Lsi06G002700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G002700
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Cytidine deaminase
Location	chr06: 3057955 .. 3058851 (+)
RNA-Seq Expression	Lsi06G002700
Synteny	Lsi06G002700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGGACCTAGATTCGTAATCGAAGCACCAGAAGCCGAATCCATGGCCAAACAATCGGGCCTCACAATTCCTCTGCTCCTTCCATCTTTGGTCAAATCGGCGCAAAGCCTAGCCCGGCCGCCGATCTCGAAATACCACGTCGGCGCTGTCGGTCTCGGATCCTCCGGGAGAGTGTTCTTCGGCGTCAATCTCGAATTCCCCGGTCTTCCTCTTCATCAATCTGTTCACGCCGAACAATTTCTCGTCACAAATCTCGCCCGAAACGGTGAATCTCACCTCAATTACCTTGCCGTATCCGCCGCCCCTTGCGGCCATTGCCGCCAATTCCTCCAAGAAGTTCGCTCCGCCGCCGAGATCAAAATCCTCGTCTCTGAATCCGATTCCAAATCAAACGATTACGTTCCTCTCCCCCAATTTCTCCCTCACCGATTCGGCCCTTATGACCTTCTCAATAAGGACGTTCCATTACTCCTCGAGCCCCGATTTAACGGCCTGTCTTTACCGAACGAATCCACCGGAAATGAGAAGCTCTGTAATGGCACTCACGGCGAGAATTTGGAGAAACTCAAACGCGCCGCCTTAGATGCCGCGAATATGTCCCACGCGCCGTACAGTAAATGTCCATCGGGAGTTGCGTTGATGGACGACAATGGACGAATCTACAATGGATCGTACATGGAATCGGCTGCATATAATCCGAGTATGGGGCCGGTGCAGGCGGCGATAGTGTCGTACATCGCCGGCGGCGGTGGCGGGTATGAGAAAATCGTCGCCGCCGTGTTGGTGGAGAAGGAGGGCGTGTTAGTGAAGCAAGAACACGTGGCGAGGCTGTTACTGCAGACGATCTCGCCGGAGTGTGAATTTAGGGTGGTTCATTGTACCGCCGCCGTGTGA

mRNA sequence

ATGGACGGACCTAGATTCGTAATCGAAGCACCAGAAGCCGAATCCATGGCCAAACAATCGGGCCTCACAATTCCTCTGCTCCTTCCATCTTTGGTCAAATCGGCGCAAAGCCTAGCCCGGCCGCCGATCTCGAAATACCACGTCGGCGCTGTCGGTCTCGGATCCTCCGGGAGAGTGTTCTTCGGCGTCAATCTCGAATTCCCCGGTCTTCCTCTTCATCAATCTGTTCACGCCGAACAATTTCTCGTCACAAATCTCGCCCGAAACGGTGAATCTCACCTCAATTACCTTGCCGTATCCGCCGCCCCTTGCGGCCATTGCCGCCAATTCCTCCAAGAAGTTCGCTCCGCCGCCGAGATCAAAATCCTCGTCTCTGAATCCGATTCCAAATCAAACGATTACGTTCCTCTCCCCCAATTTCTCCCTCACCGATTCGGCCCTTATGACCTTCTCAATAAGGACGTTCCATTACTCCTCGAGCCCCGATTTAACGGCCTGTCTTTACCGAACGAATCCACCGGAAATGAGAAGCTCTGTAATGGCACTCACGGCGAGAATTTGGAGAAACTCAAACGCGCCGCCTTAGATGCCGCGAATATGTCCCACGCGCCGTACAGTAAATGTCCATCGGGAGTTGCGTTGATGGACGACAATGGACGAATCTACAATGGATCGTACATGGAATCGGCTGCATATAATCCGAGTATGGGGCCGGTGCAGGCGGCGATAGTGTCGTACATCGCCGGCGGCGGTGGCGGGTATGAGAAAATCGTCGCCGCCGTGTTGGTGGAGAAGGAGGGCGTGTTAGTGAAGCAAGAACACGTGGCGAGGCTGTTACTGCAGACGATCTCGCCGGAGTGTGAATTTAGGGTGGTTCATTGTACCGCCGCCGTGTGA

Coding sequence (CDS)

ATGGACGGACCTAGATTCGTAATCGAAGCACCAGAAGCCGAATCCATGGCCAAACAATCGGGCCTCACAATTCCTCTGCTCCTTCCATCTTTGGTCAAATCGGCGCAAAGCCTAGCCCGGCCGCCGATCTCGAAATACCACGTCGGCGCTGTCGGTCTCGGATCCTCCGGGAGAGTGTTCTTCGGCGTCAATCTCGAATTCCCCGGTCTTCCTCTTCATCAATCTGTTCACGCCGAACAATTTCTCGTCACAAATCTCGCCCGAAACGGTGAATCTCACCTCAATTACCTTGCCGTATCCGCCGCCCCTTGCGGCCATTGCCGCCAATTCCTCCAAGAAGTTCGCTCCGCCGCCGAGATCAAAATCCTCGTCTCTGAATCCGATTCCAAATCAAACGATTACGTTCCTCTCCCCCAATTTCTCCCTCACCGATTCGGCCCTTATGACCTTCTCAATAAGGACGTTCCATTACTCCTCGAGCCCCGATTTAACGGCCTGTCTTTACCGAACGAATCCACCGGAAATGAGAAGCTCTGTAATGGCACTCACGGCGAGAATTTGGAGAAACTCAAACGCGCCGCCTTAGATGCCGCGAATATGTCCCACGCGCCGTACAGTAAATGTCCATCGGGAGTTGCGTTGATGGACGACAATGGACGAATCTACAATGGATCGTACATGGAATCGGCTGCATATAATCCGAGTATGGGGCCGGTGCAGGCGGCGATAGTGTCGTACATCGCCGGCGGCGGTGGCGGGTATGAGAAAATCGTCGCCGCCGTGTTGGTGGAGAAGGAGGGCGTGTTAGTGAAGCAAGAACACGTGGCGAGGCTGTTACTGCAGACGATCTCGCCGGAGTGTGAATTTAGGGTGGTTCATTGTACCGCCGCCGTGTGA

Protein sequence

MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEIKILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKLCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGPVQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAAV

Homology

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BLAST of Lsi06G002700 vs. ExPASy Swiss-Prot
Match: O65896 (Cytidine deaminase 1 OS=Arabidopsis thaliana OX=3702 GN=CDA1 PE=1 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 2.7e-102
Identity = 195/306 (63.73%), Postives = 234/306 (76.47%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MD P FVI++ EAES AKQ G+++  LLPSLVK AQS AR PISK++V  VGLGSSGR+F
Sbjct: 1   MDKPSFVIQSKEAESAAKQLGVSVIQLLPSLVKPAQSYARTPISKFNVAVVGLGSSGRIF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
            GVN+EFP LPLH S+HAEQFLVTNL  NGE HLN+ AVSAAPCGHCRQFLQE+R A EI
Sbjct: 61  LGVNVEFPNLPLHHSIHAEQFLVTNLTLNGERHLNFFAVSAAPCGHCRQFLQEIRDAPEI 120

Query: 121 KILV--------SESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNES 180
           KIL+        S+S + S+ ++ L  FLPHRFGP DLL KD PLLLE   N L +    
Sbjct: 121 KILITDPNNSADSDSAADSDGFLRLGSFLPHRFGPDDLLGKDHPLLLESHDNHLKI---- 180

Query: 181 TGNEKLCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAY 240
           +  + +CNG    + + LK+ AL AAN S+APYS CPSGV+L+D +G++Y G YMESAAY
Sbjct: 181 SDLDSICNGNTDSSAD-LKQTALAAANRSYAPYSLCPSGVSLVDCDGKVYRGWYMESAAY 240

Query: 241 NPSMGPVQAAIVSYIA-GGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRV 298
           NPSMGPVQAA+V Y+A GGGGGYE+IV AVLVEKE  +V+QEH ARLLL+TISP+CEF+V
Sbjct: 241 NPSMGPVQAALVDYVANGGGGGYERIVGAVLVEKEDAVVRQEHTARLLLETISPKCEFKV 300

[Close]

BLAST of Lsi06G002700 vs. ExPASy Swiss-Prot
Match: Q9SU87 (Cytidine deaminase 7 OS=Arabidopsis thaliana OX=3702 GN=CDA7 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.4e-72
Identity = 156/303 (51.49%), Postives = 194/303 (64.03%), Query Frame = 0


Query: 2   DGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFF 61
           D  +FV  A EA S     G+T P+ LP L++ A SLAR PISKY VGAVG  SSGRV+ 
Sbjct: 5   DKYKFVFTAKEAAS----EGVTEPIRLPKLIRKAMSLARGPISKYKVGAVGRASSGRVYL 64

Query: 62  GVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVS--------AAPCGHCRQFLQE 121
           GVN+EFPGLPLH S+H EQFLVTNLA N E  L  LAV+         APCG+CRQFL E
Sbjct: 65  GVNVEFPGLPLHHSIHPEQFLVTNLALNSEKGLRQLAVAISSDCIEFGAPCGNCRQFLME 124

Query: 122 VRSAAEIKILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNEST 181
             +  +IKIL+         +  L   LP+RF P D+L K  PLLLE R N L+L   S 
Sbjct: 125 TSNELDIKILLKSKHEAEGSFSSLKLLLPYRFTPDDVLPKGSPLLLEKRDNCLTL---SG 184

Query: 182 GNEKLCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYN 241
             E++C+     +   LK  AL AAN S +PY++ PSGVAL DD G+ Y G Y+ES AY+
Sbjct: 185 STEEICS----SDCSHLKCKALAAANNSFSPYTESPSGVALQDDEGKWYRGWYIESVAYS 244

Query: 242 PSMGPVQAAIVSYIA-GGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTI-SPECEFRV 295
           PS+GPVQAA+V ++A   G G+ KIV AVLVEK    V QE  A+++L TI +P C+F+V
Sbjct: 245 PSLGPVQAALVDFVARSRGKGFNKIVEAVLVEKNNARVSQERTAKMILDTIAAPNCDFKV 296

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BLAST of Lsi06G002700 vs. ExPASy Swiss-Prot
Match: Q9SU86 (Cytidine deaminase 6 OS=Arabidopsis thaliana OX=3702 GN=CDA6 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 7.8e-70
Identity = 146/287 (50.87%), Postives = 189/287 (65.85%), Query Frame = 0


Query: 15  SMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHQ 74
           S A + G+  P  LP L+  A SLAR P+S + VGAVGL SSG VF GVN+EFP LPLH 
Sbjct: 8   SEAAEEGVRGPSDLPKLIDKAMSLARAPVSTFKVGAVGLTSSGEVFLGVNVEFPNLPLHH 67

Query: 75  SVHAEQFLVTNLARNGESHLNYLAVS------AAPCGHCRQFLQEVRSAAEIKILVSESD 134
           ++HAEQFLVTNLA N    L ++AVS       APCGHCRQF QE+R+A EI+IL+    
Sbjct: 68  TIHAEQFLVTNLALNSMKKLTHIAVSVTGTIFGAPCGHCRQFYQEMRNAPEIEILIKRPK 127

Query: 135 SKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKLCNGTHGENLE 194
              ++++ L   +P RFGP  +L +D  LLLE R N L L +     E++C+    E+  
Sbjct: 128 DGIDEFMSLKSLMPERFGPDSILPEDASLLLEQRDNSLVLSDP----EEICSDP--EDCS 187

Query: 195 KLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGPVQAAIVSYIA 254
             K  AL AAN S+APYSKCPSGVAL+   G +Y G Y+ES AYNPS+GPV+AA+V ++A
Sbjct: 188 HTKCRALAAANKSYAPYSKCPSGVALI-CGGEVYKGWYIESVAYNPSLGPVEAALVDFVA 247

Query: 255 -GGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHC 295
            GGG  + +I   VLVE + V V QE  AR  L  I+P+C+F+V+HC
Sbjct: 248 RGGGKEFNEITEVVLVEMKDVKVSQEATARTFLDKIAPKCDFKVLHC 287

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BLAST of Lsi06G002700 vs. ExPASy Swiss-Prot
Match: O65571 (Cytidine deaminase 2 OS=Arabidopsis thaliana OX=3702 GN=CDA2 PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 3.2e-63
Identity = 146/304 (48.03%), Postives = 192/304 (63.16%), Query Frame = 0


Query: 5   RFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVN 64
           +FV  A E    A   G+T P+ LP+L++ A  LAR PISKY VGAVG  SSGRV+ GVN
Sbjct: 29  KFVFTANE----AALEGVTDPIRLPNLIRKAMCLARAPISKYKVGAVGRASSGRVYLGVN 88

Query: 65  LEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVS--------AAPCGHCRQFLQEVRS 124
           ++FPGLPLH S+HAEQFLVTNLA N E  L  LAV+          PCG+C QFL E+ +
Sbjct: 89  VDFPGLPLHHSIHAEQFLVTNLALNYEKDLCKLAVAISTDGLEFGTPCGNCLQFLMEMSN 148

Query: 125 AAEIKILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNE 184
           A ++KIL S+   ++  +  L   LP      ++L K  P LLE R+N L+L        
Sbjct: 149 ALDMKIL-SKPKHEAGSFSSLRLLLP------NVLPKGSPFLLEKRYNCLTL-------- 208

Query: 185 KLCNGTHGE----NLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAY 244
              +G+ GE    +   LKR AL AAN S +PY++ PSGVAL+D++G  Y G Y+ES A 
Sbjct: 209 ---SGSAGEICSLDCSHLKRRALAAANNSFSPYTESPSGVALLDNDGNWYRGWYIESVAS 268

Query: 245 NPSMGPVQAAIVSYIAGGGGG-YEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRV 296
           NPS+GPVQAA+V ++A   G  + KIV AVLVEK    V QE  A+++L TI+P C+F+V
Sbjct: 269 NPSLGPVQAALVDFVARSRGKMFNKIVQAVLVEKNNASVSQERTAKIILDTIAPNCDFKV 310

[Close]

BLAST of Lsi06G002700 vs. ExPASy Swiss-Prot
Match: Q9XEX4 (Cytidine deaminase 8 OS=Arabidopsis thaliana OX=3702 GN=CDA8 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.2e-56
Identity = 134/298 (44.97%), Postives = 181/298 (60.74%), Query Frame = 0


Query: 5   RFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVN 64
           RF++   E ES     G   P  L  L+  A    R  IS   V AVG GSSGR FFGVN
Sbjct: 6   RFMLNHIETESY----GAFTPQNLSPLINRAIPHTRAQISGSPVVAVGRGSSGRTFFGVN 65

Query: 65  LEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSA------APCGHCRQFLQEVRSAA 124
           +E PGLPL  S+HAEQFL+ NLA + E  L  +A+S        PCGHC Q L ++R  +
Sbjct: 66  VELPGLPLDHSIHAEQFLLANLALHFEQKLECIAISTNGYYFQEPCGHCCQLLHKIRDMS 125

Query: 125 EIKILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKL 184
           + KIL++    +   Y+ L  FLP       +   +VP LLE  FN + L N S   + +
Sbjct: 126 DTKILLTNPTGQKGTYMNLSTFLPQGL----ISQANVPRLLERNFNCIELINHSLYMD-I 185

Query: 185 CNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGP 244
           C  ++ E+   L   AL AA +S+AP SKCPSGVAL+D  G++Y+G YMES A+N S+GP
Sbjct: 186 C--SYSEHCNHLNCRALKAATISYAPDSKCPSGVALIDHRGKVYSGGYMESVAHNTSLGP 245

Query: 245 VQAAIVSYIAGGGG-GYEKIVAAVLVEKEGVLVKQEHVARLLLQTIS-PECEFRVVHC 295
           VQAA+V ++A G G  ++ IV AVLVEK+  ++ QE  AR++L+ I+ P+C FRV+HC
Sbjct: 246 VQAALVDFVANGDGQEFKNIVEAVLVEKKCGVLSQEATARMILEKIADPDCIFRVLHC 292

[Close]

BLAST of Lsi06G002700 vs. ExPASy TrEMBL
Match: A0A5D3CE07 (Cytidine deaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G002450 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 274/300 (91.33%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDGPRFVIEA EAE++AKQS LTIPLLLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGPRFVIEASEAETLAKQSALTIPLLLPTLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLHQSVHAEQFLVTNLA N ESHLNYLAVSAAPCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLALNAESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVSE--SDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKL 180
           KILVS+  SDSK NDYVPLPQFLPHRFGPYDLL KDVPLLLEPRFNGLSLPNES GN KL
Sbjct: 121 KILVSDSGSDSKPNDYVPLPQFLPHRFGPYDLLAKDVPLLLEPRFNGLSLPNESAGNNKL 180

Query: 181 CNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGP 240
           CNG HGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNG YMESAAYNPSMGP
Sbjct: 181 CNGNHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGPYMESAAYNPSMGP 240

Query: 241 VQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAAV 299
           VQAAIV+YIAGGG GYE+IVAAVLVEK+GV VKQE  ARLLL+TISPECEF VVHC AAV
Sbjct: 241 VQAAIVAYIAGGGAGYERIVAAVLVEKDGVEVKQERAARLLLETISPECEFTVVHCIAAV 300

[Close]

BLAST of Lsi06G002700 vs. ExPASy TrEMBL
Match: A0A1S3BQV2 (Cytidine deaminase OS=Cucumis melo OX=3656 GN=LOC103492314 PE=3 SV=1)

HSP 1 Score: 542.3 bits (1396), Expect = 1.2e-150
Identity = 274/300 (91.33%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDGPRFVIEA EAE++AKQS LTIPLLLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGPRFVIEASEAETLAKQSALTIPLLLPTLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLHQSVHAEQFLVTNLA N ESHLNYLAVSAAPCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLALNAESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVSE--SDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKL 180
           KILVS+  SDSK NDYVPLPQFLPHRFGPYDLL KDVPLLLEPRFNGLSLPNES GN KL
Sbjct: 121 KILVSDSGSDSKPNDYVPLPQFLPHRFGPYDLLAKDVPLLLEPRFNGLSLPNESAGNNKL 180

Query: 181 CNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGP 240
           CNG HGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNG YMESAAYNPSMGP
Sbjct: 181 CNGNHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGPYMESAAYNPSMGP 240

Query: 241 VQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAAV 299
           VQAAIV+YIAGGG GYE+IVAAVLVEK+GV VKQE  ARLLL+TISPECEF VVHC AAV
Sbjct: 241 VQAAIVAYIAGGGAGYERIVAAVLVEKDGVEVKQERAARLLLETISPECEFTVVHCIAAV 300

[Close]

BLAST of Lsi06G002700 vs. ExPASy TrEMBL
Match: A0A6J1JFD6 (Cytidine deaminase OS=Cucurbita maxima OX=3661 GN=LOC111485242 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.5e-148
Identity = 271/301 (90.03%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDGPRFVIEA EAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGPRFVIEASEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLH SVHAEQFLVTN A N ESHLN+LAVSAAPCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHHSVHAEQFLVTNFALNAESHLNFLAVSAAPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVS---ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEK 180
           KILVS   ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSL +ES GN  
Sbjct: 121 KILVSSIEESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLSDESAGNHT 180

Query: 181 LCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMG 240
           LCNG HG + EKLKRAALDAANMSHAPYS+CPSGVALMD +G+IY GSYMESAAYNPSMG
Sbjct: 181 LCNGAHGSDWEKLKRAALDAANMSHAPYSRCPSGVALMDADGQIYKGSYMESAAYNPSMG 240

Query: 241 PVQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAA 299
           PVQ AIVSY+AGGGGGYE+IVAAVLVEK+GV VKQEH ARLLLQTISPECEFRVVHC AA
Sbjct: 241 PVQTAIVSYVAGGGGGYERIVAAVLVEKDGVDVKQEHTARLLLQTISPECEFRVVHCVAA 300

[Close]

BLAST of Lsi06G002700 vs. ExPASy TrEMBL
Match: A0A0A0LYU5 (Cytidine deaminase OS=Cucumis sativus OX=3659 GN=Csa_1G587400 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 6.3e-147
Identity = 269/304 (88.49%), Postives = 280/304 (92.11%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDG RFVIEAPEAES+AKQS LTIPLLLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGTRFVIEAPEAESLAKQSALTIPLLLPTLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLHQSVHAEQFLVTNLA N ESHLNYLAVSAAPCGHCRQFLQEVRS+A+I
Sbjct: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLALNAESHLNYLAVSAAPCGHCRQFLQEVRSSADI 120

Query: 121 KILVSE------SDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTG 180
           KILVS+      SDSK + YVPLPQFLPHRFGPYDLL KDVPLLLEPRFNGLSLPNE+  
Sbjct: 121 KILVSDSGSDSGSDSKPDVYVPLPQFLPHRFGPYDLLAKDVPLLLEPRFNGLSLPNETAE 180

Query: 181 NEKLCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNP 240
           N KLCNG HGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNG YMESAAYNP
Sbjct: 181 NNKLCNGNHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGPYMESAAYNP 240

Query: 241 SMGPVQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHC 299
           SMGPVQAAIV+YIAGGG GYE+IVAAVLVEK+GV VKQE  ARLLL+TISPECEF VVHC
Sbjct: 241 SMGPVQAAIVAYIAGGGAGYERIVAAVLVEKDGVEVKQERAARLLLETISPECEFTVVHC 300

[Close]

BLAST of Lsi06G002700 vs. ExPASy TrEMBL
Match: A0A6J1HAV6 (Cytidine deaminase OS=Cucurbita moschata OX=3662 GN=LOC111461704 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.4e-146
Identity = 268/301 (89.04%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDGPRFVIEA EAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGPRFVIEASEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLH SVHAEQFLVTN A N ES LN+LAVSAAPCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHHSVHAEQFLVTNFALNAESQLNFLAVSAAPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVS---ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEK 180
           KILVS   ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSL +ES  N  
Sbjct: 121 KILVSSIEESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLSDESAENHT 180

Query: 181 LCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMG 240
           LCNG HG + EKLKRAALDAANMSHAPYS+CPSGVAL+D +G+IY GSYMESAAYNPSMG
Sbjct: 181 LCNGAHGSDWEKLKRAALDAANMSHAPYSRCPSGVALIDTDGQIYKGSYMESAAYNPSMG 240

Query: 241 PVQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAA 299
           PVQ AIVSY+AGGGGGYE+IVAAVLVEK+GV VKQEH ARLLLQTISPECEFRVVHC AA
Sbjct: 241 PVQTAIVSYVAGGGGGYERIVAAVLVEKDGVDVKQEHTARLLLQTISPECEFRVVHCVAA 300

[Close]

BLAST of Lsi06G002700 vs. NCBI nr
Match: XP_008450845.1 (PREDICTED: cytidine deaminase 1-like [Cucumis melo] >TYK10103.1 cytidine deaminase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 542.3 bits (1396), Expect = 2.5e-150
Identity = 274/300 (91.33%), Postives = 282/300 (94.00%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDGPRFVIEA EAE++AKQS LTIPLLLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGPRFVIEASEAETLAKQSALTIPLLLPTLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLHQSVHAEQFLVTNLA N ESHLNYLAVSAAPCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLALNAESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVSE--SDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKL 180
           KILVS+  SDSK NDYVPLPQFLPHRFGPYDLL KDVPLLLEPRFNGLSLPNES GN KL
Sbjct: 121 KILVSDSGSDSKPNDYVPLPQFLPHRFGPYDLLAKDVPLLLEPRFNGLSLPNESAGNNKL 180

Query: 181 CNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGP 240
           CNG HGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNG YMESAAYNPSMGP
Sbjct: 181 CNGNHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGPYMESAAYNPSMGP 240

Query: 241 VQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAAV 299
           VQAAIV+YIAGGG GYE+IVAAVLVEK+GV VKQE  ARLLL+TISPECEF VVHC AAV
Sbjct: 241 VQAAIVAYIAGGGAGYERIVAAVLVEKDGVEVKQERAARLLLETISPECEFTVVHCIAAV 300

[Close]

BLAST of Lsi06G002700 vs. NCBI nr
Match: XP_038878430.1 (cytidine deaminase 1-like [Benincasa hispida])

HSP 1 Score: 542.0 bits (1395), Expect = 3.3e-150
Identity = 275/298 (92.28%), Postives = 283/298 (94.97%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDG RFVIEAPE ESMAKQSG TIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGCRFVIEAPEVESMAKQSGRTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLHQSVHAEQFLVTNLA NGESHLNYLAVSA PCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLALNGESHLNYLAVSAFPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKLCN 180
           KILVSESDS SNDYVPLPQFLP+RFGP DLL+KDVPLLLEPRFNGL+L NES GNEKLCN
Sbjct: 121 KILVSESDSSSNDYVPLPQFLPNRFGPDDLLDKDVPLLLEPRFNGLTLSNESAGNEKLCN 180

Query: 181 GTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGPVQ 240
           GTHG +LEKLKRAALDAANMSHAPYSKCPSGVALMD+NGRIYNGSYMESAAYNPSMGPVQ
Sbjct: 181 GTHGGDLEKLKRAALDAANMSHAPYSKCPSGVALMDNNGRIYNGSYMESAAYNPSMGPVQ 240

Query: 241 AAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAAV 299
           AAIVSYIAGGGG YE+IVAAVLVEK+GV VKQE  ARLLL+TISPECEFRVVHC AAV
Sbjct: 241 AAIVSYIAGGGGEYERIVAAVLVEKDGVEVKQEQAARLLLETISPECEFRVVHCIAAV 298

[Close]

BLAST of Lsi06G002700 vs. NCBI nr
Match: XP_022987806.1 (cytidine deaminase 1-like [Cucurbita maxima])

HSP 1 Score: 535.4 bits (1378), Expect = 3.1e-148
Identity = 271/301 (90.03%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDGPRFVIEA EAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGPRFVIEASEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLH SVHAEQFLVTN A N ESHLN+LAVSAAPCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHHSVHAEQFLVTNFALNAESHLNFLAVSAAPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVS---ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEK 180
           KILVS   ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSL +ES GN  
Sbjct: 121 KILVSSIEESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLSDESAGNHT 180

Query: 181 LCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMG 240
           LCNG HG + EKLKRAALDAANMSHAPYS+CPSGVALMD +G+IY GSYMESAAYNPSMG
Sbjct: 181 LCNGAHGSDWEKLKRAALDAANMSHAPYSRCPSGVALMDADGQIYKGSYMESAAYNPSMG 240

Query: 241 PVQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAA 299
           PVQ AIVSY+AGGGGGYE+IVAAVLVEK+GV VKQEH ARLLLQTISPECEFRVVHC AA
Sbjct: 241 PVQTAIVSYVAGGGGGYERIVAAVLVEKDGVDVKQEHTARLLLQTISPECEFRVVHCVAA 300

[Close]

BLAST of Lsi06G002700 vs. NCBI nr
Match: XP_004135706.1 (cytidine deaminase 1 [Cucumis sativus] >KGN66229.1 hypothetical protein Csa_006974 [Cucumis sativus])

HSP 1 Score: 530.0 bits (1364), Expect = 1.3e-146
Identity = 269/304 (88.49%), Postives = 280/304 (92.11%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDG RFVIEAPEAES+AKQS LTIPLLLP+LVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGTRFVIEAPEAESLAKQSALTIPLLLPTLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLHQSVHAEQFLVTNLA N ESHLNYLAVSAAPCGHCRQFLQEVRS+A+I
Sbjct: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLALNAESHLNYLAVSAAPCGHCRQFLQEVRSSADI 120

Query: 121 KILVSE------SDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTG 180
           KILVS+      SDSK + YVPLPQFLPHRFGPYDLL KDVPLLLEPRFNGLSLPNE+  
Sbjct: 121 KILVSDSGSDSGSDSKPDVYVPLPQFLPHRFGPYDLLAKDVPLLLEPRFNGLSLPNETAE 180

Query: 181 NEKLCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNP 240
           N KLCNG HGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNG YMESAAYNP
Sbjct: 181 NNKLCNGNHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGPYMESAAYNP 240

Query: 241 SMGPVQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHC 299
           SMGPVQAAIV+YIAGGG GYE+IVAAVLVEK+GV VKQE  ARLLL+TISPECEF VVHC
Sbjct: 241 SMGPVQAAIVAYIAGGGAGYERIVAAVLVEKDGVEVKQERAARLLLETISPECEFTVVHC 300

[Close]

BLAST of Lsi06G002700 vs. NCBI nr
Match: XP_022961088.1 (cytidine deaminase 1-like [Cucurbita moschata] >KAG6589990.1 Cytidine deaminase 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 528.1 bits (1359), Expect = 4.9e-146
Identity = 268/301 (89.04%), Postives = 278/301 (92.36%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MDGPRFVIEA EAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF
Sbjct: 1   MDGPRFVIEASEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
           FGVNLEFPGLPLH SVHAEQFLVTN A N ES LN+LAVSAAPCGHCRQFLQEVRSAAEI
Sbjct: 61  FGVNLEFPGLPLHHSVHAEQFLVTNFALNAESQLNFLAVSAAPCGHCRQFLQEVRSAAEI 120

Query: 121 KILVS---ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEK 180
           KILVS   ESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSL +ES  N  
Sbjct: 121 KILVSSIEESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLSDESAENHT 180

Query: 181 LCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMG 240
           LCNG HG + EKLKRAALDAANMSHAPYS+CPSGVAL+D +G+IY GSYMESAAYNPSMG
Sbjct: 181 LCNGAHGSDWEKLKRAALDAANMSHAPYSRCPSGVALIDTDGQIYKGSYMESAAYNPSMG 240

Query: 241 PVQAAIVSYIAGGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHCTAA 299
           PVQ AIVSY+AGGGGGYE+IVAAVLVEK+GV VKQEH ARLLLQTISPECEFRVVHC AA
Sbjct: 241 PVQTAIVSYVAGGGGGYERIVAAVLVEKDGVDVKQEHTARLLLQTISPECEFRVVHCVAA 300

[Close]

BLAST of Lsi06G002700 vs. TAIR 10
Match: AT2G19570.1 (cytidine deaminase 1 )

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-103
Identity = 195/306 (63.73%), Postives = 234/306 (76.47%), Query Frame = 0


Query: 1   MDGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVF 60
           MD P FVI++ EAES AKQ G+++  LLPSLVK AQS AR PISK++V  VGLGSSGR+F
Sbjct: 1   MDKPSFVIQSKEAESAAKQLGVSVIQLLPSLVKPAQSYARTPISKFNVAVVGLGSSGRIF 60

Query: 61  FGVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSAAPCGHCRQFLQEVRSAAEI 120
            GVN+EFP LPLH S+HAEQFLVTNL  NGE HLN+ AVSAAPCGHCRQFLQE+R A EI
Sbjct: 61  LGVNVEFPNLPLHHSIHAEQFLVTNLTLNGERHLNFFAVSAAPCGHCRQFLQEIRDAPEI 120

Query: 121 KILV--------SESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNES 180
           KIL+        S+S + S+ ++ L  FLPHRFGP DLL KD PLLLE   N L +    
Sbjct: 121 KILITDPNNSADSDSAADSDGFLRLGSFLPHRFGPDDLLGKDHPLLLESHDNHLKI---- 180

Query: 181 TGNEKLCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAY 240
           +  + +CNG    + + LK+ AL AAN S+APYS CPSGV+L+D +G++Y G YMESAAY
Sbjct: 181 SDLDSICNGNTDSSAD-LKQTALAAANRSYAPYSLCPSGVSLVDCDGKVYRGWYMESAAY 240

Query: 241 NPSMGPVQAAIVSYIA-GGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRV 298
           NPSMGPVQAA+V Y+A GGGGGYE+IV AVLVEKE  +V+QEH ARLLL+TISP+CEF+V
Sbjct: 241 NPSMGPVQAALVDYVANGGGGGYERIVGAVLVEKEDAVVRQEHTARLLLETISPKCEFKV 300

[Close]

BLAST of Lsi06G002700 vs. TAIR 10
Match: AT4G29600.1 (Cytidine/deoxycytidylate deaminase family protein )

HSP 1 Score: 272.3 bits (695), Expect = 4.5e-73
Identity = 156/303 (51.49%), Postives = 194/303 (64.03%), Query Frame = 0


Query: 2   DGPRFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFF 61
           D  +FV  A EA S     G+T P+ LP L++ A SLAR PISKY VGAVG  SSGRV+ 
Sbjct: 5   DKYKFVFTAKEAAS----EGVTEPIRLPKLIRKAMSLARGPISKYKVGAVGRASSGRVYL 64

Query: 62  GVNLEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVS--------AAPCGHCRQFLQE 121
           GVN+EFPGLPLH S+H EQFLVTNLA N E  L  LAV+         APCG+CRQFL E
Sbjct: 65  GVNVEFPGLPLHHSIHPEQFLVTNLALNSEKGLRQLAVAISSDCIEFGAPCGNCRQFLME 124

Query: 122 VRSAAEIKILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNEST 181
             +  +IKIL+         +  L   LP+RF P D+L K  PLLLE R N L+L   S 
Sbjct: 125 TSNELDIKILLKSKHEAEGSFSSLKLLLPYRFTPDDVLPKGSPLLLEKRDNCLTL---SG 184

Query: 182 GNEKLCNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYN 241
             E++C+     +   LK  AL AAN S +PY++ PSGVAL DD G+ Y G Y+ES AY+
Sbjct: 185 STEEICS----SDCSHLKCKALAAANNSFSPYTESPSGVALQDDEGKWYRGWYIESVAYS 244

Query: 242 PSMGPVQAAIVSYIA-GGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTI-SPECEFRV 295
           PS+GPVQAA+V ++A   G G+ KIV AVLVEK    V QE  A+++L TI +P C+F+V
Sbjct: 245 PSLGPVQAALVDFVARSRGKGFNKIVEAVLVEKNNARVSQERTAKMILDTIAAPNCDFKV 296

[Close]

BLAST of Lsi06G002700 vs. TAIR 10
Match: AT4G29610.1 (Cytidine/deoxycytidylate deaminase family protein )

HSP 1 Score: 265.4 bits (677), Expect = 5.6e-71
Identity = 146/287 (50.87%), Postives = 189/287 (65.85%), Query Frame = 0


Query: 15  SMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVNLEFPGLPLHQ 74
           S A + G+  P  LP L+  A SLAR P+S + VGAVGL SSG VF GVN+EFP LPLH 
Sbjct: 8   SEAAEEGVRGPSDLPKLIDKAMSLARAPVSTFKVGAVGLTSSGEVFLGVNVEFPNLPLHH 67

Query: 75  SVHAEQFLVTNLARNGESHLNYLAVS------AAPCGHCRQFLQEVRSAAEIKILVSESD 134
           ++HAEQFLVTNLA N    L ++AVS       APCGHCRQF QE+R+A EI+IL+    
Sbjct: 68  TIHAEQFLVTNLALNSMKKLTHIAVSVTGTIFGAPCGHCRQFYQEMRNAPEIEILIKRPK 127

Query: 135 SKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKLCNGTHGENLE 194
              ++++ L   +P RFGP  +L +D  LLLE R N L L +     E++C+    E+  
Sbjct: 128 DGIDEFMSLKSLMPERFGPDSILPEDASLLLEQRDNSLVLSDP----EEICSDP--EDCS 187

Query: 195 KLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGPVQAAIVSYIA 254
             K  AL AAN S+APYSKCPSGVAL+   G +Y G Y+ES AYNPS+GPV+AA+V ++A
Sbjct: 188 HTKCRALAAANKSYAPYSKCPSGVALI-CGGEVYKGWYIESVAYNPSLGPVEAALVDFVA 247

Query: 255 -GGGGGYEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRVVHC 295
            GGG  + +I   VLVE + V V QE  AR  L  I+P+C+F+V+HC
Sbjct: 248 RGGGKEFNEITEVVLVEMKDVKVSQEATARTFLDKIAPKCDFKVLHC 287

[Close]

BLAST of Lsi06G002700 vs. TAIR 10
Match: AT4G29620.1 (Cytidine/deoxycytidylate deaminase family protein )

HSP 1 Score: 243.4 bits (620), Expect = 2.3e-64
Identity = 146/304 (48.03%), Postives = 192/304 (63.16%), Query Frame = 0


Query: 5   RFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVN 64
           +FV  A E    A   G+T P+ LP+L++ A  LAR PISKY VGAVG  SSGRV+ GVN
Sbjct: 29  KFVFTANE----AALEGVTDPIRLPNLIRKAMCLARAPISKYKVGAVGRASSGRVYLGVN 88

Query: 65  LEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVS--------AAPCGHCRQFLQEVRS 124
           ++FPGLPLH S+HAEQFLVTNLA N E  L  LAV+          PCG+C QFL E+ +
Sbjct: 89  VDFPGLPLHHSIHAEQFLVTNLALNYEKDLCKLAVAISTDGLEFGTPCGNCLQFLMEMSN 148

Query: 125 AAEIKILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNE 184
           A ++KIL S+   ++  +  L   LP      ++L K  P LLE R+N L+L        
Sbjct: 149 ALDMKIL-SKPKHEAGSFSSLRLLLP------NVLPKGSPFLLEKRYNCLTL-------- 208

Query: 185 KLCNGTHGE----NLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAY 244
              +G+ GE    +   LKR AL AAN S +PY++ PSGVAL+D++G  Y G Y+ES A 
Sbjct: 209 ---SGSAGEICSLDCSHLKRRALAAANNSFSPYTESPSGVALLDNDGNWYRGWYIESVAS 268

Query: 245 NPSMGPVQAAIVSYIAGGGGG-YEKIVAAVLVEKEGVLVKQEHVARLLLQTISPECEFRV 296
           NPS+GPVQAA+V ++A   G  + KIV AVLVEK    V QE  A+++L TI+P C+F+V
Sbjct: 269 NPSLGPVQAALVDFVARSRGKMFNKIVQAVLVEKNNASVSQERTAKIILDTIAPNCDFKV 310

[Close]

BLAST of Lsi06G002700 vs. TAIR 10
Match: AT4G29570.1 (Cytidine/deoxycytidylate deaminase family protein )

HSP 1 Score: 220.7 bits (561), Expect = 1.6e-57
Identity = 134/298 (44.97%), Postives = 181/298 (60.74%), Query Frame = 0


Query: 5   RFVIEAPEAESMAKQSGLTIPLLLPSLVKSAQSLARPPISKYHVGAVGLGSSGRVFFGVN 64
           RF++   E ES     G   P  L  L+  A    R  IS   V AVG GSSGR FFGVN
Sbjct: 6   RFMLNHIETESY----GAFTPQNLSPLINRAIPHTRAQISGSPVVAVGRGSSGRTFFGVN 65

Query: 65  LEFPGLPLHQSVHAEQFLVTNLARNGESHLNYLAVSA------APCGHCRQFLQEVRSAA 124
           +E PGLPL  S+HAEQFL+ NLA + E  L  +A+S        PCGHC Q L ++R  +
Sbjct: 66  VELPGLPLDHSIHAEQFLLANLALHFEQKLECIAISTNGYYFQEPCGHCCQLLHKIRDMS 125

Query: 125 EIKILVSESDSKSNDYVPLPQFLPHRFGPYDLLNKDVPLLLEPRFNGLSLPNESTGNEKL 184
           + KIL++    +   Y+ L  FLP       +   +VP LLE  FN + L N S   + +
Sbjct: 126 DTKILLTNPTGQKGTYMNLSTFLPQGL----ISQANVPRLLERNFNCIELINHSLYMD-I 185

Query: 185 CNGTHGENLEKLKRAALDAANMSHAPYSKCPSGVALMDDNGRIYNGSYMESAAYNPSMGP 244
           C  ++ E+   L   AL AA +S+AP SKCPSGVAL+D  G++Y+G YMES A+N S+GP
Sbjct: 186 C--SYSEHCNHLNCRALKAATISYAPDSKCPSGVALIDHRGKVYSGGYMESVAHNTSLGP 245

Query: 245 VQAAIVSYIAGGGG-GYEKIVAAVLVEKEGVLVKQEHVARLLLQTIS-PECEFRVVHC 295
           VQAA+V ++A G G  ++ IV AVLVEK+  ++ QE  AR++L+ I+ P+C FRV+HC
Sbjct: 246 VQAALVDFVANGDGQEFKNIVEAVLVEKKCGVLSQEATARMILEKIADPDCIFRVLHC 292

The following BLAST results are available for this feature:

BLAST of Lsi06G002700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65896	2.7e-102	63.73	Cytidine deaminase 1 OS=Arabidopsis thaliana OX=3702 GN=CDA1 PE=1 SV=1	[more]
Q9SU87	6.4e-72	51.49	Cytidine deaminase 7 OS=Arabidopsis thaliana OX=3702 GN=CDA7 PE=2 SV=1	[more]
Q9SU86	7.8e-70	50.87	Cytidine deaminase 6 OS=Arabidopsis thaliana OX=3702 GN=CDA6 PE=3 SV=1	[more]
O65571	3.2e-63	48.03	Cytidine deaminase 2 OS=Arabidopsis thaliana OX=3702 GN=CDA2 PE=2 SV=1	[more]
Q9XEX4	2.2e-56	44.97	Cytidine deaminase 8 OS=Arabidopsis thaliana OX=3702 GN=CDA8 PE=3 SV=1	[more]

BLAST of Lsi06G002700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CE07	1.2e-150	91.33	Cytidine deaminase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00...	[more]
A0A1S3BQV2	1.2e-150	91.33	Cytidine deaminase OS=Cucumis melo OX=3656 GN=LOC103492314 PE=3 SV=1	[more]
A0A6J1JFD6	1.5e-148	90.03	Cytidine deaminase OS=Cucurbita maxima OX=3661 GN=LOC111485242 PE=3 SV=1	[more]
A0A0A0LYU5	6.3e-147	88.49	Cytidine deaminase OS=Cucumis sativus OX=3659 GN=Csa_1G587400 PE=3 SV=1	[more]
A0A6J1HAV6	2.4e-146	89.04	Cytidine deaminase OS=Cucurbita moschata OX=3662 GN=LOC111461704 PE=3 SV=1	[more]

BLAST of Lsi06G002700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008450845.1	2.5e-150	91.33	PREDICTED: cytidine deaminase 1-like [Cucumis melo] >TYK10103.1 cytidine deamina...	[more]
XP_038878430.1	3.3e-150	92.28	cytidine deaminase 1-like [Benincasa hispida]	[more]
XP_022987806.1	3.1e-148	90.03	cytidine deaminase 1-like [Cucurbita maxima]	[more]
XP_004135706.1	1.3e-146	88.49	cytidine deaminase 1 [Cucumis sativus] >KGN66229.1 hypothetical protein Csa_0069...	[more]
XP_022961088.1	4.9e-146	89.04	cytidine deaminase 1-like [Cucurbita moschata] >KAG6589990.1 Cytidine deaminase ...	[more]

BLAST of Lsi06G002700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19570.1	1.9e-103	63.73	cytidine deaminase 1	[more]
AT4G29600.1	4.5e-73	51.49	Cytidine/deoxycytidylate deaminase family protein	[more]
AT4G29610.1	5.6e-71	50.87	Cytidine/deoxycytidylate deaminase family protein	[more]
AT4G29620.1	2.3e-64	48.03	Cytidine/deoxycytidylate deaminase family protein	[more]
AT4G29570.1	1.6e-57	44.97	Cytidine/deoxycytidylate deaminase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 5..157 e-value: 1.7E-35 score: 124.2
None	No IPR available	GENE3D	3.40.140.10	Cytidine Deaminase, domain 2	coord: 183..292 e-value: 2.0E-30 score: 107.2
None	No IPR available	PIRSF	PIRSF006334	Cdd_plus_pseudo	coord: 1..297 e-value: 2.7E-104 score: 345.6
None	No IPR available	PANTHER	PTHR11644:SF25	BNAA03G49610D PROTEIN	coord: 131..293 coord: 1..129
None	No IPR available	PANTHER	PTHR11644	CYTIDINE DEAMINASE	coord: 1..129
None	No IPR available	PANTHER	PTHR11644	CYTIDINE DEAMINASE	coord: 131..293
None	No IPR available	CDD	cd01283	cytidine_deaminase	coord: 39..130 e-value: 1.1013E-19 score: 80.463
None	No IPR available	CDD	cd01283	cytidine_deaminase	coord: 192..259 e-value: 1.45892E-9 score: 52.7286
IPR013171	Cytidine/deoxycytidylate deaminase, zinc-binding domain	PFAM	PF08211	dCMP_cyt_deam_2	coord: 138..277 e-value: 6.1E-51 score: 172.1
IPR006263	Cytidine deaminase, homodimeric	TIGRFAM	TIGR01355	TIGR01355	coord: 5..294 e-value: 4.7E-112 score: 371.8
IPR002125	Cytidine and deoxycytidylate deaminase domain	PFAM	PF00383	dCMP_cyt_deam_1	coord: 35..115 e-value: 2.7E-11 score: 43.2
IPR002125	Cytidine and deoxycytidylate deaminase domain	PROSITE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 23..148 score: 20.980062
IPR002125	Cytidine and deoxycytidylate deaminase domain	PROSITE	PS51747	CYT_DCMP_DEAMINASES_2	coord: 185..298 score: 25.339058
IPR016192	APOBEC/CMP deaminase, zinc-binding	PROSITE	PS00903	CYT_DCMP_DEAMINASES_1	coord: 77..111
IPR016193	Cytidine deaminase-like	SUPERFAMILY	53927	Cytidine deaminase-like	coord: 134..284
IPR016193	Cytidine deaminase-like	SUPERFAMILY	53927	Cytidine deaminase-like	coord: 13..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G002700.1	Lsi06G002700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009972	cytidine deamination
cellular_component	GO:0005829	cytosol
molecular_function	GO:0004126	cytidine deaminase activity
molecular_function	GO:0047844	deoxycytidine deaminase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016787	hydrolase activity