Lsi05G011220 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GAGGAAGCTAGTTTTCAAAAAATTATATGAACGCCATTTTTCGAATTCACCGGTACCGCATACGGCAAATGTTAATTATGCGGTAAAAGATTCTTAAGAATAACTTTGATGCGTCGTGGGGAAAGGGGGGAACAACCGAAAACGGCAATCGGGAAGCTTCTCTACACCATTTTTTCCGATTTCTGAGGTTGAAGTTTCATCAATCTCAGCCCAGAAGGATTCCATTGAGAGCTCAGCTTTGGAGATCGGCCCCCAATTTATATTCTACACAAACAGATCTAATCTATTAAGATGAATATCTTTAGATTAGCCGGTGATATGACCCATCTTGCAAGCGTTCTCGTCTTGCTCCTCAAGATCCACACCATTAAATCATGTGCTGGTATGGATTTTTTTCCCCTCCTCCATTTCTTTGTTGGGATTTCTTATCTTTTGGAATCTTGCCCTTAAGACAAATAGCTTTTGTATTTGTTGTATGGGTACCCATTATCTAGGATTTGTAGGTTCTGAGAAGATTTGTTCCATTTGATGTATTACATACATGGTTTTGGAGTAGAAATGTGCTAGAATTGCCTAAGAATTGCAAAAGGGAAAATTTTGTTTAATTTGATGATAGTTCCAACATATTTATCAGACAATGAAGGCTTGGAGTAATTAAACAATGTGGATTTCTGTTAACATTTCGTAAGATTTGATAAGGATACCGGAATCTCAATGTTTTAGAGGGTCTTTGTTCTTTATGGGTTTTGTGCAAAGGTCTTTATCATGTTGTTTATTGGTTAGGTTTTGGCTGCAATTTCTTCTATTTTAATATACTTCACTTGATGTAGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACGACCCGCTACTTGGATATCTTTACCGACTTCATATCTCTGTATAATACGGTCATGAAGTTAATATTCTTGGGAAGTTCATATTCAATTGTTTGGTATATTAGACGCCACAAGATTGTTCGTCGGTCATATGACAAGAACCAAGACACTTTCCGCCATCTTTTCCTGATCTTACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTAACATTCAAGGAGGTTAGCTCTTTTTATGATTTTCTCTTAGCTATAAAAATTCACATTGAAATTTGAAACTATTCAAGGAAAAAAGAAAAAAGAAATGTAAGAGATGGCATGTCTATTTTTAAGGTTTTAATTAAGGAATTGTTGCACATCTCTTTCTTATATTGAGGTAAATAAATGGAACAGGTAATGTGGACATTTTCTTTGTACTTGGAAGCTGTTGCCATTCTCCCTCAGCTTGTACTTCTACAACGAACAAAGAATATTGACAATTTGACTGGGCAATATGTATTTCTTCTTGGGTATGATTTCACTACCAATAACATTTAATAATTACCATTGATGTTATAGCACTTGAATCCATGACTCAGTTTCCACCTTTCCTTATATTGCTACTTTCTTATTTTTATCTGTACCTGTTGTTTAGAATCGTACCAACCATAAGTACTAGACAATTAGGAATTCGAATACAATTTTGTGTTGGCTTTCTTTCAATATGTAATTACACGGTGGCTGAATGTAGGCGTCTATGTAATTCTAACACTTATTGTGAGTTTAAATCCATGAAGTAGGAGCAAATGAACCTTTTCTTTTCTTGGTTTAGAACTTAGAACCTTGACTATTTTAGATAGTGTGCCAATGAACATCAAACAATTGGAAAAATAGAAGGTTGTAATGTATGTATTCTGAATGGTTTGAATGGTTTCATGTAAATTAGACCATAAATCAAATTGTTCCTCATATGTGTCTTATAAAAAAAACAAAAAATTGTTCCTCATATGTGATATGTGGTGTATGCTTTAGTGTAAAACTCTTTTCTCTGGATATTTTCCTTCTCTAGTGACTCCCACGGCGTTCCTAATTTCCTACTCATGCTAGAAATAGTAGTGGAGGTACCAGAGCACTGTCTATGAAAAGATAAAAACTGGAATTGCATGTGAGCTTGGAATAGTTTAGAGCAAAGAATCTACACACTCTGTTTCAGTTAGATTTGGCTTCAATATTTATATACTTGCAGTTAGATAAATACCAATAGAATGTAATTCACAAATAAACTAGAAACAGAACCTGGATGGACCAGTGTTTGGAAATGATCTAATTCTCTAATCAAGTTTTTCAGATTATATAGTAGATTGAAGGTATTAGGTCAAATCCAGGACAAACAAAGGAAGTTCATCCCTAAGTTGAGATAGAGTCCTCCCAGAACAAAACTTCTATATTCAAAATTATTCAAGAAGTTTCCAAACACAACCTTAAAGTGGAATAGCATAATGTAATCTCTCGTGGTTCCATTGCCCTTAAAGTGGCTATTTATAGCCTTACAAGGATATAAAACGATGAACTAATTAATTCTAAAATACAAAATAATCTTGATTAACAACTAAGCTACTATTAACTAAATTATAGAAATTATCTAATGATTCTCCTACATCAAGATTTGCCCTGTAAAGATATTTTAAGGACAAGACATTTCTTTTATAAAGGCTTAGGCTGCCATACTCCTACTTGACTTGTAAACTAAACATCCGAATTCATGTAAAAATTAAGTTGTGCACTGTCTAAGTTGATACTGATAGTTTTGAAGGGGGTTGATTGATTATCATTTGAACAAGTCTGTTGGATTTCCATAACGGACAAACCTATTTTCTTTACCTGTGTGATGGGTTTGTTTAGTTTGGGTTATACTGGAGTCAAATGGAGAAGACTACCTTGTGAAAACTGAAAAGCTTCTTCCTCTTTTATGAACATGTAGTAGCTTCTATTAGCCCATCTATTATCCACTTCTTTGACTCAGTTATGTCAACCTCAGAACTTTATGAACAAAATTCCTTATTGCATCCTAACTTTTCTCGATGCAGTGCGTACCGAGCTTTATACATTGTCAACTGGATCTACCGATACTTCACTGAGCCTCACTTTATACACTGGATAAGTAAGTCATCCCTTTCTTCTCCCCTCTGTTCGGTCTTAGTGGCAAGTTGTATGGTGTTTTGTTTTGTGCAAGATTTTGTTAATAAATAGCAACTTCGTCTCATTACATTTCAAGAAAAAGACACAGATGCATCCTAAGCTAATATTGATGCAATCATAGTTCAATTTTTTGGGACAACATTTCCTTGAAACTTTTGGGTGGCATTGTATAATATGACACGAACTCTCTGCTCTCTTGATTACTTTCATTCTGAATTGTTTGATGTTTAGTTTCCCCATTGGAATTCAATACATTTTCCAGGAGATGGTTTTTCTTCTGCATTTTATAATTGAAAAAAAAAAAGATGCAGATGAAAGTCAATTTAAAATTGATGCAATGGGCTGTATAACTATAATCAGCATTCAGTTCACAACCTAATTGGAATTTTATTTATTGGAAACTTCTGTATATAGGCTTCTGATGCAGGAAAATAGTAAAAAAGGAAGCAACTTTTTTGTTATTGTCATCATAGTTTGATTTGGAATTTTATTTTAAAGCTTCTTTTAGTCATGTTACATCTTTTATTTTAAAGTAGCAGAGTAGCATATCTGGAATTAATGAAAAGTAGTGGGGGAGATTCTTCTACCATGTTGGTTTATTTCTCGAAAAATTTGTGTCATATAGCCCTTAGTTCGTGGAGATATAGTATGAAAAGCTTGTTTTGCTCACTTTAGTCGAAAAGGCCGGCACACAATCAATCACCTAGAGGAAAATGTATTGTTACATGTTCTTGGAGAAATTGGCTAACTCCCTAACAAACACACTTTGTGAATTTGCAGCTTGGATTTCTGGGCTCGTGCAGACGCTACTTTACGCGGACTTCTTCTATTATTATTTTCAGAGGTGACGTAGATCTTTTTCTCCAAATACTCCTTGATTTCTTATATATGATCCAAGCGAGTAATTTTTCTTTGAATTATGTTATCTGACATTTACTTTTTGAACATTCAATCTCTGCAGTTGGAAGAACAACCAAAAACTCCAGTTGCCAGCTTAAGAACTCGGAAGAATATATATATATCTAAAGGAGAAGTCACTTCACTTATGACATTCAGTTGTATTTGTTTTTTTAGTTCACAGTTACCACAAAATCCTGATCTTTCTCGAACCCTCCCGAACGCGTATTGTTCGCTCTGTTTAAATGGTTTTTGAGAGTGCAGGTACTTTTATTACTACTAAATCAATAGAGAATACATGCCTGTAAGTTTGTGCTGTAAAGATTCTCAATCTCCATCCTTAGCAATTTTTAAGCAATCTTTAGAAGTTTTGTGATGTCTTTGAGGGGTTTAGATACATTGTAGGTGTGGCTATCTATTTTCATGTTATGATGAGATTACATTGACAATTCATCAGCACAAGCTTGAAACCCCAAAAAGGGTAAACCATTATCTTTTCATAACCCTTATACTAGAGTTTGGGGAAGGGATCTATTTAGTGGTTCAAATACAAAGGATAATTTATGATATTTTTCTTTTTCTTTTTCTCAATGTGAAGGTAAGCTTGTGAGTCCAAACATATGGACAGAGGGAGACGTTCTTCTTGCCCAGTTATTTATTATATATTGAGTGTAACGAGTGGAGCTATGCTCACTTTGATAAATTGTATATTTATATTTTTAGTATGATTTTTTTAATATCTTATGATGGGTTGATTTTTTTTTTTAATTTATAAAATGTTGAATAGGTTAAAGACATAGCACAGAACTAAAAATTCAATAATTTATTAGATAGAAAATTAAAAGTTTACTTATGCAAAAACCTTTTTTAAAGTAATAATAATTCGTTCTTTTAATTTTTTTCAAATTAAAAATTCGAGGATTAAGTGGACATAAGTCTAAAAATTGATTAAACTCGAAGTTTAATCTTTAATTAACCTAAAAGGTTACTAATTAACAATTATATTGTCTTATTACTAACTTGGTATGATTCCATTTAGGATTTTATTAGATTAAAATAGGATACTCATATATGCAACAAAAAATGATTAAATACGGGTAGGAAAAGGAAGAATATTCGTACTAGAAATTAGTAAATCCACTCAAATATCTGGTTCACATATCCTTAACATCCTCATCATCTATCACATCACAATATTTGTTTACAAACTAGGAAGTATTCTAGAAATATAAATTTCTACACTTCTCATCATAATTATTATGGTAAATCAAACAAAAGGAGGACATACTCTAGTTTGTACCTAATTCTCTATCCATTAGTGGTCATTTTAGAGATGTAAAGAACGCCACTAGTACTTTGACTGGTGGACATCTCAAGCACATAAGGCACGCCATTAATACCTTGGCCAGTGGTCATCTTGTGCATGCAAAACACATCACTGCTATCCTAGTTCATCTGGGTAAAGCGTTGGTGGTCATATTTAGCACTCGAAGCTAG GAGGAAGCTAGTTTTCAAAAAATTATATGAACGCCATTTTTCGAATTCACCGGTACCGCATACGGCAAATGTTAATTATGCGGTAAAAGATTCTTAAGAATAACTTTGATGCGTCGTGGGGAAAGGGGGGAACAACCGAAAACGGCAATCGGGAAGCTTCTCTACACCATTTTTTCCGATTTCTGAGGTTGAAGTTTCATCAATCTCAGCCCAGAAGGATTCCATTGAGAGCTCAGCTTTGGAGATCGGCCCCCAATTTATATTCTACACAAACAGATCTAATCTATTAAGATGAATATCTTTAGATTAGCCGGTGATATGACCCATCTTGCAAGCGTTCTCGTCTTGCTCCTCAAGATCCACACCATTAAATCATGTGCTGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACGACCCGCTACTTGGATATCTTTACCGACTTCATATCTCTGTATAATACGGTCATGAAGTTAATATTCTTGGGAAGTTCATATTCAATTGTTTGGTATATTAGACGCCACAAGATTGTTCGTCGGTCATATGACAAGAACCAAGACACTTTCCGCCATCTTTTCCTGATCTTACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTAACATTCAAGGAGGTAATGTGGACATTTTCTTTGTACTTGGAAGCTGTTGCCATTCTCCCTCAGCTTGTACTTCTACAACGAACAAAGAATATTGACAATTTGACTGGGCAATATGTATTTCTTCTTGGTGCGTACCGAGCTTTATACATTGTCAACTGGATCTACCGATACTTCACTGAGCCTCACTTTATACACTGGATAACTTGGATTTCTGGGCTCGTGCAGACGCTACTTTACGCGGACTTCTTCTATTATTATTTTCAGAGAGATGTAAAGAACGCCACTAGTACTTTGACTGGTGGACATCTCAAGCACATAAGGCACGCCATTAATACCTTGGCCAGTGGTCATCTTGTGCATGCAAAACACATCACTGCTATCCTAGTTCATCTGGGTAAAGCGTTGGTGGTCATATTTAGCACTCGAAGCTAG ATGAATATCTTTAGATTAGCCGGTGATATGACCCATCTTGCAAGCGTTCTCGTCTTGCTCCTCAAGATCCACACCATTAAATCATGTGCTGGTGTTTCTTTGAAGACTCAAGAGCTATATGCAATTGTTTTTACGACCCGCTACTTGGATATCTTTACCGACTTCATATCTCTGTATAATACGGTCATGAAGTTAATATTCTTGGGAAGTTCATATTCAATTGTTTGGTATATTAGACGCCACAAGATTGTTCGTCGGTCATATGACAAGAACCAAGACACTTTCCGCCATCTTTTCCTGATCTTACCTTGTTTTGTCTTGGCCCTACTTATCAATGAAAAATTAACATTCAAGGAGGTAATGTGGACATTTTCTTTGTACTTGGAAGCTGTTGCCATTCTCCCTCAGCTTGTACTTCTACAACGAACAAAGAATATTGACAATTTGACTGGGCAATATGTATTTCTTCTTGGTGCGTACCGAGCTTTATACATTGTCAACTGGATCTACCGATACTTCACTGAGCCTCACTTTATACACTGGATAACTTGGATTTCTGGGCTCGTGCAGACGCTACTTTACGCGGACTTCTTCTATTATTATTTTCAGAGAGATGTAAAGAACGCCACTAGTACTTTGACTGGTGGACATCTCAAGCACATAAGGCACGCCATTAATACCTTGGCCAGTGGTCATCTTGTGCATGCAAAACACATCACTGCTATCCTAGTTCATCTGGGTAAAGCGTTGGTGGTCATATTTAGCACTCGAAGCTAG MNIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFTTRYLDIFTDFISLYNTVMKLIFLGSSYSIVWYIRRHKIVRRSYDKNQDTFRHLFLILPCFVLALLINEKLTFKEVMWTFSLYLEAVAILPQLVLLQRTKNIDNLTGQYVFLLGAYRALYIVNWIYRYFTEPHFIHWITWISGLVQTLLYADFFYYYFQRDVKNATSTLTGGHLKHIRHAINTLASGHLVHAKHITAILVHLGKALVVIFSTRS Homology
BLAST of Lsi05G011220 vs. ExPASy Swiss-Prot
Match: Q9ZTN2 (ER lumen protein-retaining receptor OS=Petunia hybrida OX=4102 GN=ERD2 PE=2 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 3.9e-102 Identity = 180/203 (88.67%), Postives = 196/203 (96.55%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy Swiss-Prot
Match: Q8VWI1 (ER lumen protein-retaining receptor B OS=Arabidopsis thaliana OX=3702 GN=ERD2B PE=1 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 3.2e-96 Identity = 172/202 (85.15%), Postives = 188/202 (93.07%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy Swiss-Prot
Match: P35402 (ER lumen protein-retaining receptor A OS=Arabidopsis thaliana OX=3702 GN=ERD2A PE=2 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.6e-82 Identity = 146/202 (72.28%), Postives = 175/202 (86.63%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy Swiss-Prot
Match: Q5XHA2 (ER lumen protein-retaining receptor 1 OS=Xenopus tropicalis OX=8364 GN=kdelr1 PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.2e-55 Identity = 113/213 (53.05%), Postives = 155/213 (72.77%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy Swiss-Prot
Match: Q611C8 (ER lumen protein-retaining receptor OS=Caenorhabditis briggsae OX=6238 GN=erd-2 PE=3 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 8.0e-55 Identity = 111/208 (53.37%), Postives = 151/208 (72.60%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy TrEMBL
Match: A0A0A0L8S9 (ER lumen protein-retaining receptor OS=Cucumis sativus OX=3659 GN=Csa_3G629230 PE=3 SV=1) HSP 1 Score: 399.8 bits (1026), Expect = 8.5e-108 Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy TrEMBL
Match: A0A1S3CMY2 (ER lumen protein-retaining receptor OS=Cucumis melo OX=3656 GN=LOC103502779 PE=3 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 4.2e-107 Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy TrEMBL
Match: A0A6J1DZK0 (ER lumen protein-retaining receptor OS=Momordica charantia OX=3673 GN=LOC111026065 PE=3 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106 Identity = 197/203 (97.04%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy TrEMBL
Match: A0A6J1ETS0 (ER lumen protein-retaining receptor OS=Cucurbita moschata OX=3662 GN=LOC111437475 PE=3 SV=1) HSP 1 Score: 395.6 bits (1015), Expect = 1.6e-106 Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Lsi05G011220 vs. ExPASy TrEMBL
Match: A0A6J1K9I6 (ER lumen protein-retaining receptor OS=Cucurbita maxima OX=3661 GN=LOC111491327 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.8e-105 Identity = 197/203 (97.04%), Postives = 201/203 (99.01%), Query Frame = 0
BLAST of Lsi05G011220 vs. NCBI nr
Match: XP_004144385.1 (ER lumen protein-retaining receptor [Cucumis sativus] >KGN58365.1 hypothetical protein Csa_002130 [Cucumis sativus]) HSP 1 Score: 399.8 bits (1026), Expect = 1.8e-107 Identity = 202/203 (99.51%), Postives = 203/203 (100.00%), Query Frame = 0
BLAST of Lsi05G011220 vs. NCBI nr
Match: XP_008465077.1 (PREDICTED: ER lumen protein-retaining receptor [Cucumis melo]) HSP 1 Score: 397.5 bits (1020), Expect = 8.7e-107 Identity = 200/203 (98.52%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Lsi05G011220 vs. NCBI nr
Match: XP_022159725.1 (ER lumen protein-retaining receptor [Momordica charantia]) HSP 1 Score: 396.0 bits (1016), Expect = 2.5e-106 Identity = 197/203 (97.04%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Lsi05G011220 vs. NCBI nr
Match: XP_038886982.1 (ER lumen protein-retaining receptor [Benincasa hispida]) HSP 1 Score: 395.6 bits (1015), Expect = 3.3e-106 Identity = 199/203 (98.03%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Lsi05G011220 vs. NCBI nr
Match: XP_022931239.1 (ER lumen protein-retaining receptor [Cucurbita moschata]) HSP 1 Score: 395.6 bits (1015), Expect = 3.3e-106 Identity = 198/203 (97.54%), Postives = 202/203 (99.51%), Query Frame = 0
BLAST of Lsi05G011220 vs. TAIR 10
Match: AT3G25040.1 (endoplasmic reticulum retention defective 2B ) HSP 1 Score: 352.8 bits (904), Expect = 2.3e-97 Identity = 172/202 (85.15%), Postives = 188/202 (93.07%), Query Frame = 0
BLAST of Lsi05G011220 vs. TAIR 10
Match: AT1G29330.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 307.4 bits (786), Expect = 1.1e-83 Identity = 146/202 (72.28%), Postives = 175/202 (86.63%), Query Frame = 0
BLAST of Lsi05G011220 vs. TAIR 10
Match: AT3G25160.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 106.7 bits (265), Expect = 2.9e-23 Identity = 71/215 (33.02%), Postives = 122/215 (56.74%), Query Frame = 0
BLAST of Lsi05G011220 vs. TAIR 10
Match: AT2G21190.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 103.6 bits (257), Expect = 2.4e-22 Identity = 72/215 (33.49%), Postives = 120/215 (55.81%), Query Frame = 0
BLAST of Lsi05G011220 vs. TAIR 10
Match: AT1G19970.1 (ER lumen protein retaining receptor family protein ) HSP 1 Score: 102.8 bits (255), Expect = 4.1e-22 Identity = 80/229 (34.93%), Postives = 118/229 (51.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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