Lsi05G019990 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G019990
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionMyb-like protein X
Locationchr05: 27043079 .. 27045700 (-)
RNA-Seq ExpressionLsi05G019990
SyntenyLsi05G019990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTGCCCAAAAAATAATAAAAAGAAAAAAGAAAAAGAAAAAGAAAAAGGAAGCATCCTTGTTAGTTTCTTCTGTAACTCAAATCTCTCTGCCTTCTTTTGTCATTTTTCTTCAGCCATGGATGAAACACTGACACTCATCACAATAATCCTTAATTAATTCTTCAATATTTTCAACTCCATCTTCGAAATTGCCTCTCACTTTCCCATTTCCATCCATTTATATACATCCCATCACTCTCACTTCAATTTTCCATTCATTTCATTTTCTGCTCTGTTTTTCTTAATTCCCCTGTTCTTCAAGCTGCTTCAATGGCGGCGGCTACTCTCTCATTTTCCCCTTTTCCTTTCAATCGAGATGGATCCACTAGAATGCTCAAGGATTTTCTTCACGAAACCAATGCAAATGGAATCGCATCTTCTAAAACTAAACCGGCGTCGTTTAAGGCTCTGGCTATCCACGCCGTCGTCTCCGCCGTGAAGAGGATCTCGTTTCCGTCTGTGAAATCGCCAAGGATTTTCCCCAGAAGCCTTTCGCGGAGGCTGTTGAGGAAAACGGAGAGAAATGAGAGAGAAATCGGAGGCGATTTCGTTGTTAAGATTAAGGACATCATACGGTGGAAATCGTTCAGGGATTTGGTCGACGAGACGGCGGCGGCTCCTTCGCTTGATTTCGCCGATTCGCCGGATCATTACACGGCCGCCGCTATGACTACGACGACGACGACGACGACGACTAGCAGTTATAGTTCGAGCTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAGAGATTGGTCCGACGACGGTGCAGTGGGAAAAATGTATTTCCCATGTGTCGGTGAAGATTCGACGAAAACGATATTGGCACACGCAGAAAACGACAAAAAGGTGAGCAATAATTCAGTACTTCGCACATTTGGTGGAATTTGTCGTCGTCTGATTTTTATTATCACGTTTTGCCACCCTATGATCCGTTTTATGTGGTTGAGATTTAACAAGAGCGATTGTGAACCGTTAGATCAAATCAAATCTCTTTTAACAAAGCTAGATTCGTCCGTAGAGTACAAGTGGCACTGAGATTGGATATTTAAAAATTGGGGTTTTCTGAATTAATAATAAATTATATTACTTTCTATAATTTTTTCTTTTAAAAAAAATTAAACTTTAGTATTATGTATATTAACATAACTGATCAACTGGTCAAAAGTGGTCAAAAGAATATTTTATATTTGACTTATTTTCTAGATTTTTATCTTTTTATCTTATTATTATTATTATTTTTGTTTACTTCTTTCAACTTCTTACCTTTTTAAAAAAAAACTTAAAAAGAAATATTAAAGTCATTTTTTTAAAAGCTTTAATTGCCCTATAGTATTTATTTTCTAAACTAAGCCCATATTTACTAGTCCGTAATTAAATTTAATATAATTATAATAGATTTTTATTATTATTATTTATAATTCACATAATATCGTTAGCTAGTTTTTTGGTAACATATTTAAATGGGTCTCACTTTTCATATTACGATTAATTGATTACGTCATAAGAGAAATGTAACGTAAAAATTTGTTATTTTTATGTAAATTCAAATTAGGTATAATTTTTATTAAACAATTAGATTTGCAAATTATTAAAGTCTCGTTTTGATAACAATTTTGTTTTTTATTTTACATTTGAACATTGTGTTGGTTTTCTCACAACTTCTTACTTATGGTATTCATATTTCCTATCTAAAAAGCTCTAAGCGGATTTTCAAAAACAAAACTTTTTTTTTTTTGTTTTAACTTTCCAAATTTTGAAAACACTCATAAAATGGGTAGACAACAAAGCATAGAAAACGGTAAATGGAAGTGATTTTTGTAATCTTAATTTTCAAAAACTAAAGAAAAAAATTCTCTCCAATCTCAAAATCCTATTTCATTTCCAATCCTCAAAAAGTAACAACTTAGTATCATTTTACAGGTAGGTGTAAATGCAGTATCAAGACGTGACGATAAAGAAGAAGAACAAAAGATATTAGACGAAAGTGCACAGTGCCTATTAAAGCACGTGAATGAAGCAATTTCATTATCAAAAAATCGCAGATTGACAGAACATGATGGGTTGGATTGGTTGCTTCTAGAATTGTTTCGACCAGAAGTTGCATATTGTCAAGACGTGGATGAACGAGCAAGAAACAATGACAAAATTAGGGCAAATAAAGGCAAAGAAGATGAAGATGGCTATGATTGGTTTTTGTCTCACAAGGGGAAGGAAACTTATATGAGAGAAATGGAGAGGGAAGGAAAATGGGAGATTTTTGGTGTTGAGGAGAAAATTGAATTAGGATTAGAAATTGAAGGGGAAATTTTGGGATGTTTGGTTGATGAAATTCTACTTGATACTTTCTAATTATCACTAGAAAAATTTTTCCTTTTATTTTTATAGATTACTTCAAAATTCAAAATCCAAATATGTTGTTACAAAAGTTACTTTATTAGTTTCATTTTTTAGAAATTAACTTGTCTTATTAATCAATTTTTCTATTAAAAAAGTAGTTATTTTCAATATGGCAAAATCAGTCAACTTATTTATAAATATTAACAAAATGTCACTATCTATCAG

mRNA sequence

TATTTGCCCAAAAAATAATAAAAAGAAAAAAGAAAAAGAAAAAGAAAAAGGAAGCATCCTTGTTAGTTTCTTCTGTAACTCAAATCTCTCTGCCTTCTTTTGTCATTTTTCTTCAGCCATGGATGAAACACTGACACTCATCACAATAATCCTTAATTAATTCTTCAATATTTTCAACTCCATCTTCGAAATTGCCTCTCACTTTCCCATTTCCATCCATTTATATACATCCCATCACTCTCACTTCAATTTTCCATTCATTTCATTTTCTGCTCTGTTTTTCTTAATTCCCCTGTTCTTCAAGCTGCTTCAATGGCGGCGGCTACTCTCTCATTTTCCCCTTTTCCTTTCAATCGAGATGGATCCACTAGAATGCTCAAGGATTTTCTTCACGAAACCAATGCAAATGGAATCGCATCTTCTAAAACTAAACCGGCGTCGTTTAAGGCTCTGGCTATCCACGCCGTCGTCTCCGCCGTGAAGAGGATCTCGTTTCCGTCTGTGAAATCGCCAAGGATTTTCCCCAGAAGCCTTTCGCGGAGGCTGTTGAGGAAAACGGAGAGAAATGAGAGAGAAATCGGAGGCGATTTCGTTGTTAAGATTAAGGACATCATACGGTGGAAATCGTTCAGGGATTTGGTCGACGAGACGGCGGCGGCTCCTTCGCTTGATTTCGCCGATTCGCCGGATCATTACACGGCCGCCGCTATGACTACGACGACGACGACGACGACGACTAGCAGTTATAGTTCGAGCTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAGAGATTGGTCCGACGACGGTGCAGTGGGAAAAATGTATTTCCCATGTGTCGGTGAAGATTCGACGAAAACGATATTGGCACACGCAGAAAACGACAAAAAGGTAGGTGTAAATGCAGTATCAAGACGTGACGATAAAGAAGAAGAACAAAAGATATTAGACGAAAGTGCACAGTGCCTATTAAAGCACGTGAATGAAGCAATTTCATTATCAAAAAATCGCAGATTGACAGAACATGATGGGTTGGATTGGTTGCTTCTAGAATTGTTTCGACCAGAAGTTGCATATTGTCAAGACGTGGATGAACGAGCAAGAAACAATGACAAAATTAGGGCAAATAAAGGCAAAGAAGATGAAGATGGCTATGATTGGTTTTTGTCTCACAAGGGGAAGGAAACTTATATGAGAGAAATGGAGAGGGAAGGAAAATGGGAGATTTTTGGTGTTGAGGAGAAAATTGAATTAGGATTAGAAATTGAAGGGGAAATTTTGGGATGTTTGGTTGATGAAATTCTACTTGATACTTTCTAATTATCACTAGAAAAATTTTTCCTTTTATTTTTATAGATTACTTCAAAATTCAAAATCCAAATATGTTGTTACAAAAGTTACTTTATTAGTTTCATTTTTTAGAAATTAACTTGTCTTATTAATCAATTTTTCTATTAAAAAAGTAGTTATTTTCAATATGGCAAAATCAGTCAACTTATTTATAAATATTAACAAAATGTCACTATCTATCAG

Coding sequence (CDS)

ATGGCGGCGGCTACTCTCTCATTTTCCCCTTTTCCTTTCAATCGAGATGGATCCACTAGAATGCTCAAGGATTTTCTTCACGAAACCAATGCAAATGGAATCGCATCTTCTAAAACTAAACCGGCGTCGTTTAAGGCTCTGGCTATCCACGCCGTCGTCTCCGCCGTGAAGAGGATCTCGTTTCCGTCTGTGAAATCGCCAAGGATTTTCCCCAGAAGCCTTTCGCGGAGGCTGTTGAGGAAAACGGAGAGAAATGAGAGAGAAATCGGAGGCGATTTCGTTGTTAAGATTAAGGACATCATACGGTGGAAATCGTTCAGGGATTTGGTCGACGAGACGGCGGCGGCTCCTTCGCTTGATTTCGCCGATTCGCCGGATCATTACACGGCCGCCGCTATGACTACGACGACGACGACGACGACGACTAGCAGTTATAGTTCGAGCTGGTGCGAGAGCGATTTCACGGCGGAGGATTTGCCGTCGCCGTCGTGGAGAGATTGGTCCGACGACGGTGCAGTGGGAAAAATGTATTTCCCATGTGTCGGTGAAGATTCGACGAAAACGATATTGGCACACGCAGAAAACGACAAAAAGGTAGGTGTAAATGCAGTATCAAGACGTGACGATAAAGAAGAAGAACAAAAGATATTAGACGAAAGTGCACAGTGCCTATTAAAGCACGTGAATGAAGCAATTTCATTATCAAAAAATCGCAGATTGACAGAACATGATGGGTTGGATTGGTTGCTTCTAGAATTGTTTCGACCAGAAGTTGCATATTGTCAAGACGTGGATGAACGAGCAAGAAACAATGACAAAATTAGGGCAAATAAAGGCAAAGAAGATGAAGATGGCTATGATTGGTTTTTGTCTCACAAGGGGAAGGAAACTTATATGAGAGAAATGGAGAGGGAAGGAAAATGGGAGATTTTTGGTGTTGAGGAGAAAATTGAATTAGGATTAGAAATTGAAGGGGAAATTTTGGGATGTTTGGTTGATGAAATTCTACTTGATACTTTCTAA

Protein sequence

MAAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRISFPSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDETAAAPSLDFADSPDHYTAAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKMYFPCVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSKNRRLTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANKGKEDEDGYDWFLSHKGKETYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDTF
Homology
BLAST of Lsi05G019990 vs. ExPASy TrEMBL
Match: A0A1S3AVN8 (uncharacterized protein LOC103483313 OS=Cucumis melo OX=3656 GN=LOC103483313 PE=4 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.1e-136
Identity = 264/344 (76.74%), Postives = 293/344 (85.17%), Query Frame = 0

Query: 1   MAAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRIS 60
           MAA +LSF PFP NR+G TRMLKDFLHETN NGIASSK KP SFKALA HAVV+AVKRIS
Sbjct: 1   MAAPSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRIS 60

Query: 61  FPSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDE-TAAAPSL 120
           FPSVKSPRIFPRSLSRRLLRKTER+ERE GGDFVVKIKDIIRWKSFRDL+DE TAAAP L
Sbjct: 61  FPSVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPL 120

Query: 121 DFADSPDHYT---AAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKM 180
           DFA+SPD YT   AA  TTTTTTTT+SS SSSWCESDFTAEDLPSPSWRDWSDDG +GKM
Sbjct: 121 DFAESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKM 180

Query: 181 YFPCVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSK 240
           YF CVGEDST+T  AHA+NDK+VG+NA+SRR+DK EEQ++LDES + LL+ V   ISLS+
Sbjct: 181 YFRCVGEDSTETTAAHAKNDKEVGINALSRREDK-EEQEVLDESTRRLLEQVKGVISLSE 240

Query: 241 NRRLTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANKGKEDEDGYDWFLSHKGKE 300
           + RL EH GLD LL ELFR ++A  QD D      D+IR   GK+ E  YDWFLSHKGKE
Sbjct: 241 SCRLAEHCGLDGLLRELFRRDLASFQDDD------DRIRMKNGKDGEYVYDWFLSHKGKE 300

Query: 301 TYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDTF 341
           +Y+REMEREGKWEIFGV+EKI+LGLEIEGE+LGCLVDEILLD F
Sbjct: 301 SYVREMEREGKWEIFGVDEKIDLGLEIEGEVLGCLVDEILLDIF 337

BLAST of Lsi05G019990 vs. ExPASy TrEMBL
Match: A0A5A7TZF7 (Myb-like protein X OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004310 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 4.4e-136
Identity = 263/344 (76.45%), Postives = 292/344 (84.88%), Query Frame = 0

Query: 1   MAAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRIS 60
           MAA +LSF PFP NR+G TRMLKDFLHETN NGIASSK KP SFKALA HAVV+AVKRI 
Sbjct: 1   MAAPSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRIP 60

Query: 61  FPSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDE-TAAAPSL 120
           FPSVKSPRIFPRSLSRRLLRKTER+ERE GGDFVVKIKDIIRWKSFRDL+DE TAAAP L
Sbjct: 61  FPSVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPL 120

Query: 121 DFADSPDHYT---AAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKM 180
           DFA+SPD YT   AA  TTTTTTTT+SS SSSWCESDFTAEDLPSPSWRDWSDDG +GKM
Sbjct: 121 DFAESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKM 180

Query: 181 YFPCVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSK 240
           YF CVGEDST+T  AHA+NDK+VG+NA+SRR+DK EEQ++LDES + LL+ V   ISLS+
Sbjct: 181 YFRCVGEDSTETTAAHAKNDKEVGINALSRREDK-EEQEVLDESTRRLLEQVKGVISLSE 240

Query: 241 NRRLTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANKGKEDEDGYDWFLSHKGKE 300
           + RL EH GLD LL ELFR ++A  QD D      D+IR   GK+ E  YDWFLSHKGKE
Sbjct: 241 SCRLAEHCGLDGLLRELFRRDLASFQDDD------DRIRMKNGKDGEYVYDWFLSHKGKE 300

Query: 301 TYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDTF 341
           +Y+REMEREGKWEIFGV+EKI+LGLEIEGE+LGCLVDEILLD F
Sbjct: 301 SYVREMEREGKWEIFGVDEKIDLGLEIEGEVLGCLVDEILLDIF 337

BLAST of Lsi05G019990 vs. ExPASy TrEMBL
Match: A0A0A0L6C4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124790 PE=4 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 2.6e-133
Identity = 264/347 (76.08%), Postives = 292/347 (84.15%), Query Frame = 0

Query: 1   MAAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRIS 60
           MAA TLSF PFP NR+  TRMLKDFLHETN NG+AS K KP SFKALA HAVV+AVKRIS
Sbjct: 1   MAAPTLSFPPFPLNREAPTRMLKDFLHETNPNGLASPKPKPTSFKALAFHAVVAAVKRIS 60

Query: 61  FPSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDE-TAAAPSL 120
            PSVKSPRIFPRSLSRRLL+KTER+ERE GGDFVVKIKDIIRWKSFRDL+DE TAAAP L
Sbjct: 61  LPSVKSPRIFPRSLSRRLLKKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPL 120

Query: 121 DFADSPDH--YTAAAMTTTTTTTTT---SSYSSSWCESDFTAEDLPSPSWRDWSDDGAVG 180
           DFA+SPD   YTAAA TTTTTTTTT   SS SSSWCESDFTAEDL SPSWRDWSDDG +G
Sbjct: 121 DFAESPDRYTYTAAATTTTTTTTTTTTSSSKSSSWCESDFTAEDLASPSWRDWSDDGTMG 180

Query: 181 KMYFPCVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISL 240
           KMYFPCVGEDS +T  A+A+ND++  VNA+  R+D  EEQ++LDES + LL+ V  AISL
Sbjct: 181 KMYFPCVGEDSNETTAAYAQNDEE--VNALLIRED-NEEQEVLDESTRRLLEQVKGAISL 240

Query: 241 SKNRRLTEHDGLDWLLLELFRPEVAYCQDVDERARNND-KIRANKGKEDEDGYDWFLSHK 300
           SK+ RL E  GLDWL+ ELFR E+A  QDVDER RN+D +IR   GK+DE   DWFLSHK
Sbjct: 241 SKSCRLVERCGLDWLIRELFRRELADVQDVDERVRNDDRRIRVKNGKDDEYVCDWFLSHK 300

Query: 301 GKETYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDTF 341
           GKE+Y+REMEREGKWEIFGV+EKIELGLEIEGEILGCLVDEILLD F
Sbjct: 301 GKESYVREMEREGKWEIFGVDEKIELGLEIEGEILGCLVDEILLDIF 344

BLAST of Lsi05G019990 vs. ExPASy TrEMBL
Match: A0A6J1H9R7 (uncharacterized protein LOC111461748 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461748 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.2e-85
Identity = 201/363 (55.37%), Postives = 240/363 (66.12%), Query Frame = 0

Query: 2   AAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRISF 61
           AAA LSFSPF  +   STRMLKDFL E+N NG    ++K ASF           VKRISF
Sbjct: 3   AAAALSFSPFHLDDAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISF 62

Query: 62  PSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDETA--AAPSL 121
           PS+K  RI PRSLSRRL    ER+ERE GGDFVVK+KDIIRW+SFRDLVDETA  AAP L
Sbjct: 63  PSLKLRRILPRSLSRRLSGMRERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPL 122

Query: 122 DFADSPDHYTAAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKMYFP 181
           DFADSPD YTAAA TTTTTTT T+S SSSWCESDFTAEDLPSPSW+  SDD   GK+YF 
Sbjct: 123 DFADSPDRYTAAA-TTTTTTTATNSNSSSWCESDFTAEDLPSPSWKGCSDDDETGKVYFS 182

Query: 182 CVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSKNRR 241
           CVGED ++T + ++ENDKKV + +   + D + EQ     SA+ LL+ ++E ISLS++ +
Sbjct: 183 CVGEDLSETPVTNSENDKKVNLLSRDNKGDNKGEQ-----SARRLLERIDETISLSRSYK 242

Query: 242 LTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANK-------------------GK 301
           L E       L +  RP     +D +ER +NN   +A +                   G+
Sbjct: 243 LME-------LFQQERPYYRESEDDEERDKNNSTGKAKEDGNELFRREFSCYRDSKHDGE 302

Query: 302 EDE---DGYDWFLSHKGKETYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILL 341
            DE   + + W LS KGKE   REMEREGKW +FG EE+ ELGLEIEG I GCLVDEI+L
Sbjct: 303 RDESNGNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIML 337

BLAST of Lsi05G019990 vs. ExPASy TrEMBL
Match: A0A6J1HBH0 (uncharacterized protein LOC111461748 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461748 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 2.3e-84
Identity = 210/397 (52.90%), Postives = 243/397 (61.21%), Query Frame = 0

Query: 2   AAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRISF 61
           AAA LSFSPF  +   STRMLKDFL E+N NG    ++K ASF           VKRISF
Sbjct: 3   AAAALSFSPFHLDDAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISF 62

Query: 62  PSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDETA--AAPSL 121
           PS+K  RI PRSLSRRL    ER+ERE GGDFVVK+KDIIRW+SFRDLVDETA  AAP L
Sbjct: 63  PSLKLRRILPRSLSRRLSGMRERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPL 122

Query: 122 DFADSPDHYTAAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKMYFP 181
           DFADSPD YTAAA TTTTTTT T+S SSSWCESDFTAEDLPSPSW+  SDD   GK+YF 
Sbjct: 123 DFADSPDRYTAAA-TTTTTTTATNSNSSSWCESDFTAEDLPSPSWKGCSDDDETGKVYFS 182

Query: 182 CVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSKNRR 241
           CVGED ++T + ++ENDKKV + +   + D + EQ     SA+ LL+ ++E ISLS++ +
Sbjct: 183 CVGEDLSETPVTNSENDKKVNLLSRDNKGDNKGEQ-----SARRLLERIDETISLSRSYK 242

Query: 242 LTE----------------------------HDGLDWLLLELFRPEVAYCQDVD---ERA 301
           L E                             DG      ELFR E +Y Q  D   ER 
Sbjct: 243 LMELFQQERPYYRESEDDEERDKNNSTGKAKEDG-----NELFRREFSYQQASDNEEERD 302

Query: 302 RNNDKIRANKGKEDE----------------DG---------YDWFLSHKGKETYMREME 341
            NN KI     +EDE                DG         + W LS KGKE   REME
Sbjct: 303 NNNGKISTTGAEEDENELFRREFSCYRDSKHDGERDESNGNDFGWILSQKGKENLWREME 362

BLAST of Lsi05G019990 vs. NCBI nr
Match: XP_038880771.1 (uncharacterized protein LOC120072365 [Benincasa hispida])

HSP 1 Score: 527.3 bits (1357), Expect = 9.6e-146
Identity = 277/340 (81.47%), Postives = 301/340 (88.53%), Query Frame = 0

Query: 3   AATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRISFP 62
           AATLSF PFP +R GSTRMLKDFL ETNANGI SSK KPASFKALAIHAVV+AVKRISFP
Sbjct: 25  AATLSFPPFPLDRQGSTRMLKDFLQETNANGITSSKFKPASFKALAIHAVVAAVKRISFP 84

Query: 63  SVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDETAAAPSLDFA 122
           S+KSP+IFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDETAAAPSLDFA
Sbjct: 85  SMKSPKIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDETAAAPSLDFA 144

Query: 123 DSPDHYTAAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSD---DGAVGKMYFP 182
           DSPD YTAAA TTTTTTTTT SYSSSWCESDF AEDLPSPSWRDWS+   DGAVGKM+FP
Sbjct: 145 DSPDRYTAAA-TTTTTTTTTGSYSSSWCESDFMAEDLPSPSWRDWSEDGGDGAVGKMHFP 204

Query: 183 CVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSKNRR 242
           CVGEDS +T +A AENDKKV +NA+SRRDD  +EQ +LD+S + +L+ V EAISL KN R
Sbjct: 205 CVGEDSMETTVAFAENDKKVNINALSRRDD-NKEQNVLDKSTKWVLEDVEEAISLPKNGR 264

Query: 243 LTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANKGKEDEDGYDWFLSHKGKETYM 302
           LT+  G+D LLLE  R E+AY +D DER RN+DKIR  KGKE+EDG DWFLSHKGKETYM
Sbjct: 265 LTQSYGMDRLLLEFIRRELAYVRDDDERVRNDDKIRRKKGKEEEDGQDWFLSHKGKETYM 324

Query: 303 REMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDT 340
           REMEREGKWE+FGVEEKIELGL+ EGEILGCLVDEILLDT
Sbjct: 325 REMEREGKWEVFGVEEKIELGLQFEGEILGCLVDEILLDT 362

BLAST of Lsi05G019990 vs. NCBI nr
Match: XP_008438108.1 (PREDICTED: uncharacterized protein LOC103483313 [Cucumis melo])

HSP 1 Score: 496.1 bits (1276), Expect = 2.4e-136
Identity = 264/344 (76.74%), Postives = 293/344 (85.17%), Query Frame = 0

Query: 1   MAAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRIS 60
           MAA +LSF PFP NR+G TRMLKDFLHETN NGIASSK KP SFKALA HAVV+AVKRIS
Sbjct: 1   MAAPSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRIS 60

Query: 61  FPSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDE-TAAAPSL 120
           FPSVKSPRIFPRSLSRRLLRKTER+ERE GGDFVVKIKDIIRWKSFRDL+DE TAAAP L
Sbjct: 61  FPSVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPL 120

Query: 121 DFADSPDHYT---AAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKM 180
           DFA+SPD YT   AA  TTTTTTTT+SS SSSWCESDFTAEDLPSPSWRDWSDDG +GKM
Sbjct: 121 DFAESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKM 180

Query: 181 YFPCVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSK 240
           YF CVGEDST+T  AHA+NDK+VG+NA+SRR+DK EEQ++LDES + LL+ V   ISLS+
Sbjct: 181 YFRCVGEDSTETTAAHAKNDKEVGINALSRREDK-EEQEVLDESTRRLLEQVKGVISLSE 240

Query: 241 NRRLTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANKGKEDEDGYDWFLSHKGKE 300
           + RL EH GLD LL ELFR ++A  QD D      D+IR   GK+ E  YDWFLSHKGKE
Sbjct: 241 SCRLAEHCGLDGLLRELFRRDLASFQDDD------DRIRMKNGKDGEYVYDWFLSHKGKE 300

Query: 301 TYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDTF 341
           +Y+REMEREGKWEIFGV+EKI+LGLEIEGE+LGCLVDEILLD F
Sbjct: 301 SYVREMEREGKWEIFGVDEKIDLGLEIEGEVLGCLVDEILLDIF 337

BLAST of Lsi05G019990 vs. NCBI nr
Match: KAA0049003.1 (myb-like protein X [Cucumis melo var. makuwa] >TYK17561.1 myb-like protein X [Cucumis melo var. makuwa])

HSP 1 Score: 494.2 bits (1271), Expect = 9.0e-136
Identity = 263/344 (76.45%), Postives = 292/344 (84.88%), Query Frame = 0

Query: 1   MAAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRIS 60
           MAA +LSF PFP NR+G TRMLKDFLHETN NGIASSK KP SFKALA HAVV+AVKRI 
Sbjct: 1   MAAPSLSFPPFPLNREGPTRMLKDFLHETNPNGIASSKPKPTSFKALAFHAVVAAVKRIP 60

Query: 61  FPSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDE-TAAAPSL 120
           FPSVKSPRIFPRSLSRRLLRKTER+ERE GGDFVVKIKDIIRWKSFRDL+DE TAAAP L
Sbjct: 61  FPSVKSPRIFPRSLSRRLLRKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPL 120

Query: 121 DFADSPDHYT---AAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKM 180
           DFA+SPD YT   AA  TTTTTTTT+SS SSSWCESDFTAEDLPSPSWRDWSDDG +GKM
Sbjct: 121 DFAESPDRYTYTAAATTTTTTTTTTSSSKSSSWCESDFTAEDLPSPSWRDWSDDGTIGKM 180

Query: 181 YFPCVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSK 240
           YF CVGEDST+T  AHA+NDK+VG+NA+SRR+DK EEQ++LDES + LL+ V   ISLS+
Sbjct: 181 YFRCVGEDSTETTAAHAKNDKEVGINALSRREDK-EEQEVLDESTRRLLEQVKGVISLSE 240

Query: 241 NRRLTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANKGKEDEDGYDWFLSHKGKE 300
           + RL EH GLD LL ELFR ++A  QD D      D+IR   GK+ E  YDWFLSHKGKE
Sbjct: 241 SCRLAEHCGLDGLLRELFRRDLASFQDDD------DRIRMKNGKDGEYVYDWFLSHKGKE 300

Query: 301 TYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDTF 341
           +Y+REMEREGKWEIFGV+EKI+LGLEIEGE+LGCLVDEILLD F
Sbjct: 301 SYVREMEREGKWEIFGVDEKIDLGLEIEGEVLGCLVDEILLDIF 337

BLAST of Lsi05G019990 vs. NCBI nr
Match: XP_004133889.1 (uncharacterized protein LOC101208043 [Cucumis sativus] >KGN56559.1 hypothetical protein Csa_010102 [Cucumis sativus])

HSP 1 Score: 485.0 bits (1247), Expect = 5.5e-133
Identity = 264/347 (76.08%), Postives = 292/347 (84.15%), Query Frame = 0

Query: 1   MAAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRIS 60
           MAA TLSF PFP NR+  TRMLKDFLHETN NG+AS K KP SFKALA HAVV+AVKRIS
Sbjct: 1   MAAPTLSFPPFPLNREAPTRMLKDFLHETNPNGLASPKPKPTSFKALAFHAVVAAVKRIS 60

Query: 61  FPSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDE-TAAAPSL 120
            PSVKSPRIFPRSLSRRLL+KTER+ERE GGDFVVKIKDIIRWKSFRDL+DE TAAAP L
Sbjct: 61  LPSVKSPRIFPRSLSRRLLKKTERDERETGGDFVVKIKDIIRWKSFRDLIDETTAAAPPL 120

Query: 121 DFADSPDH--YTAAAMTTTTTTTTT---SSYSSSWCESDFTAEDLPSPSWRDWSDDGAVG 180
           DFA+SPD   YTAAA TTTTTTTTT   SS SSSWCESDFTAEDL SPSWRDWSDDG +G
Sbjct: 121 DFAESPDRYTYTAAATTTTTTTTTTTTSSSKSSSWCESDFTAEDLASPSWRDWSDDGTMG 180

Query: 181 KMYFPCVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISL 240
           KMYFPCVGEDS +T  A+A+ND++  VNA+  R+D  EEQ++LDES + LL+ V  AISL
Sbjct: 181 KMYFPCVGEDSNETTAAYAQNDEE--VNALLIRED-NEEQEVLDESTRRLLEQVKGAISL 240

Query: 241 SKNRRLTEHDGLDWLLLELFRPEVAYCQDVDERARNND-KIRANKGKEDEDGYDWFLSHK 300
           SK+ RL E  GLDWL+ ELFR E+A  QDVDER RN+D +IR   GK+DE   DWFLSHK
Sbjct: 241 SKSCRLVERCGLDWLIRELFRRELADVQDVDERVRNDDRRIRVKNGKDDEYVCDWFLSHK 300

Query: 301 GKETYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILLDTF 341
           GKE+Y+REMEREGKWEIFGV+EKIELGLEIEGEILGCLVDEILLD F
Sbjct: 301 GKESYVREMEREGKWEIFGVDEKIELGLEIEGEILGCLVDEILLDIF 344

BLAST of Lsi05G019990 vs. NCBI nr
Match: XP_022961277.1 (uncharacterized protein LOC111461748 isoform X2 [Cucurbita moschata])

HSP 1 Score: 326.6 bits (836), Expect = 2.5e-85
Identity = 201/363 (55.37%), Postives = 240/363 (66.12%), Query Frame = 0

Query: 2   AAATLSFSPFPFNRDGSTRMLKDFLHETNANGIASSKTKPASFKALAIHAVVSAVKRISF 61
           AAA LSFSPF  +   STRMLKDFL E+N NG    ++K ASF           VKRISF
Sbjct: 3   AAAALSFSPFHLDDAASTRMLKDFLQESNGNG----ESKTASF-----------VKRISF 62

Query: 62  PSVKSPRIFPRSLSRRLLRKTERNEREIGGDFVVKIKDIIRWKSFRDLVDETA--AAPSL 121
           PS+K  RI PRSLSRRL    ER+ERE GGDFVVK+KDIIRW+SFRDLVDETA  AAP L
Sbjct: 63  PSLKLRRILPRSLSRRLSGMRERDERETGGDFVVKVKDIIRWRSFRDLVDETAEMAAPPL 122

Query: 122 DFADSPDHYTAAAMTTTTTTTTTSSYSSSWCESDFTAEDLPSPSWRDWSDDGAVGKMYFP 181
           DFADSPD YTAAA TTTTTTT T+S SSSWCESDFTAEDLPSPSW+  SDD   GK+YF 
Sbjct: 123 DFADSPDRYTAAA-TTTTTTTATNSNSSSWCESDFTAEDLPSPSWKGCSDDDETGKVYFS 182

Query: 182 CVGEDSTKTILAHAENDKKVGVNAVSRRDDKEEEQKILDESAQCLLKHVNEAISLSKNRR 241
           CVGED ++T + ++ENDKKV + +   + D + EQ     SA+ LL+ ++E ISLS++ +
Sbjct: 183 CVGEDLSETPVTNSENDKKVNLLSRDNKGDNKGEQ-----SARRLLERIDETISLSRSYK 242

Query: 242 LTEHDGLDWLLLELFRPEVAYCQDVDERARNNDKIRANK-------------------GK 301
           L E       L +  RP     +D +ER +NN   +A +                   G+
Sbjct: 243 LME-------LFQQERPYYRESEDDEERDKNNSTGKAKEDGNELFRREFSCYRDSKHDGE 302

Query: 302 EDE---DGYDWFLSHKGKETYMREMEREGKWEIFGVEEKIELGLEIEGEILGCLVDEILL 341
            DE   + + W LS KGKE   REMEREGKW +FG EE+ ELGLEIEG I GCLVDEI+L
Sbjct: 303 RDESNGNDFGWILSQKGKENLWREMEREGKWGVFGNEEREELGLEIEGGIFGCLVDEIML 337

BLAST of Lsi05G019990 vs. TAIR 10
Match: AT4G00770.1 (unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source: NCBI BLink). )

HSP 1 Score: 72.4 bits (176), Expect = 7.9e-13
Identity = 96/327 (29.36%), Postives = 150/327 (45.87%), Query Frame = 0

Query: 19  TRMLKDFLHE----TNANGIASSKTK---------PASFKALAIHAVVSAVKRISFPSVK 78
           +RMLKD L E     ++NG  S   +         P   ++ A+ AV++A+K +   ++K
Sbjct: 5   SRMLKDCLLEDSNSCSSNGFKSIPRRHPLNPFPMIPKRKQSNALQAVINAIKNLHSNTIK 64

Query: 79  S--PRIFPRSLSRRLLRKTE-RNEREIGGDFVVKIKDIIRWKSFRDLVDETAAAPSLDFA 138
           S    I PRSLSRRL  K +  N+  I    V+++KDI+RW S +DL ++ +        
Sbjct: 65  SAPSGILPRSLSRRLATKNKAENQASI---TVIRVKDIVRWHSSKDLHEDISHF------ 124

Query: 139 DSPDHYTAAAMTTTTTTTTTSSYS-SSWCESDFTAEDLPSPSW----RDWSDDGAVGKMY 198
             P  YT    TTTT ++TTS  S SSW + DFT+E LPS SW     +  +  +V K  
Sbjct: 125 -EPHQYTTKNTTTTTGSSTTSGTSCSSWSDLDFTSEFLPS-SWGSNVEECGEKQSV-KNN 184

Query: 199 FPCVGEDS-TKTILAHAENDKKVGVNAVSRRDDK----EEEQKILDESAQCLLKHVNEAI 258
             CVGEDS T  ILA  E   +  +      +      E + +  DE++        + +
Sbjct: 185 LHCVGEDSCTAVILADTEVGPEENLQCEKEHNSPVSVFEIQHEEYDETSDSSFSQCLDNV 244

Query: 259 SLSKNRRLTEHDGLDWL-------LLELFRPEVAYC----QDVDERARNNDKIRANKGKE 309
             +K + +      + L       L E    + A C    Q+ D +  ++D+      +E
Sbjct: 245 ERTKQKLMQTIQRFESLANISPFNLDEWGSMDEASCMEGGQETDTK-YDDDENCDTVDRE 304

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3AVN81.1e-13676.74uncharacterized protein LOC103483313 OS=Cucumis melo OX=3656 GN=LOC103483313 PE=... [more]
A0A5A7TZF74.4e-13676.45Myb-like protein X OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G0... [more]
A0A0A0L6C42.6e-13376.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124790 PE=4 SV=1[more]
A0A6J1H9R71.2e-8555.37uncharacterized protein LOC111461748 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1HBH02.3e-8452.90uncharacterized protein LOC111461748 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
Match NameE-valueIdentityDescription
XP_038880771.19.6e-14681.47uncharacterized protein LOC120072365 [Benincasa hispida][more]
XP_008438108.12.4e-13676.74PREDICTED: uncharacterized protein LOC103483313 [Cucumis melo][more]
KAA0049003.19.0e-13676.45myb-like protein X [Cucumis melo var. makuwa] >TYK17561.1 myb-like protein X [Cu... [more]
XP_004133889.15.5e-13376.08uncharacterized protein LOC101208043 [Cucumis sativus] >KGN56559.1 hypothetical ... [more]
XP_022961277.12.5e-8555.37uncharacterized protein LOC111461748 isoform X2 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT4G00770.17.9e-1329.36unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; B... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33623:SF17DUF4378 DOMAIN PROTEINcoord: 2..191
NoneNo IPR availablePANTHERPTHR33623OS04G0572500 PROTEINcoord: 206..339
NoneNo IPR availablePANTHERPTHR33623OS04G0572500 PROTEINcoord: 2..191
NoneNo IPR availablePANTHERPTHR33623:SF17DUF4378 DOMAIN PROTEINcoord: 206..339

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G019990.1Lsi05G019990.1mRNA