Lsi05G010790 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G010790
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	S-protein homolog
Location	chr05: 18378114 .. 18380002 (-)
RNA-Seq Expression	Lsi05G010790
Synteny	Lsi05G010790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGTGACGATTTTGAACCAACAAACAAATGATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGGTCAACGATCTTACAAAATGTTACTATTTTATTATTAAAGTTTTGCATTTTTTGGTTTAATCAAATCTCATTTTGGTTTTTAGTTTTTTTTAGTTTTGAAAAATTAAGCCTTATGGATACTAGGTTAATTCACTTATTGATTTATGTATTTTGTTGTCTACATTTTAGGAGTGTTTTCAAAATCCAAACTAAATTCTAAAAAGTTAATTAGGCTTTGTTTGATAACCATTTAAAGGTCTCGTTGAGTAACTATTTGGTTTTTAGTTTTCTGTTTTTTTTTTAAATTAAGTCTATAAACACTACTTCCATTTATCGTTTTATATGTTATGTTCGTTAGTTACATTTTAAGGGTGTTTTCAAAATCAAAGTCAAAATTTGAAAAGTAAAAAAATATATATAGTTTTCAAAAATTTTTTTTTTTAAAAAAATTGGCTAAGAATTCTTTATTCTAATGTCTAGGCCGTAGAAAATATGAAAATCACGAGTAAAAAATGGTAAGAAAACAAGCACAACTATCAAAAACTAAAAATAAAAATCAAATGGTTAACAAACATGGTCTTAGTTTTTGGTTTTTGAAAATTGTTATTATTGTTGTCTCATAATTTCTCAATATGTTTTCATCTTTCCTAAGTAAACATTTGAATTTTTAATCGAATTTTTAAAAAAAAAATATCATATTTTTAAAAACTATTTTTTTAGTTTTCCAAATTTTTCTTGGATTCTAACAACACTTCTAATCTGTATACAACAAAATATAGAAACTAATCAATAGTAGTGTTGGTAAGCTTTATTTTATAAAACCAAATAGTTATAAATGAGGCCTGAAAAAGTAGTTTATAAAAAATTGGTTTCGTTTTAGGAATCTGGCTAACAGATTAAGAAATTTTTAAAGACCATGTACAATTGTCAAAAATAAAAACCAAGTCATATCAAATGGTCTAAAATGTTGATTTCAGTTCCTGAACTTTCAAATTAGTTTTATTTGGTCTAAAAAAATTTTAAAATGTCTCTATAACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGGGTCGTTGATGTATTGTTTTTTCTTTTATTATCTACTTATCCAATTCTCACAAACCCACGTGGCTTCAAATTTTACTCATACTAATATATTAGTACACATACTGACAACTTGGTCATTAATTTTTTAAAAACAAAATAAATGTTTGACAACAAACAAAAATATTTATTTATAAGAATAGTAAATTAAACGAATTTTAAATATTTAGGAACTAGAATAGAATGACGTGGAAGTTCAATGGTAAAAATGATTTTTTTTATATTAGATTGATTAAAAAAATTAAAATAAACTGTCAAAGTGAGTTTAGCTAAATGATAATGACATGGGTCTTTCTCCCTAGAGGTCAGAGGTTTAATCCTCTATCCTCGCAGTTGTTGTACTTAAAAAAAATAAAACAAAATAAAATAAACTTGAAAGTTCACAGAAAAAATGTTATTTAATCTTTGTTTTAATTGAGTTTGAATACAATGTGTAACATAAAGTTCTGGATCCACTACTGATTTTAGGTGAGCAAGTCGTCACCAATGCAAGGAGCTACCAGTGGAGCTTTAAGGAGAATTTTTCTGGAACAACGTTGTTTTGGTGCAACTTTCGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGAACATCATGGCTTGAAAATCATTGCACCAGTTCAAACTGTATTTGGGCAGCTAGAAATGATGGCTTTTACTTGTTTAATGGCATGCAAAACGAATTTGACTTCATTCATGCATGGGCATAA

mRNA sequence

ATGACCGTGACGATTTTGAACCAACAAACAAATGATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGGTGAGCAAGTCGTCACCAATGCAAGGAGCTACCAGTGGAGCTTTAAGGAGAATTTTTCTGGAACAACGTTGTTTTGGTGCAACTTTCGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGAACATCATGGCTTGAAAATCATTGCACCAGTTCAAACTGTATTTGGGCAGCTAGAAATGATGGCTTTTACTTGTTTAATGGCATGCAAAACGAATTTGACTTCATTCATGCATGGGCATAA

Coding sequence (CDS)

ATGACCGTGACGATTTTGAACCAACAAACAAATGATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGGTGAGCAAGTCGTCACCAATGCAAGGAGCTACCAGTGGAGCTTTAAGGAGAATTTTTCTGGAACAACGTTGTTTTGGTGCAACTTTCGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGAACATCATGGCTTGAAAATCATTGCACCAGTTCAAACTGTATTTGGGCAGCTAGAAATGATGGCTTTTACTTGTTTAATGGCATGCAAAACGAATTTGACTTCATTCATGCATGGGCATAA

Protein sequence

MTVTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAWA

Homology

[Close]

BLAST of Lsi05G010790 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.6e-15
Identity = 41/108 (37.96%), Postives = 55/108 (50.93%), Query Frame = 0


Query: 3   VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHA 62
           VT++N   T + LF HCKSK+DDLGE  +     + W+F EN   +T FWC       H 
Sbjct: 43  VTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHM 102

Query: 63  SFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           +  V+W +     L + C   NCIW A+ DG YL+N    E      W
Sbjct: 103 NVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Lsi05G010790 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 5.9e-15
Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 3   VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHA 62
           VT+ N   T + LF HCKSK++DLG+  +     + W+F EN   +TLFWC       H 
Sbjct: 43  VTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDGHM 102

Query: 63  SFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           + +V+W +     L + C   NC+W A+NDG YL+N    E      W
Sbjct: 103 NVKVFWDD---VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Lsi05G010790 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.7e-15
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 2   TVTILNQQTND-PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKH 61
           TV I N   N   L  HCKSKDDDLG + +    S+ +SF   F G TL++C+F    + 
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 62  ASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
            SF++Y  + R S  +N C S  C+W  R +G   FN    +FD  + W
Sbjct: 109 HSFDIY-KDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Lsi05G010790 vs. ExPASy Swiss-Prot
Match: Q9FMQ4 (S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-09
Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 17  HCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLE 76
           HCKS DDDLG +++    S+ + F+ +  GTTLF+C+F    +   F++Y  +R    + 
Sbjct: 54  HCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDR--DGVR 113

Query: 77  NHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           +H +  NCIW     G  +F+   + F+  + W
Sbjct: 114 SHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]

BLAST of Lsi05G010790 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09
Identity = 33/110 (30.00%), Postives = 51/110 (46.36%), Query Frame = 0


Query: 1   MTVTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQ-K 60
           +T  ++    +  L  HCKS+DDD G  ++     Y W F  NF  +TL++C F   Q K
Sbjct: 31  LTRVVIYNDNDYLLGVHCKSRDDDHGFHILQKGGLYGWMFYVNFMNSTLYFCGFSQEQVK 90

Query: 61  HASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
              F++Y   R +S         NC W A+ DG Y +  +  +    + W
Sbjct: 91  KGVFDIYKAVRDSS------RCRNCTWEAKEDGIYGYGEIPKKNPLFYKW 134

[Close]

BLAST of Lsi05G010790 vs. ExPASy TrEMBL
Match: A0A1S3C8Z6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.8e-27
Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHA 62
           VTI+N Q N  L  HCKSKDDDLG  V+ N    Y W FKEN+  TT FWCNF++   HA
Sbjct: 40  VTIINYQINASLEVHCKSKDDDLGVHVIQNEGERYSWGFKENWLQTTKFWCNFQSRLGHA 99

Query: 63  SFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           SFEV+WPE  T WL + C++SNC+W A NDGF L NG     +F H W
Sbjct: 100 SFEVFWPETGT-WLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]

BLAST of Lsi05G010790 vs. ExPASy TrEMBL
Match: A0A6J1CQI8 (S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.0e-25
Identity = 55/110 (50.00%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHAS 62
           V ++N   N+ L  HCKSKDDDLG Q +     +QWSFK NF GTTLFWCN      + +
Sbjct: 42  VHVVNNLNNNFLDVHCKSKDDDLGYQRLVRGADFQWSFKVNFWGTTLFWCNLHKPGAYVT 101

Query: 63  FEVYWPERRTSWLENHC---TSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           FEV+WPE R +WL N C   T  +CIW A++DG YL N   N  + IH W
Sbjct: 102 FEVFWPESRNAWLRNRCHNGTEGHCIWTAKDDGIYLRNIPTNSEELIHKW 151

[Close]

BLAST of Lsi05G010790 vs. ExPASy TrEMBL
Match: A0A0A0KA40 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.1e-24
Identity = 57/110 (51.82%), Postives = 71/110 (64.55%), Query Frame = 0


Query: 2   TVTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKH 61
           TVTI+N Q N  L  HCKSKDDDLG  V+ N    Y W FKEN+  TT +WC+F++   H
Sbjct: 39  TVTIINYQINASLQVHCKSKDDDLGVHVIQNEGEHYSWGFKENWLQTTKYWCDFQSKLGH 98

Query: 62  ASFEVYWPERRTSWLENHC-TSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           ASFEV+WPER T W  + C ++SNC+W A +DGF L N      +F H W
Sbjct: 99  ASFEVFWPERGT-WFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQHPW 147

[Close]

BLAST of Lsi05G010790 vs. ExPASy TrEMBL
Match: A0A6P4ABD6 (S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 14  LFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTS 73
           LF HC+SKDDDLGE  +T    + W+F+ NF GTT FWC  R   +HA+F+V+WPE+R  
Sbjct: 54  LFIHCQSKDDDLGEHNLTTGSHFTWTFRTNFWGTTRFWCYARRDNEHAAFDVFWPEKRHK 113

Query: 74  WLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           WLE  C    CIW A++DGFYL N   N+ + IH W
Sbjct: 114 WLETRCDYKVCIWTAKDDGFYLRNVPINQDELIHKW 149

[Close]

BLAST of Lsi05G010790 vs. ExPASy TrEMBL
Match: A0A6J1ESA0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.6e-23
Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHAS 62
           V I+N Q+   L  HCKS DDDLG  ++  A  Y W FK N  G+T FWC F +   H S
Sbjct: 27  VVIINDQSKAQLNVHCKSGDDDLGAHIIKVADDYDWKFKVNLWGSTRFWCTFDSQNGHLS 86

Query: 63  FEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           F+V+WPE  ++WL   C   +CIW A+++G YL N  +N F+ IH W
Sbjct: 87  FDVFWPEGDSTWLLERCGYGSCIWVAKDEGIYLKNDPRNTFELIHKW 133

[Close]

BLAST of Lsi05G010790 vs. NCBI nr
Match: XP_008458671.1 (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 3.8e-27
Identity = 60/108 (55.56%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHA 62
           VTI+N Q N  L  HCKSKDDDLG  V+ N    Y W FKEN+  TT FWCNF++   HA
Sbjct: 40  VTIINYQINASLEVHCKSKDDDLGVHVIQNEGERYSWGFKENWLQTTKFWCNFQSRLGHA 99

Query: 63  SFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           SFEV+WPE  T WL + C++SNC+W A NDGF L NG     +F H W
Sbjct: 100 SFEVFWPETGT-WLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHPW 146

[Close]

BLAST of Lsi05G010790 vs. NCBI nr
Match: KAE8652336.1 (hypothetical protein Csa_021865 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-26
Identity = 59/107 (55.14%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHAS 62
           V+I N Q +  L THCKSKDDDLG +V+     Y WSFKEN   TTLFWC+F +   HAS
Sbjct: 24  VSIHNFQKDATLLTHCKSKDDDLGAKVLDVKGQYSWSFKENIWQTTLFWCDFSSLNGHAS 83

Query: 63  FEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           FEV+WPE +  WLE  C   NC WAA NDGF+L N  + +F+F+H W
Sbjct: 84  FEVFWPE-KGEWLEYRCDYGNCTWAATNDGFFLANIPERKFEFMHYW 129

[Close]

BLAST of Lsi05G010790 vs. NCBI nr
Match: KAE8651384.1 (hypothetical protein Csa_001671 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.2e-26
Identity = 57/107 (53.27%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHAS 62
           V ILN+ T D LF  CKSKDDDLG Q +   + + WSFKEN   TTL+WC   N + HAS
Sbjct: 110 VNILNEMTKDSLFIRCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMHNAKSHAS 169

Query: 63  FEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           F VYWPE R+ WL   C   NCIW+AR+DG YL     N ++ IH W
Sbjct: 170 FNVYWPE-RSGWLAFRCQLRNCIWSARDDGIYLKTNTHNTYELIHTW 215

[Close]

BLAST of Lsi05G010790 vs. NCBI nr
Match: XP_004136435.1 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 3.2e-26
Identity = 57/107 (53.27%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHAS 62
           V ILN+ T D LF  CKSKDDDLG Q +   + + WSFKEN   TTL+WC   N + HAS
Sbjct: 35  VNILNEMTKDSLFIRCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMHNAKSHAS 94

Query: 63  FEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           F VYWPE R+ WL   C   NCIW+AR+DG YL     N ++ IH W
Sbjct: 95  FNVYWPE-RSGWLAFRCQLRNCIWSARDDGIYLKTNTHNTYELIHTW 140

[Close]

BLAST of Lsi05G010790 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 55/107 (51.40%), Postives = 68/107 (63.55%), Query Frame = 0


Query: 3   VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHAS 62
           + ILN+ T D LF  CKSKDDDLG Q +   + + WSFKEN   TTL+WC   N + HAS
Sbjct: 35  INILNEMTKDTLFLQCKSKDDDLGAQNLGVKQQFSWSFKENLWQTTLYWCYMHNAESHAS 94

Query: 63  FEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           F V+WPE ++ WL   C   NCIW+AR+DG YL     N F+ IH W
Sbjct: 95  FNVFWPE-KSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTFELIHTW 140

[Close]

BLAST of Lsi05G010790 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 )

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 41/108 (37.96%), Postives = 55/108 (50.93%), Query Frame = 0


Query: 3   VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHA 62
           VT++N   T + LF HCKSK+DDLGE  +     + W+F EN   +T FWC       H 
Sbjct: 43  VTVVNGLTTGETLFIHCKSKEDDLGEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHM 102

Query: 63  SFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           +  V+W +     L + C   NCIW A+ DG YL+N    E      W
Sbjct: 103 NVNVFWDD---VILFHRCGWKNCIWTAKTDGLYLWNSASGEDVLSRKW 147

[Close]

BLAST of Lsi05G010790 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.6 bits (200), Expect = 4.2e-16
Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 0


Query: 3   VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHA 62
           VT+ N   T + LF HCKSK++DLG+  +     + W+F EN   +TLFWC       H 
Sbjct: 43  VTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFGENMLHSTLFWCYMSKDDGHM 102

Query: 63  SFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           + +V+W +     L + C   NC+W A+NDG YL+N    E      W
Sbjct: 103 NVKVFWDD---VILFHRCDWKNCVWTAKNDGLYLWNSAIGEDVLSEKW 147

[Close]

BLAST of Lsi05G010790 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 81.3 bits (199), Expect = 5.5e-16
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 0


Query: 2   TVTILNQQTND-PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKH 61
           TV I N   N   L  HCKSKDDDLG + +    S+ +SF   F G TL++C+F    + 
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNES 108

Query: 62  ASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
            SF++Y  + R S  +N C S  C+W  R +G   FN    +FD  + W
Sbjct: 109 HSFDIY-KDHRDSGGDNKCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156

[Close]

BLAST of Lsi05G010790 vs. TAIR 10
Match: AT5G12060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-11
Identity = 30/93 (32.26%), Postives = 51/93 (54.84%), Query Frame = 0


Query: 17  HCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLE 76
           HCKS DDDLG +++    S+ + F+ +  GTTLF+C+F    +   F++Y  +R    + 
Sbjct: 54  HCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSKRFDIYDDDR--DGVR 113

Query: 77  NHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW 110
           +H +  NCIW     G  +F+   + F+  + W
Sbjct: 114 SHISCINCIWDISIQGPCMFSESDHAFNICYDW 144

[Close]

BLAST of Lsi05G010790 vs. TAIR 10
Match: AT3G17080.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 62.4 bits (150), Expect = 2.6e-10
Identity = 36/100 (36.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 13  PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRT 72
           PL  HCKS++DDLG Q +   RS+ + F  +  G TLF+C F    +   F++Y   R  
Sbjct: 39  PLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRFSWGAESHIFDIYKQSRDK 98

Query: 73  SWLENHCTSSNCIWAARNDG---FYLFNGMQNEFDFIHAW 110
            + E  C    C W  R +G   FY   GM   FD  ++W
Sbjct: 99  EFQEFGC--KKCEWKIRKNGPCKFYKKTGM---FDHCYSW 133

The following BLAST results are available for this feature:

BLAST of Lsi05G010790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JLS0	1.6e-15	37.96	S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1	[more]
Q2HQ46	5.9e-15	37.04	S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1	[more]
F4JLQ5	7.7e-15	38.53	S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1	[more]
Q9FMQ4	1.3e-09	32.26	S-protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=SPH3 PE=2 SV=1	[more]
F2Q9V4	2.2e-09	30.00	S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2	[more]

BLAST of Lsi05G010790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8Z6	1.8e-27	55.56	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1	[more]
A0A6J1CQI8	5.0e-25	50.00	S-protein homolog OS=Momordica charantia OX=3673 GN=LOC111013653 PE=3 SV=1	[more]
A0A0A0KA40	1.1e-24	51.82	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=3 SV=1	[more]
A0A6P4ABD6	1.9e-24	52.08	S-protein homolog OS=Ziziphus jujuba OX=326968 GN=LOC107426492 PE=3 SV=1	[more]
A0A6J1ESA0	3.6e-23	45.79	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1	[more]

BLAST of Lsi05G010790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458671.1	3.8e-27	55.56	PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]	[more]
KAE8652336.1	1.9e-26	55.14	hypothetical protein Csa_021865 [Cucumis sativus]	[more]
KAE8651384.1	3.2e-26	53.27	hypothetical protein Csa_001671 [Cucumis sativus]	[more]
XP_004136435.1	3.2e-26	53.27	S-protein homolog 1-like [Cucumis sativus]	[more]
XP_004136434.3	1.2e-25	51.40	S-protein homolog 1-like [Cucumis sativus]	[more]

BLAST of Lsi05G010790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16295.1	1.1e-16	37.96	S-protein homologue 1	[more]
AT4G29035.1	4.2e-16	37.04	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	5.5e-16	38.53	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	9.1e-11	32.26	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	2.6e-10	36.00	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 3..109 e-value: 6.7E-26 score: 90.9
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 2..101
None	No IPR available	PANTHER	PTHR31232:SF34	PUTATIVE-RELATED	coord: 2..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G010790.1	Lsi05G010790.1	mRNA