Lsi06G000180 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G000180
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Germin-like protein
Location	chr06: 181267 .. 182377 (+)
RNA-Seq Expression	Lsi06G000180
Synteny	Lsi06G000180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCCACCAACCAAACAATAATCCATGGCCTCCATTGCTCCCATTTCTCTCCTCACCTTTGCTCTCATTCTCACAATTTCTGCTGCAGACCTTGACTTGCTTCAAGATATTTGTGTCGCGGATCTCGCTTCTGGTATTTTCAACTTTTACTCCCTCTCCATTTCTTCACCTCATGATCTTTAGTCTAAGTGACTAATTTTGATAGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCCACCGACTTCTTCTTCAATGGACTTGCCAACCCCGGCCTCACCAACACTACGTCAGGTGCAGTGGTCACTGGAGCCAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACACCCCTGGTGGCCTCAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGACGTCGGCTTCATAACTACAACCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAAAAGAACAATGGGAAGGACGCTGCTGCAGTGATTGCGGCATTCAACAGCCAATTACCAGGAACCCAGTCTATTGCTACCACTCTATTTGCAGCAACTCCTTCAGTGCCGGATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAGAACTAAAACAAATGCTTCTTTTACACCTATAGTTTGCCCCAACATCAACATATACATACACAAATATCCTACTTCACATTCATGTTTCTTTCATATTCATCATTGTACCAATCCTAAAAATATCATTGTTCGTTTGATATATATTCTGTTCTACTCCGAATCTCAAACACTTAAACTAAGTACTTAAACTAAGTAAGTAAACATTTTCTGAGAAACAAAGGCATTCCGAAATTGTATATCAATCAAGGATATAGGTACACATCTTTCATAAAAAATAAAAAGAAAAGGTTATGCATGTTGCATATCAAGCAAGAACGTCTAACAAAAGTACATCCTCATAATTAATTTTAGGCCAGGCGTACTTCATGATAA

mRNA sequence

CATCCCACCAACCAAACAATAATCCATGGCCTCCATTGCTCCCATTTCTCTCCTCACCTTTGCTCTCATTCTCACAATTTCTGCTGCAGACCTTGACTTGCTTCAAGATATTTGTGTCGCGGATCTCGCTTCTGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCCACCGACTTCTTCTTCAATGGACTTGCCAACCCCGGCCTCACCAACACTACGTCAGGTGCAGTGGTCACTGGAGCCAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACACCCCTGGTGGCCTCAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGACGTCGGCTTCATAACTACAACCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAAAAGAACAATGGGAAGGACGCTGCTGCAGTGATTGCGGCATTCAACAGCCAATTACCAGGAACCCAGTCTATTGCTACCACTCTATTTGCAGCAACTCCTTCAGTGCCGGATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAGAACTAAAACAAATGCTTCTTTTACACCTATAGTTTGCCCCAACATCAACATATACATACACAAATATCCTACTTCACATTCATGTTTCTTTCATATTCATCATTGTACCAATCCTAAAAATATCATTGTTCGTTTGATATATATTCTGTTCTACTCCGAATCTCAAACACTTAAACTAAGTACTTAAACTAAGTAAGTAAACATTTTCTGAGAAACAAAGGCATTCCGAAATTGTATATCAATCAAGGATATAGGTACACATCTTTCATAAAAAATAAAAAGAAAAGGTTATGCATGTTGCATATCAAGCAAGAACGTCTAACAAAAGTACATCCTCATAATTAATTTTAGGCCAGGCGTACTTCATGATAA

Coding sequence (CDS)

ATGGCCTCCATTGCTCCCATTTCTCTCCTCACCTTTGCTCTCATTCTCACAATTTCTGCTGCAGACCTTGACTTGCTTCAAGATATTTGTGTCGCGGATCTCGCTTCTGGGATTAAAGTGAACGGGTTTGTATGCAAAACAAACATATCTGCCACCGACTTCTTCTTCAATGGACTTGCCAACCCCGGCCTCACCAACACTACGTCAGGTGCAGTGGTCACTGGAGCCAATGTCCAAAAAATCCCAGGCCTCAACACTCTAGGAGTGTCCCTCGCTCGCATTGACTACACCCCTGGTGGCCTCAATCCACCCCACACACACCCACGTGCCACCGAGATAGTGTTCGTTCTTGAAGGCGAGCTAGACGTCGGCTTCATAACTACAACCAACGTGTTGATATCCAAGTCCATCAAGAAGGGAGAAATATTTGTTTTCCCAAAGGGATTGGTGCACTTCCAAAAGAACAATGGGAAGGACGCTGCTGCAGTGATTGCGGCATTCAACAGCCAATTACCAGGAACCCAGTCTATTGCTACCACTCTATTTGCAGCAACTCCTTCAGTGCCGGATGACGTACTCACCAAGGCTTTCCAAGTTGGAACCAAGGAAGTTGAGAAAATCAAGTCTCGCTTTGCCCCCAAGAACTAA

Protein sequence

MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPKN

Homology

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BLAST of Lsi06G000180 vs. ExPASy Swiss-Prot
Match: Q6I544 (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.8e-79
Identity = 152/211 (72.04%), Postives = 176/211 (83.41%), Query Frame = 0


Query: 5   APISLLTFALILTIS-AADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPG 64
           A +++L  AL+ T S A D DLLQDICVADL S +KVNGF CK  ++  DF+F GLA  G
Sbjct: 9   AVVAVLLLALLPTPSTAGDPDLLQDICVADLTSAVKVNGFACKAAVTEDDFYFKGLAAAG 68

Query: 65  LTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDV 124
            TN T G+VVTGANV+K+PGLNTLGVS++RIDY PGGLNPPHTHPRATE+VFVL+G LDV
Sbjct: 69  NTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDV 128

Query: 125 GFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFA 184
           GFITT N L +K+I  G++FVFP+GL+HFQKNNG   AAVI+AFNSQLPGTQS+A TLFA
Sbjct: 129 GFITTANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFA 188

Query: 185 ATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           A+P VPD VLTKAFQVGTKEVEKIKSR APK
Sbjct: 189 ASPEVPDGVLTKAFQVGTKEVEKIKSRLAPK 219

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BLAST of Lsi06G000180 vs. ExPASy Swiss-Prot
Match: Q9S8P4 (Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2)

HSP 1 Score: 295.4 bits (755), Expect = 5.1e-79
Identity = 155/216 (71.76%), Postives = 176/216 (81.48%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           M  IA + L+  A   T +AAD D LQD+CVAD AS I VNGF CK  +N++A DFF N 
Sbjct: 1   MKLIAVLLLVVLATATTATAADADALQDLCVADYASVILVNGFACKPASNVTAEDFFSNL 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           L   G TN T G++VTGANVQ+IPGLNTLGVS+ARIDY PGGLNPPHTHPRATE+VFVLE
Sbjct: 61  LVKQGATNNTFGSLVTGANVQRIPGLNTLGVSMARIDYAPGGLNPPHTHPRATEMVFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           G+LDVGFITTTN LI+K+I KGE FVFPKGLVHFQKNNG + A VIA FNSQLPGT +I 
Sbjct: 121 GQLDVGFITTTNQLIAKTIAKGETFVFPKGLVHFQKNNGWEPATVIAGFNSQLPGTVNIP 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            TLF ATP VPD+VLTKAFQ+GTKEV+KIKS+FAPK
Sbjct: 181 LTLFNATPPVPDNVLTKAFQIGTKEVQKIKSKFAPK 216

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BLAST of Lsi06G000180 vs. ExPASy Swiss-Prot
Match: Q9M263 (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP10 PE=2 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 7.4e-78
Identity = 145/205 (70.73%), Postives = 172/205 (83.90%), Query Frame = 0


Query: 13  ALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTNTTSG 72
           +L + + A D D LQD+CVAD  SGIKVNGF CK  +NI+A+DFFF G+  P + N T G
Sbjct: 14  SLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVG 73

Query: 73  AVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTN 132
           + VTGANV+KI GLNTLGVSLARIDY PGGLNPPHTHPRATE++FVLEGELDVGFITT N
Sbjct: 74  SAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTAN 133

Query: 133 VLISKSIKKGEIFVFPKGLVHFQKNNGK-DAAAVIAAFNSQLPGTQSIATTLFAATPSVP 192
            L +K++KKGE+FVFP+GL+H+QKNN K   A+VI+AFNSQLPGTQSIA TLF ATP++P
Sbjct: 134 KLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIP 193

Query: 193 DDVLTKAFQVGTKEVEKIKSRFAPK 215
           D VLT  FQ+GTKE+EKIKS+FAPK
Sbjct: 194 DHVLTTTFQIGTKEIEKIKSKFAPK 218

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BLAST of Lsi06G000180 vs. ExPASy Swiss-Prot
Match: P94014 (Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4 PE=2 SV=2)

HSP 1 Score: 282.7 bits (722), Expect = 3.4e-75
Identity = 143/208 (68.75%), Postives = 166/208 (79.81%), Query Frame = 0


Query: 9   LLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTN 68
           LLT       S+AD D+LQD+CVADL SGIK+NGF CK    +++ DFF  GLA PGLTN
Sbjct: 11  LLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTN 70

Query: 69  TTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFI 128
            T GA+VTGANV  IPGLNTLGVSL+RIDY PGGLNPPHTHPRATE+VFVLEG LDVGF+
Sbjct: 71  NTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFL 130

Query: 129 TTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATP 188
           TT N LIS+S+KKG++F FPKGLVHFQKNNG   A+VIAAFNSQLPGTQS+  TLF +TP
Sbjct: 131 TTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTP 190

Query: 189 SVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            VPD++L +AFQ     V+ IKS+F PK
Sbjct: 191 PVPDNILAQAFQTSPGTVKHIKSKFQPK 218

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BLAST of Lsi06G000180 vs. ExPASy Swiss-Prot
Match: Q94EG3 (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 5.8e-75
Identity = 141/210 (67.14%), Postives = 172/210 (81.90%), Query Frame = 0


Query: 4   IAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLANPG 63
           +A + LL  ++     AAD D+LQD+CVADL S +KVNGF CKTN +A DF    ++ PG
Sbjct: 16  MAILFLLAISIDRYCFAADEDMLQDVCVADLHSKVKVNGFPCKTNFTAADFSSLAISKPG 75

Query: 64  LTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDV 123
            TN   G+VVT ANV+++PGLNTLGVSLARIDY PGG+NPPHTHPRA+E+VFV+EGELDV
Sbjct: 76  ATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDV 135

Query: 124 GFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFA 183
           GFITT NVL+SK I KGE+FVFP+GLVHFQKNNG+  AAVI+AFNSQLPGTQSI  TLF 
Sbjct: 136 GFITTANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFG 195

Query: 184 ATPSVPDDVLTKAFQVGTKEVEKIKSRFAP 214
           A+P VPDDVL + FQ+ T++V++IKS+FAP
Sbjct: 196 ASPPVPDDVLAQTFQINTEDVQQIKSKFAP 225

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BLAST of Lsi06G000180 vs. ExPASy TrEMBL
Match: A0A6J1HXU8 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469013 PE=3 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.2e-100
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MA IA IS+L FA+I T SAAD DLLQDICVADLASG KVNGFVCKTN+SATDFFF+GLA
Sbjct: 1   MAYIAAISVLVFAVIATSSAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDY PGGLNPPHTHPRATEIVFVLEG+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQ 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGK+AAAVIAAFNSQLPGTQS+A T
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

[Close]

BLAST of Lsi06G000180 vs. ExPASy TrEMBL
Match: A0A6J1EK67 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435222 PE=3 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.3e-100
Identity = 192/214 (89.72%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MA IA IS+L FA+I T  AAD DLLQDICVADLASG KVNGFVCKTN+SATDFFF+GLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDY PGGLNPPHTHPRATE+VFVLEG+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGK+AAAVIAAFNSQLPGTQS+A T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

[Close]

BLAST of Lsi06G000180 vs. ExPASy TrEMBL
Match: A0A6J1DTK8 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111024271 PE=3 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.7e-99
Identity = 192/214 (89.72%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MASIA IS+LTF +I+   AAD+DLLQDICVADL+SGIKVNGF CKTNISA DFFF+GLA
Sbjct: 1   MASIAAISVLTFVVIVGTCAADVDLLQDICVADLSSGIKVNGFPCKTNISAADFFFDGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTNTTSGA VTGANVQKIPGLNTLGVSLAR+DY PGGLNPPHTHPRATEIVFVLEGE
Sbjct: 61  KPGLTNTTSGAAVTGANVQKIPGLNTLGVSLARVDYAPGGLNPPHTHPRATEIVFVLEGE 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTK FQVGTKEV+KIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKGFQVGTKEVDKIKSRFAPK 214

[Close]

BLAST of Lsi06G000180 vs. ExPASy TrEMBL
Match: A0A6A1UFN8 (Germin-like protein OS=Morella rubra OX=262757 GN=CJ030_MR0G027019 PE=3 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 4.9e-93
Identity = 180/216 (83.33%), Postives = 195/216 (90.28%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           M +I P+ + TFAL+LT +AAD DLLQD+CVADL SG+KVNGF CK   NISA DFFF+G
Sbjct: 1   MVAIVPLLVTTFALVLTAAAADPDLLQDVCVADLTSGVKVNGFTCKDLANISAADFFFDG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           LA PGLTNTT G++VT ANVQKIPGLNTLGVSL+RIDY PGGLNPPHTHPRATEIVFVLE
Sbjct: 61  LAKPGLTNTTFGSLVTAANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIVFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           G LDVGFITT NVLISKSIKKGEIFVFP+GLVHFQKNNGK+ AAVIAAFNSQLPGTQSIA
Sbjct: 121 GGLDVGFITTANVLISKSIKKGEIFVFPRGLVHFQKNNGKEPAAVIAAFNSQLPGTQSIA 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           TTLFAATP +PD+VLTK FQVGTKEVEKIKSRFAPK
Sbjct: 181 TTLFAATPPIPDNVLTKTFQVGTKEVEKIKSRFAPK 216

[Close]

BLAST of Lsi06G000180 vs. ExPASy TrEMBL
Match: A0A5N6QL60 (Germin-like protein OS=Carpinus fangiana OX=176857 GN=FH972_004398 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 4.6e-91
Identity = 180/216 (83.33%), Postives = 192/216 (88.89%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKT--NISATDFFFNG 60
           MA++ P+ + TFAL+L  +AAD DLLQD+CVADL SGI VNGF CK+  NISA DF F G
Sbjct: 1   MAALVPLFVTTFALLLAAAAADPDLLQDVCVADLNSGINVNGFTCKSVANISAEDFSFGG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           LA PGLTN T G++VT ANVQKIPGLNTLGVSL+RIDY PGGLNPPHTHPRATEI FVLE
Sbjct: 61  LAKPGLTNNTFGSLVTAANVQKIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEIAFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGK  AAVI AFNSQLPGTQSIA
Sbjct: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKVPAAVIVAFNSQLPGTQSIA 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           TTLFAATP VPD+VLTKAFQVGTKEVEKIKSRFAPK
Sbjct: 181 TTLFAATPPVPDNVLTKAFQVGTKEVEKIKSRFAPK 216

[Close]

BLAST of Lsi06G000180 vs. NCBI nr
Match: XP_038878934.1 (germin-like protein 5-1 isoform X1 [Benincasa hispida])

HSP 1 Score: 387.1 bits (993), Expect = 9.8e-104
Identity = 202/214 (94.39%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MAS+APISLLTFALIL IS AD DLLQDICVADLASGIKVNGF CKTNISATDFFFNGLA
Sbjct: 1   MASMAPISLLTFALILAISTADFDLLQDICVADLASGIKVNGFACKTNISATDFFFNGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
           +PGLTNTTSGAVVTGANVQKI GLNTLGVSLARIDY PGGLNPPHTHPRATEIVFVLEG+
Sbjct: 61  SPGLTNTTSGAVVTGANVQKIQGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGK 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTKAFQVGTKEVEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEVEKIKSRFAPK 214

[Close]

BLAST of Lsi06G000180 vs. NCBI nr
Match: XP_038878935.1 (germin-like protein 5-1 isoform X2 [Benincasa hispida])

HSP 1 Score: 375.6 bits (963), Expect = 3.0e-100
Identity = 199/214 (92.99%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MAS+APISLLTFALIL IS AD DLLQDICVADLAS   VNGF CKTNISATDFFFNGLA
Sbjct: 1   MASMAPISLLTFALILAISTADFDLLQDICVADLAS---VNGFACKTNISATDFFFNGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
           +PGLTNTTSGAVVTGANVQKI GLNTLGVSLARIDY PGGLNPPHTHPRATEIVFVLEG+
Sbjct: 61  SPGLTNTTSGAVVTGANVQKIQGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGK 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTKAFQVGTKEVEKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEVEKIKSRFAPK 211

[Close]

BLAST of Lsi06G000180 vs. NCBI nr
Match: XP_022969982.1 (germin-like protein 5-1 [Cucurbita maxima])

HSP 1 Score: 374.4 bits (960), Expect = 6.6e-100
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MA IA IS+L FA+I T SAAD DLLQDICVADLASG KVNGFVCKTN+SATDFFF+GLA
Sbjct: 1   MAYIAAISVLVFAVIATSSAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDY PGGLNPPHTHPRATEIVFVLEG+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEIVFVLEGQ 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGK+AAAVIAAFNSQLPGTQS+A T
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

[Close]

BLAST of Lsi06G000180 vs. NCBI nr
Match: XP_022928396.1 (germin-like protein 5-1 [Cucurbita moschata])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 192/214 (89.72%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MA IA IS+L FA+I T  AAD DLLQDICVADLASG KVNGFVCKTN+SATDFFF+GLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDY PGGLNPPHTHPRATE+VFVLEG+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGK+AAAVIAAFNSQLPGTQS+A T
Sbjct: 121 LDVGFITTANVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

[Close]

BLAST of Lsi06G000180 vs. NCBI nr
Match: KAG6588513.1 (Germin-like protein 5-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.1 bits (954), Expect = 3.3e-99
Identity = 192/214 (89.72%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCKTNISATDFFFNGLA 60
           MA IA IS+L FA+I T  AAD DLLQDICVADLASG KVNGFVCKTN+SATDFFF+GLA
Sbjct: 1   MAYIAAISVLAFAVIATSCAADTDLLQDICVADLASGTKVNGFVCKTNVSATDFFFDGLA 60

Query: 61  NPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGE 120
            PGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDY PGGLNPPHTHPRATE+VFVLEG+
Sbjct: 61  KPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYAPGGLNPPHTHPRATEVVFVLEGQ 120

Query: 121 LDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATT 180
           LDVGFITT NVLISKSIKKGEIFVFPKGLVHFQKNNGK+AAAVIAAFNSQLPGTQS+A T
Sbjct: 121 LDVGFITTGNVLISKSIKKGEIFVFPKGLVHFQKNNGKEAAAVIAAFNSQLPGTQSLAAT 180

Query: 181 LFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           LFAATPSVPD+VLTKAFQVGTKE+EKIKSRFAPK
Sbjct: 181 LFAATPSVPDNVLTKAFQVGTKEIEKIKSRFAPK 214

[Close]

BLAST of Lsi06G000180 vs. TAIR 10
Match: AT3G62020.1 (germin-like protein 10 )

HSP 1 Score: 291.6 bits (745), Expect = 5.2e-79
Identity = 145/205 (70.73%), Postives = 172/205 (83.90%), Query Frame = 0


Query: 13  ALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTNTTSG 72
           +L + + A D D LQD+CVAD  SGIKVNGF CK  +NI+A+DFFF G+  P + N T G
Sbjct: 14  SLNVIVLAYDPDTLQDLCVADRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVG 73

Query: 73  AVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTN 132
           + VTGANV+KI GLNTLGVSLARIDY PGGLNPPHTHPRATE++FVLEGELDVGFITT N
Sbjct: 74  SAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTAN 133

Query: 133 VLISKSIKKGEIFVFPKGLVHFQKNNGK-DAAAVIAAFNSQLPGTQSIATTLFAATPSVP 192
            L +K++KKGE+FVFP+GL+H+QKNN K   A+VI+AFNSQLPGTQSIA TLF ATP++P
Sbjct: 134 KLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIP 193

Query: 193 DDVLTKAFQVGTKEVEKIKSRFAPK 215
           D VLT  FQ+GTKE+EKIKS+FAPK
Sbjct: 194 DHVLTTTFQIGTKEIEKIKSKFAPK 218

[Close]

BLAST of Lsi06G000180 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 282.7 bits (722), Expect = 2.4e-76
Identity = 143/208 (68.75%), Postives = 166/208 (79.81%), Query Frame = 0


Query: 9   LLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLANPGLTN 68
           LLT       S+AD D+LQD+CVADL SGIK+NGF CK    +++ DFF  GLA PGLTN
Sbjct: 11  LLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPGLTN 70

Query: 69  TTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGELDVGFI 128
            T GA+VTGANV  IPGLNTLGVSL+RIDY PGGLNPPHTHPRATE+VFVLEG LDVGF+
Sbjct: 71  NTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDVGFL 130

Query: 129 TTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTLFAATP 188
           TT N LIS+S+KKG++F FPKGLVHFQKNNG   A+VIAAFNSQLPGTQS+  TLF +TP
Sbjct: 131 TTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFGSTP 190

Query: 189 SVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            VPD++L +AFQ     V+ IKS+F PK
Sbjct: 191 PVPDNILAQAFQTSPGTVKHIKSKFQPK 218

[Close]

BLAST of Lsi06G000180 vs. TAIR 10
Match: AT1G02335.1 (germin-like protein subfamily 2 member 2 precursor )

HSP 1 Score: 279.6 bits (714), Expect = 2.1e-75
Identity = 142/213 (66.67%), Postives = 173/213 (81.22%), Query Frame = 0


Query: 4   IAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNGLAN 63
           I+ I  L+  +I +I A D D LQD+CVAD + G K+NGF CK   NI+ +DFFF G++ 
Sbjct: 6   ISIIIALSCIMITSIRAYDPDALQDLCVADKSHGTKLNGFPCKETLNITESDFFFAGISK 65

Query: 64  PGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLEGEL 123
           P + N+T G+ VTGANV+KIPGLNTL VSLARIDY PGGLNPPHTHPRATE+V+VLEGEL
Sbjct: 66  PAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGEL 125

Query: 124 DVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIATTL 183
           +VGFITT N L +K+IK GE+FVFP+GLVHFQKNNGK  A+V++AFNSQLPGT S+A TL
Sbjct: 126 EVGFITTANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATL 185

Query: 184 FAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
           FAA P++P+DVLTK FQVG+K V+KIK R A K
Sbjct: 186 FAAEPALPEDVLTKTFQVGSKMVDKIKERLATK 218

[Close]

BLAST of Lsi06G000180 vs. TAIR 10
Match: AT3G62020.2 (germin-like protein 10 )

HSP 1 Score: 273.9 bits (699), Expect = 1.1e-73
Identity = 133/181 (73.48%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 37  GIKVNGFVCK--TNISATDFFFNGLANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARI 96
           GIKVNGF CK  +NI+A+DFFF G+  P + N T G+ VTGANV+KI GLNTLGVSLARI
Sbjct: 9   GIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARI 68

Query: 97  DYTPGGLNPPHTHPRATEIVFVLEGELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQK 156
           DY PGGLNPPHTHPRATE++FVLEGELDVGFITT N L +K++KKGE+FVFP+GL+H+QK
Sbjct: 69  DYAPGGLNPPHTHPRATEVIFVLEGELDVGFITTANKLFAKTVKKGEVFVFPRGLIHYQK 128

Query: 157 NNGK-DAAAVIAAFNSQLPGTQSIATTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAP 215
           NN K   A+VI+AFNSQLPGTQSIA TLF ATP++PD VLT  FQ+GTKE+EKIKS+FAP
Sbjct: 129 NNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKFAP 188

[Close]

BLAST of Lsi06G000180 vs. TAIR 10
Match: AT5G26700.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 251.5 bits (641), Expect = 6.0e-67
Identity = 126/216 (58.33%), Postives = 169/216 (78.24%), Query Frame = 0


Query: 1   MASIAPISLLTFALILTISAADLDLLQDICVADLASGIKVNGFVCK--TNISATDFFFNG 60
           MAS A   L+    +L ++ A  ++LQD+CVADL++ +KVNG+ CK  T I+  DF+F G
Sbjct: 1   MASFA-THLVVVVTMLFVAMASAEMLQDVCVADLSNAVKVNGYTCKDSTQITPEDFYFKG 60

Query: 61  LANPGLTNTTSGAVVTGANVQKIPGLNTLGVSLARIDYTPGGLNPPHTHPRATEIVFVLE 120
           LAN   TNT++G+VVTGANV+K+PGLNTLG+S++RIDY P GLNPPH HPRA+EI+FVLE
Sbjct: 61  LANIAATNTSTGSVVTGANVEKLPGLNTLGLSMSRIDYAPNGLNPPHVHPRASEIIFVLE 120

Query: 121 GELDVGFITTTNVLISKSIKKGEIFVFPKGLVHFQKNNGKDAAAVIAAFNSQLPGTQSIA 180
           G+L VGF+TT   LI+K++ KG++F FPKGL+HFQKN     A+V+AAF+SQLPGTQS+ 
Sbjct: 121 GQLYVGFVTTAGKLIAKNLNKGDVFTFPKGLIHFQKNIANSPASVLAAFDSQLPGTQSLV 180

Query: 181 TTLFAATPSVPDDVLTKAFQVGTKEVEKIKSRFAPK 215
            +LF A   +PDD+L K+FQ+  K+V+KIK R+APK
Sbjct: 181 ASLFGA---LPDDILAKSFQLKHKQVKKIKLRYAPK 212

The following BLAST results are available for this feature:

BLAST of Lsi06G000180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6I544	1.8e-79	72.04	Germin-like protein 5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0277500...	[more]
Q9S8P4	5.1e-79	71.76	Rhicadhesin receptor OS=Pisum sativum OX=3888 GN=GER1 PE=1 SV=2	[more]
Q9M263	7.4e-78	70.73	Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana OX=3702 GN=GLP1...	[more]
P94014	3.4e-75	68.75	Germin-like protein subfamily 2 member 1 OS=Arabidopsis thaliana OX=3702 GN=GLP4...	[more]
Q94EG3	5.8e-75	67.14	Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae OX=164110 GN=NECI PE=1...	[more]

BLAST of Lsi06G000180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXU8	3.2e-100	90.65	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111469013 PE=3 SV=1	[more]
A0A6J1EK67	9.3e-100	89.72	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111435222 PE=3 SV=1	[more]
A0A6J1DTK8	2.7e-99	89.72	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111024271 PE=3 SV=1	[more]
A0A6A1UFN8	4.9e-93	83.33	Germin-like protein OS=Morella rubra OX=262757 GN=CJ030_MR0G027019 PE=3 SV=1	[more]
A0A5N6QL60	4.6e-91	83.33	Germin-like protein OS=Carpinus fangiana OX=176857 GN=FH972_004398 PE=3 SV=1	[more]

BLAST of Lsi06G000180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878934.1	9.8e-104	94.39	germin-like protein 5-1 isoform X1 [Benincasa hispida]	[more]
XP_038878935.1	3.0e-100	92.99	germin-like protein 5-1 isoform X2 [Benincasa hispida]	[more]
XP_022969982.1	6.6e-100	90.65	germin-like protein 5-1 [Cucurbita maxima]	[more]
XP_022928396.1	1.9e-99	89.72	germin-like protein 5-1 [Cucurbita moschata]	[more]
KAG6588513.1	3.3e-99	89.72	Germin-like protein 5-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lsi06G000180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62020.1	5.2e-79	70.73	germin-like protein 10	[more]
AT1G09560.1	2.4e-76	68.75	germin-like protein 5	[more]
AT1G02335.1	2.1e-75	66.67	germin-like protein subfamily 2 member 2 precursor	[more]
AT3G62020.2	1.1e-73	73.48	germin-like protein 10	[more]
AT5G26700.1	6.0e-67	58.33	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 105..125 score: 66.0 coord: 135..155 score: 55.7 coord: 168..183 score: 50.15
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 57..205 e-value: 1.7E-39 score: 147.2
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 59..204 e-value: 2.1E-47 score: 160.5
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 21..214 e-value: 2.1E-79 score: 267.6
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 8..212
None	No IPR available	PANTHER	PTHR31238:SF199	GERMIN-LIKE PROTEIN	coord: 8..212
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 22..211 e-value: 1.56723E-86 score: 252.131
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 100..113
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 23..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G000180.1	Lsi06G000180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:2000280	regulation of root development
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0030145	manganese ion binding