTCTTGAAGAGCTTTTAAGTTTAATTAGGGCCTGTTTTGCCATTTTTATTGTCATCTCTGGTTTGCTTACTTTAGATATTACACCTTTTTTCCAGGGGGAATTGAGACAGGATCCATTACTGAAATCTATGGGGAGTTCCGTTCTGGGAAAACACAGCTTTGTCACACACTCTGTGTTACCTGCCAAGTGAGTCACTCTTCCTATTCCTGTAAATGTCGTCCACTTTAGTGAGTTCAGCTTAAACTTGTATTATAGGACTATTTTTGGCAATTGAATCTGTTAGTTTATTTCGATCAATGGACGTTTCTGAGGGATTTTGAATTGTCAATCAGCTCCCATTGGATCAAGGTGGTGGAGAGGGAAAGGCAATGTATATAGATGCCGAGGGAACATTTAGACCGCAGAGGCTCTTACAGATTGCAGATAGGTACGACGAGGAGACACGATTGAGATTAGGTGTCACTATGTTCTCTGAGTGTGTGTGTGTAATCAAGTAGCTTATGGTGTCATATTGGTTGTTGCAGATTTGGACTCAATGGTGCTGATGTCTTGGAGAATGTGGCCTATGCTAGAGCTTATAACACTGATCATCAGTCAAGGCTTTTGCTGGAAGCTGCTTCAATGATGGTGGAAACAAGGTAGTTATCATAATTTGTATTTAATAGAACTTAATACTAACATAGTGTTTCTTAAACATTTCAGTTGTCATTTCACTGTCATTAATTTGATGAATTCTAAGACATCTGGATTGATAGTAGTTCCATTGATCATTTTGATTGAAATAAATTATTGAGATCCATTCACATTTTATTCAGGTTTGCTCTCATGATAGTCGATAGCGCTACTGCTCTCTACAGAACGGATTTCTCAGGAAGGGGAGAACTTTCGGCTCGGCAAATGCATCTAGCAAAGTTCTTAAGGAGTCTCCAGAAGTTGGCAGATGAGGTAAAGACACTAATCCTCTAAAGGACCAAAAAATGAAGTACAAGAATGTCATAGTCTGCATTTTTCTTACCATTCACAAGAGCAATGTCTTTTGATGCGCTGTGGTTGTAGTTTGGTGTGGCTGTGGTCATTACAAATCAAGTAGTTGCACAGGTAGATGGTTCAGCAATCTTTGCAGGTCCTCAAATTAAGCCAATTGGTGGAAATATTATGGCACATGCCTCTACGACAAGGTTCGTCACGCTATAATAAAATCTTTATCCTTACCAACTTGAGCTTAACTCAACTGGTTGAGACGGTTATAGAGATTTAAATCTCCATCCACACGTTTATGAACTCAAAATGAAGTTACCCTCGACCAATTATGTTTCTACTGCAGGCTGGCGCTACGGAAAGGACGAGGGGAGGAGCGGATTTGTAAGGTGATAAGTTCTCCTTGTTTAGCTGAGGCTGAAGCACGGTTCCAAGTTTCAGCTGAAGGGGTTACTGATGTCAAAGATTGA

mRNA sequence

CTCCACTCTTTTTGGCGCCCCTCAAATCTTCTTCAAATTCCCAGTTTCCCTCCACCATTTTTGTTTGTTCTGTGCAATTTGCAGAATTCTTCTGGTTCTGGGTAGTGGGTCGGAATTGATTTGAAGCGATTCTTTCATTTGTGGGTCGGTTGTTTAGTTTCTGATCATGGAGCGCCAAAGAAACCAGAAACCCTCTGAAGAACACGAGGAGACCGAGGAGATTCAGCACGGCCCTTTTCCTGTTGAGCAGCTTCAGGCATCGGGAATTGCTGCAATGGACATAAAAAAGCTTAAAGATGCTGGTTTGTGCACGGTTGAGTCTGTTGCTTACTCTCCCAGGAAAGAATTGCTTCAAATCAAAGGCATAAGCGAGGCTAAAGTTGATAAAATTATTGAAGCAGGCATCGCTGGCCAACTCCATGCTCAGAGGCTAGAGATCATTCAATTAACATCTGGGTCAAGGGAACTTGACAAGATTCTGGAAGGGGGAATTGAGACAGGATCCATTACTGAAATCTATGGGGAGTTCCGTTCTGGGAAAACACAGCTTTGTCACACACTCTGTGTTACCTGCCAACTCCCATTGGATCAAGGTGGTGGAGAGGGAAAGGCAATGTATATAGATGCCGAGGGAACATTTAGACCGCAGAGGCTCTTACAGATTGCAGATAGATTTGGACTCAATGGTGCTGATGTCTTGGAGAATGTGGCCTATGCTAGAGCTTATAACACTGATCATCAGTCAAGGCTTTTGCTGGAAGCTGCTTCAATGATGGTGGAAACAAGGTTTGCTCTCATGATAGTCGATAGCGCTACTGCTCTCTACAGAACGGATTTCTCAGGAAGGGGAGAACTTTCGGCTCGGCAAATGCATCTAGCAAAGTTCTTAAGGAGTCTCCAGAAGTTGGCAGATGAGTTTGGTGTGGCTGTGGTCATTACAAATCAAGTAGTTGCACAGGTAGATGGTTCAGCAATCTTTGCAGCTGAGGCTGAAGCACGGTTCCAAGTTTCAGCTGAAGGGGTTACTGATGTCAAAGATTGA

Coding sequence (CDS)

ATGGAGCGCCAAAGAAACCAGAAACCCTCTGAAGAACACGAGGAGACCGAGGAGATTCAGCACGGCCCTTTTCCTGTTGAGCAGCTTCAGGCATCGGGAATTGCTGCAATGGACATAAAAAAGCTTAAAGATGCTGGTTTGTGCACGGTTGAGTCTGTTGCTTACTCTCCCAGGAAAGAATTGCTTCAAATCAAAGGCATAAGCGAGGCTAAAGTTGATAAAATTATTGAAGCAGGCATCGCTGGCCAACTCCATGCTCAGAGGCTAGAGATCATTCAATTAACATCTGGGTCAAGGGAACTTGACAAGATTCTGGAAGGGGGAATTGAGACAGGATCCATTACTGAAATCTATGGGGAGTTCCGTTCTGGGAAAACACAGCTTTGTCACACACTCTGTGTTACCTGCCAACTCCCATTGGATCAAGGTGGTGGAGAGGGAAAGGCAATGTATATAGATGCCGAGGGAACATTTAGACCGCAGAGGCTCTTACAGATTGCAGATAGATTTGGACTCAATGGTGCTGATGTCTTGGAGAATGTGGCCTATGCTAGAGCTTATAACACTGATCATCAGTCAAGGCTTTTGCTGGAAGCTGCTTCAATGATGGTGGAAACAAGGTTTGCTCTCATGATAGTCGATAGCGCTACTGCTCTCTACAGAACGGATTTCTCAGGAAGGGGAGAACTTTCGGCTCGGCAAATGCATCTAGCAAAGTTCTTAAGGAGTCTCCAGAAGTTGGCAGATGAGTTTGGTGTGGCTGTGGTCATTACAAATCAAGTAGTTGCACAGGTAGATGGTTCAGCAATCTTTGCAGCTGAGGCTGAAGCACGGTTCCAAGTTTCAGCTGAAGGGGTTACTGATGTCAAAGATTGA

Protein sequence

MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIEAGIAGQLHAQRLEIIQLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAAEAEARFQVSAEGVTDVKD

Homology

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BLAST of Lsi06G003720 vs. ExPASy Swiss-Prot
Match: Q40134 (DNA repair protein RAD51 homolog OS=Solanum lycopersicum OX=4081 GN=RAD51 PE=2 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 1.0e-135
Identity = 266/342 (77.78%), Postives = 281/342 (82.16%), Query Frame = 0


Query: 1   MERQ-RNQKP-SEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPR 60
           ME+Q RNQK   ++++E E++QHGPFPVEQLQASGIAA+D+KKLKDAGLCTVESV Y+PR
Sbjct: 1   MEQQHRNQKSMQDQNDEIEDVQHGPFPVEQLQASGIAALDVKKLKDAGLCTVESVVYAPR 60

Query: 61  KELLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGI 120
           KELLQIKGISEAKVDKIIEA           A QLHAQRLEIIQ+TSGS+ELDKILEGGI
Sbjct: 61  KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQITSGSKELDKILEGGI 120

Query: 121 ETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
           ETGSITEIYGEFR GKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
Sbjct: 121 ETGSITEIYGEFRCGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180

Query: 181 FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE 240
           +GLNG DVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE
Sbjct: 181 YGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGE 240

Query: 241 LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA----------------- 292
           LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSA+FA                 
Sbjct: 241 LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHAST 300

[Close]

BLAST of Lsi06G003720 vs. ExPASy Swiss-Prot
Match: Q9XED7 (DNA repair protein RAD51 homolog B OS=Zea mays OX=4577 GN=RAD51B PE=2 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 6.4e-133
Identity = 259/335 (77.31%), Postives = 276/335 (82.39%), Query Frame = 0


Query: 6   NQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKELLQIK 65
           +QK S   EE E  +HGPFP+EQLQASGIAA+D+KKLKDAGLCTVESVAYSPRK+LLQIK
Sbjct: 7   HQKASPPIEE-EATEHGPFPIEQLQASGIAALDVKKLKDAGLCTVESVAYSPRKDLLQIK 66

Query: 66  GISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIETGSITE 125
           GISEAKVDKIIEA           A QLHAQRLEIIQLT+GSRELD+IL+GGIETGSITE
Sbjct: 67  GISEAKVDKIIEAASKLVPLGFTSASQLHAQRLEIIQLTTGSRELDQILDGGIETGSITE 126

Query: 126 IYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGAD 185
           +YGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKA+YIDAEGTFRPQR+LQIADRFGLNGAD
Sbjct: 127 MYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKALYIDAEGTFRPQRILQIADRFGLNGAD 186

Query: 186 VLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMH 245
           VLENVAYARAYNTDHQSRLLLEAASMMVETRFALM+VDSATALYRTDFSGRGELSARQMH
Sbjct: 187 VLENVAYARAYNTDHQSRLLLEAASMMVETRFALMVVDSATALYRTDFSGRGELSARQMH 246

Query: 246 LAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------------ 292
           LAKFLRSLQKLADEFGVAVVITNQVVAQVDG+A+FA                        
Sbjct: 247 LAKFLRSLQKLADEFGVAVVITNQVVAQVDGAAMFAGPQIKPIGGNIMAHASTTRLFLRK 306

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BLAST of Lsi06G003720 vs. ExPASy Swiss-Prot
Match: P94102 (DNA repair protein RAD51 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=RAD51 PE=1 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 3.2e-132
Identity = 254/340 (74.71%), Postives = 277/340 (81.47%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           ME++RNQ   ++ ++ EE QHGPFPVEQLQA+GIA++D+KKL+DAGLCTVE VAY+PRK+
Sbjct: 4   MEQRRNQNAVQQQDD-EETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKD 63

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGIS+AKVDKI+EA           A QLHAQR EIIQ+TSGSRELDK+LEGGIET
Sbjct: 64  LLQIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIET 123

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITE+YGEFRSGKTQLCHTLCVTCQLP+DQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 124 GSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 183

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMM+ETRFAL+IVDSATALYRTDFSGRGELS
Sbjct: 184 LNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELS 243

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAA------------------ 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSA+FA                   
Sbjct: 244 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTR 303

[Close]

BLAST of Lsi06G003720 vs. ExPASy Swiss-Prot
Match: Q67EU8 (DNA repair protein RAD51 homolog A OS=Zea mays OX=4577 GN=RAD51A PE=2 SV=2)

HSP 1 Score: 463.8 bits (1192), Expect = 1.5e-129
Identity = 251/340 (73.82%), Postives = 272/340 (80.00%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           M     Q+      E EE++HGPFP+EQLQASGIAA+D+KKLKD+GL TVE+VAY+PRK+
Sbjct: 1   MSSAAQQQQKAAAAEQEEVEHGPFPIEQLQASGIAALDVKKLKDSGLHTVEAVAYTPRKD 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAK DKIIEA           A QLHAQRLEIIQ+T+GSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKADKIIEAASKIVPLGFTSASQLHAQRLEIIQVTTGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHT CVTCQLPLDQGGGEGKA+YIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTPCVTCQLPLDQGGGEGKALYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMM+ETRFALM+VDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALMVVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMH+AKFLRSLQKLADEFGVAVVITNQVVAQVDGSA+FA                   
Sbjct: 241 ARQMHMAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAMFAGPQFKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. ExPASy Swiss-Prot
Match: Q06609 (DNA repair protein RAD51 homolog 1 OS=Homo sapiens OX=9606 GN=RAD51 PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.9e-103
Identity = 198/324 (61.11%), Postives = 246/324 (75.93%), Query Frame = 0


Query: 17  EEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKII 76
           EE   GP P+ +L+  GI A D+KKL++AG  TVE+VAY+P+KEL+ IKGISEAK DKI+
Sbjct: 16  EEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIKGISEAKADKIL 75

Query: 77  -EAG--------IAGQLHAQRLEIIQLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQ 136
            EA          A + H +R EIIQ+T+GS+ELDK+L+GGIETGSITE++GEFR+GKTQ
Sbjct: 76  AEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITEMFGEFRTGKTQ 135

Query: 137 LCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAY 196
           +CHTL VTCQLP+D+GGGEGKAMYID EGTFRP+RLL +A+R+GL+G+DVL+NVAYARA+
Sbjct: 136 ICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARAF 195

Query: 197 NTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 256
           NTDHQ++LL +A++MMVE+R+AL+IVDSATALYRTD+SGRGELSARQMHLA+FLR L +L
Sbjct: 196 NTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRL 255

Query: 257 ADEFGVAVVITNQVVAQVDGSAIFAA---------------------------------- 292
           ADEFGVAVVITNQVVAQVDG+A+FAA                                  
Sbjct: 256 ADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIY 315

[Close]

BLAST of Lsi06G003720 vs. ExPASy TrEMBL
Match: A0A6J1JID0 (DNA repair protein RAD51 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484865 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.7e-144
Identity = 285/340 (83.82%), Postives = 288/340 (84.71%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEEHEE EEIQHGPFPVEQLQASGIAA+DIKKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEHEEAEEIQHGPFPVEQLQASGIAAIDIKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQK+ADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKMADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. ExPASy TrEMBL
Match: A0A6J1H808 (DNA repair protein RAD51 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461322 PE=3 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 3.7e-144
Identity = 285/340 (83.82%), Postives = 288/340 (84.71%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEEHEE EEIQHGPFPVEQLQASGIAA+DIKKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEHEEAEEIQHGPFPVEQLQASGIAAIDIKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQK+ADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKMADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. ExPASy TrEMBL
Match: A0A6J1D1M8 (DNA repair protein RAD51 homolog OS=Momordica charantia OX=3673 GN=LOC111016458 PE=3 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 6.4e-144
Identity = 284/340 (83.53%), Postives = 288/340 (84.71%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEEHEE EEIQHGPFPVEQLQASGIA++D+KKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEHEEAEEIQHGPFPVEQLQASGIASIDVKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. ExPASy TrEMBL
Match: A0A0A0M2A5 (DNA repair protein RAD51 homolog OS=Cucumis sativus OX=3659 GN=Csa_1G597830 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.8e-143
Identity = 284/340 (83.53%), Postives = 287/340 (84.41%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEE EE +EIQHGPFPVEQLQASGIAAMD+KKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEQEEADEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. ExPASy TrEMBL
Match: A0A1S3BRK0 (DNA repair protein RAD51 homolog OS=Cucumis melo OX=3656 GN=LOC103492402 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 1.8e-143
Identity = 284/340 (83.53%), Postives = 287/340 (84.41%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEE EE +EIQHGPFPVEQLQASGIAAMD+KKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEQEEADEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. NCBI nr
Match: XP_023515549.1 (DNA repair protein RAD51 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 520.8 bits (1340), Expect = 7.7e-144
Identity = 285/340 (83.82%), Postives = 288/340 (84.71%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEEHEE EEIQHGPFPVEQLQASGIAA+DIKKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEHEEVEEIQHGPFPVEQLQASGIAAIDIKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQK+ADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKMADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. NCBI nr
Match: XP_022960586.1 (DNA repair protein RAD51 homolog [Cucurbita moschata] >XP_022987254.1 DNA repair protein RAD51 homolog [Cucurbita maxima] >KAG7023729.1 DNA repair protein RAD51-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 520.8 bits (1340), Expect = 7.7e-144
Identity = 285/340 (83.82%), Postives = 288/340 (84.71%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEEHEE EEIQHGPFPVEQLQASGIAA+DIKKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEHEEAEEIQHGPFPVEQLQASGIAAIDIKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQK+ADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKMADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. NCBI nr
Match: XP_022147563.1 (DNA repair protein RAD51 homolog [Momordica charantia])

HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143
Identity = 284/340 (83.53%), Postives = 288/340 (84.71%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEEHEE EEIQHGPFPVEQLQASGIA++D+KKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEHEEAEEIQHGPFPVEQLQASGIASIDVKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. NCBI nr
Match: XP_038879788.1 (DNA repair protein RAD51 homolog [Benincasa hispida])

HSP 1 Score: 519.2 bits (1336), Expect = 2.2e-143
Identity = 285/340 (83.82%), Postives = 287/340 (84.41%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEEH E +EIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEHVEADEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. NCBI nr
Match: XP_004144057.1 (DNA repair protein RAD51 homolog [Cucumis sativus] >XP_008450977.1 PREDICTED: DNA repair protein RAD51 homolog [Cucumis melo] >KGN66336.1 hypothetical protein Csa_006993 [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 3.8e-143
Identity = 284/340 (83.53%), Postives = 287/340 (84.41%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           MERQRNQKPSEE EE +EIQHGPFPVEQLQASGIAAMD+KKLKDAGLCTVESVAYSPRKE
Sbjct: 1   MERQRNQKPSEEQEEADEIQHGPFPVEQLQASGIAAMDVKKLKDAGLCTVESVAYSPRKE 60

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGISEAKVDKIIEA           AGQLHAQRLEIIQLTSGSRELDKILEGGIET
Sbjct: 61  LLQIKGISEAKVDKIIEAASKIVPLGFTSAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS
Sbjct: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA------------------- 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA                   
Sbjct: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTR 300

[Close]

BLAST of Lsi06G003720 vs. TAIR 10
Match: AT5G20850.1 (RAS associated with diabetes protein 51 )

HSP 1 Score: 472.6 bits (1215), Expect = 2.2e-133
Identity = 254/340 (74.71%), Postives = 277/340 (81.47%), Query Frame = 0


Query: 1   MERQRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKE 60
           ME++RNQ   ++ ++ EE QHGPFPVEQLQA+GIA++D+KKL+DAGLCTVE VAY+PRK+
Sbjct: 4   MEQRRNQNAVQQQDD-EETQHGPFPVEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPRKD 63

Query: 61  LLQIKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIET 120
           LLQIKGIS+AKVDKI+EA           A QLHAQR EIIQ+TSGSRELDK+LEGGIET
Sbjct: 64  LLQIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGIET 123

Query: 121 GSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 180
           GSITE+YGEFRSGKTQLCHTLCVTCQLP+DQGGGEGKAMYIDAEGTFRPQRLLQIADRFG
Sbjct: 124 GSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADRFG 183

Query: 181 LNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELS 240
           LNGADVLENVAYARAYNTDHQSRLLLEAASMM+ETRFAL+IVDSATALYRTDFSGRGELS
Sbjct: 184 LNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGELS 243

Query: 241 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFAA------------------ 292
           ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSA+FA                   
Sbjct: 244 ARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTR 303

[Close]

BLAST of Lsi06G003720 vs. TAIR 10
Match: AT3G22880.1 (DNA repair (Rad51) family protein )

HSP 1 Score: 245.7 bits (626), Expect = 4.5e-65
Identity = 145/336 (43.15%), Postives = 193/336 (57.44%), Query Frame = 0


Query: 4   QRNQKPSEEHEETEEIQHGPFPVEQLQASGIAAMDIKKLKDAGLCTVESVAYSPRKELLQ 63
           + +Q    E EE +E +     +++L A GI A D+KKL++AG+ T   +    +K L  
Sbjct: 9   ETSQMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMMHTKKNLTG 68

Query: 64  IKGISEAKVDKIIEAG---------IAGQLHAQRLEIIQLTSGSRELDKILEGGIETGSI 123
           IKG+SEAKVDKI EA                 +R  ++++T+G + LD +L GGIET +I
Sbjct: 69  IKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLGGGIETSAI 128

Query: 124 TEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNG 183
           TE +GEFRSGKTQL HTLCVT QLP +  GG GK  YID EGTFRP R++ IA+RFG++ 
Sbjct: 129 TEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP 188

Query: 184 ADVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIVDSATALYRTDFSGRGELSARQ 243
             VL+N+ YARAY  +HQ  LLL  A+ M E  F ++IVDS  AL+R DF+GRGEL+ RQ
Sbjct: 189 GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTGRGELADRQ 248

Query: 244 MHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSAIFA---------------------- 292
             LA+ L  L K+A+EF VAV +TNQV+A   G    +                      
Sbjct: 249 QKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHAATIRLLFR 308

[Close]

BLAST of Lsi06G003720 vs. TAIR 10
Match: AT2G45280.1 (RAS associated with diabetes protein 51C )

HSP 1 Score: 95.5 bits (236), Expect = 7.4e-20
Identity = 77/261 (29.50%), Postives = 121/261 (46.36%), Query Frame = 0


Query: 41  KLKDAGLCTVESVAYSPRKELLQIKGISEAKVDKIIE----------------AGIAGQL 100
           KL  AG   + S+A     +L +   I+E +  +I++                A  A  +
Sbjct: 36  KLISAGYTCLSSIASVSSSDLARDANITEEEAFEILKLANQSCCNGSRSLINGAKNAWDM 95

Query: 101 HAQRLEIIQLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGG 160
             +   + ++T+   +LD IL GGI    +TEI G    GKTQ+   L V  Q+P + GG
Sbjct: 96  LHEEESLPRITTSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGG 155

Query: 161 GEGKAMYIDAEGTFRPQRLLQIAD--------------------RFGLNGADVLENVAYA 220
             GKA+YID EG+F  +R LQIA+                    +  +   D+LEN+ Y 
Sbjct: 156 LGGKAIYIDTEGSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYF 215

Query: 221 RAYNTDHQSRLLLEAASMMVETR-FALMIVDSATALYRTDFSGRGELSARQMHLAKFLRS 265
           R  +   Q  L+      + E +   ++IVDS T  +R D+    +L+ R   L++    
Sbjct: 216 RVCSYTEQIALVNHLEKFISENKDVKVVIVDSITFHFRQDYD---DLAQRTRVLSEMALK 275

[Close]

BLAST of Lsi06G003720 vs. TAIR 10
Match: AT5G57450.1 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-19
Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 0


Query: 93  QLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 152
           +LT+G   LD  L GGI   S+TEI  E   GKTQLC  L +  QLP+  GG  G ++Y+
Sbjct: 20  KLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYL 79

Query: 153 DAEGTFRPQRLLQIADRFGLNGADVLEN--------VAYARAYNTDHQSRLL--LEAASM 212
            +E  F  +RL Q++  F  +   +  N        V     ++ DH   ++  ++    
Sbjct: 80  HSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLFDIMPRIDGFVG 139

Query: 213 MVETRF--ALMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITN 269
             +TRF   L+++DS  AL+R++F     +L  R     K    L++LA +F +A+VITN
Sbjct: 140 NSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASKFDLAIVITN 199

[Close]

BLAST of Lsi06G003720 vs. TAIR 10
Match: AT5G57450.2 (homolog of X-ray repair cross complementing 3 (XRCC3) )

HSP 1 Score: 94.7 bits (234), Expect = 1.3e-19
Identity = 64/189 (33.86%), Postives = 98/189 (51.85%), Query Frame = 0


Query: 93  QLTSGSRELDKILEGGIETGSITEIYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYI 152
           +LT+G   LD  L GGI   S+TEI  E   GKTQLC  L +  QLP+  GG  G ++Y+
Sbjct: 20  KLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHGGLNGSSLYL 79

Query: 153 DAEGTFRPQRLLQIADRFGLNGADVLEN--------VAYARAYNTDHQSRLL--LEAASM 212
            +E  F  +RL Q++  F  +   +  N        V     ++ DH   ++  ++    
Sbjct: 80  HSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLFDIMPRIDGFVG 139

Query: 213 MVETRF--ALMIVDSATALYRTDFSGR-GELSARQMHLAKFLRSLQKLADEFGVAVVITN 269
             +TRF   L+++DS  AL+R++F     +L  R     K    L++LA +F +A+VITN
Sbjct: 140 NSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASKFDLAIVITN 199

The following BLAST results are available for this feature:

BLAST of Lsi06G003720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40134	1.0e-135	77.78	DNA repair protein RAD51 homolog OS=Solanum lycopersicum OX=4081 GN=RAD51 PE=2 S...	[more]
Q9XED7	6.4e-133	77.31	DNA repair protein RAD51 homolog B OS=Zea mays OX=4577 GN=RAD51B PE=2 SV=1	[more]
P94102	3.2e-132	74.71	DNA repair protein RAD51 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=RAD51 PE=1...	[more]
Q67EU8	1.5e-129	73.82	DNA repair protein RAD51 homolog A OS=Zea mays OX=4577 GN=RAD51A PE=2 SV=2	[more]
Q06609	6.9e-103	61.11	DNA repair protein RAD51 homolog 1 OS=Homo sapiens OX=9606 GN=RAD51 PE=1 SV=1	[more]

BLAST of Lsi06G003720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JID0	3.7e-144	83.82	DNA repair protein RAD51 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484865 PE=...	[more]
A0A6J1H808	3.7e-144	83.82	DNA repair protein RAD51 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461322 P...	[more]
A0A6J1D1M8	6.4e-144	83.53	DNA repair protein RAD51 homolog OS=Momordica charantia OX=3673 GN=LOC111016458 ...	[more]
A0A0A0M2A5	1.8e-143	83.53	DNA repair protein RAD51 homolog OS=Cucumis sativus OX=3659 GN=Csa_1G597830 PE=3...	[more]
A0A1S3BRK0	1.8e-143	83.53	DNA repair protein RAD51 homolog OS=Cucumis melo OX=3656 GN=LOC103492402 PE=3 SV...	[more]

BLAST of Lsi06G003720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023515549.1	7.7e-144	83.82	DNA repair protein RAD51 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022960586.1	7.7e-144	83.82	DNA repair protein RAD51 homolog [Cucurbita moschata] >XP_022987254.1 DNA repair...	[more]
XP_022147563.1	1.3e-143	83.53	DNA repair protein RAD51 homolog [Momordica charantia]	[more]
XP_038879788.1	2.2e-143	83.82	DNA repair protein RAD51 homolog [Benincasa hispida]	[more]
XP_004144057.1	3.8e-143	83.53	DNA repair protein RAD51 homolog [Cucumis sativus] >XP_008450977.1 PREDICTED: DN...	[more]

BLAST of Lsi06G003720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20850.1	2.2e-133	74.71	RAS associated with diabetes protein 51	[more]
AT3G22880.1	4.5e-65	43.15	DNA repair (Rad51) family protein	[more]
AT2G45280.1	7.4e-20	29.50	RAS associated with diabetes protein 51C	[more]
AT5G57450.1	1.3e-19	33.86	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]
AT5G57450.2	1.3e-19	33.86	homolog of X-ray repair cross complementing 3 (XRCC3)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 111..285 e-value: 6.0E-5 score: 32.4
IPR016467	DNA recombination and repair protein, RecA-like	PIRSF	PIRSF005856	Rad51	coord: 11..279 e-value: 1.1E-101 score: 338.1 coord: 271..291 e-value: 25.0 score: 1.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 89..291 e-value: 7.0E-68 score: 230.9
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 93..270
None	No IPR available	PFAM	PF14520	HHH_5	coord: 30..78 e-value: 2.8E-6 score: 27.8
None	No IPR available	GENE3D	1.10.150.20		coord: 2..82 e-value: 5.8E-28 score: 98.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR22942	RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER	coord: 4..272
None	No IPR available	PANTHER	PTHR22942:SF45	DNA REPAIR PROTEIN RAD51 HOMOLOG A	coord: 4..272
IPR013632	DNA recombination and repair protein Rad51-like, C-terminal	PFAM	PF08423	Rad51	coord: 81..275 e-value: 4.5E-96 score: 321.0
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 90..261 score: 47.882534
IPR033925	Rad51/DMC1/RadA	CDD	cd01123	Rad51_DMC1_radA	coord: 94..273 e-value: 1.40547E-104 score: 302.58
IPR010995	DNA repair Rad51/transcription factor NusA, alpha-helical	SUPERFAMILY	47794	Rad51 N-terminal domain-like	coord: 18..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G003720.1	Lsi06G003720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070192	chromosome organization involved in meiotic cell cycle
biological_process	GO:0006281	DNA repair
biological_process	GO:0006312	mitotic recombination
biological_process	GO:1990426	mitotic recombination-dependent replication fork processing
biological_process	GO:0007131	reciprocal meiotic recombination
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010332	response to gamma radiation
biological_process	GO:0042148	strand invasion
biological_process	GO:0000730	DNA recombinase assembly
cellular_component	GO:0000794	condensed nuclear chromosome
molecular_function	GO:0008094	ATP-dependent activity, acting on DNA
molecular_function	GO:0000150	DNA strand exchange activity
molecular_function	GO:0003690	double-stranded DNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000166	nucleotide binding