Lsi05G014840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G014840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	WAT1-related protein
Location	chr05: 22632002 .. 22633627 (+)
RNA-Seq Expression	Lsi05G014840
Synteny	Lsi05G014840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGGAAAGAATCTAGAGCTTCCGGCTTCGCTCTTCCTGACGGAGTTTTGCAAGTCCTGCCTTCTGATCCTTTTGAACAGCTCGATTTGGCTCGCAAAATCACTTCCATCGCTCTTTCCACTCGCGTATCGTTGCTTGAATCAGAGTCCTCTGTTCTGCGCTCTAAACTTGCTGAGAAAGATGAGATCGTTGCTGACCTTCGGTTCCAGATCGAATCACTCAACGCCTCGCTCTCCGAGACTGCTGATAAACTCGCCCAGGCAGACGAGGAGAAGGTTGGAATTGGGAGGTGTTTGAATCTTGTTGTGGAAATTCTATACGTTTTAATCGTTGTGTTTTTGGTTTTGGTGTTGTAGGAGAGCTTGGAGAAAGAGAATGCCTCGTTGTTGAACACTGTGAAGAAGCTTAGTAGAGATGTTGCGAAGGTGCATGAAATTGCTTGATTCTATTGTCGTTTTAATGGAATTCATGTCCCGTTCTGTGGATGATGTTTTTATTTTTTGTTTTTGTGAAAATGGACGTGTAACAATCTTTCTCTTTCTAGTTGGAGGTTTTCCGAAAGACCTTAATGCTATCACTTCAGGAGGAGGGAGATAGCTCTGTAAGAAACACATTTCTTATCAGTTTTGAAAGATTTCTCGAGATTGTTTAGTTTAAACATGCCTCATGTTTAGTGGAGATTGATTTATGTGTTTTCTGCTTTTTGCTGTTATTGGATTTGGTAATGCCACAGACAGAAGTTTTAGAAGTTCCAGAAGTTGTTGCTAGGATACAGAGCCAACCAGGTGAATCTACTATTTCACAAATTGAAGGCATTTTTCTTAACCTTCATATATTTATGGTTCCTTTTCTAAGCTTTTCATGCATGGATGAGGAGGAGGATTACCATTTTTTGTTTGTGATTTGATGTAAACTTGTTCATGTAGCCATTGAATCTTGTTGCCACTGTCAATATTCTGGAGAGTTCTTTTTGGGAAATTTTGCATTATACACCTGTGCTTTGAGACAAATGCTTGGCCTGCTTATTGTCTTTAACATGTACAGAAAATTATTTCTTTCAGAAGAAGTTTCATCCTTTCCGCCCTCTAGATATTCATCGGTTCAGAGCCAGGTTTCTGAAGTAGGAAGTTCGTTAGCAGACGATCAAGATTCAGATAGAGATAGTAAGTACAAATTGAATTTACAAGTTAACTACCGAATTTGATTATTGGTGATTCTAGTTCCTTCCATAATCCATTGAGCCGAGTAGAATTGATATCTGTGAACTAATTTGCAAAGATCATAAGAACTTTGTAGAAAGCAAAAGAAGACTGCACTAGTAATTTTATTTCTTTGTTGTAGGTATACGACCTCGTATTCCGCCTGGCCTCCTGTTAGCGTCCCAGACAAGTACACCTCGGCTTACTCCCTATGGCTCTCCTCCTTCACTTTCAGCATCAGGATCCCCAAAGAGAACATCTAGACCTGTGTCACCTGGGCGACATTCAATGTCATTTTCAGCCTCCAGGAACATTTTTGAAGATAGATCTTCAGAATATTCTTCTACGCCCTCAAGCCATTCTGGCTCGATTTCCTCCTACAAAGGTTTGCAGATTGCATTACTTAAAGAAATTTCCTTTTAA

mRNA sequence

ATGCAAGGGAAAGAATCTAGAGCTTCCGGCTTCGCTCTTCCTGACGGAGTTTTGCAAGTCCTGCCTTCTGATCCTTTTGAACAGCTCGATTTGGCTCGCAAAATCACTTCCATCGCTCTTTCCACTCGCGTATCGTTGCTTGAATCAGAGTCCTCTGTTCTGCGCTCTAAACTTGCTGAGAAAGATGAGATCGTTGCTGACCTTCGGTTCCAGATCGAATCACTCAACGCCTCGCTCTCCGAGACTGCTGATAAACTCGCCCAGGCAGACGAGGAGAAGGAGAGCTTGGAGAAAGAGAATGCCTCGTTGTTGAACACTGTGAAGAAGCTTAGTAGAGATGTTGCGAAGTTGGAGGTTTTCCGAAAGACCTTAATGCTATCACTTCAGGAGGAGGGAGATAGCTCTACAGAAGTTTTAGAAGTTCCAGAAGTTGTTGCTAGGATACAGAGCCAACCAGCCATTGAATCTTGTTGCCACTGTCAATATTCTGGAGAGTTCTTTTTGGGAAATTTTGCATTATACACCTGTGCTTTGAGACAAATGCTTGGCCTGCTTATTGTCTTTAACATGTACAGAAAATTATTTCTTTCAGAAGAAGTTTCATCCTTTCCGCCCTCTAGATATTCATCGGTTCAGAGCCAGGTTTCTGAAGTAGGAAGTTCGTTAGCAGACGATCAAGATTCAGATAGAGATAGTATACGACCTCGTATTCCGCCTGGCCTCCTGTTAGCGTCCCAGACAAGTACACCTCGGCTTACTCCCTATGGCTCTCCTCCTTCACTTTCAGCATCAGGATCCCCAAAGAGAACATCTAGACCTGTGTCACCTGGGCGACATTCAATGTCATTTTCAGCCTCCAGGAACATTTTTGAAGATAGATCTTCAGAATATTCTTCTACGCCCTCAAGCCATTCTGGCTCGATTTCCTCCTACAAAGGTTTGCAGATTGCATTACTTAAAGAAATTTCCTTTTAA

Coding sequence (CDS)

ATGCAAGGGAAAGAATCTAGAGCTTCCGGCTTCGCTCTTCCTGACGGAGTTTTGCAAGTCCTGCCTTCTGATCCTTTTGAACAGCTCGATTTGGCTCGCAAAATCACTTCCATCGCTCTTTCCACTCGCGTATCGTTGCTTGAATCAGAGTCCTCTGTTCTGCGCTCTAAACTTGCTGAGAAAGATGAGATCGTTGCTGACCTTCGGTTCCAGATCGAATCACTCAACGCCTCGCTCTCCGAGACTGCTGATAAACTCGCCCAGGCAGACGAGGAGAAGGAGAGCTTGGAGAAAGAGAATGCCTCGTTGTTGAACACTGTGAAGAAGCTTAGTAGAGATGTTGCGAAGTTGGAGGTTTTCCGAAAGACCTTAATGCTATCACTTCAGGAGGAGGGAGATAGCTCTACAGAAGTTTTAGAAGTTCCAGAAGTTGTTGCTAGGATACAGAGCCAACCAGCCATTGAATCTTGTTGCCACTGTCAATATTCTGGAGAGTTCTTTTTGGGAAATTTTGCATTATACACCTGTGCTTTGAGACAAATGCTTGGCCTGCTTATTGTCTTTAACATGTACAGAAAATTATTTCTTTCAGAAGAAGTTTCATCCTTTCCGCCCTCTAGATATTCATCGGTTCAGAGCCAGGTTTCTGAAGTAGGAAGTTCGTTAGCAGACGATCAAGATTCAGATAGAGATAGTATACGACCTCGTATTCCGCCTGGCCTCCTGTTAGCGTCCCAGACAAGTACACCTCGGCTTACTCCCTATGGCTCTCCTCCTTCACTTTCAGCATCAGGATCCCCAAAGAGAACATCTAGACCTGTGTCACCTGGGCGACATTCAATGTCATTTTCAGCCTCCAGGAACATTTTTGAAGATAGATCTTCAGAATATTCTTCTACGCCCTCAAGCCATTCTGGCTCGATTTCCTCCTACAAAGGTTTGCAGATTGCATTACTTAAAGAAATTTCCTTTTAA

Protein sequence

MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAEKDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVFRKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQMLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPGLLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSSTPSSHSGSISSYKGLQIALLKEISF

Homology

[Close]

BLAST of Lsi05G014840 vs. ExPASy Swiss-Prot
Match: Q93W28 (Uncharacterized protein At4g15545 OS=Arabidopsis thaliana OX=3702 GN=At4g15545 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 6.1e-52
Identity = 144/310 (46.45%), Postives = 188/310 (60.65%), Query Frame = 0


Query: 2   QGKESRASG---FALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKL 61
           +G  S  +G   F LPD +LQVLPSDPFEQLD+ARKITSIALSTRVS LESESS LR  L
Sbjct: 10  EGSASAITGSRSFDLPDELLQVLPSDPFEQLDVARKITSIALSTRVSALESESSDLRELL 69

Query: 62  AEKDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLE 121
           AEK++   +L+  +ESL ASLS+   KL+ AD EKE+L +ENASL NTVK+L RDV+KLE
Sbjct: 70  AEKEKEFEELQSHVESLEASLSDAFHKLSLADGEKENLIRENASLSNTVKRLQRDVSKLE 129

Query: 122 VFRKTLMLSLQEEGDS--STEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTC 181
            FRKTLM+SLQ++  +  +T+++  P                                  
Sbjct: 130 GFRKTLMMSLQDDDQNAGTTQIIAKPTP-------------------------------- 189

Query: 182 ALRQMLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPR 241
                               +++ + F PSR+SS+QSQ +      A   D++ D+ +P 
Sbjct: 190 --------------------NDDDTPFQPSRHSSIQSQQASEAIEPA-ATDNENDAPKPS 249

Query: 242 IPPGLLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFED-RSS 301
           +   L L SQT+TPRLTP GSPP LSASG+PK TSRP+SP RHS+SF+ +R +F+D RSS
Sbjct: 250 LSASLPLVSQTTTPRLTPPGSPPILSASGTPKTTSRPISPRRHSVSFATTRGMFDDTRSS 266

Query: 302 EYSSTPSSHS 306
              S P S +
Sbjct: 310 ISISEPGSQT 266

[Close]

BLAST of Lsi05G014840 vs. ExPASy TrEMBL
Match: A0A1S3AXW3 (uncharacterized protein At4g15545-like OS=Cucumis melo OX=3656 GN=LOC103483777 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 5.5e-104
Identity = 237/313 (75.72%), Postives = 246/313 (78.59%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SGF LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGFFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           KDEIVADLRFQI SLNASLSETADKLAQADEEKESLE+ENASL NTVKKLSRDVAKLEVF
Sbjct: 61  KDEIVADLRFQIGSLNASLSETADKLAQADEEKESLERENASLSNTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           R+TLMLSLQEEGD ST   E  EVVARIQSQP+  +                        
Sbjct: 121 RRTLMLSLQEEGDIST---EASEVVARIQSQPSESTI----------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                        L + EE SS PPSRYSSVQSQVSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 -------------LQIEEEFSSLPPSRYSSVQSQVSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQTSTPRLTP+GSP SLSASGSPKRTS+PVSPGRHSMSFS SRNI  DRSS YSS 
Sbjct: 241 LLLASQTSTPRLTPHGSPSSLSASGSPKRTSKPVSPGRHSMSFSTSRNISGDRSSVYSSA 272

Query: 301 PSSHSGSISSYKG 314
           PSSH GSISS  G
Sbjct: 301 PSSHYGSISSSTG 272

[Close]

BLAST of Lsi05G014840 vs. ExPASy TrEMBL
Match: A0A5A7U745 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G006740 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 2.7e-103
Identity = 236/313 (75.40%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SGF LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGFFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           KDEIVADLRFQI SLNASLSETADKLAQADEEKESLE+ENASL NTVKKLSRDVAKLEVF
Sbjct: 61  KDEIVADLRFQIGSLNASLSETADKLAQADEEKESLERENASLSNTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           R+TLMLSLQEEGD  T   E  EVVARIQSQP+                        + Q
Sbjct: 121 RRTLMLSLQEEGDIFT---EASEVVARIQSQPS---------------------ESTILQ 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
           + G+ +  +     ++ EE SS PPSRYSSVQSQVSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 IEGIFLNLS-----YIYEEFSSLPPSRYSSVQSQVSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQTSTPRLTP+GSP SLSASGSPKRTS+PVSPGRHSMSFS SRNI  DRSS YSS 
Sbjct: 241 LLLASQTSTPRLTPHGSPSSLSASGSPKRTSKPVSPGRHSMSFSTSRNISGDRSSVYSSA 282

Query: 301 PSSHSGSISSYKG 314
           PSSH  SISS  G
Sbjct: 301 PSSHYVSISSSTG 282

[Close]

BLAST of Lsi05G014840 vs. ExPASy TrEMBL
Match: A0A0A0L8W6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150810 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.0e-102
Identity = 236/313 (75.40%), Postives = 247/313 (78.91%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SG  LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGSFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           K+EIVADLRFQIESLNASLSET+DKLAQADEEKESLE+ENASL  TVKKLSRDVAKLEVF
Sbjct: 61  KNEIVADLRFQIESLNASLSETSDKLAQADEEKESLERENASLSYTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           RKTLMLSLQEEGDS+T   E PEVVARIQSQP+  +                        
Sbjct: 121 RKTLMLSLQEEGDSAT---ETPEVVARIQSQPSESTFSQ--------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                          + EEVSSFPPSRYSSVQS VSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 ---------------IEEEVSSFPPSRYSSVQS-VSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQ+STPRLTP+GSPPSLSASGSPKRTSR VSPGRHSMS S SRNIF DRSS YSS 
Sbjct: 241 LLLASQSSTPRLTPHGSPPSLSASGSPKRTSRSVSPGRHSMSLSTSRNIFGDRSSVYSSA 271

Query: 301 PSSHSGSISSYKG 314
           PSSH GSISS  G
Sbjct: 301 PSSHYGSISSSTG 271

[Close]

BLAST of Lsi05G014840 vs. ExPASy TrEMBL
Match: A0A5D3CW57 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G00270 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 3.0e-102
Identity = 235/313 (75.08%), Postives = 244/313 (77.96%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SGF LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGFFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           KDEIVADLRFQI SLNASLSETADKLAQADEEKESLE+ENASL NTVKKLSRDVAKLEVF
Sbjct: 61  KDEIVADLRFQIGSLNASLSETADKLAQADEEKESLERENASLSNTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           R+TLMLSLQEEGD  T   E  EVVARIQSQP+  +                        
Sbjct: 121 RRTLMLSLQEEGDIFT---EASEVVARIQSQPSESTI----------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                        L + EE SS PPSRYSSVQSQVSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 -------------LQIEEEFSSLPPSRYSSVQSQVSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQTSTPRLTP+GSP SLSASGSPKRTS+PVSPGRHSMSFS SRNI  DRSS YSS 
Sbjct: 241 LLLASQTSTPRLTPHGSPSSLSASGSPKRTSKPVSPGRHSMSFSTSRNISGDRSSVYSSA 272

Query: 301 PSSHSGSISSYKG 314
           PSSH  SISS  G
Sbjct: 301 PSSHYVSISSSTG 272

[Close]

BLAST of Lsi05G014840 vs. ExPASy TrEMBL
Match: A0A6J1C960 (uncharacterized protein At4g15545-like OS=Momordica charantia OX=3673 GN=LOC111009366 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 3.7e-92
Identity = 215/312 (68.91%), Postives = 233/312 (74.68%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGK    S F LPDGVL+VLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKACGCSSFDLPDGVLKVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           K++I+ADLRFQIESL+ASLSETADKL +ADEE ESLE ENASL NTVKKLSRDVAKLEVF
Sbjct: 61  KEDIIADLRFQIESLDASLSETADKLVRADEENESLEMENASLSNTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           RKTLM SLQEEGDS     EVPEVVA+IQSQ  I +                        
Sbjct: 121 RKTLMESLQEEGDSPA---EVPEVVAKIQSQANISTVSQ--------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                          + EE SS   SRYSS+QSQ SEV +SLA+D+DS  D IRPRI PG
Sbjct: 181 ---------------IEEEDSSLASSRYSSIQSQTSEVENSLAEDRDS--DGIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LL+A QTS+PRLTP+GSPP LSASGSP RTSRPVSP RHSMS S S+NIFEDRSS YSS 
Sbjct: 241 LLVAFQTSSPRLTPHGSPPVLSASGSPNRTSRPVSPRRHSMSSSTSKNIFEDRSSVYSSA 271

Query: 301 PSSHSGSISSYK 313
           PSSH GSISS K
Sbjct: 301 PSSHHGSISSDK 271

[Close]

BLAST of Lsi05G014840 vs. NCBI nr
Match: XP_038880309.1 (uncharacterized protein At4g15545-like [Benincasa hispida] >XP_038880311.1 uncharacterized protein At4g15545-like [Benincasa hispida])

HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-108
Identity = 243/313 (77.64%), Postives = 252/313 (80.51%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES ASGFALPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGASGFALPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           KDEIVADLRFQIESLNASLSE ADKLAQA+E+KESLEKENASL NTV KLSRDVAKLEVF
Sbjct: 61  KDEIVADLRFQIESLNASLSEIADKLAQAEEKKESLEKENASLSNTVMKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           RKTLMLSLQEEGDSST   EVPEVVARIQ+QP+  +                        
Sbjct: 121 RKTLMLSLQEEGDSST---EVPEVVARIQNQPSESTASQ--------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                          + EEVSS PPSRYSSVQSQVSEVGSSLA+D DSDRDSIRPRI PG
Sbjct: 181 ---------------IEEEVSSLPPSRYSSVQSQVSEVGSSLAEDHDSDRDSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQTSTPR TPYGS PSLSAS SP RTSRPVSPGRHSMSFS SRNIFEDRSS YSS 
Sbjct: 241 LLLASQTSTPRFTPYGS-PSLSASVSPMRTSRPVSPGRHSMSFSTSRNIFEDRSSVYSSA 273

Query: 301 PSSHSGSISSYKG 314
           PSSH GSISS +G
Sbjct: 301 PSSHYGSISSNQG 273

[Close]

BLAST of Lsi05G014840 vs. NCBI nr
Match: XP_008438764.1 (PREDICTED: uncharacterized protein At4g15545-like [Cucumis melo])

HSP 1 Score: 387.5 bits (994), Expect = 1.1e-103
Identity = 237/313 (75.72%), Postives = 246/313 (78.59%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SGF LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGFFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           KDEIVADLRFQI SLNASLSETADKLAQADEEKESLE+ENASL NTVKKLSRDVAKLEVF
Sbjct: 61  KDEIVADLRFQIGSLNASLSETADKLAQADEEKESLERENASLSNTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           R+TLMLSLQEEGD ST   E  EVVARIQSQP+  +                        
Sbjct: 121 RRTLMLSLQEEGDIST---EASEVVARIQSQPSESTI----------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                        L + EE SS PPSRYSSVQSQVSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 -------------LQIEEEFSSLPPSRYSSVQSQVSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQTSTPRLTP+GSP SLSASGSPKRTS+PVSPGRHSMSFS SRNI  DRSS YSS 
Sbjct: 241 LLLASQTSTPRLTPHGSPSSLSASGSPKRTSKPVSPGRHSMSFSTSRNISGDRSSVYSSA 272

Query: 301 PSSHSGSISSYKG 314
           PSSH GSISS  G
Sbjct: 301 PSSHYGSISSSTG 272

[Close]

BLAST of Lsi05G014840 vs. NCBI nr
Match: KAA0049425.1 (uncharacterized protein E6C27_scaffold171G006740 [Cucumis melo var. makuwa])

HSP 1 Score: 385.2 bits (988), Expect = 5.6e-103
Identity = 236/313 (75.40%), Postives = 250/313 (79.87%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SGF LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGFFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           KDEIVADLRFQI SLNASLSETADKLAQADEEKESLE+ENASL NTVKKLSRDVAKLEVF
Sbjct: 61  KDEIVADLRFQIGSLNASLSETADKLAQADEEKESLERENASLSNTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           R+TLMLSLQEEGD  T   E  EVVARIQSQP+                        + Q
Sbjct: 121 RRTLMLSLQEEGDIFT---EASEVVARIQSQPS---------------------ESTILQ 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
           + G+ +  +     ++ EE SS PPSRYSSVQSQVSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 IEGIFLNLS-----YIYEEFSSLPPSRYSSVQSQVSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQTSTPRLTP+GSP SLSASGSPKRTS+PVSPGRHSMSFS SRNI  DRSS YSS 
Sbjct: 241 LLLASQTSTPRLTPHGSPSSLSASGSPKRTSKPVSPGRHSMSFSTSRNISGDRSSVYSSA 282

Query: 301 PSSHSGSISSYKG 314
           PSSH  SISS  G
Sbjct: 301 PSSHYVSISSSTG 282

[Close]

BLAST of Lsi05G014840 vs. NCBI nr
Match: XP_011651009.1 (uncharacterized protein At4g15545 [Cucumis sativus] >KGN57052.1 hypothetical protein Csa_009545 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 2.1e-102
Identity = 236/313 (75.40%), Postives = 247/313 (78.91%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SG  LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGSFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           K+EIVADLRFQIESLNASLSET+DKLAQADEEKESLE+ENASL  TVKKLSRDVAKLEVF
Sbjct: 61  KNEIVADLRFQIESLNASLSETSDKLAQADEEKESLERENASLSYTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           RKTLMLSLQEEGDS+T   E PEVVARIQSQP+  +                        
Sbjct: 121 RKTLMLSLQEEGDSAT---ETPEVVARIQSQPSESTFSQ--------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                          + EEVSSFPPSRYSSVQS VSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 ---------------IEEEVSSFPPSRYSSVQS-VSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQ+STPRLTP+GSPPSLSASGSPKRTSR VSPGRHSMS S SRNIF DRSS YSS 
Sbjct: 241 LLLASQSSTPRLTPHGSPPSLSASGSPKRTSRSVSPGRHSMSLSTSRNIFGDRSSVYSSA 271

Query: 301 PSSHSGSISSYKG 314
           PSSH GSISS  G
Sbjct: 301 PSSHYGSISSSTG 271

[Close]

BLAST of Lsi05G014840 vs. NCBI nr
Match: TYK16103.1 (uncharacterized protein E5676_scaffold209G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 381.7 bits (979), Expect = 6.2e-102
Identity = 235/313 (75.08%), Postives = 244/313 (77.96%), Query Frame = 0


Query: 1   MQGKESRASGFALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAE 60
           MQGKES  SGF LPDGVLQVLPSDPFEQLD+ARKITSIALSTRVSLLESESSVLRSKLAE
Sbjct: 1   MQGKESGTSGFFLPDGVLQVLPSDPFEQLDVARKITSIALSTRVSLLESESSVLRSKLAE 60

Query: 61  KDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVF 120
           KDEIVADLRFQI SLNASLSETADKLAQADEEKESLE+ENASL NTVKKLSRDVAKLEVF
Sbjct: 61  KDEIVADLRFQIGSLNASLSETADKLAQADEEKESLERENASLSNTVKKLSRDVAKLEVF 120

Query: 121 RKTLMLSLQEEGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQ 180
           R+TLMLSLQEEGD  T   E  EVVARIQSQP+  +                        
Sbjct: 121 RRTLMLSLQEEGDIFT---EASEVVARIQSQPSESTI----------------------- 180

Query: 181 MLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPG 240
                        L + EE SS PPSRYSSVQSQVSEVGSSLA+D DS  DSIRPRI PG
Sbjct: 181 -------------LQIEEEFSSLPPSRYSSVQSQVSEVGSSLAEDHDS--DSIRPRIAPG 240

Query: 241 LLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSST 300
           LLLASQTSTPRLTP+GSP SLSASGSPKRTS+PVSPGRHSMSFS SRNI  DRSS YSS 
Sbjct: 241 LLLASQTSTPRLTPHGSPSSLSASGSPKRTSKPVSPGRHSMSFSTSRNISGDRSSVYSSA 272

Query: 301 PSSHSGSISSYKG 314
           PSSH  SISS  G
Sbjct: 301 PSSHYVSISSSTG 272

[Close]

BLAST of Lsi05G014840 vs. TAIR 10
Match: AT4G15545.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 206.1 bits (523), Expect = 4.4e-53
Identity = 144/310 (46.45%), Postives = 188/310 (60.65%), Query Frame = 0


Query: 2   QGKESRASG---FALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKL 61
           +G  S  +G   F LPD +LQVLPSDPFEQLD+ARKITSIALSTRVS LESESS LR  L
Sbjct: 10  EGSASAITGSRSFDLPDELLQVLPSDPFEQLDVARKITSIALSTRVSALESESSDLRELL 69

Query: 62  AEKDEIVADLRFQIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLE 121
           AEK++   +L+  +ESL ASLS+   KL+ AD EKE+L +ENASL NTVK+L RDV+KLE
Sbjct: 70  AEKEKEFEELQSHVESLEASLSDAFHKLSLADGEKENLIRENASLSNTVKRLQRDVSKLE 129

Query: 122 VFRKTLMLSLQEEGDS--STEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTC 181
            FRKTLM+SLQ++  +  +T+++  P                                  
Sbjct: 130 GFRKTLMMSLQDDDQNAGTTQIIAKPTP-------------------------------- 189

Query: 182 ALRQMLGLLIVFNMYRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPR 241
                               +++ + F PSR+SS+QSQ +      A   D++ D+ +P 
Sbjct: 190 --------------------NDDDTPFQPSRHSSIQSQQASEAIEPA-ATDNENDAPKPS 249

Query: 242 IPPGLLLASQTSTPRLTPYGSPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFED-RSS 301
           +   L L SQT+TPRLTP GSPP LSASG+PK TSRP+SP RHS+SF+ +R +F+D RSS
Sbjct: 250 LSASLPLVSQTTTPRLTPPGSPPILSASGTPKTTSRPISPRRHSVSFATTRGMFDDTRSS 266

Query: 302 EYSSTPSSHS 306
              S P S +
Sbjct: 310 ISISEPGSQT 266

[Close]

BLAST of Lsi05G014840 vs. TAIR 10
Match: AT1G56080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16520.1); Has 196 Blast hits to 193 proteins in 50 species: Archae - 2; Bacteria - 0; Metazoa - 9; Fungi - 2; Plants - 132; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink). )

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-22
Identity = 62/131 (47.33%), Postives = 83/131 (63.36%), Query Frame = 0


Query: 11  FALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAEKDEIVADLRF 70
           F L D +L V+P+DP++QLDLARKITS+A+++RVS LES+ S LR KL EKD +V +L  
Sbjct: 8   FNLSDEILAVIPTDPYDQLDLARKITSMAIASRVSNLESQVSGLRQKLLEKDRLVHELED 67

Query: 71  QIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVFRKTLMLSLQE 130
           ++ S      E    L    +E   L +E  SL  T KKL RD AKLE F++ LM SL +
Sbjct: 68  RVSSFERLYHEADSSLKNVVDENMKLTQERDSLAITAKKLGRDYAKLEAFKRQLMQSLND 127

Query: 131 EGDSSTEVLEV 142
           +  S TE  +V
Sbjct: 128 DNPSQTETADV 138

[Close]

BLAST of Lsi05G014840 vs. TAIR 10
Match: AT1G16520.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). )

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-20
Identity = 98/296 (33.11%), Postives = 146/296 (49.32%), Query Frame = 0


Query: 11  FALPDGVLQVLPSDPFEQLDLARKITSIALSTRVSLLESESSVLRSKLAEKDEIVADLRF 70
           F LP+ VL V+P DPFEQLDLARKITS+A+++RVS L+SE   LR KL  K+ +V +L  
Sbjct: 8   FELPEEVLSVIPMDPFEQLDLARKITSMAIASRVSNLDSEVVELRQKLLGKESVVRELEE 67

Query: 71  QIESLNASLSETADKLAQADEEKESLEKENASLLNTVKKLSRDVAKLEVFRKTLMLSLQE 130
           +   L     E   +L    E+  +L KE  SL  TV KL+RD+AKLE F++ L+ SL +
Sbjct: 68  KASRLERDCREADSRLKVVLEDNMNLTKEKDSLAMTVTKLTRDLAKLETFKRQLIKSLSD 127

Query: 131 EGDSSTEVLEVPEVVARIQSQPAIESCCHCQYSGEFFLGNFALYTCALRQMLGLLIVFNM 190
           E    TE +++     R   QP         Y G+    +  +   +++Q          
Sbjct: 128 ESGPQTEPVDI-----RTCDQPG-------SYPGK----DGRINAHSIKQAY-------- 187

Query: 191 YRKLFLSEEVSSFPPSRYSSVQSQVSEVGSSLADDQDSDRDSIRPRIPPGLLLASQTSTP 250
                          S  +   + V E  S    ++ S    I PR+ P       T+TP
Sbjct: 188 ---------------SGSTDTNNPVVE-ASKYTGNKFSMTSYISPRLTP-------TATP 247

Query: 251 RLTPYG-SPPSLSASGSPKRTSRPVSPGRHSMSFSASRNIFEDRSSEYSSTPSSHS 306
           ++     SP   SA+GSPKRTS  VSP + ++ + +S+     +SS  +S P + +
Sbjct: 248 KIISTSVSPRGYSAAGSPKRTSGAVSPTKATLWYPSSQ-----QSSAANSPPRNRT 251

The following BLAST results are available for this feature:

BLAST of Lsi05G014840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93W28	6.1e-52	46.45	Uncharacterized protein At4g15545 OS=Arabidopsis thaliana OX=3702 GN=At4g15545 P...	[more]

BLAST of Lsi05G014840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AXW3	5.5e-104	75.72	uncharacterized protein At4g15545-like OS=Cucumis melo OX=3656 GN=LOC103483777 P...	[more]
A0A5A7U745	2.7e-103	75.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0L8W6	1.0e-102	75.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G150810 PE=4 SV=1	[more]
A0A5D3CW57	3.0e-102	75.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1C960	3.7e-92	68.91	uncharacterized protein At4g15545-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Lsi05G014840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880309.1	1.5e-108	77.64	uncharacterized protein At4g15545-like [Benincasa hispida] >XP_038880311.1 uncha...	[more]
XP_008438764.1	1.1e-103	75.72	PREDICTED: uncharacterized protein At4g15545-like [Cucumis melo]	[more]
KAA0049425.1	5.6e-103	75.40	uncharacterized protein E6C27_scaffold171G006740 [Cucumis melo var. makuwa]	[more]
XP_011651009.1	2.1e-102	75.40	uncharacterized protein At4g15545 [Cucumis sativus] >KGN57052.1 hypothetical pro...	[more]
TYK16103.1	6.2e-102	75.08	uncharacterized protein E5676_scaffold209G00270 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi05G014840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15545.1	4.4e-53	46.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G56080.1	1.4e-22	47.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16520.1	1.3e-20	33.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..286
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..286
None	No IPR available	PANTHER	PTHR47383	FAMILY NOT NAMED	coord: 6..157
None	No IPR available	PANTHER	PTHR47383:SF3	BNAC01G41860D PROTEIN	coord: 6..157
None	No IPR available	PANTHER	PTHR47383	FAMILY NOT NAMED	coord: 192..307
None	No IPR available	PANTHER	PTHR47383:SF3	BNAC01G41860D PROTEIN	coord: 192..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G014840.1	Lsi05G014840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane