Lsi05G010240 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAACCACAGCCTCCAACCGGCATTCACCGATACGTATTAGCCATTTTCAAACAGAACGCCGCCCTCGCCGGCAGGCTCCGACCACCCAACACCCGCAGCAATTTCAGCACCCGACAATTCGCCTCTCAGAATGCCCTCGGCCTTCCCGTCGCCGCCGTCTACTTCAATTCCCAGAAGCAACCTGCAGCCAAGAAACGCTGA ATGGAACCACAGCCTCCAACCGGCATTCACCGATACGTATTAGCCATTTTCAAACAGAACGCCGCCCTCGCCGGCAGGCTCCGACCACCCAACACCCGCAGCAATTTCAGCACCCGACAATTCGCCTCTCAGAATGCCCTCGGCCTTCCCGTCGCCGCCGTCTACTTCAATTCCCAGAAGCAACCTGCAGCCAAGAAACGCTGA ATGGAACCACAGCCTCCAACCGGCATTCACCGATACGTATTAGCCATTTTCAAACAGAACGCCGCCCTCGCCGGCAGGCTCCGACCACCCAACACCCGCAGCAATTTCAGCACCCGACAATTCGCCTCTCAGAATGCCCTCGGCCTTCCCGTCGCCGCCGTCTACTTCAATTCCCAGAAGCAACCTGCAGCCAAGAAACGCTGA MEPQPPTGIHRYVLAIFKQNAALAGRLRPPNTRSNFSTRQFASQNALGLPVAAVYFNSQKQPAAKKR Homology
BLAST of Lsi05G010240 vs. ExPASy Swiss-Prot
Match: Q9XFK7 (Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana OX=3702 GN=MFT PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 5.0e-17 Identity = 38/67 (56.72%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy Swiss-Prot
Match: Q656A5 (Protein MOTHER of FT and TFL1 homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MFT1 PE=3 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 8.9e-14 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy Swiss-Prot
Match: Q9ASJ1 (Protein MOTHER of FT and TFL1 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MFT2 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-13 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy Swiss-Prot
Match: Q9XH44 (CEN-like protein 1 OS=Nicotiana tabacum OX=4097 GN=CET1 PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 4.9e-12 Identity = 32/65 (49.23%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy Swiss-Prot
Match: Q41261 (Protein CENTRORADIALIS OS=Antirrhinum majus OX=4151 GN=CEN PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 4.1e-11 Identity = 33/66 (50.00%), Postives = 44/66 (66.67%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy TrEMBL
Match: A0A6J1KKY5 (protein MOTHER of FT and TFL1-like OS=Cucurbita maxima OX=3661 GN=LOC111495135 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy TrEMBL
Match: A0A6J1EHJ1 (protein MOTHER of FT and TFL1-like OS=Cucurbita moschata OX=3662 GN=LOC111434225 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26 Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy TrEMBL
Match: A0A0A0LRT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G071830 PE=3 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.0e-24 Identity = 57/67 (85.07%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy TrEMBL
Match: A0A1S3B4K3 (protein MOTHER of FT and TFL1-like OS=Cucumis melo OX=3656 GN=LOC103485930 PE=3 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24 Identity = 58/67 (86.57%), Postives = 60/67 (89.55%), Query Frame = 0
BLAST of Lsi05G010240 vs. ExPASy TrEMBL
Match: A0A6A6LTK1 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_018503 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21 Identity = 52/67 (77.61%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of Lsi05G010240 vs. NCBI nr
Match: XP_038893803.1 (protein MOTHER of FT and TFL1-like [Benincasa hispida]) HSP 1 Score: 127.9 bits (320), Expect = 3.3e-26 Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of Lsi05G010240 vs. NCBI nr
Match: XP_023519622.1 (protein MOTHER of FT and TFL1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 127.5 bits (319), Expect = 4.4e-26 Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Lsi05G010240 vs. NCBI nr
Match: XP_023000789.1 (protein MOTHER of FT and TFL1-like [Cucurbita maxima]) HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Lsi05G010240 vs. NCBI nr
Match: KAG7019651.1 (Protein MOTHER of FT and TFL1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25 Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lsi05G010240 vs. NCBI nr
Match: XP_022927391.1 (protein MOTHER of FT and TFL1-like [Cucurbita moschata] >KAG6584038.1 Protein MOTHER of FT and TFL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25 Identity = 60/67 (89.55%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lsi05G010240 vs. TAIR 10
Match: AT1G18100.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 87.8 bits (216), Expect = 3.6e-18 Identity = 38/67 (56.72%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Lsi05G010240 vs. TAIR 10
Match: AT2G27550.1 (centroradialis ) HSP 1 Score: 66.2 bits (160), Expect = 1.1e-11 Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 0
BLAST of Lsi05G010240 vs. TAIR 10
Match: AT5G03840.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 63.5 bits (153), Expect = 7.2e-11 Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of Lsi05G010240 vs. TAIR 10
Match: AT5G62040.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 63.2 bits (152), Expect = 9.4e-11 Identity = 32/65 (49.23%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of Lsi05G010240 vs. TAIR 10
Match: AT4G20370.1 (PEBP (phosphatidylethanolamine-binding protein) family protein ) HSP 1 Score: 57.8 bits (138), Expect = 4.0e-09 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|