Lsi05G007390 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G007390
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	MACPF domain-containing protein
Location	chr05: 10156293 .. 10165812 (-)
RNA-Seq Expression	Lsi05G007390
Synteny	Lsi05G007390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGTTATAGATATGTGCCTATTTGTATCTCTTGGATGAAAGATTTCGTTTTGAGTTGCCGTTGTTTCAAGATTTCGTTTGAGTTGCTGTTGTTTAATAAGTGAGTTGTCTTTCAGTGGAGGATTTGAATTGAAAAGAATAAAAGACACGTACACAATGGAGATGTGTGATTAAGAGGGTAAAATGGGAATTCTAAAAAAAATTAAGAGCAAATTGGGAACCTAAACATTCTCCTTTATCCCGCCATTTATATATAGCAAGATTTTTATCTAAAAATAGCTAGGGGAGAAACATTTGTTTTCCCATTTGCTCCTTTTAGTAGATGGTTATAGGGATAATTTATGTAATTTCACATACAACATCATTAAATAAAATATTTTCTTAGCTAATTTAAAAATATCAAAATTTAAAAAATAAATAAAAAATCAAAAGTAAAAAAATCTCATTCTCATTCACGTAGGTTAAAAAAAATATCAATTTTATTGGTTTAAAATATTTTTCTCCTATTTTTGACTAATTTAAAAATATCAAAATTTTAAAAAATAATTAAAAAAAAATCTCATTCTTATTCACGTAGGTTTAAAAACAAATATCAATTTGGTTTAAAATGTTGAGGGATAATAGTATATATGAACTGAATACACTAGCAAACTTATTACAACTCAACTAGAAACACTACATTCAACAAGATGGTGTAACAAGACTTAGATATGATAACTAAAGACTTGAAAAAACCTCAAAACCTTTGGAGACTCAAAATGTAGTCGATGCACACTTCTGTCCTGAAGACAATTATTCGCTTTGCACCGAATGCAAGCAGACTATAGCGATCGTCTCAGCAGGATACAACTACTAACTCCAGTAGAACTGCAACCTCGAACTACTCAGATCTGACAGAACTCTTGGATACTAGCTATCAACTCAACGCAAGTTGAAAAGAAAGAAAGATAGAAAGAAATGAGAGAATTCTTCAATTGAAGTGGGATACTACAAATGAAGAAACAAGTTGCTATTTATAGGCTAGCAACTTAGTAACTTTCCAAAATACAAAATAAAATCAAATAAATACAAAAATTGAAACATTTTTCAAATTTAACTCATTTTAGTTGTTACCTGACAAAAATCACATATAACTTATTCAAATTGAAGAAACTACAAATTTAACTTTCATACATGTTAAATTTGTACATGAAACTCCATCTTAATTTGATGGTTTCAATCCAATTTGAAGTTTCCAACATTGAATTTAATTTATACAATTAAATTCAATTTTTTATGTTTTAAATATTCATCAACATCTCACTTTTTCTTTCACTATAAATATCCAACATAAAATATTTTTGCCCGCCAATTTAAAAAAAAAATCAAAATTTAAAAAATAATAAAAAAATCTCATTCAAATCGCATGTATCAAATTCCCCCAAAATAAAGTGAAGTCACTACTGGTTACAATCTTTTCAATCAAATATATATTATGTAATTGAAAATTATGATTTTTTTTTTCTTTTCTCTAAAAGGTTATGTGTTCAATTTTTCACTATAGATATTGTTATTGATTTTTCTCATAGTTTCAATTTTATATTGGTGTGCATGGGTGGCCAAACTTGAATATAAGGGGATTGATGTAGCCAATTGACTATGTATTTGGCAATGGAATGTCTTGCTTTATTTTTATTTCAACCATTCATGTTTAGAGTGTTGGAAAGTGTAAGTAATCGAAGACGAAATCCAAATAAGATTGTAAAGCATGAGAACGATCAGAAAGATGGTTGGATTAAAGACTGTTGGAACAAAATGAGTTTTGTATTACAAATCAGACTTAAAACGTTCAATCCAAACATAAATTTTGGATTACATTACATTCTCATTCCATTACGGGCATCCAAACATCCCCTCAAAGCTTATAATCTTTTCTATCAAAGGTTATATGATGTATTTGTCTAATTTAATGCTTGAAAAAGATTAGATTAGAACATAATTGCATGACTAAGAATAGTTTGAGCATAAAAATGTTATAACTCTCATAGGGGTAGTTAAAAACATTTCTATAATGTAAATGCATGACTAGATGAAGACATTCATTTTATAATTTAGGACGATATTTACCTTTTTTTTTAAGGTAACATGAAATTTAATCTATGTTTGAAAAAGAAAATCCTTACTCTTGTTGTCTTGACTTATAATTATTGGTTAAATTAAACATAGTTTTCAATATAGTTGAGACATTAAGGGTTTGTTTGGTAGAGAATTTGAAAACAGAAATCTGAAAATAAGGGATTCAATGAAAATAAAGTTGTATTTCATGTTTTCATATATGTGTTTGATAGCAGATTCAGAAATTGGATTTTAATTTTTTTTGGTATCCGTAAGCACCTTGACTAATCTCACGGAACAACCCGCCTGACCCTAATTTAATTTAAACAATTATTTCAAATGTATTTGATATCATATATTTATAAATCATAAAACTAGTTGTAACTACCCACTAATATTTAGTTGACAATAAGCTAATATTAATTAATTTATGAATATGATTTATGTTAAACAAAATTATATAACTATTATTTTGTAATATTATATAATTTATAATACATTACACAATACATATTATATTTTTTAAAAATGATTTGAATTTATAGCATGACACATTGTATTTATAAATGTTTTTAGCTTTATTTAATATAATTTTGCACTTTAAAATTTAAAATTTAAAATTTGGATACAATAAAAATATAAAAATGTTGTTTTCATAATTTAACTGTTTGAATTTGAATTTTTTTTTTAAAATAGAATCCGAGTTCTCTGTCAAACACATATTTGCTGACTAAGTGAATATGAAAACATAAAATAGAATCTAAATTCTCTACCAAACATATCCTAAGCTTTTGTGCGAAGTCAAGTTGGTAGAGTCCCTTCTTTGGAAATTTCTCATTGTTTTGGTTTATTCAAGTTATTTTTACTATCATGTCATTTTATTTTCTCTAAATAATTTTTTTTCTTACAAAAGAAAATAATAAGGAAGTCTTGGAAAACTATCACAATAGTATGAAATTAAAAGAAATCTATTATAAAATATGAACAAAAGAAGAACAAAGAAAGAACAAAAGAACAAAGTAGAAAGAATTAGAAAGTAGAGATAACAATTGAACTCAATTGTGGCGTATCTTACAAAGGCACCATTCCACATAGGATATCAATGGTGTATGTTACATTATGCAATTCAATGGGAGGTTATGGATTTTTGTAACCTATGTAAGTTATGAATATCTACACTAAATATTACATTTATAATATTTCCCTTAGATATCCATATTATATAGAATATATGCCTTGTTAAAACCTTACTAGGAAAAACCCAATGGGATAAAAACCTAGTGAAGGAAAAAGAGTACATTATTCATATATTTTAACAACTGCCTCATTAAAAACTTTATTAGGAAAACCTAGTGGGATAAAACCGTAGTCAAGGGAAAAAGAGTGCAGCACATATAACTCCCCCTCATAAAAACATCACTTGATAACTCATGGTTGTCACATGCAAATGTTGTGACTTAACTTCTCAAATGTTGTTGTAGGTAACACATTCGTCAATAAGTCCTCCAAGTCATCTTTTGAAAATATGTTGAATATTGATGTTGTCATTTTATGCTTTATTGTCTTCAGGTAAAAACACTATTGGAGCCAACATGAATTATCAGGATTTCAATATGATTTAAAGTAATTGTTGTTATGATTTGCTCCATAGGCTGCCATAAAATATAAAAATGCTTCTCCATATACTAAGTAACCTGTTTAGGATCTAGCTCGCAGGGGTTAGATAAGTAATCTGCATCTTCACAACCAATTAAATCATAATTAGGTTTATTATAATAAAATAAATCCACGTAAGCTAATTCTCATATAAAATCTAACATATATTTAAATATACTTCAATATCTTTCTTTTGGAGAAATATTATATCTATGTAACAAAATTACTACAATACTACAACATGTAGTGTATAACTAGTAAGGATATATAAGTGCACTTATTTCCCAAAATTATGGTTCTTCAGGACCCTAATTTTTTTTATTATCTTCCTGAAATCGGATGATATATCTTTTCACATTAGGTGAATGAACCATCACAGGAGTGTTCAATGTTGTAAGTAGTTCATATAAGATATTTTCTGTATAAATTGATGTAATCACATATGTGCACTTTATGTTTTATTTACAAGCTAAGGCAAAACTTTGTTTACTGGGACTTTCATCTCAATTTCTTTTTAAGAAACTTTATTGCCTTTGAAATCTCTTTAGGAGTTTCTATTATATATTCAGATCTTCAACATATACGTATATAGTAAATCTTGACTATGATTTCTTTATAATATCATATTGACAAACAGGGTTATTTTATACCATTATTTCAACAAATCTTTAATAAGATGATCACTATTGCAAATTCTCAGCTGTGTTTTTTTATATAGATATATAAGAATCTTTATGATAAATATAATTCTCTAATATTTGAATTATATGATTTTGGTACCTTTAATCCTTTCGGGATTATCATTATTAAGAGATTCATTAAATGTGGTATGACTGCATCCATAAGATGTATATTAAACTTTTCATACACAGTCAAATAAATTAGATATCTTATGGTATTTTATATCCACCATTAGAGAATATGTTCTATCATAGTCAATACCAATTCATTGTGAGAATTATTGTGGAATCTGTCTCGTTTTATATCATGTGACTTCACTCTATTTGTTTTTCTTATAAATACTCACTTGTATCCCACATTTTTTACATTATCTGAAGTATGGACTACCAGTCTTCACGATTTGAAAAATGAGTTTATTTCTATTGGATTGTTTCTTTCCACATAAGTCAATCCCTTCTATGTCGACATTTTTCAATATATCTAAGTACATAATACTCATTTTCATAAATAATATCGTGAGCAATATTGTATGCAAAAAAAATGTTGTCAACTTATATAAGTATGGTTCCATCATTTTTCTTGTCATGGCATATAATTTCTTGAGATCTCTTTATTATCCTTATTTATTTAAAGATTTTTATGAGTACTCATATTTAGGATTTCTTCTGGAATATCCATATTCTTAACTGAGTCATTTTTTTTTTATTATTGACTACTTTTCGAGGATCTTTATCTTTGGAACCCATTTGTCTATCACGCTTCATGCATGGTGTAGACTCATTAATAATAACAACTTATTGCATTGGGATATCATTGTTAGATGTTGTATTTACAACCAGTATATATAATTTAGTAACTTTCTTACAACTATAAATGCTCTGTAAATACATCTAGCATTTGATTTGTAATATTATTTAAATGAATTATCTTTTGAACTTCTAGTTCAAAGTGATCTGTATGATGATCAAAATGAGACAACACATATGCATTTCATTCAATTTCTTTTTCTAACTTTCTTAATTCCTCCCCTTAATGTTGGAAAATTTGTCTCATTAATGACAAATAGCAAATTGTGTAGTAAATATATCACCCATTAGGGGTTCACAATATTTATTAATTGATTTGAAATTAATTTCAACATAGATTTATAACCTTTTTTTTTTCAATTCCAATTTTAACTAGTGAGAGTTTGATAATTAATCTATTGAGAACAAAGCCACATATGACAATTTATTAGATGGAAGAATCTTCTAGTTCTTCAGTGGATGTCAATGTATATTTTTAATAATTATTTTCACTATTGACCCAAAATGACTCATCATGTCAAATAAAAATATATTTGGATCAATGAACTTCGGGTTCATTGTTGCATATATTTCAATTACACAGATATGTGTAATACAATTTAGAAGGAAAAGCATACAACTTTTCTATATGCATTTCCCGTAGGAGACAATAGATTATCAATTTCTCTAGATGATATTTATTACAATATACACCTTCCAAATTTACTAAACTTCTTTTTGATTTACAAGAGAATGTGGTATATCAATTGTAAATTTTGCTCCTCTGAGCAAAATAATATTTTCTTTTCCAAAATATTTAATCAAGTCTACAGGACTTAATATATATCATATTTGATTTTTCGCTTCAAGCATTTGAATTTTGGAAAATGTATTGTCTACTTCTAAGTATCATATGCATAGATGTATTATATGTAAAACATAAATATTATTAATTATTCTTTTCTTTTCAGGAGATTCAAAAGAAAACTAAATATCTCATATATAAGTGGGTCAAAAAGAATAATAATCTCTTTAGGAGATTCTAAAAACTTGTAACATCCAAATATCATCATATTTAGGGATTAAAATGATAAGTTATGATCTCTTCAAAAGATTCAAATAAATTCTCAAAATTTGCTATACCACACATCGTCTTCATTTTCATTATTAAGGATTTTAAATTTTCAAAAAAGACTCTTAGTGTATGATAGGTACAAGATCATTGTCTCTTTTGCATCACATTTGAAATATGAAATTCACATATAAATATGTGTGGTTTTAATAGAATAATTACTTATTCCTCTATTAAGATTATTTTAATCATAATTATTAAATATTGCAACATTCACGTCAAGGAATAATATTAAATGGTCGAAATTCATTATTTTGCATAAATCATAAGCTTATTAAAATTTATGCAACTTCAGGTGCATTGAATCATAATTAGCTTTAGGAAATAATGAACTATTATGCATAACTTTCAAATTTTACCATGAGAGAATTCATTCAAATATATATTATCACTATATATAAATTTTTAAAGTTTACAAAATCCATATGAGAATAATTTAAATATTCAACAATCCAATAAATTTCAATAGGCAAACAAAAATTTGACTAATTCAACTCCCATGTTGGTTCCCAGGTAGAGGTGTTCCCTTATGGTTAGCTTAAATACCTCATCCTAGCTAGAACCATCTTTAGACAGAGTTATCAAAATCTATTTGCAAACACATAAATCACATATATGATTAAAATAGAGTACTCACCTTATTTTGGACTTTAGTTTTAATAGAATAAAGATGAATGATGGTGGTGAGAAAACCAATGATGAATACATCAAACACATATGTATAATTTTGTTTCCACTAAATCAAACAAGACCAAATCACCAAAATCAAAATATATTTGAACGAAATCTAAATACCTTAAAAATTATGGAGAAAATTCTAGCGGGTCTTTAGCGTTCTTGATATTCCAATGAATTGAATCCAATCTCTACAAAAGCTTCAAAGTAGTAGAGACTCGTGCTGATAACATGTTATAAAATATGAACAAAAGAAGAACAAAGAAAGAACAAAGAAAGAACAAAAGAACAAAGTAAAGAAAATTTAGAAAGTAGAGATAACAATTGAACTCAATTGTTGTATATCTTACAAAGACACCATTCCACACTATTTATAGGACATGAATGATGTATATTACATTATGCAATTCAATGAGAGGTTATAGATCTTTGTAACCTATGTAGGTTATGATATCTACACTAAATATTACATTTATAATAAAATCAAATTATTAACTAATTTTTGTTATACAATTTGTTTATATTTATTTTATTTTATCATGCATCATACTTTTAATTGTTTTTAAAATAATATATACGATGGATGAGAAATTGAAATGCAAGAGATCTCAATCATGAAACACAACTTTAATACAATAATATACTTCACATTTTTTTTAGGAAATACACTTCATAAATTCTTGAAAGGTAAACATGACTCTGTATTAAAAGTTTACGTTATCTATAAAGGTTTGATACAAATTTTACTATTTAGGAACAAAATGATCCTTTTAAAATACAGGAACTAATTAAATAAAATTTAAAAATACAAGCCTAAAATAGATTGTTCTAAAATTATACGAACCAAAATAGATACATACGACAAATGTCACTATTAAAATAAAAAATTATTATAAATAAAAAAATATCAAACTATTTACAAATATAAAAAAGTAGTGACACGATAGAATTCGAAATACTCCTAAACTAAAACAAAAATAAAAAGGTGTAGGTGAGCTTTTTAACTCATCACAGGCAGTGAAGTTAGCTCTACCTAATTTGAAAAGAAAAAAAAAAAACCGGAAAGTTTGACGGTTTACCTGCTTCTCTCTCACGTGTCAATAAAACTCTTTGGTCAAACCCTCCAAAGAAGAATATATATATATATATTTTTTTAATTTTCCTTTTTTCTTTTTCCCTTCTGATAGAAAGAAAAGAATTCCATTTTTGATATTTCTTCGCTTCTAGGGCTCGCACCTTACTCCTCTTTCCTTCGCGTTCTCTTCCTCTCAATTTCCGTCTCGCGTTAGGGCTTTCTCTTTTGTCTCTCTAAGCTCGACTCTGCAATTTCAGTCTCCGATTCGAGGTTGTCAATGTAAGCATTGTGACACTGACGGTTGTTTTTGGAGTTTTCTGCTTCCCCAACTTGGTTCTTTCTGCATTTCTGTCTAATTAGATTCTGGTCTAGACCTTTTCCGTTGTATTTTATTTTTACTTACTTGTGAATTTGAGCTCTTATTGATCCATTTTTGGGGATTGTCAACGAGCTTTGTATAATCACAACGTTAACTTAAGTATAATTGCTGCTACCCCACTGGAGTTTTGGATTCGGTGATGATAGTCTGAACTGTTTAAATTGTGTTTGGGTCAATATTTGACTTGGGATTTGATTTGCTGTAGTGTTTATGGAGATTTGGATCTAGCTTATTTGTTTGAGCTGGATATGTCCTCCACCTCGTATGTCGGGTCTTATTGTTATTATTTTAATTCTTTTAAGTTCCTTGTTTCAGCTTAGTATTTATCTCGTTGGTATTTGCTGCTACTCTGTAGGGTTCATATGGCCTAGGTCAAGAGTGATTTATGCTTAAGTTATGGCGCTTAAAGTTCATCCTTCCAAGGCAGCGGAGATAGCCATTGGATCCATTGGTCGTGGATATGATATAACGATAGATCTAAGGCTCAAGTATTGTAAAGGGAATTTGCATGGTTCTCGGTTGATAGAAATTGATGAATGTGTGGGTCATGAGATTGTTCTTCCTGGTGGGATTTTAATCTCAAATGTACCCAAATCCATTAAGTGTGACAAAGGGGAGCGAACGAGGTTCAGGTCTGATGTTCTCTCTTTCCAACAGGTATTGCTCTTAATTTTTATGCTTGGATAATTATGGATCTGATACTATGATTTTCTTCTGAAAAGCTTTGGTACGATTATGCTGTGGTAGAGTGTGACTCTGCACGATGACCTAGTGTTGGTAATGAGTTTGGCATTTGACTCTGTTGAAATGTAGATAGATTGTTGGGTTAGAGGAGGAATGAAAGAACAGTTTTTACTTTCCTCCATGGTGAATTCTGTCCAATCCTTTATACCCTCACAATTGCATCCACTGAGAAACCACTGTCGTTAACTGGATATAACTTGAAGGTTTGCATTATGTTAGAAAGCACATACTCAGATTCGACCACAGCAACACAGTTAACTAGGACAATTAGAATTTTCACAGGCAAGGGCTAA

mRNA sequence

ATGGAAGAAGGCTCGCACCTTACTCCTCTTTCCTTCGCGTTCTCTTCCTCTCAATTTCCGTCTCGCGTTAGGGCTTTCTCTTTTGTCTCTCTAAGCTCGACTCTGCAATTTCAGTCTCCGATTCGAGGTTGTCAATGTAAGCATTGTGACACTGACGTTATGGCGCTTAAAGTTCATCCTTCCAAGGCAGCGGAGATAGCCATTGGATCCATTGGTCGTGGATATGATATAACGATAGATCTAAGGCTCAAGTATTGTAAAGGGAATTTGCATGGTTCTCGGTTGATAGAAATTGATGAATGTGTGGGTCATGAGATTGTTCTTCCTGGTGGGATTTTAATCTCAAATGTACCCAAATCCATTAAGTGTGACAAAGGGGAGCGAACGAGGTTCAGGTCTGATGTTCTCTCTTTCCAACAGAGGAGGAATGAAAGAACAGTTTTTACTTTCCTCCATGGTGAATTCTGTCCAATCCTTTATACCCTCACAATTGCATCCACTGAGAAACCACTGTCGTTAACTGGATATAACTTGAAGGTTTGCATTATGTTAGAAAGCACATACTCAGATTCGACCACAGCAACACAGTTAACTAGGACAATTAGAATTTTCACAGGCAAGGGCTAA

Coding sequence (CDS)

ATGGAAGAAGGCTCGCACCTTACTCCTCTTTCCTTCGCGTTCTCTTCCTCTCAATTTCCGTCTCGCGTTAGGGCTTTCTCTTTTGTCTCTCTAAGCTCGACTCTGCAATTTCAGTCTCCGATTCGAGGTTGTCAATGTAAGCATTGTGACACTGACGTTATGGCGCTTAAAGTTCATCCTTCCAAGGCAGCGGAGATAGCCATTGGATCCATTGGTCGTGGATATGATATAACGATAGATCTAAGGCTCAAGTATTGTAAAGGGAATTTGCATGGTTCTCGGTTGATAGAAATTGATGAATGTGTGGGTCATGAGATTGTTCTTCCTGGTGGGATTTTAATCTCAAATGTACCCAAATCCATTAAGTGTGACAAAGGGGAGCGAACGAGGTTCAGGTCTGATGTTCTCTCTTTCCAACAGAGGAGGAATGAAAGAACAGTTTTTACTTTCCTCCATGGTGAATTCTGTCCAATCCTTTATACCCTCACAATTGCATCCACTGAGAAACCACTGTCGTTAACTGGATATAACTTGAAGGTTTGCATTATGTTAGAAAGCACATACTCAGATTCGACCACAGCAACACAGTTAACTAGGACAATTAGAATTTTCACAGGCAAGGGCTAA

Protein sequence

MEEGSHLTPLSFAFSSSQFPSRVRAFSFVSLSSTLQFQSPIRGCQCKHCDTDVMALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGILISNVPKSIKCDKGERTRFRSDVLSFQQRRNERTVFTFLHGEFCPILYTLTIASTEKPLSLTGYNLKVCIMLESTYSDSTTATQLTRTIRIFTGKG

Homology

[Close]

BLAST of Lsi05G007390 vs. ExPASy Swiss-Prot
Match: Q9STW5 (MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana OX=3702 GN=At4g24290 PE=2 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 9.8e-27
Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGH-EIVLPGGI 113
           MAL++  SKAAE+AIGSIG GYD+ IDLRLKYCKG    SRL++I E   + EIVLPGGI
Sbjct: 1   MALRLPASKAAEVAIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGI 60

Query: 114 LISNVPKSIKCDKGERTRFRSDVLSFQQ 141
            I NV KSIKCDKGER RFRSD+L FQQ
Sbjct: 61  SIPNVSKSIKCDKGERMRFRSDILPFQQ 88

[Close]

BLAST of Lsi05G007390 vs. ExPASy Swiss-Prot
Match: Q9SGN6 (MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana OX=3702 GN=NSL1 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.6e-19
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 63  AAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGILISNVPKSIK 122
           AAE A+  IG GYD+  D+R   CK    GSRL+EID     +++ PGGI+++NV  SIK
Sbjct: 14  AAEKAVSVIGLGYDLCSDVRFSACKTTPDGSRLVEIDPTRNRDLIFPGGIVVNNVSSSIK 73

Query: 123 CDKGERTRFRSDVLSFQQ 141
           CDKGERTR RSD+LSF Q
Sbjct: 74  CDKGERTRLRSDILSFNQ 91

[Close]

BLAST of Lsi05G007390 vs. ExPASy Swiss-Prot
Match: Q8L612 (MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana OX=3702 GN=At1g14780 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-15
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 65  EIAIGSIGRGYDITIDLRLKYCK---GNLHGSRLIEIDECVGHEIVLPGGILISNVPKSI 124
           E A+ S+G+G+D+T D RLKYCK   G+    RL+ +D+    E+ +PG  +  NV   I
Sbjct: 10  ETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFGVFQNVSADI 69

Query: 125 KCDKGERTRFRSDVLSFQQ 141
            CDKGERTRFRSD+L F +
Sbjct: 70  NCDKGERTRFRSDILDFNK 88

[Close]

BLAST of Lsi05G007390 vs. ExPASy Swiss-Prot
Match: Q9C7N2 (MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana OX=3702 GN=CAD1 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.4e-11
Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 67  AIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGILISNVPKSIKCDKG 126
           AI ++GRG+D+T D+RL YCKG   GSRL+ I+E    ++ L  G L+ NVP  I C +G
Sbjct: 24  AIQALGRGFDVTSDVRLLYCKG-APGSRLVRIEEGQNRDLELSHGFLLPNVPADIDCSRG 83

Query: 127 ERTRFRSDVLSFQQRRNERTVFTFLHGEF------CPILYT---LTIASTEKPLSLTGY 177
                R  V SF +   E  V + + G            YT      A++ K L+L GY
Sbjct: 84  NSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKSLALVGY 141

[Close]

BLAST of Lsi05G007390 vs. ExPASy TrEMBL
Match: A0A0A0L5E1 (MACPF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110020 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 7.2e-41
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDE VGHEIVLPGGIL
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDEGVGHEIVLPGGIL 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVPKSIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPKSIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. ExPASy TrEMBL
Match: A0A6J1JAX4 (MACPF domain-containing protein At4g24290-like OS=Cucurbita maxima OX=3661 GN=LOC111482823 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGN HGSRLIEIDE VGHEIVLPGGIL
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNFHGSRLIEIDEGVGHEIVLPGGIL 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVPKSIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPKSIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. ExPASy TrEMBL
Match: A0A6J1EMJ3 (MACPF domain-containing protein At4g24290-like OS=Cucurbita moschata OX=3662 GN=LOC111435883 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGN HGSRLIEIDE VGHEIVLPGGIL
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNFHGSRLIEIDEGVGHEIVLPGGIL 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVPKSIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPKSIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. ExPASy TrEMBL
Match: A0A5D3BT29 (MACPF domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00720 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDE VGHEIVLPGGI+
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDEGVGHEIVLPGGIV 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVP+SIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPESIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. ExPASy TrEMBL
Match: A0A1S3BTG2 (MACPF domain-containing protein At4g24290 OS=Cucumis melo OX=3656 GN=LOC103493321 PE=4 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 4.7e-40
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDE VGHEIVLPGGI+
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDEGVGHEIVLPGGIV 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVP+SIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPESIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. NCBI nr
Match: XP_004133715.1 (MACPF domain-containing protein At4g24290 [Cucumis sativus] >XP_011650569.1 MACPF domain-containing protein At4g24290 [Cucumis sativus] >KAE8650184.1 hypothetical protein Csa_010735 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.5e-40
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDE VGHEIVLPGGIL
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDEGVGHEIVLPGGIL 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVPKSIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPKSIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. NCBI nr
Match: XP_022984562.1 (MACPF domain-containing protein At4g24290-like [Cucurbita maxima] >XP_022984563.1 MACPF domain-containing protein At4g24290-like [Cucurbita maxima])

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-40
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGN HGSRLIEIDE VGHEIVLPGGIL
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNFHGSRLIEIDEGVGHEIVLPGGIL 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVPKSIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPKSIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. NCBI nr
Match: XP_023552323.1 (MACPF domain-containing protein At4g24290-like [Cucurbita pepo subsp. pepo] >XP_023552324.1 MACPF domain-containing protein At4g24290-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-40
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGN HGSRLIEIDE VGHEIVLPGGIL
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNFHGSRLIEIDEGVGHEIVLPGGIL 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVPKSIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPKSIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. NCBI nr
Match: XP_022929230.1 (MACPF domain-containing protein At4g24290-like [Cucurbita moschata] >XP_022929231.1 MACPF domain-containing protein At4g24290-like [Cucurbita moschata] >KAG7015456.1 MACPF domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-40
Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGN HGSRLIEIDE VGHEIVLPGGIL
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNFHGSRLIEIDEGVGHEIVLPGGIL 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVPKSIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPKSIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. NCBI nr
Match: XP_008452249.1 (PREDICTED: MACPF domain-containing protein At4g24290 [Cucumis melo] >KAA0060601.1 MACPF domain-containing protein [Cucumis melo var. makuwa] >TYK02270.1 MACPF domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 174.5 bits (441), Expect = 9.7e-40
Identity = 84/87 (96.55%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGIL 113
           MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDE VGHEIVLPGGI+
Sbjct: 1   MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDEGVGHEIVLPGGIV 60

Query: 114 ISNVPKSIKCDKGERTRFRSDVLSFQQ 141
           ISNVP+SIKCDKGERTRFRSDVLSFQQ
Sbjct: 61  ISNVPESIKCDKGERTRFRSDVLSFQQ 87

[Close]

BLAST of Lsi05G007390 vs. TAIR 10
Match: AT4G24290.1 (MAC/Perforin domain-containing protein )

HSP 1 Score: 121.7 bits (304), Expect = 6.9e-28
Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGH-EIVLPGGI 113
           MAL++  SKAAE+AIGSIG GYD+ IDLRLKYCKG    SRL++I E   + EIVLPGGI
Sbjct: 1   MALRLPASKAAEVAIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGI 60

Query: 114 LISNVPKSIKCDKGERTRFRSDVLSFQQ 141
            I NV KSIKCDKGER RFRSD+L FQQ
Sbjct: 61  SIPNVSKSIKCDKGERMRFRSDILPFQQ 88

[Close]

BLAST of Lsi05G007390 vs. TAIR 10
Match: AT4G24290.2 (MAC/Perforin domain-containing protein )

HSP 1 Score: 121.7 bits (304), Expect = 6.9e-28
Identity = 62/88 (70.45%), Postives = 70/88 (79.55%), Query Frame = 0


Query: 54  MALKVHPSKAAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGH-EIVLPGGI 113
           MAL++  SKAAE+AIGSIG GYD+ IDLRLKYCKG    SRL++I E   + EIVLPGGI
Sbjct: 1   MALRLPASKAAEVAIGSIGCGYDLAIDLRLKYCKGGSKDSRLLDIKEGDDNCEIVLPGGI 60

Query: 114 LISNVPKSIKCDKGERTRFRSDVLSFQQ 141
            I NV KSIKCDKGER RFRSD+L FQQ
Sbjct: 61  SIPNVSKSIKCDKGERMRFRSDILPFQQ 88

[Close]

BLAST of Lsi05G007390 vs. TAIR 10
Match: AT1G28380.1 (MAC/Perforin domain-containing protein )

HSP 1 Score: 97.1 bits (240), Expect = 1.8e-20
Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 63  AAEIAIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGILISNVPKSIK 122
           AAE A+  IG GYD+  D+R   CK    GSRL+EID     +++ PGGI+++NV  SIK
Sbjct: 14  AAEKAVSVIGLGYDLCSDVRFSACKTTPDGSRLVEIDPTRNRDLIFPGGIVVNNVSSSIK 73

Query: 123 CDKGERTRFRSDVLSFQQ 141
           CDKGERTR RSD+LSF Q
Sbjct: 74  CDKGERTRLRSDILSFNQ 91

[Close]

BLAST of Lsi05G007390 vs. TAIR 10
Match: AT1G14780.1 (MAC/Perforin domain-containing protein )

HSP 1 Score: 84.0 bits (206), Expect = 1.6e-16
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 65  EIAIGSIGRGYDITIDLRLKYCK---GNLHGSRLIEIDECVGHEIVLPGGILISNVPKSI 124
           E A+ S+G+G+D+T D RLKYCK   G+    RL+ +D+    E+ +PG  +  NV   I
Sbjct: 10  ETAVKSLGKGFDLTADFRLKYCKDGDGSAGDDRLVVLDQTQNRELHIPGFGVFQNVSADI 69

Query: 125 KCDKGERTRFRSDVLSFQQ 141
            CDKGERTRFRSD+L F +
Sbjct: 70  NCDKGERTRFRSDILDFNK 88

[Close]

BLAST of Lsi05G007390 vs. TAIR 10
Match: AT1G29690.1 (MAC/Perforin domain-containing protein )

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-12
Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 0


Query: 67  AIGSIGRGYDITIDLRLKYCKGNLHGSRLIEIDECVGHEIVLPGGILISNVPKSIKCDKG 126
           AI ++GRG+D+T D+RL YCKG   GSRL+ I+E    ++ L  G L+ NVP  I C +G
Sbjct: 24  AIQALGRGFDVTSDVRLLYCKG-APGSRLVRIEEGQNRDLELSHGFLLPNVPADIDCSRG 83

Query: 127 ERTRFRSDVLSFQQRRNERTVFTFLHGEF------CPILYT---LTIASTEKPLSLTGY 177
                R  V SF +   E  V + + G            YT      A++ K L+L GY
Sbjct: 84  NSGTQRISVCSFHEMAEEFNVRSGVKGNIPLGCFNAMFNYTGSWQVDAASTKSLALVGY 141

The following BLAST results are available for this feature:

BLAST of Lsi05G007390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STW5	9.8e-27	70.45	MACPF domain-containing protein At4g24290 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
Q9SGN6	2.6e-19	56.41	MACPF domain-containing protein NSL1 OS=Arabidopsis thaliana OX=3702 GN=NSL1 PE=...	[more]
Q8L612	2.3e-15	48.10	MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
Q9C7N2	3.4e-11	36.97	MACPF domain-containing protein CAD1 OS=Arabidopsis thaliana OX=3702 GN=CAD1 PE=...	[more]

BLAST of Lsi05G007390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5E1	7.2e-41	98.85	MACPF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G110020 PE=4 ...	[more]
A0A6J1JAX4	2.1e-40	97.70	MACPF domain-containing protein At4g24290-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1EMJ3	2.1e-40	97.70	MACPF domain-containing protein At4g24290-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3BT29	4.7e-40	96.55	MACPF domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BTG2	4.7e-40	96.55	MACPF domain-containing protein At4g24290 OS=Cucumis melo OX=3656 GN=LOC10349332...	[more]

BLAST of Lsi05G007390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133715.1	1.5e-40	98.85	MACPF domain-containing protein At4g24290 [Cucumis sativus] >XP_011650569.1 MACP...	[more]
XP_022984562.1	4.3e-40	97.70	MACPF domain-containing protein At4g24290-like [Cucurbita maxima] >XP_022984563....	[more]
XP_023552323.1	4.3e-40	97.70	MACPF domain-containing protein At4g24290-like [Cucurbita pepo subsp. pepo] >XP_...	[more]
XP_022929230.1	4.3e-40	97.70	MACPF domain-containing protein At4g24290-like [Cucurbita moschata] >XP_02292923...	[more]
XP_008452249.1	9.7e-40	96.55	PREDICTED: MACPF domain-containing protein At4g24290 [Cucumis melo] >KAA0060601....	[more]

BLAST of Lsi05G007390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G24290.1	6.9e-28	70.45	MAC/Perforin domain-containing protein	[more]
AT4G24290.2	6.9e-28	70.45	MAC/Perforin domain-containing protein	[more]
AT1G28380.1	1.8e-20	56.41	MAC/Perforin domain-containing protein	[more]
AT1G14780.1	1.6e-16	48.10	MAC/Perforin domain-containing protein	[more]
AT1G29690.1	2.4e-12	36.97	MAC/Perforin domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33199:SF17	BNAA01G13800D PROTEIN	coord: 54..143
IPR044663	MACPF domain-containing protein CAD1/NSL1-like	PANTHER	PTHR33199	MACPF DOMAIN-CONTAINING PROTEIN CAD1	coord: 54..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G007390.1	Lsi05G007390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009626	plant-type hypersensitive response
biological_process	GO:2000031	regulation of salicylic acid mediated signaling pathway
biological_process	GO:0006952	defense response
biological_process	GO:0012501	programmed cell death