Lsi05G015060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G015060
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CASP-like protein
Location	chr05: 22872538 .. 22874304 (+)
RNA-Seq Expression	Lsi05G015060
Synteny	Lsi05G015060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGTGGTGGGAAATTAGAAGTGATTCTTAGGGTTTTGGGAATTTTATTGAGTTTTGTGGCAGCTATTGTTGTGGGAGTTGACAAAGAAACAAAAGTCATTCCTATTACTATCTCCTCCAATCTTCCTCCTTTTGAAATCGTTGTGGTTGCTAAGTGGCATTATTTATCAGCTTTTGTGTAAGTTTCTTATCTCCTTCTTTCTATTTATACTTCTCTCTCGTCGATTCTCGGTTTAGTTTGAAATGACTTTTGAGAAGAGTATTTTTATTCGAGTTAATTTCTTTGAAAAAAATTGATTCATTGTTTGTTTATACCTAGTATTTGAGTGGTGTTGAATATTGCTTTGACTCTTTTTTTAAGAAAATATTTTGAACAAAATACACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGTTCATGAAGATATGAGTTTGTGTCTTATTTGGTATTTTTGAAGTTTTCAATTCTGGTATCTGAACTTTTGATTGTGTTGTTTAATACTATGAAATATTTTAATATTTTAAAAATTATTTGCTCTATTAGATATATATAATTGATTAAAATATCATTTTAGTTTTTATACTTTGGAGTTTGTTCAATTTTTAGTTTCTATATTTTCAAATGTTCAATTTTAGTGTATGTACTTTTAATAAATCTTAAATTTAGTCCCTACTACTAGTTTATTATGGATTTTTTTCATTATTTTTTTTTATTTTTTATTAGCATTTTCACAATAAATTTTGAAAATATATTCACATATTTTATTTTTTTGCATGAAAATTATTGTGATTATTTAATCAATTGTGATAAAAATTAACTTTGAGGGATTAAATTTAAGATTTAGTGAAAATATAAGGACTAAAATTGAATATTTGAAAGTATAAAGACTAATGGAACTTTAAGTTGTTAATTTTATGTCTAGTAAGTCCATGAAAGATCGAGAACTAAATACATCCAAATCACAAAGTTCAAAGTTTAATAACTAAATTTATAATTTAACCTTTGAAATAAACATTTTTAGTCTCTAAAGTTTGAAAAATGGTTTTCAATGGATTGAAAGACTATTTAAAAACATTTTTTAAAATAGTAGAGACTAAAAGTGTTCATTATTTAGAACTAACCGTTAAATTAGGTTGAATGGCCATTTAGAACTAGATTTTCAAACGCTAAGTTTAAAAACTTAATTAAGAACCAAATAAATACTAACCACAAATTTCAAGAACTAAAAACATTTTTGCTGGTGATTTTTTTAAGACTAAAATGGTTCAATTTCTCAACATTCTAAGGCAAATTAATGAAGCAATTCATATAAACCTAAACTAACTCAAAATTTATTTATTATTTGTTCATTACTCCTAATTAATTAAGTAAAAACATTGGAATTAAACCATATATATTTATTTACCTTTTTTTGAAGGTTCCTTTTCGCAGCAAATGTAATAACAAGTTCATATGGATTGTTATCGTTGATGCTTACATTAAGCAACAAGAATCAGAGCAATAATATGTTTTTACTGATCATCGTTCTCGACACCGTGACGGTGGCGCTGCTCTCCTCCGGCGCCGGCGCCGCCATGGCCATCGGAGTTATGGGCTATCAGGGCAACTCGCACGTGCGGTGGAACAAAGTGTGCAATACATTTGGTAGATTTTGCAAGCAAGTGGCAACTTCTGCCGTTTTCTCCCTCGCCGGAGCCATCGTATTTATGTCGCTGGTTATATTGGCTGTTGTGGGCCTACAGAAGAGGCCCAAATAA

mRNA sequence

ATGAGTAGTGGTGGGAAATTAGAAGTGATTCTTAGGGTTTTGGGAATTTTATTGAGTTTTGTGGCAGCTATTGTTGTGGGAGTTGACAAAGAAACAAAAGTCATTCCTATTACTATCTCCTCCAATCTTCCTCCTTTTGAAATCGTTGTGGTTGCTAAGTGGCATTATTTATCAGCTTTTGTGTTCCTTTTCGCAGCAAATGTAATAACAAGTTCATATGGATTGTTATCGTTGATGCTTACATTAAGCAACAAGAATCAGAGCAATAATATGTTTTTACTGATCATCGTTCTCGACACCGTGACGGTGGCGCTGCTCTCCTCCGGCGCCGGCGCCGCCATGGCCATCGGAGTTATGGGCTATCAGGGCAACTCGCACGTGCGGTGGAACAAAGTGTGCAATACATTTGGTAGATTTTGCAAGCAAGTGGCAACTTCTGCCGTTTTCTCCCTCGCCGGAGCCATCGTATTTATGTCGCTGGTTATATTGGCTGTTGTGGGCCTACAGAAGAGGCCCAAATAA

Coding sequence (CDS)

ATGAGTAGTGGTGGGAAATTAGAAGTGATTCTTAGGGTTTTGGGAATTTTATTGAGTTTTGTGGCAGCTATTGTTGTGGGAGTTGACAAAGAAACAAAAGTCATTCCTATTACTATCTCCTCCAATCTTCCTCCTTTTGAAATCGTTGTGGTTGCTAAGTGGCATTATTTATCAGCTTTTGTGTTCCTTTTCGCAGCAAATGTAATAACAAGTTCATATGGATTGTTATCGTTGATGCTTACATTAAGCAACAAGAATCAGAGCAATAATATGTTTTTACTGATCATCGTTCTCGACACCGTGACGGTGGCGCTGCTCTCCTCCGGCGCCGGCGCCGCCATGGCCATCGGAGTTATGGGCTATCAGGGCAACTCGCACGTGCGGTGGAACAAAGTGTGCAATACATTTGGTAGATTTTGCAAGCAAGTGGCAACTTCTGCCGTTTTCTCCCTCGCCGGAGCCATCGTATTTATGTCGCTGGTTATATTGGCTGTTGTGGGCCTACAGAAGAGGCCCAAATAA

Protein sequence

MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLFAANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK

Homology

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BLAST of Lsi05G015060 vs. ExPASy Swiss-Prot
Match: C6TBD0 (CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.9e-40
Identity = 83/167 (49.70%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 5   GKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLF 64
           G  +++LR+L   ++ VAAIV+ VDK+TK++PI +S + PP  + + AKWH +SAFV+  
Sbjct: 21  GVCDLLLRLLAFTVTLVAAIVIAVDKQTKLVPIQLSDSFPPLNVPLTAKWHQMSAFVYFL 80

Query: 65  AANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQGN 124
             N I  +Y  +SL+L L N+ +S  ++ LI VLDT  VALL SG GAA A+G++GY+GN
Sbjct: 81  VTNAIACTYAAMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFSGNGAAAAVGILGYKGN 140

Query: 125 SHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKR 172
           SHV WNKVCN FG+FC Q+A S   SL G++ F+ LV++ VV L +R
Sbjct: 141 SHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVVIPVVRLHRR 187

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BLAST of Lsi05G015060 vs. ExPASy Swiss-Prot
Match: C6SZP8 (CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-39
Identity = 85/167 (50.90%), Postives = 118/167 (70.66%), Query Frame = 0


Query: 5   GKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLF 64
           G  +++LR+L   ++ VAAIV+ VDK+TKV+PI +S +LPP ++ + AKWH +SA V+  
Sbjct: 20  GVSDLLLRLLAFTVTLVAAIVIAVDKQTKVVPIQLSDSLPPLDVPLTAKWHQMSAIVYFL 79

Query: 65  AANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQGN 124
             N I  +Y +LSL+L L N+ +S  ++ LI VLD   VALL SG GAA A+GV+GY+GN
Sbjct: 80  VTNAIACTYAVLSLLLALVNRGKSKGLWTLIAVLDAFMVALLFSGNGAAAAVGVLGYKGN 139

Query: 125 SHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKR 172
           SHV WNKVCN FG+FC Q+A S   SL G++ F+ LVI+  V L +R
Sbjct: 140 SHVNWNKVCNVFGKFCDQMAASIGVSLIGSLAFLLLVIIPGVRLHRR 186

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BLAST of Lsi05G015060 vs. ExPASy Swiss-Prot
Match: B9HMP6 (CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-38
Identity = 89/166 (53.61%), Postives = 117/166 (70.48%), Query Frame = 0


Query: 8   EVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLFAAN 67
           +++LRVL ++L+  AAIV+GVDK+TKV+PI I   LP   + V AKWHYLSAF +  A+N
Sbjct: 31  DLLLRVLALVLTLAAAIVLGVDKQTKVVPIKIVDTLPAINLPVSAKWHYLSAFTYSVASN 90

Query: 68  VITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQGNSHV 127
            I  SY  LSL+L +S K     +  ++IVLD + VA+L S  GAA+AIG+MGYQGNSHV
Sbjct: 91  AIACSYAALSLVLAVSGK---KGIMSIVIVLDLLMVAMLFSSNGAALAIGLMGYQGNSHV 150

Query: 128 RWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           RW KVC+ FGRFC QVA S   SL G+I+F+ LV +  + L K+ K
Sbjct: 151 RWTKVCHVFGRFCNQVAVSISLSLLGSILFLLLVGITSLRLHKKSK 193

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BLAST of Lsi05G015060 vs. ExPASy Swiss-Prot
Match: B9RT04 (CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-38
Identity = 88/165 (53.33%), Postives = 116/165 (70.30%), Query Frame = 0


Query: 9   VILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLFAANV 68
           ++LRVL  +L+  AAIV GV+ +T+ +PI ++S++PP  + VVAKWHYLSAFVF   +N 
Sbjct: 31  LVLRVLAFVLTSTAAIVHGVNNQTETVPIQLTSSMPPLYVPVVAKWHYLSAFVFFVVSNA 90

Query: 69  ITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQGNSHVR 128
           I  SY  +S+ML+   K    +M  +I+ LD + VALL S  GAA AIGVMGY+GNSHV+
Sbjct: 91  IACSYAAISVMLSFCGK---KSMVPIILTLDLLMVALLFSSNGAATAIGVMGYKGNSHVK 150

Query: 129 WNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           WNKVCN FG+FC QVA S V SL G+IVF+ LV+L    L  + K
Sbjct: 151 WNKVCNVFGKFCNQVAASVVLSLIGSIVFVLLVMLTAFRLHNKSK 192

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BLAST of Lsi05G015060 vs. ExPASy Swiss-Prot
Match: A7NW78 (CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.3e-37
Identity = 85/172 (49.42%), Postives = 116/172 (67.44%), Query Frame = 0


Query: 3   SGGKL---EVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSA 62
           +GGKL   +++LRV+ + L+ VAA+++GVDK+TKV+ + +   LPP ++ V AKW YLSA
Sbjct: 23  TGGKLRPFDLVLRVVALALTLVAAVLLGVDKQTKVVSLQLLPTLPPMDVPVTAKWRYLSA 82

Query: 63  FVFLFAANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVM 122
           FV+   +N I  SY  LSL+L++ N   +  + L I V+D V VALL S  GAA AIG+M
Sbjct: 83  FVYFVVSNAIACSYAALSLLLSVGNSKGNKGLGLAITVMDLVMVALLFSSNGAAGAIGLM 142

Query: 123 GYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKR 172
           GY+GNS VRW KVCN FG+FC QVA +   S  G + F  LV++A   L KR
Sbjct: 143 GYEGNSRVRWGKVCNVFGKFCNQVAVALGLSFFGGLAFFLLVVMAAFALNKR 194

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BLAST of Lsi05G015060 vs. ExPASy TrEMBL
Match: A0A0A0L8Y1 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151500 PE=3 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 144/174 (82.76%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS  GKLEVILRVLG LLS VAAIV+GVDKETKV+PITISSNLPPF IVVVAKWHY+SAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMF-LLIIVLDTVTVALLSSGAGAAMAIGVM 120
           V+L A NVI SSYGLLSLMLTLSNKN+SNN+  LLIIVLDTVTVALLSSG GAA+AIGVM
Sbjct: 61  VYLLATNVIASSYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVM 120

Query: 121 GYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           GY+GNSHV WNKVC+TFGRFCKQVA SA+ SLAGAIVF+ L+ILA+VGL KR K
Sbjct: 121 GYEGNSHVGWNKVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

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BLAST of Lsi05G015060 vs. ExPASy TrEMBL
Match: A0A5A7U2H8 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00470 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.8e-65
Identity = 142/174 (81.61%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS  GKLEVILRVLG LLS VAAIVVGVDKETKV+P+TISSNLPPF IVVVAKW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMF-LLIIVLDTVTVALLSSGAGAAMAIGVM 120
           V+ FA NVI S YGLLSLMLTLSNKN SNN+  LL+IVLDTV+VALLSSGAGAAMAIGV+
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 121 GYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
            Y+GNSHVRWNKVC+ FG+FCKQVA SA+ SLAGAIVF+ LVILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

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BLAST of Lsi05G015060 vs. ExPASy TrEMBL
Match: A0A1S3AXE2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483800 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.8e-65
Identity = 142/174 (81.61%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS  GKLEVILRVLG LLS VAAIVVGVDKETKV+P+TISSNLPPF IVVVAKW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMF-LLIIVLDTVTVALLSSGAGAAMAIGVM 120
           V+ FA NVI S YGLLSLMLTLSNKN SNN+  LL+IVLDTV+VALLSSGAGAAMAIGV+
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 121 GYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
            Y+GNSHVRWNKVC+ FG+FCKQVA SA+ SLAGAIVF+ LVILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

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BLAST of Lsi05G015060 vs. ExPASy TrEMBL
Match: A0A6J1G003 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.3e-59
Identity = 127/173 (73.41%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS GGKLE +LRVLG +L+ VAAIVV +DKETKV+P +IS NLP F++VVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMG 120
           V+LFAANVI S YGLL+L ++L+NKN+SN + LLI +LD V V LLSS AGAA+AIG++G
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 121 YQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           Y GNSHVRWNKVC+TFGRFCKQVA ++  SLAGAIVFM LVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

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BLAST of Lsi05G015060 vs. ExPASy TrEMBL
Match: A0A6J1C8J2 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009367 PE=3 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.1e-58
Identity = 128/173 (73.99%), Postives = 145/173 (83.82%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS G KLEV+LRVLG +LSFVAAIVVG+DK+TKVI        P  ++VV AKWHYLSAF
Sbjct: 1   MSGGVKLEVVLRVLGFVLSFVAAIVVGLDKQTKVI--------PALDLVVSAKWHYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMG 120
           V+LFA ++ITSSYGLLSL+LTL+NKNQSN   LL+IVLDTV VALLSSG GAAMAIG++G
Sbjct: 61  VYLFAVDIITSSYGLLSLLLTLTNKNQSNTSILLLIVLDTVMVALLSSGGGAAMAIGMIG 120

Query: 121 YQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           Y GNSHV WNKVC+ FGRFCK VA S V SLAGA+VFMSLV+LAVV LQKRPK
Sbjct: 121 YHGNSHVMWNKVCDIFGRFCKHVAVSTVLSLAGAVVFMSLVVLAVVDLQKRPK 165

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BLAST of Lsi05G015060 vs. NCBI nr
Match: XP_038901830.1 (CASP-like protein 1E1 isoform X1 [Benincasa hispida])

HSP 1 Score: 261.2 bits (666), Expect = 6.5e-66
Identity = 146/174 (83.91%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS GGKLEVI RVLGILLS VAAIVVGV KETKV+PITISS LPPF+IVVVAKW+YLSAF
Sbjct: 1   MSCGGKLEVIFRVLGILLSSVAAIVVGVGKETKVVPITISSKLPPFQIVVVAKWYYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNN-MFLLIIVLDTVTVALLSSGAGAAMAIGVM 120
           V+LF  NVITSSYGLLSL+L LSNKN SNN + +LII LDTVTVALLSSG GA MAIGVM
Sbjct: 61  VYLFVTNVITSSYGLLSLLLRLSNKNLSNNKLTVLIIFLDTVTVALLSSGTGAVMAIGVM 120

Query: 121 GYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           GY GNSHVRWNKVC+TFGRFCKQVA SAV SLAGAIVFM LVILAV+GL KRPK
Sbjct: 121 GYNGNSHVRWNKVCDTFGRFCKQVAASAVLSLAGAIVFMLLVILAVLGLLKRPK 174

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BLAST of Lsi05G015060 vs. NCBI nr
Match: XP_004134189.1 (CASP-like protein 1E1 [Cucumis sativus] >KGN57072.1 hypothetical protein Csa_009555 [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 2.5e-65
Identity = 144/174 (82.76%), Postives = 157/174 (90.23%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS  GKLEVILRVLG LLS VAAIV+GVDKETKV+PITISSNLPPF IVVVAKWHY+SAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVMGVDKETKVVPITISSNLPPFPIVVVAKWHYVSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMF-LLIIVLDTVTVALLSSGAGAAMAIGVM 120
           V+L A NVI SSYGLLSLMLTLSNKN+SNN+  LLIIVLDTVTVALLSSG GAA+AIGVM
Sbjct: 61  VYLLATNVIASSYGLLSLMLTLSNKNRSNNVLTLLIIVLDTVTVALLSSGTGAALAIGVM 120

Query: 121 GYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           GY+GNSHV WNKVC+TFGRFCKQVA SA+ SLAGAIVF+ L+ILA+VGL KR K
Sbjct: 121 GYEGNSHVGWNKVCDTFGRFCKQVAASALLSLAGAIVFLLLLILALVGLLKRLK 174

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BLAST of Lsi05G015060 vs. NCBI nr
Match: XP_008438806.1 (PREDICTED: CASP-like protein 1E1 [Cucumis melo] >KAA0049444.1 CASP-like protein 1E1 [Cucumis melo var. makuwa] >TYK16123.1 CASP-like protein 1E1 [Cucumis melo var. makuwa])

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-64
Identity = 142/174 (81.61%), Postives = 155/174 (89.08%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS  GKLEVILRVLG LLS VAAIVVGVDKETKV+P+TISSNLPPF IVVVAKW YLSAF
Sbjct: 1   MSGCGKLEVILRVLGFLLSLVAAIVVGVDKETKVVPVTISSNLPPFPIVVVAKWRYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMF-LLIIVLDTVTVALLSSGAGAAMAIGVM 120
           V+ FA NVI S YGLLSLMLTLSNKN SNN+  LL+IVLDTV+VALLSSGAGAAMAIGV+
Sbjct: 61  VYFFATNVIASLYGLLSLMLTLSNKNGSNNVLTLLVIVLDTVSVALLSSGAGAAMAIGVI 120

Query: 121 GYQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
            Y+GNSHVRWNKVC+ FG+FCKQVA SA+ SLAGAIVF+ LVILA+VGL KRPK
Sbjct: 121 AYEGNSHVRWNKVCDIFGKFCKQVAASALLSLAGAIVFLLLVILALVGLLKRPK 174

[Close]

BLAST of Lsi05G015060 vs. NCBI nr
Match: XP_022945099.1 (CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like protein 1E2 isoform X3 [Cucurbita moschata])

HSP 1 Score: 239.2 bits (609), Expect = 2.7e-59
Identity = 127/173 (73.41%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS GGKLE +LRVLG +L+ VAAIVV +DKETKV+P +IS NLP F++VVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFVLTLVAAIVVRLDKETKVVPYSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMG 120
           V+LFAANVI S YGLL+L ++L+NKN+SN + LLI +LD V V LLSS AGAA+AIG++G
Sbjct: 61  VYLFAANVIASLYGLLTLTISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 121 YQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           Y GNSHVRWNKVC+TFGRFCKQVA ++  SLAGAIVFM LVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Lsi05G015060 vs. NCBI nr
Match: XP_023540313.1 (CASP-like protein 1E2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 238.8 bits (608), Expect = 3.5e-59
Identity = 128/173 (73.99%), Postives = 148/173 (85.55%), Query Frame = 0


Query: 1   MSSGGKLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAF 60
           MS GGKLE +LRVLG  L+ VAAIVV +DKETKV+P +IS NLP F++VVVAKWHYLSAF
Sbjct: 1   MSGGGKLEGVLRVLGFGLTLVAAIVVRLDKETKVVPFSISPNLPTFDVVVVAKWHYLSAF 60

Query: 61  VFLFAANVITSSYGLLSLMLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMG 120
           V+LFAANVI S YGLLSL ++L+NKN+SN + LLI +LD V V LLSS AGAA+AIG++G
Sbjct: 61  VYLFAANVIASLYGLLSLAISLANKNRSNILALLITILDLVMVVLLSSSAGAAIAIGIIG 120

Query: 121 YQGNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKRPK 174
           Y GNSHVRWNKVC+TFGRFCKQVA ++  SLAGAIVFM LVIL VVGLQKRPK
Sbjct: 121 YHGNSHVRWNKVCDTFGRFCKQVAAASALSLAGAIVFMLLVILVVVGLQKRPK 173

[Close]

BLAST of Lsi05G015060 vs. TAIR 10
Match: AT4G15630.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 129.8 bits (325), Expect = 2.1e-30
Identity = 73/163 (44.79%), Postives = 106/163 (65.03%), Query Frame = 0


Query: 7   LEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLFAA 66
           LE+ +RVL ++L+ VAA V+GV K+TKV+PI +   LPP  +   AK  YLSAFV+  +A
Sbjct: 27  LELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISA 86

Query: 67  NVITSSYGLLSLMLTLSNK-NQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQGNS 126
           N I   Y  +S+++ + +K  +S ++ + +++ D + VALL S  GAA AIG+MG  GN 
Sbjct: 87  NAIACGYTAISIVIVMISKGKRSKSLLMAVLIGDLMMVALLFSSTGAAGAIGLMGRHGNK 146

Query: 127 HVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGL 169
           HV W KVC  FG+FC Q A S   +L  ++VFM LV+L  + L
Sbjct: 147 HVMWKKVCGVFGKFCNQAAVSVAITLIASVVFMLLVVLDALKL 189

[Close]

BLAST of Lsi05G015060 vs. TAIR 10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 73/163 (44.79%), Postives = 104/163 (63.80%), Query Frame = 0


Query: 7   LEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLFAA 66
           +E+ +RVL ++L+  AA V+GV K+TKV+ I +   LPP +I   AK  YLSAFV+  + 
Sbjct: 27  VELTMRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISV 86

Query: 67  NVITSSYGLLSL-MLTLSNKNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQGNS 126
           N I   Y  +S+ +L +S   +S  + +++++ D V VALL SG GAA AIG+MG  GN 
Sbjct: 87  NAIACGYTAISIAILMISRGRRSKKLLMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNK 146

Query: 127 HVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGL 169
           HV W KVC  FG+FC + A S   +L  A+VFM LV+L  + L
Sbjct: 147 HVMWKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

[Close]

BLAST of Lsi05G015060 vs. TAIR 10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-15
Identity = 52/162 (32.10%), Postives = 93/162 (57.41%), Query Frame = 0


Query: 6   KLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLFA 65
           KL + LR+   + +  AAIV+ ++KETK + +     + P +  + AK+ +  AFVF   
Sbjct: 17  KLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTV-PIKATLTAKFQHTPAFVFFVI 76

Query: 66  ANVITSSYGLLSLMLTL-SNKNQSNNMFLL-IIVLDTVTVALLSSGAGAAMAIGVMGYQG 125
           ANV+ S + LL +++ + S K +   + LL I +LD +   L+S+ A AA+ +  +G  G
Sbjct: 77  ANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANAAVFVAELGKNG 136

Query: 126 NSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAV 166
           N H +WNKVC+ F  +C   A + + + AG I+ + +  +++
Sbjct: 137 NKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSI 177

[Close]

BLAST of Lsi05G015060 vs. TAIR 10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 76.3 bits (186), Expect = 2.8e-14
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 0


Query: 6   KLEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFEIVVVAKWHYLSAFVFLFA 65
           K+ + LR+L    +  AAIV+G++KETK   +    N  P +    AK+ +  AFVF   
Sbjct: 17  KILLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGN-TPIQATFTAKFDHTPAFVFFVV 76

Query: 66  ANVITSSYGLLSLMLTLSNKNQSNNMF--LLIIVLDTVTVALLSSGAGAAMAIGVMGYQG 125
           AN + S + LL + L +         F  L + +LD + V L+S+ A AA  +  +G  G
Sbjct: 77  ANAMVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNG 136

Query: 126 NSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFM 159
           N H RW+K+C+ F  +C   A + + + AG I+ +
Sbjct: 137 NKHARWDKICDRFATYCDHGAGALIAAFAGVILML 170

[Close]

BLAST of Lsi05G015060 vs. TAIR 10
Match: AT5G15290.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 53/169 (31.36%), Postives = 90/169 (53.25%), Query Frame = 0


Query: 7   LEVILRVLGILLSFVAAIVVGVDKETKVIPITISSNLPPFE--IVVVAKWHYLSAFVFLF 66
           LE ILR++    +  +AI++G   ET          LP F   I   A+++ L A  F  
Sbjct: 28  LEFILRIVAFFNTIGSAILMGTTHET----------LPFFTQFIRFQAEYNDLPALTFFV 87

Query: 67  AANVITSSYGLLSLMLTLSN--KNQSNNMFLLIIVLDTVTVALLSSGAGAAMAIGVMGYQ 126
            AN + S Y +LSL L   +  K ++ N  +L+I+LD   + LL+SGA +A AI  + + 
Sbjct: 88  VANAVVSGYLILSLTLAFVHIVKRKTQNTRILLIILDVAMLGLLTSGASSAAAIVYLAHN 147

Query: 127 GNSHVRWNKVCNTFGRFCKQVATSAVFSLAGAIVFMSLVILAVVGLQKR 172
           GN+   W  +C  F  FC++++ S + S    ++ + L++L+ + L +R
Sbjct: 148 GNNKTNWFAICQQFNSFCERISGSLIGSFIAIVLLILLILLSAIALSRR 186

The following BLAST results are available for this feature:

BLAST of Lsi05G015060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C6TBD0	4.9e-40	49.70	CASP-like protein 1E1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
C6SZP8	1.4e-39	50.90	CASP-like protein 1E2 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9HMP6	2.7e-38	53.61	CASP-like protein 1E1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_820934 PE=3 S...	[more]
B9RT04	2.7e-38	53.33	CASP-like protein 1E1 OS=Ricinus communis OX=3988 GN=RCOM_0680180 PE=2 SV=1	[more]
A7NW78	1.3e-37	49.42	CASP-like protein 1E2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g01820 PE=2 SV=1	[more]

BLAST of Lsi05G015060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Y1	1.2e-65	82.76	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G151500 PE=3 SV=1	[more]
A0A5A7U2H8	7.8e-65	81.61	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00...	[more]
A0A1S3AXE2	7.8e-65	81.61	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483800 PE=3 SV=1	[more]
A0A6J1G003	1.3e-59	73.41	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111449428 PE=3 SV=1	[more]
A0A6J1C8J2	7.1e-58	73.99	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111009367 PE=3 SV=1	[more]

BLAST of Lsi05G015060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901830.1	6.5e-66	83.91	CASP-like protein 1E1 isoform X1 [Benincasa hispida]	[more]
XP_004134189.1	2.5e-65	82.76	CASP-like protein 1E1 [Cucumis sativus] >KGN57072.1 hypothetical protein Csa_009...	[more]
XP_008438806.1	1.6e-64	81.61	PREDICTED: CASP-like protein 1E1 [Cucumis melo] >KAA0049444.1 CASP-like protein ...	[more]
XP_022945099.1	2.7e-59	73.41	CASP-like protein 1E2 isoform X2 [Cucurbita moschata] >XP_022945102.1 CASP-like ...	[more]
XP_023540313.1	3.5e-59	73.99	CASP-like protein 1E2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G015060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15630.1	2.1e-30	44.79	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	1.4e-29	44.79	Uncharacterised protein family (UPF0497)	[more]
AT4G20390.1	2.5e-15	32.10	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	2.8e-14	32.90	Uncharacterised protein family (UPF0497)	[more]
AT5G15290.1	1.1e-13	31.36	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 9..166 e-value: 2.5E-40 score: 135.8
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 4..155 e-value: 2.7E-37 score: 127.8
None	No IPR available	PANTHER	PTHR11615:SF253	CASP-LIKE PROTEIN 1E1	coord: 7..171
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 7..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G015060.1	Lsi05G015060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding