Lsi06G003210 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G003210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionGrowth-regulating factor
Locationchr06: 3633517 .. 3635141 (-)
RNA-Seq ExpressionLsi06G003210
SyntenyLsi06G003210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCTGCTTTAGTTTGTGGGTTTCTGTAGAGTGTCAGAGACAAGAGCTGCAAAAAAAAGAGGGGAAAAAAAAACCAGTTTCCCTCCACAACCAGAAGTTACAGAGAGATGCAGTGTCATAATATGAACACTTGAACAGACAAGAAGAGAGAAGGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTGGGCATGCAGCACTATAATCAGAACCATTAGTTTATCCATTGCTGAAGATTCTGCAACTCAAATGGTCTCTGAAATAAATATACAGTATCAGACTTAAGCAATACTCAGAGGGCTCTAGTAATGACCTAAACAGAGGAGCTTTCCCACACTCTCGCCTGGTTTCATCATCTCTCCCTTAGAGCTGTGTCCTGCTTGGCGCTTTGAGGTTCTTTGTTGTTTTTTCAACTGATAAATCGACTTGTGTTATCTTTTTTTATCTATTTTAAGTATGAGCGCCAGAAGTATGTTTCCCTTCACATCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTTAAATACATGGTTTCTGGTATCCCTATACCTCCTGATCTTCTTTTCAGTATTAAAAGAAGTACCTTGGACTCTACTTTCACTTCTAAGCTCTTCCCCCACCATCCTCAACATGGTAAATCAACATCCCCCTCTCTCTCTTCTTTCTCTCTTTCTCTTTCTCTCTCTCTGAAATGTTTGTGTTTCATGCAGTTGGATGGAACTATTTGCAGATGAGTTTGGGGAGGAAAATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGTTCAAAAGAGGCATATCCAGATTCGAAATACTGTGAGAGACACATGCATAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGATGTTTCGAAAACAACAGCAACAAATGACATAAACCACCTCTCAAATCCAGCATTTTCTTCCTTAAACAACAACTCATCCTTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTCCTAATGGAAATGGCATATCAACCAAAGACACCAATACCCTCTTGCTTCTGGAACCTGGTTCTTACTCAAACAGAAACCCAGATTACAGGTTTGTAGAACATTCTTCTCTTTGGAGTTGGAAGTTCTAATAATACATATTGAGATTCTGACTTTTGTCCATCTTCTGTTATTAAAAAGAAGTAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAACATGTTTTCTTCTCGAAAGAACCATCTGAAGCCACTGCAAGAACTGATTTCTCTGCTTCGTCCATAGCTAGTTCTTTGCAACTGACACCACTTACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACAGCTCCTCTTTGCAGAGTGATCAATCATGTTATCAGCTTCATCAGAGTCTCACAGACCCTTTGAAGCAACAAAAGAGAGAGGAATCACAGAAGACCGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAAAGAGGATCATGGCTTGATTTTGATGATAAATCATCAAATACTAGCTCAGTTTCCACCACTCGGCTCTCAATTTCCATTCCCACAGCTTCCAACGACTTCCCCATTTTCAGATCCAAAAACCCATAG

mRNA sequence

CTCCTGCTTTAGTTTGTGGGTTTCTGTAGAGTGTCAGAGACAAGAGCTGCAAAAAAAAGAGGGGAAAAAAAAACCAGTTTCCCTCCACAACCAGAAGTTACAGAGAGATGCAGTGTCATAATATGAACACTTGAACAGACAAGAAGAGAGAAGGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGGTGGGCATGCAGCACTATAATCAGAACCATTAGTTTATCCATTGCTGAAGATTCTGCAACTCAAATGGTCTCTGAAATAAATATACAGTATCAGACTTAAGCAATACTCAGAGGGCTCTAGTAATGACCTAAACAGAGGAGCTTTCCCACACTCTCGCCTGGTTTCATCATCTCTCCCTTAGAGCTGTGTCCTGCTTGGCGCTTTGAGGTTCTTTGTTGTTTTTTCAACTGATAAATCGACTTGTGTTATCTTTTTTTATCTATTTTAAGTATGAGCGCCAGAAGTATGTTTCCCTTCACATCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTTAAATACATGGTTTCTGGTATCCCTATACCTCCTGATCTTCTTTTCAGTATTAAAAGAAGTACCTTGGACTCTACTTTCACTTCTAAGCTCTTCCCCCACCATCCTCAACATGTTGGATGGAACTATTTGCAGATGAGTTTGGGGAGGAAAATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGTTCAAAAGAGGCATATCCAGATTCGAAATACTGTGAGAGACACATGCATAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGATGTTTCGAAAACAACAGCAACAAATGACATAAACCACCTCTCAAATCCAGCATTTTCTTCCTTAAACAACAACTCATCCTTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTCCTAATGGAAATGGCATATCAACCAAAGACACCAATACCCTCTTGCTTCTGGAACCTGGTTCTTACTCAAACAGAAACCCAGATTACAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAACATGTTTTCTTCTCGAAAGAACCATCTGAAGCCACTGCAAGAACTGATTTCTCTGCTTCGTCCATAGCTAGTTCTTTGCAACTGACACCACTTACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACAGCTCCTCTTTGCAGAGTGATCAATCATGTTATCAGCTTCATCAGAGTCTCACAGACCCTTTGAAGCAACAAAAGAGAGAGGAATCACAGAAGACCGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAAAGAGGATCATGGCTTGATTTTGATGATAAATCATCAAATACTAGCTCAGTTTCCACCACTCGGCTCTCAATTTCCATTCCCACAGCTTCCAACGACTTCCCCATTTTCAGATCCAAAAACCCATAG

Coding sequence (CDS)

ATGAGCGCCAGAAGTATGTTTCCCTTCACATCAGCTCAGTGGCAGGAGCTTGAACATCAAGCTCTCATCTTTAAATACATGGTTTCTGGTATCCCTATACCTCCTGATCTTCTTTTCAGTATTAAAAGAAGTACCTTGGACTCTACTTTCACTTCTAAGCTCTTCCCCCACCATCCTCAACATGTTGGATGGAACTATTTGCAGATGAGTTTGGGGAGGAAAATAGACCCAGAACCAGGGAGGTGCAGGAGAACTGATGGGAAAAAGTGGAGATGTTCAAAAGAGGCATATCCAGATTCGAAATACTGTGAGAGACACATGCATAGAGGGAAAAATCGTTCAAGAAAGCCTGTGGATGTTTCGAAAACAACAGCAACAAATGACATAAACCACCTCTCAAATCCAGCATTTTCTTCCTTAAACAACAACTCATCCTTACTCTCCTATCGGCCCTTCCCCGCTCATCAAATATCTTCAACTCCTAATGGAAATGGCATATCAACCAAAGACACCAATACCCTCTTGCTTCTGGAACCTGGTTCTTACTCAAACAGAAACCCAGATTACAGGTACACTTATGGGCTAAAAGAGGAAGTGGATGAACATGTTTTCTTCTCGAAAGAACCATCTGAAGCCACTGCAAGAACTGATTTCTCTGCTTCGTCCATAGCTAGTTCTTTGCAACTGACACCACTTACGATGAGTTGTTCTTCTCTATACCCAAAACAAAACAACAGCTCCTCTTTGCAGAGTGATCAATCATGTTATCAGCTTCATCAGAGTCTCACAGACCCTTTGAAGCAACAAAAGAGAGAGGAATCACAGAAGACCGTTCATCGATTCTTCGATGAATGGCCTCCAAAAGAAAGAGGATCATGGCTTGATTTTGATGATAAATCATCAAATACTAGCTCAGTTTCCACCACTCGGCTCTCAATTTCCATTCCCACAGCTTCCAACGACTTCCCCATTTTCAGATCCAAAAACCCATAG

Protein sequence

MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQHVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVSKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPGSYSNRNPDYRYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCSSLYPKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFDDKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP
Homology
BLAST of Lsi06G003210 vs. ExPASy Swiss-Prot
Match: Q8L8A6 (Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.9e-49
Identity = 99/178 (55.62%), Postives = 129/178 (72.47%), Query Frame = 0

Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQHVGWNYL 67
           PFT  QW+ELEHQALI+KYMVSG+P+PP+L+FSI+RS LD++  S+L PH  Q +GW   
Sbjct: 16  PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPH--QSLGWGCY 75

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVSKTTATN 127
           QM  GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK +D ++TT T 
Sbjct: 76  QMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQNQTTTT- 135

Query: 128 DINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPGSYSNR 186
               L++P+ S  NNN+        P+  +SS+ + N  ST  + +   ++  S SNR
Sbjct: 136 ---PLTSPSLSFTNNNN--------PSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNR 178

BLAST of Lsi06G003210 vs. ExPASy Swiss-Prot
Match: A2XA73 (Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 7.1e-48
Identity = 148/384 (38.54%), Postives = 190/384 (49.48%), Query Frame = 0

Query: 7   FPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRS-TLDS---TFTSKLFPHHPQHV 66
           +PFT++QWQELEHQALI+KYM SG PIP DL+  ++RS  LDS   T  S  FP  P  +
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPS-L 76

Query: 67  GWNYLQMSLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVS 126
           GW    M  GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPV++S
Sbjct: 77  GWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMS 136

Query: 127 KTT-------ATNDI-NHLSNPAFSSLNNNSSLLSY-RPFP--------------AHQIS 186
             T       AT+   N  +  A ++   +S   SY RP P              A   +
Sbjct: 137 LATPPPPSSSATSAASNSSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGGPYAAATA 196

Query: 187 STPNGNGISTKDTNTLLLLE-------PGSYSNRNPDYRYTYGLKEEVDEHVFFSKEPSE 246
            TP       + +   L ++       P  YS  + +Y Y +  KE   EH FF    S+
Sbjct: 197 RTPAAAAYHAQVSPFHLHIDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAFF----SD 256

Query: 247 ATARTDFSASSIASSLQLTPLTM----SCSSLYP-----------------------KQN 306
            T R    A++     Q   L M    S + L+P                       K+ 
Sbjct: 257 GTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDEKER 316

Query: 307 NSSSLQSDQSCYQLHQS--LTDPLKQQKREESQKTVHRFFDEWPPKE--RGSWLDFDDKS 325
                Q  Q C+ L     L  P        +QK +  FFDEWP ++  +GSW+  + + 
Sbjct: 317 RQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEKNSKGSWMGLEGE- 376

BLAST of Lsi06G003210 vs. ExPASy Swiss-Prot
Match: Q6AWY8 (Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.2e-47
Identity = 148/385 (38.44%), Postives = 191/385 (49.61%), Query Frame = 0

Query: 7   FPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRS-TLDS---TFTSKLFPHHPQHV 66
           +PFT++QWQELEHQALI+KYM SG PIP DL+  ++RS  LDS   T  S  FP  P  +
Sbjct: 17  YPFTASQWQELEHQALIYKYMASGTPIPSDLILPLRRSFLLDSALATSPSLAFPPQPS-L 76

Query: 67  GWNYLQMSLGRKI-DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVS 126
           GW    M  GRK  DPEPGRCRRTDGKKWRCSKEAYPDSKYCE+HMHRGKNRSRKPV++S
Sbjct: 77  GWGCFGMGFGRKAEDPEPGRCRRTDGKKWRCSKEAYPDSKYCEKHMHRGKNRSRKPVEMS 136

Query: 127 KTT-------ATNDINHLS-NPAFSSLNNNSSLLSY-RPFP--------------AHQIS 186
             T       AT+  ++ S   A ++   +S   SY RP P              A   +
Sbjct: 137 LATPPPPSSSATSAASNTSAGVAPTTTTTSSPAPSYSRPAPHDAAPYQALYGGPYAAATA 196

Query: 187 STPNGNGISTKDTNTLLLLE-------PGSYSNRNPDYRYTYGLKEEVDEHVFFSKEPSE 246
            TP       + +   L L+       P  YS  + +Y Y +  KE   EH FF    S+
Sbjct: 197 RTPAAAAYHAQVSPFHLQLDTTHPHPPPSYYSMDHKEYAYGHATKEVHGEHAFF----SD 256

Query: 247 ATARTDFSASSIASSLQLTPLTM----SCSSLYP------------------------KQ 306
            T R    A++     Q   L M    S + L+P                        ++
Sbjct: 257 GTEREHHHAAAGHGQWQFKQLGMEPKQSTTPLFPGAGYGHTAASPYAIDLSKEDDDEKER 316

Query: 307 NNSSSLQSDQSCYQLHQS--LTDPLKQQKREESQKTVHRFFDEWPPKE--RGSWLDFDDK 325
                 Q  Q C+ L     L  P        +QK +  FFDEWP ++  +GSW+  + +
Sbjct: 317 RQQQQQQQQQHCFLLGADLRLEKPAGHDHAAAAQKPLRHFFDEWPHEKNSKGSWMGLEGE 376

BLAST of Lsi06G003210 vs. ExPASy Swiss-Prot
Match: Q6ZIK5 (Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.3e-45
Identity = 141/359 (39.28%), Postives = 197/359 (54.87%), Query Frame = 0

Query: 2   SARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQH 61
           +A  + PFT+AQ++ELE QALI+KY+V+G+P+PPDL+  I+R  LDS   +  F +HP  
Sbjct: 58  AAARLPPFTAAQYEELEQQALIYKYLVAGVPVPPDLVLPIRRG-LDS--LAARFYNHPA- 117

Query: 62  VGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD-- 121
           +G+       G+K+DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRG+NRSRKPV+  
Sbjct: 118 LGYG---PYFGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVETQ 177

Query: 122 -VSKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLE 181
            V+++   + +   +    ++ +N SS  ++  +PA    S   G G +   +    L  
Sbjct: 178 LVAQSQPPSSVVGSAAAPLAAASNGSSFQNHSLYPA-IAGSNGGGGGRNMPSSFGSALGS 237

Query: 182 PGSYSNRNP----------DYRYT-YGLKEEVDEHVFFSKEPSEATARTDFSASSIASSL 241
                N  P          D RYT YG +   DE         ++   T+   +SI +  
Sbjct: 238 QLHMDNAAPYAAVGGGTGKDLRYTAYGTRSLADE---------QSQLITEAINTSIENPW 297

Query: 242 QLTPLTMSCSSLYP-------------KQNNSSSLQSDQ----SCYQLHQSLTDPLKQQK 301
           +L P   S +S +P              QN  SSL   Q    S +    +  D +KQ+ 
Sbjct: 298 RLLP---SQNSPFPLSSYSQLGALSDLGQNTPSSLSKVQRQPLSFFGNDYAAVDSVKQE- 357

Query: 302 REESQKTVHRFFDEWPPKERGSWLDFDDKSSNTSSVSTTRLSISIPTASNDFPIFRSKN 330
                +T+  FFDEW PK R SW D  D+++N SS S T+LSISIP AS+DF    S++
Sbjct: 358 ----NQTLRPFFDEW-PKGRDSWSDLADENANLSSFSGTQLSISIPMASSDFSAASSRS 390

BLAST of Lsi06G003210 vs. ExPASy Swiss-Prot
Match: Q6AWY6 (Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 9.7e-45
Identity = 145/354 (40.96%), Postives = 188/354 (53.11%), Query Frame = 0

Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQHVGWNYL 67
           PFT+AQ++ELE QALI+KY+V+G+P+P DLL  I+R  LDS   +  F HHP     +Y 
Sbjct: 53  PFTAAQYEELEQQALIYKYLVAGVPVPADLLLPIRRG-LDS--LASRFYHHPVLGYGSY- 112

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV------S 127
               G+K+DPEPGRCRRTDGKKWRCSKEA PDSKYCERHMHRG+NRSRKPV+       S
Sbjct: 113 ---FGKKLDPEPGRCRRTDGKKWRCSKEAAPDSKYCERHMHRGRNRSRKPVEAQLVAPHS 172

Query: 128 KTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGN-----------GISTKD 187
           +  AT     +++ AF     N SL     +PA       NG            G     
Sbjct: 173 QPPATAPAAAVTSTAF----QNHSL-----YPAIANGGGANGGGGGGGGGGSAPGSFALG 232

Query: 188 TNTLLLLE-PGSYSN-----RNPDYRYT-YGLKEEVDEHVFFSKEPSEATARTDFSASSI 247
           +NT L ++   SYS       N D+RY+ YG++   DEH          T   D S  + 
Sbjct: 233 SNTQLHMDNAASYSTVAAGAGNKDFRYSAYGVRPLADEH------SPLITGAMDTSIDNS 292

Query: 248 ASSLQLTPLTMSCSSLYPKQNNSSSLQSDQSCYQLHQSLTDPLK--------QQKREESQ 307
              L     T S SS YP   N S L  +  C  L +   +PL             ++  
Sbjct: 293 WCLLPSQTSTFSVSS-YPMLGNLSELDQNTIC-SLPKVEREPLSFFGSDYVTVDSGKQEN 352

Query: 308 KTVHRFFDEWPPKERGSWLDFDDKSSNTSSVSTTRLSISIPTASNDFPIFRSKN 330
           +T+  FFDEW PK R SW D  D +S  ++ S T+LSISIP A++DF    S++
Sbjct: 353 QTLRPFFDEW-PKARDSWPDLADDNS-LATFSATQLSISIPMATSDFSTTSSRS 380

BLAST of Lsi06G003210 vs. ExPASy TrEMBL
Match: A0A6J1D2N6 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174
Identity = 304/330 (92.12%), Postives = 320/330 (96.97%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS+FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180
            KTTATNDINHLSNPAFSSL NNSS+LSYRPFPAHQIS TPNGN IST+DT+TLLLLE G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSNRNPDYRYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCSSLY 240
           SYS+RNPDYRYTYGL+E+VDEHVFFS+EPSE T+RTDFSASS+A SLQLTPL+MSCSSLY
Sbjct: 181 SYSDRNPDYRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCSSLY 240

Query: 241 PKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFDDKS 300
           PKQNN SSLQ+DQSCYQ+H+SLTDPLKQQKR+ESQKTVHRFFDEWPPKERGSWLDFDDK+
Sbjct: 241 PKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFDDKT 300

Query: 301 SNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
           SN  SVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 SNNGSVSTTRLSISIPTASNDFPIFRSKNP 330

BLAST of Lsi06G003210 vs. ExPASy TrEMBL
Match: A0A6J1D2Q2 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.3e-173
Identity = 304/332 (91.57%), Postives = 320/332 (96.39%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS+FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180
            KTTATNDINHLSNPAFSSL NNSS+LSYRPFPAHQIS TPNGN IST+DT+TLLLLE G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSNRNPDY--RYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCSS 240
           SYS+RNPDY  RYTYGL+E+VDEHVFFS+EPSE T+RTDFSASS+A SLQLTPL+MSCSS
Sbjct: 181 SYSDRNPDYRSRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCSS 240

Query: 241 LYPKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFDD 300
           LYPKQNN SSLQ+DQSCYQ+H+SLTDPLKQQKR+ESQKTVHRFFDEWPPKERGSWLDFDD
Sbjct: 241 LYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFDD 300

Query: 301 KSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
           K+SN  SVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 KTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 332

BLAST of Lsi06G003210 vs. ExPASy TrEMBL
Match: A0A6J1D0G4 (Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=1)

HSP 1 Score: 616.7 bits (1589), Expect = 5.7e-173
Identity = 304/333 (91.29%), Postives = 320/333 (96.10%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS+FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180
            KTTATNDINHLSNPAFSSL NNSS+LSYRPFPAHQIS TPNGN IST+DT+TLLLLE G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSNRNPDY---RYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCS 240
           SYS+RNPDY   RYTYGL+E+VDEHVFFS+EPSE T+RTDFSASS+A SLQLTPL+MSCS
Sbjct: 181 SYSDRNPDYRRSRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCS 240

Query: 241 SLYPKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFD 300
           SLYPKQNN SSLQ+DQSCYQ+H+SLTDPLKQQKR+ESQKTVHRFFDEWPPKERGSWLDFD
Sbjct: 241 SLYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFD 300

Query: 301 DKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
           DK+SN  SVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 DKTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 333

BLAST of Lsi06G003210 vs. ExPASy TrEMBL
Match: A0A1S3BQB1 (Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103492362 PE=3 SV=1)

HSP 1 Score: 598.6 bits (1542), Expect = 1.6e-167
Identity = 306/334 (91.62%), Postives = 316/334 (94.61%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPP+LLFSIKRS LDS FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPELLFSIKRSALDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
            VGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  PVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTP-NGNGISTKDTNTLLLLEP 180
            KTTATN+INHLSNP FSSLN+NSSLLSYRPFPAHQISSTP NGNGIS KDTNTLLLLEP
Sbjct: 121 LKTTATNEINHLSNPTFSSLNSNSSLLSYRPFPAHQISSTPNNGNGISIKDTNTLLLLEP 180

Query: 181 GSYSNRNPDY--RYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCS 240
           GSYS++NPDY  RYTYGLKEEVDE VFFS+EPSEAT R DFSASSIASSLQLTPLTMS S
Sbjct: 181 GSYSDKNPDYRSRYTYGLKEEVDEKVFFSQEPSEATGRADFSASSIASSLQLTPLTMSSS 240

Query: 241 SLYPKQNNSSSLQSDQSC-YQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDF 300
           SLYPK NNSSSLQSDQS  YQLHQS+T+PLKQQKR+ESQKTVHRFFDEWPPK+RGSWLDF
Sbjct: 241 SLYPKPNNSSSLQSDQSSFYQLHQSVTEPLKQQKRDESQKTVHRFFDEWPPKDRGSWLDF 300

Query: 301 DDKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
            DK SNTSSVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 ADKPSNTSSVSTTRLSISIPTASNDFPIFRSKNP 334

BLAST of Lsi06G003210 vs. ExPASy TrEMBL
Match: A0A0A0LZJ1 (Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_1G595880 PE=3 SV=1)

HSP 1 Score: 592.8 bits (1527), Expect = 8.8e-166
Identity = 306/334 (91.62%), Postives = 316/334 (94.61%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPP+LLFSIKRS LDS FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPELLFSIKRSALDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
            VGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  PVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTP-NGNGISTKDTNTLLLLEP 180
            KTTATNDINHLSNP FSSLN+NSSLLSYRPFPAHQISSTP NGNGIS KDTNTLLLLEP
Sbjct: 121 LKTTATNDINHLSNPTFSSLNSNSSLLSYRPFPAHQISSTPNNGNGISMKDTNTLLLLEP 180

Query: 181 GSYSNRNPDY--RYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCS 240
           GSYS++NPDY  RYT GLKEEV+E VFFS+EPSEA  R DFSASSIASSLQLTPLTMS S
Sbjct: 181 GSYSDKNPDYRSRYTCGLKEEVNEKVFFSQEPSEAIGRADFSASSIASSLQLTPLTMS-S 240

Query: 241 SLYPKQNNSSSLQSDQSC-YQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDF 300
           SLYPKQNNSSSLQSDQS  YQLHQ+LT+PLKQQKR+ESQKTVHRFFDEWPPK+RGSWLDF
Sbjct: 241 SLYPKQNNSSSLQSDQSSFYQLHQNLTEPLKQQKRDESQKTVHRFFDEWPPKDRGSWLDF 300

Query: 301 DDKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
            DKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 ADKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 333

BLAST of Lsi06G003210 vs. NCBI nr
Match: XP_038878902.1 (growth-regulating factor 1 [Benincasa hispida])

HSP 1 Score: 630.9 bits (1626), Expect = 6.0e-177
Identity = 313/330 (94.85%), Postives = 322/330 (97.58%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MS R+M PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRS LDS FTSK FPHHPQ
Sbjct: 1   MSTRNMLPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSALDSPFTSKPFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180
            KTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG
Sbjct: 121 LKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180

Query: 181 SYSNRNPDYRYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCSSLY 240
           SYS+RNPDYRYTYGLKE+VDEHVFFS+EPSE TARTDFS SSIA+SLQLTPLTMSCSSLY
Sbjct: 181 SYSDRNPDYRYTYGLKEDVDEHVFFSQEPSEVTARTDFS-SSIANSLQLTPLTMSCSSLY 240

Query: 241 PKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFDDKS 300
           PKQNNSSSLQSDQSCYQLHQSLTDPLKQQKR+ESQKT+HRFFDEWPPKERGSWLDF++KS
Sbjct: 241 PKQNNSSSLQSDQSCYQLHQSLTDPLKQQKRDESQKTIHRFFDEWPPKERGSWLDFNNKS 300

Query: 301 SNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
           SNTSSVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 SNTSSVSTTRLSISIPTASNDFPIFRSKNP 329

BLAST of Lsi06G003210 vs. NCBI nr
Match: XP_022147552.1 (growth-regulating factor 6 isoform X3 [Momordica charantia])

HSP 1 Score: 622.1 bits (1603), Expect = 2.8e-174
Identity = 304/330 (92.12%), Postives = 320/330 (96.97%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS+FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180
            KTTATNDINHLSNPAFSSL NNSS+LSYRPFPAHQIS TPNGN IST+DT+TLLLLE G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSNRNPDYRYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCSSLY 240
           SYS+RNPDYRYTYGL+E+VDEHVFFS+EPSE T+RTDFSASS+A SLQLTPL+MSCSSLY
Sbjct: 181 SYSDRNPDYRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCSSLY 240

Query: 241 PKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFDDKS 300
           PKQNN SSLQ+DQSCYQ+H+SLTDPLKQQKR+ESQKTVHRFFDEWPPKERGSWLDFDDK+
Sbjct: 241 PKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFDDKT 300

Query: 301 SNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
           SN  SVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 SNNGSVSTTRLSISIPTASNDFPIFRSKNP 330

BLAST of Lsi06G003210 vs. NCBI nr
Match: XP_022147551.1 (growth-regulating factor 6 isoform X2 [Momordica charantia])

HSP 1 Score: 617.1 bits (1590), Expect = 9.0e-173
Identity = 304/332 (91.57%), Postives = 320/332 (96.39%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS+FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180
            KTTATNDINHLSNPAFSSL NNSS+LSYRPFPAHQIS TPNGN IST+DT+TLLLLE G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSNRNPDY--RYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCSS 240
           SYS+RNPDY  RYTYGL+E+VDEHVFFS+EPSE T+RTDFSASS+A SLQLTPL+MSCSS
Sbjct: 181 SYSDRNPDYRSRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCSS 240

Query: 241 LYPKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFDD 300
           LYPKQNN SSLQ+DQSCYQ+H+SLTDPLKQQKR+ESQKTVHRFFDEWPPKERGSWLDFDD
Sbjct: 241 LYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFDD 300

Query: 301 KSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
           K+SN  SVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 KTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 332

BLAST of Lsi06G003210 vs. NCBI nr
Match: XP_022147550.1 (growth-regulating factor 6 isoform X1 [Momordica charantia])

HSP 1 Score: 616.7 bits (1589), Expect = 1.2e-172
Identity = 304/333 (91.29%), Postives = 320/333 (96.10%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDS+FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSSFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
           HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPG 180
            KTTATNDINHLSNPAFSSL NNSS+LSYRPFPAHQIS TPNGN IST+DT+TLLLLE G
Sbjct: 121 LKTTATNDINHLSNPAFSSLTNNSSMLSYRPFPAHQISLTPNGNAISTQDTSTLLLLESG 180

Query: 181 SYSNRNPDY---RYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCS 240
           SYS+RNPDY   RYTYGL+E+VDEHVFFS+EPSE T+RTDFSASS+A SLQLTPL+MSCS
Sbjct: 181 SYSDRNPDYRRSRYTYGLREDVDEHVFFSQEPSETTSRTDFSASSMADSLQLTPLSMSCS 240

Query: 241 SLYPKQNNSSSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFD 300
           SLYPKQNN SSLQ+DQSCYQ+H+SLTDPLKQQKR+ESQKTVHRFFDEWPPKERGSWLDFD
Sbjct: 241 SLYPKQNNCSSLQNDQSCYQIHESLTDPLKQQKRDESQKTVHRFFDEWPPKERGSWLDFD 300

Query: 301 DKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
           DK+SN  SVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 DKTSNNGSVSTTRLSISIPTASNDFPIFRSKNP 333

BLAST of Lsi06G003210 vs. NCBI nr
Match: XP_008450915.1 (PREDICTED: growth-regulating factor 4 [Cucumis melo])

HSP 1 Score: 598.6 bits (1542), Expect = 3.3e-167
Identity = 306/334 (91.62%), Postives = 316/334 (94.61%), Query Frame = 0

Query: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQ 60
           MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPP+LLFSIKRS LDS FTSKLFPHHPQ
Sbjct: 1   MSARSMFPFTSAQWQELEHQALIFKYMVSGIPIPPELLFSIKRSALDSPFTSKLFPHHPQ 60

Query: 61  HVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120
            VGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV
Sbjct: 61  PVGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV 120

Query: 121 SKTTATNDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTP-NGNGISTKDTNTLLLLEP 180
            KTTATN+INHLSNP FSSLN+NSSLLSYRPFPAHQISSTP NGNGIS KDTNTLLLLEP
Sbjct: 121 LKTTATNEINHLSNPTFSSLNSNSSLLSYRPFPAHQISSTPNNGNGISIKDTNTLLLLEP 180

Query: 181 GSYSNRNPDY--RYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCS 240
           GSYS++NPDY  RYTYGLKEEVDE VFFS+EPSEAT R DFSASSIASSLQLTPLTMS S
Sbjct: 181 GSYSDKNPDYRSRYTYGLKEEVDEKVFFSQEPSEATGRADFSASSIASSLQLTPLTMSSS 240

Query: 241 SLYPKQNNSSSLQSDQSC-YQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDF 300
           SLYPK NNSSSLQSDQS  YQLHQS+T+PLKQQKR+ESQKTVHRFFDEWPPK+RGSWLDF
Sbjct: 241 SLYPKPNNSSSLQSDQSSFYQLHQSVTEPLKQQKRDESQKTVHRFFDEWPPKDRGSWLDF 300

Query: 301 DDKSSNTSSVSTTRLSISIPTASNDFPIFRSKNP 331
            DK SNTSSVSTTRLSISIPTASNDFPIFRSKNP
Sbjct: 301 ADKPSNTSSVSTTRLSISIPTASNDFPIFRSKNP 334

BLAST of Lsi06G003210 vs. TAIR 10
Match: AT3G13960.1 (growth-regulating factor 5 )

HSP 1 Score: 197.2 bits (500), Expect = 2.1e-50
Identity = 99/178 (55.62%), Postives = 129/178 (72.47%), Query Frame = 0

Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHPQHVGWNYL 67
           PFT  QW+ELEHQALI+KYMVSG+P+PP+L+FSI+RS LD++  S+L PH  Q +GW   
Sbjct: 16  PFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRS-LDTSLVSRLLPH--QSLGWGCY 75

Query: 68  QMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVSKTTATN 127
           QM  GRK DPEPGRCRRTDGKKWRCS+EAYPDSKYCE+HMHRG+NR+RK +D ++TT T 
Sbjct: 76  QMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSKYCEKHMHRGRNRARKSLDQNQTTTT- 135

Query: 128 DINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPGSYSNR 186
               L++P+ S  NNN+        P+  +SS+ + N  ST  + +   ++  S SNR
Sbjct: 136 ---PLTSPSLSFTNNNN--------PSPTLSSSSSSNSSSTTYSASSSSMDAYSNSNR 178

BLAST of Lsi06G003210 vs. TAIR 10
Match: AT2G06200.1 (growth-regulating factor 6 )

HSP 1 Score: 163.7 bits (413), Expect = 2.5e-40
Identity = 77/118 (65.25%), Postives = 90/118 (76.27%), Query Frame = 0

Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKR------STLDSTFTSKLFPHHPQH 67
           PFT +QW+ELE+QAL+FKY+ + +P+PP LLF IKR      S+  S+ +S   P    H
Sbjct: 6   PFTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFLFSSSSSSSSSSSFFSPTLSPH 65

Query: 68  VGWNYLQMSLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR--SRKP 118
            GWN  +M +GRKID EPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR  SRKP
Sbjct: 66  FGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSSSRKP 123

BLAST of Lsi06G003210 vs. TAIR 10
Match: AT2G36400.1 (growth-regulating factor 3 )

HSP 1 Score: 136.3 bits (342), Expect = 4.3e-32
Identity = 112/314 (35.67%), Postives = 152/314 (48.41%), Query Frame = 0

Query: 9   FTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPHHP-QHVGWNYL 68
           F+ AQWQELE QALI++YM++G  +P +LL  IK+S L    +   F HHP QH+     
Sbjct: 77  FSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLH--LSPSYFLHHPLQHLPHYQP 136

Query: 69  QMSLGR-KIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVSKTTAT 128
              LGR  +DPEPGRCRRTDGKKWRCS++ +   KYCERHMHRG+NRSRKPV+   T   
Sbjct: 137 AWYLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHKYCERHMHRGRNRSRKPVETPTTVNA 196

Query: 129 NDINHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGISTKDTNTLLLLEPGSYSNRN 188
              +  S+ A ++    ++  S   F     S    G G S                   
Sbjct: 197 TATSMASSVAAAATTTTATTTSTFAFGGGGGSEEVVGQGGS------------------- 256

Query: 189 PDYRYTYGLKEEVDEHVFFSKEPSEATARTDFSASSIASSLQLTPLTMSCSSLYPKQNNS 248
                            FF            FS SS +SS +L  L+ SCS +  + NN 
Sbjct: 257 -----------------FF------------FSGSSNSSS-ELLHLSQSCSEMKQESNN- 316

Query: 249 SSLQSDQSCYQLHQSLTDPLKQQKREESQKTVHRFFDEWPPKERGSWLDFDDKSSNTSSV 308
               +++  Y+ H   ++      R +    +  FFD+WP   R S  + D+ SS  S  
Sbjct: 317 ---MNNKRPYESHIGFSN-----NRSDGGHILRPFFDDWP---RSSLQEADNSSSPMS-- 325

Query: 309 STTRLSISIPTASN 321
           S T LSIS+P  S+
Sbjct: 377 SATCLSISMPGNSS 325

BLAST of Lsi06G003210 vs. TAIR 10
Match: AT4G37740.1 (growth-regulating factor 2 )

HSP 1 Score: 132.5 bits (332), Expect = 6.2e-31
Identity = 75/178 (42.13%), Postives = 100/178 (56.18%), Query Frame = 0

Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPH---HPQHVGW 67
           PFT  QW ELE QALI+KY+ + +P+P  LL SIK+S          +P+    P   GW
Sbjct: 164 PFTLTQWAELEQQALIYKYITANVPVPSSLLISIKKS---------FYPYGSLPPSSFGW 223

Query: 68  NYLQMSL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDV--- 127
               +   G  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPV+V   
Sbjct: 224 GTFHLGFAGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEVQSG 283

Query: 128 --------SKTTATND---INHLSNPAFSSLNNNSSLLSYRPFPAHQISSTPNGNGIS 168
                   SK   T     +   +N + +  ++N SL     +      S PN  G+S
Sbjct: 284 QNQTAAAASKAVTTPQQPVVAGNTNRSNARASSNRSLAIGSQYINPSTESLPNNRGVS 332

BLAST of Lsi06G003210 vs. TAIR 10
Match: AT2G22840.1 (growth-regulating factor 1 )

HSP 1 Score: 132.1 bits (331), Expect = 8.1e-31
Identity = 63/124 (50.81%), Postives = 81/124 (65.32%), Query Frame = 0

Query: 8   PFTSAQWQELEHQALIFKYMVSGIPIPPDLLFSIKRSTLDSTFTSKLFPH---HPQHVGW 67
           PF+  QW ELE QALI+KY+ + +P+P  LL S+K+S          FP+    P   GW
Sbjct: 133 PFSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKS---------FFPYGSLPPNSFGW 192

Query: 68  NYLQMSL-GRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVDVSKT 127
               +   G  +DPEPGRCRRTDGKKWRCS++A PD KYCERH++RG++RSRKPV+    
Sbjct: 193 GSFHLGFSGGNMDPEPGRCRRTDGKKWRCSRDAVPDQKYCERHINRGRHRSRKPVEGQNG 247

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8L8A62.9e-4955.62Growth-regulating factor 5 OS=Arabidopsis thaliana OX=3702 GN=GRF5 PE=1 SV=1[more]
A2XA737.1e-4838.54Growth-regulating factor 1 OS=Oryza sativa subsp. indica OX=39946 GN=GRF1 PE=2 S... [more]
Q6AWY81.2e-4738.44Growth-regulating factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF1 PE=3... [more]
Q6ZIK54.3e-4539.28Growth-regulating factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF4 PE=1... [more]
Q6AWY69.7e-4540.96Growth-regulating factor 3 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF3 PE=3... [more]
Match NameE-valueIdentityDescription
A0A6J1D2N61.3e-17492.12Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=... [more]
A0A6J1D2Q24.3e-17391.57Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=... [more]
A0A6J1D0G45.7e-17391.29Growth-regulating factor OS=Momordica charantia OX=3673 GN=LOC111016450 PE=3 SV=... [more]
A0A1S3BQB11.6e-16791.62Growth-regulating factor OS=Cucumis melo OX=3656 GN=LOC103492362 PE=3 SV=1[more]
A0A0A0LZJ18.8e-16691.62Growth-regulating factor OS=Cucumis sativus OX=3659 GN=Csa_1G595880 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_038878902.16.0e-17794.85growth-regulating factor 1 [Benincasa hispida][more]
XP_022147552.12.8e-17492.12growth-regulating factor 6 isoform X3 [Momordica charantia][more]
XP_022147551.19.0e-17391.57growth-regulating factor 6 isoform X2 [Momordica charantia][more]
XP_022147550.11.2e-17291.29growth-regulating factor 6 isoform X1 [Momordica charantia][more]
XP_008450915.13.3e-16791.62PREDICTED: growth-regulating factor 4 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT3G13960.12.1e-5055.62growth-regulating factor 5 [more]
AT2G06200.12.5e-4065.25growth-regulating factor 6 [more]
AT2G36400.14.3e-3235.67growth-regulating factor 3 [more]
AT4G37740.16.2e-3142.13growth-regulating factor 2 [more]
AT2G22840.18.1e-3150.81growth-regulating factor 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014978Glutamine-Leucine-Glutamine, QLQSMARTSM00951QLQ_2coord: 7..43
e-value: 4.0E-12
score: 56.3
IPR014978Glutamine-Leucine-Glutamine, QLQPFAMPF08880QLQcoord: 8..41
e-value: 1.8E-15
score: 56.4
IPR014978Glutamine-Leucine-Glutamine, QLQPROSITEPS51666QLQcoord: 8..43
score: 22.68881
IPR014977WRC domainPFAMPF08879WRCcoord: 77..118
e-value: 1.1E-20
score: 73.0
IPR014977WRC domainPROSITEPS51667WRCcoord: 76..120
score: 24.764948
NoneNo IPR availablePANTHERPTHR31602:SF46GROWTH-REGULATING FACTOR 6coord: 5..318
IPR031137Growth-regulating factorPANTHERPTHR31602FAMILY NOT NAMEDcoord: 5..318

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G003210.1Lsi06G003210.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0099402 plant organ development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0032502 developmental process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding