Lsi06G001700 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G001700
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionF-box domain-containing protein
Locationchr06: 1879226 .. 1880392 (+)
RNA-Seq ExpressionLsi06G001700
SyntenyLsi06G001700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAACAAGCCGGTTAAGAACACAAATTCCGAGCTTCCACCTGATATCCTTCAGCTAATCTTCTCGAAACTCCCTTTCTTCAATTTGCCCACTTGCAGGTTCGTCTCTAGATCATGGAACAATCTGGTTTTATCCTGTAAGTTTGATCCTTCAATCTCCATTTCCGATTTCTTCGTTGCCCATTTTTATTCCTGTCGTGATCGCAATCTCCATTGTGTGGAGTTCGATCCTCAACATTTGAAAGGAATGAGTACTGTTGCCTCATTCACCTTCCACCACCCTGAGTTTTCCTCCGGTTCTTGTAAGATCTCGATTATCAATTCCTGTACTGGACTCCTTTCTCTTCTTATCACCAAAAGAAGAAGACGAGGACTTAAACCTAATGTTGTTTGTGTATTGAATCCCATGACTAATGAATATTTCAAACTTCCCACCTTCAGATCCAAAGGGGATTGGAATAAAAACTATTTTTATGGATTAGGGTTTAATCCTAGAACAAAGCAGTACAAATTAGCAAGAAGCCTATTTTTCTGTGATGCATTCAATGTAGACATTTTTGCATTTGGTACAAGCTCTGAATGGACTCCTGTTGGCTCATTGCCTTATTTTATCAATGAATGCCATGGTGCATACTTCAATGGAGGCCTCTATTGGGTTGGATTTCAGCAGCTATTTAGATCTAATGCTGAACTAAGTGATTTTACTGATGTTATTTACCGTCTGGATTTAGAAGATGAGAAATTTGAGCAAATTTCTTTTCCCTTAGATGGTGGTGATGGTGACATTGTTTCTCCTTACATTGGAGTCTATAATGGCGCTCTGTATCTAACTCTTTGCTATGAGAATTTCGAGTTCTATGTTTGGAAGATGGAAGAAGATTTTTCATGGATTAAGGAATTTGTTCTTGCTCCACCAGAAACTTTATATCATTCTTTCCGTCGTCATAGCCCTATAGATTGTCATCTTCAACTCATCAAACCTTGTGAAGATGGGAACATCTTGTGTCTTTTTGCTGGACTTCAATTAATATTGTATGACCCCAAGACTAAGACGATGGAGGTATTGACTGATCAAGATTTTGAAATTAAGAAATATATGTGTGTTCATCAGATTGACTCCTTCAATTTTAATTCTCTCCATAACATTTTGGCAGGAAAGTGTTGA

mRNA sequence

ATGGAGAACAAGCCGGTTAAGAACACAAATTCCGAGCTTCCACCTGATATCCTTCAGCTAATCTTCTCGAAACTCCCTTTCTTCAATTTGCCCACTTGCAGGTTCGTCTCTAGATCATGGAACAATCTGGTTTTATCCTGTAAGTTTGATCCTTCAATCTCCATTTCCGATTTCTTCGTTGCCCATTTTTATTCCTGTCGTGATCGCAATCTCCATTGTGTGGAGTTCGATCCTCAACATTTGAAAGGAATGAGTACTGTTGCCTCATTCACCTTCCACCACCCTGAGTTTTCCTCCGGTTCTTGTAAGATCTCGATTATCAATTCCTGTACTGGACTCCTTTCTCTTCTTATCACCAAAAGAAGAAGACGAGGACTTAAACCTAATGTTGTTTGTGTATTGAATCCCATGACTAATGAATATTTCAAACTTCCCACCTTCAGATCCAAAGGGGATTGGAATAAAAACTATTTTTATGGATTAGGGTTTAATCCTAGAACAAAGCAGTACAAATTAGCAAGAAGCCTATTTTTCTGTGATGCATTCAATGTAGACATTTTTGCATTTGGTACAAGCTCTGAATGGACTCCTGTTGGCTCATTGCCTTATTTTATCAATGAATGCCATGGTGCATACTTCAATGGAGGCCTCTATTGGGTTGGATTTCAGCAGCTATTTAGATCTAATGCTGAACTAAGTGATTTTACTGATGTTATTTACCGTCTGGATTTAGAAGATGAGAAATTTGAGCAAATTTCTTTTCCCTTAGATGGTGGTGATGGTGACATTGTTTCTCCTTACATTGGAGTCTATAATGGCGCTCTGTATCTAACTCTTTGCTATGAGAATTTCGAGTTCTATGTTTGGAAGATGGAAGAAGATTTTTCATGGATTAAGGAATTTGTTCTTGCTCCACCAGAAACTTTATATCATTCTTTCCGTCGTCATAGCCCTATAGATTGTCATCTTCAACTCATCAAACCTTGTGAAGATGGGAACATCTTGTGTCTTTTTGCTGGACTTCAATTAATATTGTATGACCCCAAGACTAAGACGATGGAGGTATTGACTGATCAAGATTTTGAAATTAAGAAATATATGTGTGTTCATCAGATTGACTCCTTCAATTTTAATTCTCTCCATAACATTTTGGCAGGAAAGTGTTGA

Coding sequence (CDS)

ATGGAGAACAAGCCGGTTAAGAACACAAATTCCGAGCTTCCACCTGATATCCTTCAGCTAATCTTCTCGAAACTCCCTTTCTTCAATTTGCCCACTTGCAGGTTCGTCTCTAGATCATGGAACAATCTGGTTTTATCCTGTAAGTTTGATCCTTCAATCTCCATTTCCGATTTCTTCGTTGCCCATTTTTATTCCTGTCGTGATCGCAATCTCCATTGTGTGGAGTTCGATCCTCAACATTTGAAAGGAATGAGTACTGTTGCCTCATTCACCTTCCACCACCCTGAGTTTTCCTCCGGTTCTTGTAAGATCTCGATTATCAATTCCTGTACTGGACTCCTTTCTCTTCTTATCACCAAAAGAAGAAGACGAGGACTTAAACCTAATGTTGTTTGTGTATTGAATCCCATGACTAATGAATATTTCAAACTTCCCACCTTCAGATCCAAAGGGGATTGGAATAAAAACTATTTTTATGGATTAGGGTTTAATCCTAGAACAAAGCAGTACAAATTAGCAAGAAGCCTATTTTTCTGTGATGCATTCAATGTAGACATTTTTGCATTTGGTACAAGCTCTGAATGGACTCCTGTTGGCTCATTGCCTTATTTTATCAATGAATGCCATGGTGCATACTTCAATGGAGGCCTCTATTGGGTTGGATTTCAGCAGCTATTTAGATCTAATGCTGAACTAAGTGATTTTACTGATGTTATTTACCGTCTGGATTTAGAAGATGAGAAATTTGAGCAAATTTCTTTTCCCTTAGATGGTGGTGATGGTGACATTGTTTCTCCTTACATTGGAGTCTATAATGGCGCTCTGTATCTAACTCTTTGCTATGAGAATTTCGAGTTCTATGTTTGGAAGATGGAAGAAGATTTTTCATGGATTAAGGAATTTGTTCTTGCTCCACCAGAAACTTTATATCATTCTTTCCGTCGTCATAGCCCTATAGATTGTCATCTTCAACTCATCAAACCTTGTGAAGATGGGAACATCTTGTGTCTTTTTGCTGGACTTCAATTAATATTGTATGACCCCAAGACTAAGACGATGGAGGTATTGACTGATCAAGATTTTGAAATTAAGAAATATATGTGTGTTCATCAGATTGACTCCTTCAATTTTAATTCTCTCCATAACATTTTGGCAGGAAAGTGTTGA

Protein sequence

MENKPVKNTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYSCRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFNVDIFAFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIYRLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSWIKEFVLAPPETLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQDFEIKKYMCVHQIDSFNFNSLHNILAGKC
Homology
BLAST of Lsi06G001700 vs. ExPASy Swiss-Prot
Match: Q9SFC7 (F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.3e-13
Identity = 94/376 (25.00%), Postives = 156/376 (41.49%), Query Frame = 0

Query: 13  LPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLS---CKFDPSISISDFFVAHFYSCRDR 72
           LP DI+  IFS+LP  ++    FV RSW +++          S       + H  S    
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRN 87

Query: 73  NLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGLKPN 132
            LH ++   +  K + T   FT     F+S   +  ++ SC GLL L         L  +
Sbjct: 88  GLHFLDLSEEE-KRIKT-KKFTL---RFASSMPEFDVVGSCNGLLCL------SDSLYND 147

Query: 133 VVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFN------ 192
            + + NP T    +LP   +K   ++   +G GF+  TK+YK+ + ++F  + +      
Sbjct: 148 SLYLYNPFTTNSLELPECSNKYH-DQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIY 207

Query: 193 ------------VDIFAFGT-----SSEWTPVGSLPY-FINECHGAYFNGGLYWVGFQQL 252
                       V I    +     S  W  +G  PY F+     A  NG L++V     
Sbjct: 208 RGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFV----- 267

Query: 253 FRSNAELSDFTDVIYRLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENF- 312
            R    + D   V +  DLEDE+F++I  P  GG        + +  G L   + Y N+ 
Sbjct: 268 TRPRRHVPDRKFVSF--DLEDEEFKEIPKPDCGGLNRTNHRLVNL-KGCL-CAVVYGNYG 327

Query: 313 EFYVWKMEE---DFSWIKEFVLAP--PETLYHSFRR------HSPIDCHLQLIKPCEDGN 350
           +  +W M+      SW KE+ +    P+ L  +  R      ++     ++++   E+G 
Sbjct: 328 KLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGE 382

BLAST of Lsi06G001700 vs. ExPASy Swiss-Prot
Match: Q9FHS6 (F-box/kelch-repeat protein At5g43190 OS=Arabidopsis thaliana OX=3702 GN=At5g43190 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.1e-06
Identity = 62/236 (26.27%), Postives = 99/236 (41.95%), Query Frame = 0

Query: 8   NTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKF--DPSISISDFFVAHFYS 67
           N  S LP  +L+ I S LPF  L T R +SR   +L+LS  F  D S S+  F +     
Sbjct: 46  NIWSNLPNHLLEHILSLLPFKTLLTLRSISRHLRSLILSPSFISDHSFSLPSFLLLS--- 105

Query: 68  CRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRG 127
                 H   F+   L   + ++  T   P   S +C  S+++S  GLL   ++      
Sbjct: 106 ------HPQSFNSFPLFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVSS 165

Query: 128 LKPNVVCVLNPMT--NEYFKLPTFRSKGDWNKNYFYGLGFNPR-TKQYKLARSLFFCDAF 187
           L      + NP+T  +   KLP +    +        L  +P+  K + L  S     + 
Sbjct: 166 LS-----IFNPLTRSSRSIKLPCYPFPFE-----LLSLVTSPKGYKIFTLCSSSSAASSR 225

Query: 188 NVDIFAFGTSSEWTPVGS----LPYFINECHGAYFNGGLYWVGFQQLFRSNAELSD 235
           +V ++  G  S W   G     LP   N+  G ++NG LY+   +     + +L+D
Sbjct: 226 SVCLYDSGDRS-WRKFGGVDQVLPRGFNQ-DGVFYNGSLYFARSEPFLIVSVDLND 260

BLAST of Lsi06G001700 vs. ExPASy Swiss-Prot
Match: Q9M0Q9 (Putative F-box protein At4g09190 OS=Arabidopsis thaliana OX=3702 GN=At4g09190 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05
Identity = 80/370 (21.62%), Postives = 143/370 (38.65%), Query Frame = 0

Query: 7   KNTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSI---SISDFFVAHF 66
           ++    +P D++  I S LP  ++   R VS+ W++++ +  F  S+   S+S       
Sbjct: 16  RSQREHIPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVTRSLSSRPCVLL 75

Query: 67  YSCRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRR 126
              +   L          K    V +F +  P     + K+    S  GL+ L       
Sbjct: 76  IFQKHDKLFFFASPVHQKKTCPNVENFQYTIP----NNGKLQRCESVHGLIYL------- 135

Query: 127 RGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFN 186
                NV+ + NP+T  +F LP   SK       F  LG++P   +YK+       +   
Sbjct: 136 -ETSTNVMFIRNPITKSFFTLPKLDSKEGRPLTGF--LGYDPINGKYKVL--CILKERNK 195

Query: 187 VDIFAFGTSSEWTPV--GSLPYFINECHGAYFNGGLYWVG-FQQLFRSNAELSDFTDVIY 246
           + I   G    W  +  G L ++    +    +G +Y+ G F    R    +  F     
Sbjct: 196 IGILTLGAQESWRILSKGFLSHYKVTGYAKCIDGVIYYEGSFGDGLRQELAIMSF----- 255

Query: 247 RLDLEDEKFEQISFPLDGGDGDIVSPYIG-------VYNG-ALYLTLCYENFEFYVWK-- 306
             DL  EKF  I  P         S Y G       + +G +L++    +N + +++K  
Sbjct: 256 --DLRSEKFSLIKHPKKSSIATCWSSYEGRLALVSSIASGVSLWILEDADNHKQWIYKHF 315

Query: 307 -MEEDF---SWIKEFVLAPPETLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILY 357
               +F    W  + V    E +Y S+R +      L +     +G +  L+   +++  
Sbjct: 316 PSHREFIKERWKLKGVTRTGEFIYTSYRAYV-----LNV-----EGRV--LYQWFRILYV 350

BLAST of Lsi06G001700 vs. ExPASy Swiss-Prot
Match: Q9SI34 (Putative F-box only protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBX9 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 3.9e-05
Identity = 66/262 (25.19%), Postives = 107/262 (40.84%), Query Frame = 0

Query: 11  SELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYSCRDRN 70
           S+LPPD+++ I S++P  +L   RF  + WN+L  + +F           +H    +D  
Sbjct: 2   SDLPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYT 61

Query: 71  LHCVEFDPQHLKGMS----TVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGL 130
           + C      +  G S    +V S    H  ++S    I+ +  C GLL L  TK  R   
Sbjct: 62  V-CPMSINLNFSGSSIEFKSVLSLKDSH--YNSEQVYIAKVFHCDGLL-LCTTKDHR--- 121

Query: 131 KPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGF--NPRTKQYKLARSLFFCD---- 190
               + V NP   E         + D+     + LG+  N   + YK+ R  F+      
Sbjct: 122 ----LLVWNPCLGE---TRWINFENDYKPYSRFSLGYKNNKSCRSYKILR--FWTSYLTP 181

Query: 191 ---AFNVDIFAFGTSSEWTPV---GSLPYFINEC-HGAYFNGGLYWVGFQQLFRSNAELS 250
                  +I+ F T S W  +    SL YF+ E  +G  F G  YW+           L 
Sbjct: 182 NHIGLRYNIYEFTTDS-WRVLIDKVSLNYFLIESENGVSFKGNTYWLA----------LD 236

Query: 251 DFTDVIYRLDLEDEKFEQISFP 256
           + T+ +   D   E+F+++  P
Sbjct: 242 EETNFLLGFDFTMERFKRLCLP 236

BLAST of Lsi06G001700 vs. ExPASy Swiss-Prot
Match: Q9ZVI1 (F-box protein At2g38590 OS=Arabidopsis thaliana OX=3702 GN=At2g38590 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 8.8e-05
Identity = 66/263 (25.10%), Postives = 104/263 (39.54%), Query Frame = 0

Query: 11  SELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKF------------DPSISISDF 70
           S LP  +++ IF ++P  +L   R   +SWN L  S  F            + S+ I+  
Sbjct: 6   SNLPRVLIEEIFFRVPLKSLRAVRLTCKSWNTLSKSRSFRKLYISKRATREEESMMIA-- 65

Query: 71  FVAHFYSCRDRNLHCVEFDP-QHLKGMSTVASFTF-HHPEFSSGSCKISIINSCTGLLSL 130
            + +F     R +   + DP +  K      S  F   P F     KIS +  C GLL  
Sbjct: 66  -MMNFDLYSMRVVVDDDVDPSKAFKKKRNKKSIAFKRQPIFLDEQVKISQVFHCEGLLLC 125

Query: 131 LITKRRRRGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQ--YKLAR 190
            + +   R      V V NP   +   +    S       + Y LG+  +  +  ++L R
Sbjct: 126 FLKEDDTR------VVVWNPYCGQTRWIQLRYSHRPHKDRFIYALGYKDKESRGSFQLLR 185

Query: 191 SL-FFCDA-----FNVDIFAFGTSSEWTPVGSLPYFINEC--HGAYFNGGLYWVGFQQLF 250
            + +F  A     F  +I+ F + S WT +   P++   C   G   NG  YW   ++  
Sbjct: 186 FVDYFLGAPKNQYFWYEIYDFNSDS-WTTLDVTPHWCIYCCDRGVSLNGNTYWCAKER-- 245

BLAST of Lsi06G001700 vs. ExPASy TrEMBL
Match: A0A0A0M1M5 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.8e-160
Identity = 280/391 (71.61%), Postives = 321/391 (82.10%), Query Frame = 0

Query: 1   MENKP---VKNTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISD 60
           ME KP   + N  SELPPD+LQLIFSKLPFFNLPTCR VS +WNNL+ SCKFDPSISIS 
Sbjct: 1   MEKKPKTNIVNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISH 60

Query: 61  FFVAHFYSCRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLL 120
            F A FYS R  NLHCVEFDPQH +GMSTVASF F HP+ SSGSC+I+IINSC+GL+SL+
Sbjct: 61  LFFARFYSSRHPNLHCVEFDPQHAEGMSTVASFAF-HPDLSSGSCRITIINSCSGLISLI 120

Query: 121 ITKRRRRGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLF 180
           I KRRRRG + ++VCVLNP+TNEYFKLPT RSKGD   NY YGLGF+P T QYKLAR+ F
Sbjct: 121 INKRRRRGHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHF 180

Query: 181 FCDAFNVDIFAFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTD 240
             D F VDIFAFGTS EWTPVGS+P F+NE HG Y NGGLYWVG Q+L   N  +SD+T+
Sbjct: 181 THDEFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKL--PNGGISDYTE 240

Query: 241 VIYRLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSW 300
           VIYRLDL+DEKFE+ISFPLDGGD     PYI VYNG LYLT C E+F+++ WKMEEDFSW
Sbjct: 241 VIYRLDLKDEKFEKISFPLDGGD----DPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSW 300

Query: 301 IKEFVLAPPETLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLT 360
            KEFVLA PE ++HS R H PI  +LQLIK CEDGNILCL+AG+ LILYDP T+T+E+LT
Sbjct: 301 SKEFVLALPENVHHSLRHH-PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILT 360

Query: 361 DQDFEIKKYMCVHQIDSFNFNSLHNILAGKC 389
           +QDFEIK+ M VHQI+SF+FNSLHNILAGKC
Sbjct: 361 NQDFEIKEAMWVHQIESFSFNSLHNILAGKC 383

BLAST of Lsi06G001700 vs. ExPASy TrEMBL
Match: A0A5D3CIX9 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003440 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 9.4e-151
Identity = 262/381 (68.77%), Postives = 305/381 (80.05%), Query Frame = 0

Query: 8   NTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYSCR 67
           N + ELPPDILQ IFSK+PFFNLPTCR VSR+WNNL+ SCKFDPS SI   F A FYS R
Sbjct: 10  NKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSR 69

Query: 68  DRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGLK 127
            RNLHCVEFDPQH++GMS VASF F HP+F S S +I+IINSC+GL+SLLITKRRRRG +
Sbjct: 70  HRNLHCVEFDPQHVEGMSIVASFAF-HPDFCSASSRITIINSCSGLISLLITKRRRRGQR 129

Query: 128 PNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFNVDIF 187
            +VVCVLNP+TNEYFK P  R KGD   NY YGLGF+P+T QYKLAR+ F  + F VDIF
Sbjct: 130 RDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIF 189

Query: 188 AFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIYRLDLEDE 247
           AFGTS EWTP+GS+P F+NE HG YFNGGLYWVG Q+    N  LSD+T V+YRLDL DE
Sbjct: 190 AFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQL-PNGGLSDYTGVVYRLDLNDE 249

Query: 248 KFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSWIKEFVLAPPE 307
           KF++IS P  GGD     PY+GVYNG LYLTLC E+F+++VWKM+EDFSW KEFVLA PE
Sbjct: 250 KFKKISIPF-GGD----EPYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPE 309

Query: 308 TLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQDFEIKKYM 367
            + HS  RH PI  +LQL+K CEDG+ILCL AG+ LI+YDPKT+ ME+LTDQDFEIK+ M
Sbjct: 310 NILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGM 369

Query: 368 CVHQIDSFNFNSLHNILAGKC 389
             HQI+SF+FNSLHN L GKC
Sbjct: 370 WFHQIESFSFNSLHNTLTGKC 383

BLAST of Lsi06G001700 vs. ExPASy TrEMBL
Match: A0A1S3BQV8 (putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 9.4e-151
Identity = 262/381 (68.77%), Postives = 305/381 (80.05%), Query Frame = 0

Query: 8   NTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYSCR 67
           N + ELPPDILQ IFSK+PFFNLPTCR VSR+WNNL+ SCKFDPS SI   F A FYS R
Sbjct: 10  NKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSR 69

Query: 68  DRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGLK 127
            RNLHCVEFDPQH++GMS VASF F HP+F S S +I+IINSC+GL+SLLITKRRRRG +
Sbjct: 70  HRNLHCVEFDPQHVEGMSIVASFAF-HPDFCSASSRITIINSCSGLISLLITKRRRRGQR 129

Query: 128 PNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFNVDIF 187
            +VVCVLNP+TNEYFK P  R KGD   NY YGLGF+P+T QYKLAR+ F  + F VDIF
Sbjct: 130 RDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIF 189

Query: 188 AFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIYRLDLEDE 247
           AFGTS EWTP+GS+P F+NE HG YFNGGLYWVG Q+    N  LSD+T V+YRLDL DE
Sbjct: 190 AFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQL-PNGGLSDYTGVVYRLDLNDE 249

Query: 248 KFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSWIKEFVLAPPE 307
           KF++IS P  GGD     PY+GVYNG LYLTLC E+F+++VWKM+EDFSW KEFVLA PE
Sbjct: 250 KFKKISIPF-GGD----EPYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPE 309

Query: 308 TLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQDFEIKKYM 367
            + HS  RH PI  +LQL+K CEDG+ILCL AG+ LI+YDPKT+ ME+LTDQDFEIK+ M
Sbjct: 310 NILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGM 369

Query: 368 CVHQIDSFNFNSLHNILAGKC 389
             HQI+SF+FNSLHN L GKC
Sbjct: 370 WFHQIESFSFNSLHNTLTGKC 383

BLAST of Lsi06G001700 vs. ExPASy TrEMBL
Match: A0A0A0KJY9 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 2.3e-101
Identity = 203/387 (52.45%), Postives = 263/387 (67.96%), Query Frame = 0

Query: 7   KNTNSELPPD-ILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYS 66
           K +NSE PPD I+Q+I SK+P FNL +CR V +SWNNL+L+CKFDPS+     F++  Y 
Sbjct: 11  KLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSL-----FLSFAYD 70

Query: 67  CRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRG 126
           C  R L+CV+FDP + +GM+++ SFTF HP+FS+    ISIIN+C GLLSLLI+K R+ G
Sbjct: 71  CPSRTLYCVDFDPMYFEGMNSIGSFTF-HPKFSTSDSSISIINACNGLLSLLISK-RKLG 130

Query: 127 LKPNVVCVLNPMTNEYFKLPTFRSKGD--WNKNYFYGLGFNPRTKQYKLARSLFFCDAFN 186
               V+ +LNPMTNEYFK P  +SK      + Y YGLGFNP+TKQYK+AR+ F  D   
Sbjct: 131 SVSYVLGILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDEST 190

Query: 187 --VDIFAFGTSSE-WTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIY 246
             V+IF FG++ + WTPVG LP  + E HG YF GGLYWV  Q     ++        IY
Sbjct: 191 TLVEIFTFGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSS-----ISAIY 250

Query: 247 RLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSWIKE 306
           RLDLE+EK E+IS P   G       + GV++G LYLT+  +N ++ VWKM+++FSWIK 
Sbjct: 251 RLDLENEKLEKISCPQYIGG----HFFFGVFDGTLYLTVS-KNNKYQVWKMKDNFSWIKA 310

Query: 307 FVLAPPETLYHSFRRHSPID-CHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQ 366
           FV++ P  L H    H P     L  IK CEDG ILCL AGL LILYDPKTK+ E+LTDQ
Sbjct: 311 FVISRPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ 370

Query: 367 DFEIKKYMCVHQIDSFNFNSLHNILAG 387
             +++K++ VH ID+FNFNSL +ILAG
Sbjct: 371 SVKVEKHLHVHHIDAFNFNSLPSILAG 380

BLAST of Lsi06G001700 vs. ExPASy TrEMBL
Match: A0A5D3CM94 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006720 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 3.1e-101
Identity = 205/387 (52.97%), Postives = 263/387 (67.96%), Query Frame = 0

Query: 7   KNTNSELPPD-ILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYS 66
           K +NSE PPD I+Q+I SK+P FNL +CR V +SWNNLVL+CKFDPS+     F++  Y 
Sbjct: 11  KLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLVLTCKFDPSL-----FISLAYD 70

Query: 67  CRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRG 126
           C  R L+CV+FDP + +GM++V SF+F HP+FS+ S  ISIIN+C GLLSLLI+K R+ G
Sbjct: 71  CPSRTLYCVDFDPMYSEGMNSVGSFSF-HPKFSTSSSSISIINACNGLLSLLISK-RKPG 130

Query: 127 LKPNVVCVLNPMTNEYFKLPTFRSKGD--WNKNYFYGLGFNPRTKQYKLARSLFFCDAFN 186
               V+ +LNPMTNEYFK P  +SK      + Y YGLGFNP+ KQYK+AR+ F  D   
Sbjct: 131 SVSYVLGILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKKKQYKIARTSFRPDEST 190

Query: 187 --VDIFAFGTSSE-WTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIY 246
             V+IFAFG++ + WT VG LP  + E HG YFNGGLYWV  Q     ++        IY
Sbjct: 191 TLVEIFAFGSTYQVWTSVGFLPSLVVEDHGVYFNGGLYWVANQPDPHDSS-----ISTIY 250

Query: 247 RLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSWIKE 306
           RLD+E+E  E+IS P   G       + GV++G LYLT+  +N ++ VWKM+++FSWIK 
Sbjct: 251 RLDIENENLEKISCPQHLGG----HFFFGVFDGTLYLTVS-KNNKYQVWKMKDNFSWIKA 310

Query: 307 FVLAPPETLYHSFRRHSPID-CHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQ 366
           FV++ P  L H    H P     L  IK CEDG ILCL AGL LILYDPKTK+ E+LTDQ
Sbjct: 311 FVISSPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ 370

Query: 367 DFEIKKYMCVHQIDSFNFNSLHNILAG 387
             +++K++ VH IDSFNFNSL NILAG
Sbjct: 371 SVKVEKHLHVHHIDSFNFNSLPNILAG 380

BLAST of Lsi06G001700 vs. NCBI nr
Match: XP_038880514.1 (putative F-box protein At1g46984 [Benincasa hispida])

HSP 1 Score: 627.1 bits (1616), Expect = 1.0e-175
Identity = 311/392 (79.34%), Postives = 337/392 (85.97%), Query Frame = 0

Query: 1   MENKP---VKNTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISD 60
           ME KP   +K TNSELPPDILQLIFSKLPFFNLPTCR VS +WNNLVLSCKFDPSISIS+
Sbjct: 1   MEKKPKSKIKTTNSELPPDILQLIFSKLPFFNLPTCRLVSATWNNLVLSCKFDPSISISN 60

Query: 61  FFVAHFYSCRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLL 120
            F AHFYSCRDRNLHCV+ DPQHL+GMSTVASFTF HP  SSGSCKISIINSC+GL+SLL
Sbjct: 61  LFFAHFYSCRDRNLHCVDLDPQHLEGMSTVASFTF-HPNVSSGSCKISIINSCSGLISLL 120

Query: 121 ITKRRRRGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLF 180
           ITKRRRRG +P VVCVLNPMTNEYFKLPTFRSKGD  K+YFYGLGF+PRTKQYKLAR+ +
Sbjct: 121 ITKRRRRGHRPGVVCVLNPMTNEYFKLPTFRSKGDSVKDYFYGLGFSPRTKQYKLARTHY 180

Query: 181 FCDAFNVDIFAFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTD 240
            C  F V+IFAFGTS EWTPVGS+PYF+NE HG YFNGGLYWVG QQL   NA LS   D
Sbjct: 181 VCHEFIVEIFAFGTSCEWTPVGSVPYFLNEYHGVYFNGGLYWVGGQQL--PNAGLS---D 240

Query: 241 VIYRLDLEDEKFEQISFPLDGGD-GDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFS 300
           VIYRLDLED+KF+QISFPLDG D GD   PYIGVYN  LYLTLC  +FE++VWKMEEDFS
Sbjct: 241 VIYRLDLEDDKFKQISFPLDGDDEGDF--PYIGVYNDTLYLTLCCGDFEYHVWKMEEDFS 300

Query: 301 WIKEFVLAPPETLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVL 360
           WIKEFVLA PE ++HS  RH PI   LQLIK CEDGNILCL AGL LILYDPKT+T E+L
Sbjct: 301 WIKEFVLALPENVHHSLPRHHPIGYCLQLIKACEDGNILCLCAGLYLILYDPKTETTELL 360

Query: 361 TDQDFEIKKYMCVHQIDSFNFNSLHNILAGKC 389
           TDQDFEIKK+M V+QIDSFNFNSLHNILAGKC
Sbjct: 361 TDQDFEIKKHMWVYQIDSFNFNSLHNILAGKC 384

BLAST of Lsi06G001700 vs. NCBI nr
Match: XP_004135796.1 (putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical protein Csa_007182 [Cucumis sativus])

HSP 1 Score: 574.3 bits (1479), Expect = 7.8e-160
Identity = 280/391 (71.61%), Postives = 321/391 (82.10%), Query Frame = 0

Query: 1   MENKP---VKNTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISD 60
           ME KP   + N  SELPPD+LQLIFSKLPFFNLPTCR VS +WNNL+ SCKFDPSISIS 
Sbjct: 1   MEKKPKTNIVNKRSELPPDVLQLIFSKLPFFNLPTCRLVSTTWNNLISSCKFDPSISISH 60

Query: 61  FFVAHFYSCRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLL 120
            F A FYS R  NLHCVEFDPQH +GMSTVASF F HP+ SSGSC+I+IINSC+GL+SL+
Sbjct: 61  LFFARFYSSRHPNLHCVEFDPQHAEGMSTVASFAF-HPDLSSGSCRITIINSCSGLISLI 120

Query: 121 ITKRRRRGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLF 180
           I KRRRRG + ++VCVLNP+TNEYFKLPT RSKGD   NY YGLGF+P T QYKLAR+ F
Sbjct: 121 INKRRRRGHRLDLVCVLNPITNEYFKLPTSRSKGDRVPNYCYGLGFSPTTNQYKLARTHF 180

Query: 181 FCDAFNVDIFAFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTD 240
             D F VDIFAFGTS EWTPVGS+P F+NE HG Y NGGLYWVG Q+L   N  +SD+T+
Sbjct: 181 THDEFIVDIFAFGTSCEWTPVGSVPNFLNEYHGVYLNGGLYWVGSQKL--PNGGISDYTE 240

Query: 241 VIYRLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSW 300
           VIYRLDL+DEKFE+ISFPLDGGD     PYI VYNG LYLT C E+F+++ WKMEEDFSW
Sbjct: 241 VIYRLDLKDEKFEKISFPLDGGD----DPYIAVYNGTLYLTFCCEDFDYHAWKMEEDFSW 300

Query: 301 IKEFVLAPPETLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLT 360
            KEFVLA PE ++HS R H PI  +LQLIK CEDGNILCL+AG+ LILYDP T+T+E+LT
Sbjct: 301 SKEFVLALPENVHHSLRHH-PIGYYLQLIKFCEDGNILCLYAGILLILYDPSTQTVEILT 360

Query: 361 DQDFEIKKYMCVHQIDSFNFNSLHNILAGKC 389
           +QDFEIK+ M VHQI+SF+FNSLHNILAGKC
Sbjct: 361 NQDFEIKEAMWVHQIESFSFNSLHNILAGKC 383

BLAST of Lsi06G001700 vs. NCBI nr
Match: XP_008450717.1 (PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 543.1 bits (1398), Expect = 1.9e-150
Identity = 262/381 (68.77%), Postives = 305/381 (80.05%), Query Frame = 0

Query: 8   NTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYSCR 67
           N + ELPPDILQ IFSK+PFFNLPTCR VSR+WNNL+ SCKFDPS SI   F A FYS R
Sbjct: 10  NKSYELPPDILQQIFSKIPFFNLPTCRLVSRTWNNLISSCKFDPSTSIYHLFFARFYSSR 69

Query: 68  DRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGLK 127
            RNLHCVEFDPQH++GMS VASF F HP+F S S +I+IINSC+GL+SLLITKRRRRG +
Sbjct: 70  HRNLHCVEFDPQHVEGMSIVASFAF-HPDFCSASSRITIINSCSGLISLLITKRRRRGQR 129

Query: 128 PNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFNVDIF 187
            +VVCVLNP+TNEYFK P  R KGD   NY YGLGF+P+T QYKLAR+ F  + F VDIF
Sbjct: 130 RDVVCVLNPITNEYFKHPNLRLKGDKVPNYCYGLGFSPKTNQYKLARTHFAHNEFIVDIF 189

Query: 188 AFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIYRLDLEDE 247
           AFGTS EWTP+GS+P F+NE HG YFNGGLYWVG Q+    N  LSD+T V+YRLDL DE
Sbjct: 190 AFGTSCEWTPIGSVPNFLNEYHGVYFNGGLYWVGSQKQL-PNGGLSDYTGVVYRLDLNDE 249

Query: 248 KFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSWIKEFVLAPPE 307
           KF++IS P  GGD     PY+GVYNG LYLTLC E+F+++VWKM+EDFSW KEFVLA PE
Sbjct: 250 KFKKISIPF-GGD----EPYVGVYNGTLYLTLCCEDFDYHVWKMKEDFSWSKEFVLALPE 309

Query: 308 TLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQDFEIKKYM 367
            + HS  RH PI  +LQL+K CEDG+ILCL AG+ LI+YDPKT+ ME+LTDQDFEIK+ M
Sbjct: 310 NILHSLHRHHPIGYYLQLVKFCEDGSILCLCAGILLIVYDPKTQQMEILTDQDFEIKEGM 369

Query: 368 CVHQIDSFNFNSLHNILAGKC 389
             HQI+SF+FNSLHN L GKC
Sbjct: 370 WFHQIESFSFNSLHNTLTGKC 383

BLAST of Lsi06G001700 vs. NCBI nr
Match: XP_038883771.1 (putative F-box protein At1g60370 [Benincasa hispida])

HSP 1 Score: 391.3 bits (1004), Expect = 9.4e-105
Identity = 211/388 (54.38%), Postives = 266/388 (68.56%), Query Frame = 0

Query: 7   KNTNSELPPD-ILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYS 66
           K+++SELPPD I+Q+I SK+P FNLP+CR V ++WNNLVL+CKFDP + IS   +A  Y 
Sbjct: 11  KSSDSELPPDNIIQVILSKVPLFNLPSCRLVCKAWNNLVLTCKFDPPLLISSLSLA--YD 70

Query: 67  CRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRG 126
           C  RNL+C++F+ ++L+GMS+V SFTF HP+F + S  ISIINSC GLLSLLI+KR+   
Sbjct: 71  CPSRNLYCMDFNLKYLEGMSSVVSFTF-HPKFFTSS--ISIINSCNGLLSLLISKRKSGS 130

Query: 127 LKPNVVCVLNPMTNEYFKLPTFRSKGD--WNKNYFYGLGFNPRTKQYKLARSLFFCD--A 186
               V+C+LNPMTNEYFK P  +SK      + Y YGLGF+P TKQYK+AR+ F  D   
Sbjct: 131 PISYVLCILNPMTNEYFKFPAEKSKTHCCCGRPYSYGLGFSPETKQYKIARTSFLRDEST 190

Query: 187 FNVDIFAFGTSSEWTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIYR 246
            +V+IFAFGT+ EWTPVG LP  + E HG YFNGGLYW           +  D  + IYR
Sbjct: 191 TSVEIFAFGTTREWTPVGVLPSLVVEDHGVYFNGGLYWT------VDELQPRDSNNAIYR 250

Query: 247 LDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFE--FYVWKMEEDFSWIK 306
           LD+E+EK E+IS P  GG       + GV++G LYLT      +  + VWKMEE+ SWIK
Sbjct: 251 LDIENEKLEKISCPHYGGG----HFFFGVFDGTLYLTTYTGTVDNIYQVWKMEENLSWIK 310

Query: 307 EFVLAPPETLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQ 366
            FVL+ PE L H           LQ IK CEDG ILCL AG  LILYDPKTK +++LT+Q
Sbjct: 311 AFVLSRPENLRHPEHDQPWGVSQLQPIKVCEDGKILCLLAGFLLILYDPKTKRVKILTNQ 370

Query: 367 DFEIKKYMCVHQIDSFNFNSLHNILAGK 388
           D E ++++ VHQIDS NFNSL NILAGK
Sbjct: 371 DVETERHLHVHQIDSSNFNSLPNILAGK 383

BLAST of Lsi06G001700 vs. NCBI nr
Match: XP_004134745.1 (F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g07870 [Cucumis sativus] >XP_031743637.1 F-box protein At3g07870 [Cucumis sativus] >KGN49139.1 hypothetical protein Csa_003023 [Cucumis sativus])

HSP 1 Score: 379.0 bits (972), Expect = 4.8e-101
Identity = 203/387 (52.45%), Postives = 263/387 (67.96%), Query Frame = 0

Query: 7   KNTNSELPPD-ILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYS 66
           K +NSE PPD I+Q+I SK+P FNL +CR V +SWNNL+L+CKFDPS+     F++  Y 
Sbjct: 11  KLSNSEFPPDNIIQVILSKVPLFNLTSCRLVCKSWNNLILTCKFDPSL-----FLSFAYD 70

Query: 67  CRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRG 126
           C  R L+CV+FDP + +GM+++ SFTF HP+FS+    ISIIN+C GLLSLLI+K R+ G
Sbjct: 71  CPSRTLYCVDFDPMYFEGMNSIGSFTF-HPKFSTSDSSISIINACNGLLSLLISK-RKLG 130

Query: 127 LKPNVVCVLNPMTNEYFKLPTFRSKGD--WNKNYFYGLGFNPRTKQYKLARSLFFCDAFN 186
               V+ +LNPMTNEYFK P  +SK      + Y YGLGFNP+TKQYK+AR+ F  D   
Sbjct: 131 SVSYVLGILNPMTNEYFKFPAEKSKSHCCCGRLYSYGLGFNPKTKQYKIARTSFRPDEST 190

Query: 187 --VDIFAFGTSSE-WTPVGSLPYFINECHGAYFNGGLYWVGFQQLFRSNAELSDFTDVIY 246
             V+IF FG++ + WTPVG LP  + E HG YF GGLYWV  Q     ++        IY
Sbjct: 191 TLVEIFTFGSTHQVWTPVGFLPSLVVEDHGVYFKGGLYWVANQPDPHDSS-----ISAIY 250

Query: 247 RLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENFEFYVWKMEEDFSWIKE 306
           RLDLE+EK E+IS P   G       + GV++G LYLT+  +N ++ VWKM+++FSWIK 
Sbjct: 251 RLDLENEKLEKISCPQYIGG----HFFFGVFDGTLYLTVS-KNNKYQVWKMKDNFSWIKA 310

Query: 307 FVLAPPETLYHSFRRHSPID-CHLQLIKPCEDGNILCLFAGLQLILYDPKTKTMEVLTDQ 366
           FV++ P  L H    H P     L  IK CEDG ILCL AGL LILYDPKTK+ E+LTDQ
Sbjct: 311 FVISRPRNLCHPDHPHQPWGVSQLDPIKACEDGKILCLLAGLHLILYDPKTKSAEILTDQ 370

Query: 367 DFEIKKYMCVHQIDSFNFNSLHNILAG 387
             +++K++ VH ID+FNFNSL +ILAG
Sbjct: 371 SVKVEKHLHVHHIDAFNFNSLPSILAG 380

BLAST of Lsi06G001700 vs. TAIR 10
Match: AT3G07870.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.6e-14
Identity = 94/376 (25.00%), Postives = 156/376 (41.49%), Query Frame = 0

Query: 13  LPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLS---CKFDPSISISDFFVAHFYSCRDR 72
           LP DI+  IFS+LP  ++    FV RSW +++          S       + H  S    
Sbjct: 28  LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPTKPCLLLHCDSPIRN 87

Query: 73  NLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGLKPN 132
            LH ++   +  K + T   FT     F+S   +  ++ SC GLL L         L  +
Sbjct: 88  GLHFLDLSEEE-KRIKT-KKFTL---RFASSMPEFDVVGSCNGLLCL------SDSLYND 147

Query: 133 VVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFN------ 192
            + + NP T    +LP   +K   ++   +G GF+  TK+YK+ + ++F  + +      
Sbjct: 148 SLYLYNPFTTNSLELPECSNKYH-DQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIY 207

Query: 193 ------------VDIFAFGT-----SSEWTPVGSLPY-FINECHGAYFNGGLYWVGFQQL 252
                       V I    +     S  W  +G  PY F+     A  NG L++V     
Sbjct: 208 RGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAPYKFVKRSSEALVNGRLHFV----- 267

Query: 253 FRSNAELSDFTDVIYRLDLEDEKFEQISFPLDGGDGDIVSPYIGVYNGALYLTLCYENF- 312
            R    + D   V +  DLEDE+F++I  P  GG        + +  G L   + Y N+ 
Sbjct: 268 TRPRRHVPDRKFVSF--DLEDEEFKEIPKPDCGGLNRTNHRLVNL-KGCL-CAVVYGNYG 327

Query: 313 EFYVWKMEE---DFSWIKEFVLAP--PETLYHSFRR------HSPIDCHLQLIKPCEDGN 350
           +  +W M+      SW KE+ +    P+ L  +  R      ++     ++++   E+G 
Sbjct: 328 KLDIWVMKTYGVKESWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVLCLLENGE 382

BLAST of Lsi06G001700 vs. TAIR 10
Match: AT5G43190.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 4.3e-07
Identity = 62/236 (26.27%), Postives = 99/236 (41.95%), Query Frame = 0

Query: 8   NTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKF--DPSISISDFFVAHFYS 67
           N  S LP  +L+ I S LPF  L T R +SR   +L+LS  F  D S S+  F +     
Sbjct: 46  NIWSNLPNHLLEHILSLLPFKTLLTLRSISRHLRSLILSPSFISDHSFSLPSFLLLS--- 105

Query: 68  CRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRG 127
                 H   F+   L   + ++  T   P   S +C  S+++S  GLL   ++      
Sbjct: 106 ------HPQSFNSFPLFNPNLISWCTLPLPRSLSLTCASSLLSSSNGLLCFSLSPSSVSS 165

Query: 128 LKPNVVCVLNPMT--NEYFKLPTFRSKGDWNKNYFYGLGFNPR-TKQYKLARSLFFCDAF 187
           L      + NP+T  +   KLP +    +        L  +P+  K + L  S     + 
Sbjct: 166 LS-----IFNPLTRSSRSIKLPCYPFPFE-----LLSLVTSPKGYKIFTLCSSSSAASSR 225

Query: 188 NVDIFAFGTSSEWTPVGS----LPYFINECHGAYFNGGLYWVGFQQLFRSNAELSD 235
           +V ++  G  S W   G     LP   N+  G ++NG LY+   +     + +L+D
Sbjct: 226 SVCLYDSGDRS-WRKFGGVDQVLPRGFNQ-DGVFYNGSLYFARSEPFLIVSVDLND 260

BLAST of Lsi06G001700 vs. TAIR 10
Match: AT4G09190.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 52.4 bits (124), Expect = 9.6e-07
Identity = 80/370 (21.62%), Postives = 143/370 (38.65%), Query Frame = 0

Query: 7   KNTNSELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSI---SISDFFVAHF 66
           ++    +P D++  I S LP  ++   R VS+ W++++ +  F  S+   S+S       
Sbjct: 16  RSQREHIPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVTRSLSSRPCVLL 75

Query: 67  YSCRDRNLHCVEFDPQHLKGMSTVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRR 126
              +   L          K    V +F +  P     + K+    S  GL+ L       
Sbjct: 76  IFQKHDKLFFFASPVHQKKTCPNVENFQYTIP----NNGKLQRCESVHGLIYL------- 135

Query: 127 RGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQYKLARSLFFCDAFN 186
                NV+ + NP+T  +F LP   SK       F  LG++P   +YK+       +   
Sbjct: 136 -ETSTNVMFIRNPITKSFFTLPKLDSKEGRPLTGF--LGYDPINGKYKVL--CILKERNK 195

Query: 187 VDIFAFGTSSEWTPV--GSLPYFINECHGAYFNGGLYWVG-FQQLFRSNAELSDFTDVIY 246
           + I   G    W  +  G L ++    +    +G +Y+ G F    R    +  F     
Sbjct: 196 IGILTLGAQESWRILSKGFLSHYKVTGYAKCIDGVIYYEGSFGDGLRQELAIMSF----- 255

Query: 247 RLDLEDEKFEQISFPLDGGDGDIVSPYIG-------VYNG-ALYLTLCYENFEFYVWK-- 306
             DL  EKF  I  P         S Y G       + +G +L++    +N + +++K  
Sbjct: 256 --DLRSEKFSLIKHPKKSSIATCWSSYEGRLALVSSIASGVSLWILEDADNHKQWIYKHF 315

Query: 307 -MEEDF---SWIKEFVLAPPETLYHSFRRHSPIDCHLQLIKPCEDGNILCLFAGLQLILY 357
               +F    W  + V    E +Y S+R +      L +     +G +  L+   +++  
Sbjct: 316 PSHREFIKERWKLKGVTRTGEFIYTSYRAYV-----LNV-----EGRV--LYQWFRILYV 350

BLAST of Lsi06G001700 vs. TAIR 10
Match: AT2G04920.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 2.8e-06
Identity = 66/262 (25.19%), Postives = 107/262 (40.84%), Query Frame = 0

Query: 11  SELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKFDPSISISDFFVAHFYSCRDRN 70
           S+LPPD+++ I S++P  +L   RF  + WN+L  + +F           +H    +D  
Sbjct: 2   SDLPPDLVEDILSRVPATSLKRLRFTCKQWNSLFKNRRFTEKHFCKAPKQSHVLLWKDYT 61

Query: 71  LHCVEFDPQHLKGMS----TVASFTFHHPEFSSGSCKISIINSCTGLLSLLITKRRRRGL 130
           + C      +  G S    +V S    H  ++S    I+ +  C GLL L  TK  R   
Sbjct: 62  V-CPMSINLNFSGSSIEFKSVLSLKDSH--YNSEQVYIAKVFHCDGLL-LCTTKDHR--- 121

Query: 131 KPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGF--NPRTKQYKLARSLFFCD---- 190
               + V NP   E         + D+     + LG+  N   + YK+ R  F+      
Sbjct: 122 ----LLVWNPCLGE---TRWINFENDYKPYSRFSLGYKNNKSCRSYKILR--FWTSYLTP 181

Query: 191 ---AFNVDIFAFGTSSEWTPV---GSLPYFINEC-HGAYFNGGLYWVGFQQLFRSNAELS 250
                  +I+ F T S W  +    SL YF+ E  +G  F G  YW+           L 
Sbjct: 182 NHIGLRYNIYEFTTDS-WRVLIDKVSLNYFLIESENGVSFKGNTYWLA----------LD 236

Query: 251 DFTDVIYRLDLEDEKFEQISFP 256
           + T+ +   D   E+F+++  P
Sbjct: 242 EETNFLLGFDFTMERFKRLCLP 236

BLAST of Lsi06G001700 vs. TAIR 10
Match: AT2G38590.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 49.7 bits (117), Expect = 6.2e-06
Identity = 66/263 (25.10%), Postives = 104/263 (39.54%), Query Frame = 0

Query: 11  SELPPDILQLIFSKLPFFNLPTCRFVSRSWNNLVLSCKF------------DPSISISDF 70
           S LP  +++ IF ++P  +L   R   +SWN L  S  F            + S+ I+  
Sbjct: 6   SNLPRVLIEEIFFRVPLKSLRAVRLTCKSWNTLSKSRSFRKLYISKRATREEESMMIA-- 65

Query: 71  FVAHFYSCRDRNLHCVEFDP-QHLKGMSTVASFTF-HHPEFSSGSCKISIINSCTGLLSL 130
            + +F     R +   + DP +  K      S  F   P F     KIS +  C GLL  
Sbjct: 66  -MMNFDLYSMRVVVDDDVDPSKAFKKKRNKKSIAFKRQPIFLDEQVKISQVFHCEGLLLC 125

Query: 131 LITKRRRRGLKPNVVCVLNPMTNEYFKLPTFRSKGDWNKNYFYGLGFNPRTKQ--YKLAR 190
            + +   R      V V NP   +   +    S       + Y LG+  +  +  ++L R
Sbjct: 126 FLKEDDTR------VVVWNPYCGQTRWIQLRYSHRPHKDRFIYALGYKDKESRGSFQLLR 185

Query: 191 SL-FFCDA-----FNVDIFAFGTSSEWTPVGSLPYFINEC--HGAYFNGGLYWVGFQQLF 250
            + +F  A     F  +I+ F + S WT +   P++   C   G   NG  YW   ++  
Sbjct: 186 FVDYFLGAPKNQYFWYEIYDFNSDS-WTTLDVTPHWCIYCCDRGVSLNGNTYWCAKER-- 245

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9SFC72.3e-1325.00F-box protein At3g07870 OS=Arabidopsis thaliana OX=3702 GN=At3g07870 PE=2 SV=1[more]
Q9FHS66.1e-0626.27F-box/kelch-repeat protein At5g43190 OS=Arabidopsis thaliana OX=3702 GN=At5g4319... [more]
Q9M0Q91.4e-0521.62Putative F-box protein At4g09190 OS=Arabidopsis thaliana OX=3702 GN=At4g09190 PE... [more]
Q9SI343.9e-0525.19Putative F-box only protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBX9 PE=4 SV=1[more]
Q9ZVI18.8e-0525.10F-box protein At2g38590 OS=Arabidopsis thaliana OX=3702 GN=At2g38590 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0M1M53.8e-16071.61F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G572960 PE=4 ... [more]
A0A5D3CIX99.4e-15168.77Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1... [more]
A0A1S3BQV89.4e-15168.77putative F-box protein At3g21120 OS=Cucumis melo OX=3656 GN=LOC103492215 PE=4 SV... [more]
A0A0A0KJY92.3e-10152.45F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G515480 PE=4 ... [more]
A0A5D3CM943.1e-10152.97Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2... [more]
Match NameE-valueIdentityDescription
XP_038880514.11.0e-17579.34putative F-box protein At1g46984 [Benincasa hispida][more]
XP_004135796.17.8e-16071.61putative F-box protein At1g46984 [Cucumis sativus] >KGN66126.1 hypothetical prot... [more]
XP_008450717.11.9e-15068.77PREDICTED: putative F-box protein At3g21120 [Cucumis melo] >TYK10199.1 putative ... [more]
XP_038883771.19.4e-10554.38putative F-box protein At1g60370 [Benincasa hispida][more]
XP_004134745.14.8e-10152.45F-box protein At3g07870 [Cucumis sativus] >XP_011658168.1 F-box protein At3g0787... [more]
Match NameE-valueIdentityDescription
AT3G07870.11.6e-1425.00F-box and associated interaction domains-containing protein [more]
AT5G43190.14.3e-0726.27Galactose oxidase/kelch repeat superfamily protein [more]
AT4G09190.19.6e-0721.62F-box and associated interaction domains-containing protein [more]
AT2G04920.12.8e-0625.19F-box and associated interaction domains-containing protein [more]
AT2G38590.16.2e-0625.10F-box and associated interaction domains-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 13..53
e-value: 1.6E-9
score: 47.6
IPR001810F-box domainPFAMPF00646F-boxcoord: 11..54
e-value: 2.0E-11
score: 43.5
IPR001810F-box domainPROSITEPS50181FBOXcoord: 7..44
score: 8.649649
NoneNo IPR availableGENE3D1.20.1280.50coord: 11..52
e-value: 1.7E-6
score: 30.0
NoneNo IPR availablePANTHERPTHR47993OS09G0372900 PROTEIN-RELATEDcoord: 17..324
NoneNo IPR availablePANTHERPTHR47993:SF20F-BOX FAMILY PROTEINcoord: 17..324
IPR017451F-box associated interaction domainTIGRFAMTIGR01640TIGR01640coord: 109..307
e-value: 5.1E-16
score: 56.7
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 104..354
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 11..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G001700.1Lsi06G001700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding