Lsi05G009920 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCAAGTAGGGTTATGAAAGGAGAGAAATGGATGGAGAAGAAGGAGAAGGAAGATCATAATATTCATAGGCTTTTTGTGTTGCCTATCATTCAAGTCTTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAATCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCTGGTGGTCGGTTCGTTGTTCATGCACCGCCTGCCATCCCCAACTCTGCTCTCGTCGTTGACTCCGCTGCTCAAAGCTCTTGA ATGGAGGCAAGTAGGGTTATGAAAGGAGAGAAATGGATGGAGAAGAAGGAGAAGGAAGATCATAATATTCATAGGCTTTTTGTGTTGCCTATCATTCAAGTCTTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAATCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCTGGTGGTCGGTTCGTTGTTCATGCACCGCCTGCCATCCCCAACTCTGCTCTCGTCGTTGACTCCGCTGCTCAAAGCTCTTGA ATGGAGGCAAGTAGGGTTATGAAAGGAGAGAAATGGATGGAGAAGAAGGAGAAGGAAGATCATAATATTCATAGGCTTTTTGTGTTGCCTATCATTCAAGTCTTGCAGCGTGCCCCGGTGCCACCGTCCGGTCGCAATCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCTGGTGGTCGGTTCGTTGTTCATGCACCGCCTGCCATCCCCAACTCTGCTCTCGTCGTTGACTCCGCTGCTCAAAGCTCTTGA MEASRVMKGEKWMEKKEKEDHNIHRLFVLPIIQVLQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGGRFVVHAPPAIPNSALVVDSAAQSS Homology
BLAST of Lsi05G009920 vs. ExPASy TrEMBL
Match: A0A0A0LCX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 3.1e-28 Identity = 71/93 (76.34%), Postives = 76/93 (81.72%), Query Frame = 0
BLAST of Lsi05G009920 vs. ExPASy TrEMBL
Match: A0A6J1K3A7 (uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.3e-21 Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Lsi05G009920 vs. ExPASy TrEMBL
Match: A0A6J1ET04 (uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC111437447 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 8.3e-21 Identity = 66/95 (69.47%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of Lsi05G009920 vs. ExPASy TrEMBL
Match: A0A6J1A8S9 (uncharacterized protein LOC110415777 OS=Herrania umbratica OX=108875 GN=LOC110415777 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 9.2e-12 Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Lsi05G009920 vs. ExPASy TrEMBL
Match: A0A061F0W9 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_026263 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10 Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Lsi05G009920 vs. NCBI nr
Match: XP_022995941.1 (uncharacterized protein LOC111491306 [Cucurbita maxima]) HSP 1 Score: 112.1 bits (279), Expect = 2.6e-21 Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Lsi05G009920 vs. NCBI nr
Match: KAG6606390.1 (hypothetical protein SDJN03_03707, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 111.3 bits (277), Expect = 4.5e-21 Identity = 67/95 (70.53%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of Lsi05G009920 vs. NCBI nr
Match: XP_022931191.1 (uncharacterized protein LOC111437447 [Cucurbita moschata]) HSP 1 Score: 109.4 bits (272), Expect = 1.7e-20 Identity = 66/95 (69.47%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of Lsi05G009920 vs. NCBI nr
Match: XP_021283166.1 (uncharacterized protein LOC110415777 [Herrania umbratica]) HSP 1 Score: 79.3 bits (194), Expect = 1.9e-11 Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Lsi05G009920 vs. NCBI nr
Match: EOY11000.1 (Uncharacterized protein TCM_026263 [Theobroma cacao]) HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10 Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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