Lsi05G014460 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCTATGTCAATATTTTTGTATGGATTTCCTGAAATAATTGAACATAGTCTAGTAAAGGAGGTATTTGGCTTAAAGATAAGATTTTGTATATTTCGACCATAGAAAGATTAGTTTCATGTTTGCATAGTGGCTTTATATTCCTTTACTTGTATTGCATCTCTTTCAAATAGTTGTTTTATTAAAAATTATGAGCTAAACATCTCTTCATCGTTGTACATGTTCTATGACACTACAAATGCAAGTGGCCCTGCGAAAGAGATGTCCACCGACTCCTAGATCTAATGGTCTTGAACAACACACAGATGCACGGATGAGTACCTATGACAGTTAGCTTAGCTAGTTCAAGTTGAGAGCCAGGTAGATCTTCTCTCATTTACGACAATACAGATCATTTATTGCTTTTTTGAATACTTGTCAAAGATTCTTGATCAGATCTAAGTCGTAATATGAAACATGCTAATGAGATTTGCTTTGATGAACAGAGAATCCATTAAAGTAATGCTCTGGTGAAACCCAAGTGCGCAGAAGATTTAAGCCAATCTCTGGCTTGGAGATGGTGGTTGGTTATGGGGAAGATTTTTGCCGGCAACCGATCCTCATCTTTTCCCCAACTGGATAACACCATGTAATGATTCTTGTGGGGTCTGTAAACTTTAGACAGATTGGCCAGCTGTGGCCAATGACCCACCATCTCACATGCTCAGCCAATGTGGTTTTAACTCACCCATCACTACCTTTTTCCCTCTTCTAAATTCTATATATCCTCAGAGAGAGAGAAGAAAAGGAAAAAAAGTAATTCTCTCTTTAGTTCTTTTGCCAACAGACACCCACTCAGCAAGCTAACTCTCTCTTCTTGCAGTTTTGAGTTTAGACAAACATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGTACTTCCTTTTTTATCCCAACACGAACATAGCTCAACGATTAAGACGTTATTACATTCTAGGTTGTAAGTTCAAATCTCCACCATCAGGTTGGGATGTAATATTTCAATTTTTCAATCACTTGGGTATTGTCCAATCTTCAAGATCAATAAGTTCTTTAAATCTCTCTGTTGTGTCTATGAATTCAAACAAGATTGATCAATTTGCAGGCTCTGTCTCATGGAGTGCACTATCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGCCGTTGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGTGTATTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAACAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATTCGTCCTAAAAAGGGTTAAGGAAAAGGGTTATCAGAATTCAGATTATAAAAAAAAATAATTCTTTCACCAAGTATTAAGTTAATGGTGATGGCTGTACATTGAAGAAGAAGAAGAAAAAGCTATAGTATTAGGCTGTGTTAATTACTGGGTTGTTAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTGAACCTCCTCTCCCCCTTTTGTGAAAAATTTATGGTTATTCTAATAATATGCCAATTTCATTATCTTTCTCTGTTTTGTTTTCTTTCCCAAATTTTGTTTTATGGGTTGTGAGTTGTAACTTTAGAACAATAGAGCTGTCTTGAAACATGCTCTGTTTTGTTGATCTGAATCTAACAGAATCATTAGACTCTGCAAAAGCTGAAGATGAGTAGAATTCATGTTTTGATTTATTGAGTGTTCAGAGTTTGAAGAATATGCCCTTAACTGGCATCCATGCAATGGCACATGAGGAAGCTTTCATTCTTGAATAGCTGTTTGGATCTATGTTGCAGAGAAAGCTAAAGTTCTCCAAAACATATTCACAGAGAAAAACAGAGGAGAGAGAGAGAGAGAGAGATTTTTGAGGCTTTAACTTTGGATTCTGTAAATTATTAACTCTTTTACATATAAAGTATACCAAAATGATGGGTGTATTATGAGAGTTGGATCAGTCAAATATGTCTTTCAAACTATAGTCACTTTCATTTTTAGAGATAACTATGACAAACTGAACGAGATTTATACCCA TTTTTCTATGTCAATATTTTTGTATGGATTTCCTGAAATAATTGAACATAGTCTAGTAAAGGAGGTATTTGGCTTAAAGATAAGATTTTGTATATTTCGACCATAGAAAGATTAGTTTCATGTTTGCATAGTGGCTTTATATTCCTTTACTTGTATTGCATCTCTTTCAAATAGTTGTTTTATTAAAAATTATGAGCTAAACATCTCTTCATCGTTGTACATGTTCTATGACACTACAAATGCAAGTGGCCCTGCGAAAGAGATGTCCACCGACTCCTAGATCTAATGGTCTTGAACAACACACAGATGCACGGATGAGTACCTATGACAGTTAGCTTAGCTAGTTCAAGTTGAGAGCCAGAGAATCCATTAAAGTAATGCTCTGGTGAAACCCAAGTGCGCAGAAGATTTAAGCCAATCTCTGGCTTGGAGATGGTGGTTGGTTATGGGGAAGATTTTTGCCGGCAACCGATCCTCATCTTTTCCCCAACTGGATAACACCATGTAATGATTCTTGTGGGGTCTGTAAACTTTAGACAGATTGGCCAGCTGTGGCCAATGACCCACCATCTCACATGCTCAGCCAATTTTTGAGTTTAGACAAACATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTATCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGCCGTTGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGTGTATTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAACAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATTCGTCCTAAAAAGGGTTAAGGAAAAGGGTTATCAGAATTCAGATTATAAAAAAAAATAATTCTTTCACCAAGTATTAAGTTAATGGTGATGGCTGTACATTGAAGAAGAAGAAGAAAAAGCTATAGTATTAGGCTGTGTTAATTACTGGGTTGTTAATTGGTTTATGTGGTTCATTGGAAGGTTAATTAACCTAAGGTTTGTGAACCTCCTCTCCCCCTTTTGTGAAAAATTTATGGTTATTCTAATAATATGCCAATTTCATTATCTTTCTCTGTTTTGTTTTCTTTCCCAAATTTTGTTTTATGGGTTGTGAGTTGTAACTTTAGAACAATAGAGCTGTCTTGAAACATGCTCTGTTTTGTTGATCTGAATCTAACAGAATCATTAGACTCTGCAAAAGCTGAAGATGAGTAGAATTCATGTTTTGATTTATTGAGTGTTCAGAGTTTGAAGAATATGCCCTTAACTGGCATCCATGCAATGGCACATGAGGAAGCTTTCATTCTTGAATAGCTGTTTGGATCTATGTTGCAGAGAAAGCTAAAGTTCTCCAAAACATATTCACAGAGAAAAACAGAGGAGAGAGAGAGAGAGAGAGATTTTTGAGGCTTTAACTTTGGATTCTGTAAATTATTAACTCTTTTACATATAAAGTATACCAAAATGATGGGTGTATTATGAGAGTTGGATCAGTCAAATATGTCTTTCAAACTATAGTCACTTTCATTTTTAGAGATAACTATGACAAACTGAACGAGATTTATACCCA ATGGAAGTTGCTTTGGAACTTGAAGATGATTTGTTCTTTGCTGATTTGAGCAGACAGCTTTCTCTTCTTCTCATGGATGACAACGAAGACCCTCTCCCTCATCCACATGTTTCTCTTCAGGCTCTGTCTCATGGAGTGCACTATCCCACACGGCCACTGGCTACGCATGAACATGCCACCGCCGCCGTTGCCGCTGCCTACAGCGGCGTAAGCAAGGGCACCGGTGTATTCATCCCTAGGTCCCTGCAGCCTGCAAGAAAACAGAGGCGTGGAAGACACAACAACATAAAGCCAAACCGACAGTTTCATATCAGTATTGATGTGAACTCACAAGTATCTTCCAACAACCATTCGATTCGTCCTAAAAAGGGTTAA MEVALELEDDLFFADLSRQLSLLLMDDNEDPLPHPHVSLQALSHGVHYPTRPLATHEHATAAVAAAYSGVSKGTGVFIPRSLQPARKQRRGRHNNIKPNRQFHISIDVNSQVSSNNHSIRPKKG Homology
BLAST of Lsi05G014460 vs. ExPASy TrEMBL
Match: A0A5D3D068 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00190 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58 Identity = 119/124 (95.97%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Lsi05G014460 vs. ExPASy TrEMBL
Match: A0A1S3AX25 (uncharacterized protein LOC103483733 OS=Cucumis melo OX=3656 GN=LOC103483733 PE=4 SV=1) HSP 1 Score: 235.7 bits (600), Expect = 1.0e-58 Identity = 119/124 (95.97%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Lsi05G014460 vs. ExPASy TrEMBL
Match: A0A0A0LAE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149910 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.3e-58 Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Lsi05G014460 vs. ExPASy TrEMBL
Match: A0A6J1GWJ8 (uncharacterized protein LOC111457805 OS=Cucurbita moschata OX=3662 GN=LOC111457805 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.0e-50 Identity = 107/124 (86.29%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Lsi05G014460 vs. ExPASy TrEMBL
Match: A0A6J1I9A5 (uncharacterized protein LOC111472261 OS=Cucurbita maxima OX=3661 GN=LOC111472261 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 2.1e-48 Identity = 106/125 (84.80%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of Lsi05G014460 vs. NCBI nr
Match: XP_008438708.1 (PREDICTED: uncharacterized protein LOC103483733 [Cucumis melo] >KAA0049384.1 uncharacterized protein E6C27_scaffold171G006290 [Cucumis melo var. makuwa] >TYK17175.1 uncharacterized protein E5676_scaffold434G00190 [Cucumis melo var. makuwa]) HSP 1 Score: 235.7 bits (600), Expect = 2.1e-58 Identity = 119/124 (95.97%), Postives = 121/124 (97.58%), Query Frame = 0
BLAST of Lsi05G014460 vs. NCBI nr
Match: XP_004134148.1 (uncharacterized protein LOC101209089 [Cucumis sativus] >XP_031738268.1 uncharacterized protein LOC101209089 [Cucumis sativus] >KGN57011.1 hypothetical protein Csa_011226 [Cucumis sativus]) HSP 1 Score: 234.6 bits (597), Expect = 4.7e-58 Identity = 120/125 (96.00%), Postives = 122/125 (97.60%), Query Frame = 0
BLAST of Lsi05G014460 vs. NCBI nr
Match: XP_038897791.1 (uncharacterized protein LOC120085708 [Benincasa hispida]) HSP 1 Score: 230.3 bits (586), Expect = 8.9e-57 Identity = 119/124 (95.97%), Postives = 120/124 (96.77%), Query Frame = 0
BLAST of Lsi05G014460 vs. NCBI nr
Match: KAG6582281.1 (hypothetical protein SDJN03_22283, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 208.0 bits (528), Expect = 4.7e-50 Identity = 107/124 (86.29%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Lsi05G014460 vs. NCBI nr
Match: XP_022955970.1 (uncharacterized protein LOC111457805 [Cucurbita moschata] >XP_023528368.1 uncharacterized protein LOC111791310 [Cucurbita pepo subsp. pepo] >KAG7018685.1 hypothetical protein SDJN02_20556, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 207.6 bits (527), Expect = 6.1e-50 Identity = 107/124 (86.29%), Postives = 112/124 (90.32%), Query Frame = 0
BLAST of Lsi05G014460 vs. TAIR 10
Match: AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-10 Identity = 48/127 (37.80%), Postives = 68/127 (53.54%), Query Frame = 0
BLAST of Lsi05G014460 vs. TAIR 10
Match: AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 2.1e-08 Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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