
Lsi05G007220 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAGTGAGTACGAATCTTTGCCTTCTTAATATATATAGTTGAATTCCTTTAGATGATTGACTTGATCTTCATTTCATTTACCTTTCGTTTATGAATCAATTGTGTTGTTGTCTTGCAAGAAAATGGGAAAAAGAAATTTATATGTTGAAGCCCAGTTTATAACTCTTTTAATGTTGTAATCAAGTAAACTCTATTCAATCAAGCGCAGAATTATTGACAATCTAATTCAGTTTTATACTGATAGAAATCAAATGATGAGTTGTGGAGATCCATAGGTGGTAAAGTGCAGTGAACTACTGTTATGAAATTTCTTTAGGAGCTAAATTTTATCTACTAACTAGCAAGTAAGAAGCATATTGCTTTCTTTCCACTCAAAGTGAAGAGAATCTCTATAGATTTCCTTGGGGTTCATGTGTGAAATAAGTTCAAATTTAATAGTGACCACCCATTCGAGTTTGAGTTTCTTGACAACCAAATGTTGTAGAGTTCGGTTTTAAGCTAGCCTAAACACTTGAATATTAGGAAAAGAAAAGGTAAGAGAATCTTTACGTAGTATACTAAAGTCCAAACTTCCCTATTGTTATGCAGCTTTGTCATTGAAAACCTTTTTTTTTTAAAACTATTATTTTCCTTGCTCTTCTCTTCCATCACTTACAGATCATCGAGGAGTTTCAGAAGTGTCATCTAGATCATCCTGTTGCAAAATTTTTCGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAGTGAGTTTTGTGCTTCCACATTCATATTTTCCTTGCTTTCTTTTCAACTTTACCTGCTCCTTTTTCGTCATCTCAAATGGCACTTTCTATTCTTTGTTTACAGAAAGCTCTGAAACGAAAGGCAAACTTTGAACAGAGTAAAAAAATGAAGGAAAGGCTAGACGCTTTAAGAAAGGAAAACGCTTTATGA ATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAATCATCGAGGAGTTTCAGAAGTGTCATCTAGATCATCCTGTTGCAAAATTTTTCGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAACAGAGTAAAAAAATGAAGGAAAGGCTAGACGCTTTAAGAAAGGAAAACGCTTTATGA ATGCATCCTCCTCTAACTTTGCATAAGCACCCGATGTGTGCTGAAATCATCGAGGAGTTTCAGAAGTGTCATCTAGATCATCCTGTTGCAAAATTTTTCGGTGAATGCACAGATCTCAAAATTAAGCTTGATCGATGTTTCAGGCAGGAAAAAGCTCTGAAACGAAAGGCAAACTTTGAACAGAGTAAAAAAATGAAGGAAAGGCTAGACGCTTTAAGAAAGGAAAACGCTTTATGA MHPPLTLHKHPMCAEIIEEFQKCHLDHPVAKFFGECTDLKIKLDRCFRQEKALKRKANFEQSKKMKERLDALRKENAL Homology
BLAST of Lsi05G007220 vs. ExPASy Swiss-Prot
Match: Q6DHJ6 (COX assembly mitochondrial protein 2 homolog OS=Danio rerio OX=7955 GN=cmc2 PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06 Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy Swiss-Prot
Match: Q2NKR3 (COX assembly mitochondrial protein 2 homolog OS=Bos taurus OX=9913 GN=CMC2 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 4.7e-06 Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy Swiss-Prot
Match: B5FXK1 (COX assembly mitochondrial protein 2 homolog OS=Taeniopygia guttata OX=59729 GN=CMC2 PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 6.1e-06 Identity = 25/66 (37.88%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy Swiss-Prot
Match: Q8K199 (COX assembly mitochondrial protein 2 homolog OS=Mus musculus OX=10090 GN=Cmc2 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05 Identity = 25/70 (35.71%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy Swiss-Prot
Match: O74347 (COX assembly mitochondrial protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cmc1 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 3.9e-05 Identity = 24/78 (30.77%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy TrEMBL
Match: A0A6J1JAI2 (COX assembly mitochondrial protein OS=Cucurbita maxima OX=3661 GN=LOC111482746 PE=3 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 7.6e-36 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy TrEMBL
Match: A0A6J1FQL3 (COX assembly mitochondrial protein OS=Cucurbita moschata OX=3662 GN=LOC111447555 PE=3 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.2e-35 Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy TrEMBL
Match: A0A1S3BTB7 (COX assembly mitochondrial protein OS=Cucumis melo OX=3656 GN=LOC103493308 PE=3 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.8e-35 Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy TrEMBL
Match: A0A6J1C4A0 (COX assembly mitochondrial protein OS=Momordica charantia OX=3673 GN=LOC111008138 PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 6.5e-35 Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Lsi05G007220 vs. ExPASy TrEMBL
Match: A0A2R6Q6N5 (COX assembly mitochondrial protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc21301 PE=3 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.7e-33 Identity = 69/77 (89.61%), Postives = 75/77 (97.40%), Query Frame = 0
BLAST of Lsi05G007220 vs. NCBI nr
Match: XP_038905183.1 (COX assembly mitochondrial protein 2 homolog [Benincasa hispida]) HSP 1 Score: 160.2 bits (404), Expect = 7.1e-36 Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0
BLAST of Lsi05G007220 vs. NCBI nr
Match: XP_022984448.1 (COX assembly mitochondrial protein 2 homolog [Cucurbita maxima] >XP_023539121.1 COX assembly mitochondrial protein 2 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 1.6e-35 Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Lsi05G007220 vs. NCBI nr
Match: XP_004133729.1 (COX assembly mitochondrial protein 2 homolog [Cucumis sativus] >XP_011650575.1 COX assembly mitochondrial protein 2 homolog [Cucumis sativus]) HSP 1 Score: 158.3 bits (399), Expect = 2.7e-35 Identity = 75/78 (96.15%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Lsi05G007220 vs. NCBI nr
Match: XP_022942557.1 (COX assembly mitochondrial protein 2 homolog [Cucurbita moschata]) HSP 1 Score: 157.5 bits (397), Expect = 4.6e-35 Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0
BLAST of Lsi05G007220 vs. NCBI nr
Match: XP_008452227.1 (PREDICTED: COX assembly mitochondrial protein 2 homolog [Cucumis melo]) HSP 1 Score: 156.8 bits (395), Expect = 7.8e-35 Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 0
BLAST of Lsi05G007220 vs. TAIR 10
Match: AT4G21192.1 (Cytochrome c oxidase biogenesis protein Cmc1-like ) HSP 1 Score: 137.1 bits (344), Expect = 6.0e-33 Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0
BLAST of Lsi05G007220 vs. TAIR 10
Match: AT4G21192.2 (Cytochrome c oxidase biogenesis protein Cmc1-like ) HSP 1 Score: 137.1 bits (344), Expect = 6.0e-33 Identity = 61/75 (81.33%), Postives = 70/75 (93.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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