Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAGGTCATATTAGATCCACAAGTTGAAAGTTTATTGATGTTTAAGACATTTATAAAAAGTCAGGGGCTAATTTGATCATAAAATTATTGTTTTTCAATTTAATCTTAAAAACTTTCAAAGTTAACAGAGAGGTATTAATAATGGATCCTTTCATTTTCATCTATGATATAATGTTTTAATTATTGAGCTATACTCCATATGGTTATTAACATATTTGAACGTATAGACACATATGCCTGATATGAAACATCACAATTAAACGGTGAGGATATGTTTGAATGTGGTCAAGTGGTTATAGGATGAAGTTGTGCCCTTTCATGTATGGGTTTGATTAAACCATACATATGAAACATCACGATCTAACAGTGGAGATATGTTTGAACAGACAATCACATCATTTGCCCATTACAATTATTCAATTGAAGTGGTGCATCCTTTTATGTATGAGTGTGATTTAGATCATCAATATGAAACGTCACAATCTAATGTGGACATATGTTTCAACAGATAATTACGTCATTCTTTCTTCAAATTTTCATAGAATTTATTTTATCCTTTTGTTCAAATAGTTACAACTGTTCAAGTCAAACAACGAAAAATAATTGCAAAGCTATCGATAAAACTATTAATCTTACACGTGCATCGCAGGTAACTTCTAACATCATACTCCTAAGCATAGTATTAAATTTCCATCGATATATCGAAATTTTCATCGATATTTTCATGTTTTCATAGGTTCGATATCGATATGAGGAGTGAATCGATATTTTCATTATATCCTAGAAAAATTCATGAAACACAAAAAATAAGCATCAAAATGCCACTTATATAAATATAATATAAATAATAGATTTATTTACTTATTTGAGAATAATAAAATGTTTATTTTCTATCTAGAAATATCCATCGAAATTTCGGTAAAATTAAGACCTTCATATTTCCTTCAACATCGATATTTTAAACATTGCTCCTAAGGGTAATATTGAAATTTCGATCCTAGGAAATTTTGTAGTTTAATAAATTACAAAATTTCCCATGATGTTTCCAAAATTAAGAAGTGGCCCTCAGTGTCTTCGGAGTTTTTCTAGTTTCTCTTAGAATCGGTTGCGTTCAGTTCCGCTCGACGCTCGTGGAGGTTCCATTACATCGACGATGGGAAGGCGATCCGTATGGGTTGCACTTCTCGTCTTTTCTTTTCTTCTTTCTTTGCGACTACACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGATTCAGGTGCTTATTTTCGCCTATGAATTGAACTCCCTCTGTTAGATTCAAATTTTGCGACATGGGTCTCCTTTAATCCGTCTTCAAGCGTATTTTCACTGTTTGATTTCGTAAAAGAGCGATGGATTCGATTGGAAAATTCTGTACACTAAATACTCTAGAGTTTGATTTGGCTTCCTCACGACTTTGTTTATTTAATTAGATAATTTGTTGTAGAGTGTTCCCAATGTTTCTACATGAAGTCCAATGAAAGTTTGTTGATGGTGTTCTGTTAATTCATCTGGGAATCGAACTATTTGAAGTTGTCTGAACCAATCGTTATATTTTCGATCTCTTCTTATGCTCTTGTTCCACTGGAATTGTCTGTTAACATTAAAAGAATGAGGCGAAATCAACTCATTACTTCTCTGCAAAGTTCTGAGTTCATGTTTGTTTCATTTTCTTACTTTTTATGGTTGATTGCAATTTATTACTTGAGGAACATTATTTGATGTATGACCTTCTTTGTTGTCATTTTTCCCTAGGGTTCTAAAGATTCTGCCAGTGAAAGGTAATCTTTTGGTTTCTTTTTATAGTCAGCAATTGACTGTTCCCCCCCTCCCCCCCTTCTTTCGAGTTTTTAGTACTGGACTTAATGCGTTTATACAGACCTAAAGTTCTGAACCTTACAATCAACACAATAGCTTATTCCAAGTAGATGCTATGCTATGGAGTATTTTCCCTTTTGTTATGATGATAATAAAGTTAAATTTTTGGGCTTTGGAGTTGATGTTCAGTACTCCGAAGCAGGATTGGAACAATGCTCATGAGATACATTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGGTATCCATTCAACACTGGAATGGAGTTTCTTTATAATTAATTAATTGTCGATTGCTTGACATGCTTGGTATGTAATGATATGATACTTTATTAAACTAAATTGTAATGTTTTTATCTTGATGCAGTATCTAATACCCTTTGTGGAAAAAAAGAAATTCGAGATTTCTACTAAGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGCGGTAAGTTGCCGTTCATGATTCGACTTCCAACAATAGTAATGATAATTAGTTTGTTATATAAGATCACTATAGAACTTTCTTTTTAAATTGTGGGCTTCCATTAGTTCACTGTATCTAGTCAATTATCTTGGAGAAGTGGATATAACATGAGACTCAAGCTACAATATGTTTAGGCTTCTTGCCTACATAAACATATCTCAGTGGTTAAGGCATTTGCTCTTTCCCTTGAGGAAGGTTCAAATCCCCACCCCCACATTTGTTTTACTTTTAAAATATGTTTGGGCTTCTTTTCGGATATCAGATGGCTTGCATGATCCTTTCTTCCTTGTTCTTCAGGAGCATATCTCTTAGACATTAGAAAAGGCATTGTTTGCTTCAGTTTTAGCTGATGTAGCACTTTGATTATCTTGTTCATGTTTAATCCAGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTGATAGATACAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCGAGAAATAAACATATGTGTGAGGTGACATCAGAAGATTTCCTGCAGATCTCTTCTTTATTTCCTCATAATTCACCACACTTGAACGATTGTTAATTCATCGCAGGGTCTTGCTGACAGCTGTTTTCCCGTCGATGAGGGTGCTTTGGCCAGCCATCTTCACGGTAGCTTCAGGATTTCTCCACTCTCCTCATTTAACAACTTTAACTACTTCCATCATTTATCTAATGAAACACTTTTGGTGTAATTCAAATGGTAGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGTAAGTTGTTTCATTGTAAATATGCATGCACACATGTAAAGCTCCTTTCAATCAGTTTCTTATGGTACATGATGCAAGTATGTTGAGCAATTTTCAAGATCTGGCATTGTTTTCTCTGATTTTGATTGACCATTGATATATGTGTATCATAATATCAACGTGCCTTTATGTAGGCAATGAACTATATCACATAGAGTGCGAAGTAGTAACTGTTTGATCAAACCATCTTTAAATCTGCATTTCACCAATTTATCTAATAATCAGTTTAAGTTCATCTAGTCGTTTTGTATCCTAACAGTCAGCAGGAAAACAGTTCGAACCATATTGCACGAATACATCATTTCTGTTTGAATCAAATTAGAGAGGGGATGAACATGTAATGCATATCTGTATTCCTTTTTTTGCACTTGTACTACTGAAAACCTCTGATGAAATTTCATGTTGTCAAATGCACATTCTTTTGTGTGCTTGCAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTCGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATCTTTCCTTCGCCTACCTTCATTTGTATGATCATAAGATCTTGAACTTTGGTTTGACGGTCGGGTTCGTCTTACAGGGGAATGAGAACTCGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCATAGATAGAACCTTTTTGCCCTTTCAATAA
mRNA sequence
ATGAGTAAGAATCGGTTGCGTTCAGTTCCGCTCGACGCTCGTGGAGGTTCCATTACATCGACGATGGGAAGGCGATCCGTATGGGTTGCACTTCTCGTCTTTTCTTTTCTTCTTTCTTTGCGACTACACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGATTCAGTTAAATTTTTGGGCTTTGGAGTTGATGTTCAGTACTCCGAAGCAGGATTGGAACAATGCTCATGAGATACATTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATACCCTTTGTGGAAAAAAAGAAATTCGAGATTTCTACTAAGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGCGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTGATAGATACAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCGAGAAATAAACATATGGTCTTGCTGACAGCTGTTTTCCCGTCGATGAGGGTGCTTTGGCCAGCCATCTTCACGGTAGCTTCAGGATTTCTCCACTCTCCTCATTTAACAACTTTAACTACTTCCATCATTTATCTAATGAAACACTTTTGGTGTAATTCAAATGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTCGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATCTTTCCTTCGCCTACCTTCATTTGTATGATCATAAGATCTTGAACTTTGGTTTGACGGTCGGGTTCGTCTTACAGGGGAATGAGAACTCGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCATAGATAGAACCTTTTTGCCCTTTCAATAA
Coding sequence (CDS)
ATGAGTAAGAATCGGTTGCGTTCAGTTCCGCTCGACGCTCGTGGAGGTTCCATTACATCGACGATGGGAAGGCGATCCGTATGGGTTGCACTTCTCGTCTTTTCTTTTCTTCTTTCTTTGCGACTACACACAGTTTCTTCCACTCTTCCTCTTCAATCATTGATTCAGTTAAATTTTTGGGCTTTGGAGTTGATGTTCAGTACTCCGAAGCAGGATTGGAACAATGCTCATGAGATACATTGCTCGAGAGAAAGGAGTAGGGCGGCGTGGAAAATAATTGAGGAGTATCTAATACCCTTTGTGGAAAAAAAGAAATTCGAGATTTCTACTAAGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTCGATCAGCACTTTGACAATAGACACTATAATTTGCTCAATGCGAGTCGAAGCAGGTGCTTGGCAGATCTTTGTGGTGCATTGCACTGTGACCATGTGATAGATACAGTATCACAGAAAAGTAAATGCAATCCTGCTGCTGCTGCGAGAAATAAACATATGGTCTTGCTGACAGCTGTTTTCCCGTCGATGAGGGTGCTTTGGCCAGCCATCTTCACGGTAGCTTCAGGATTTCTCCACTCTCCTCATTTAACAACTTTAACTACTTCCATCATTTATCTAATGAAACACTTTTGGTGTAATTCAAATGAATTCTTCTTGCGCCAGTTCTGTGATGCACACACATGTAGCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACAGGCTAGGACGAGTGCGTTCTACATTGTGATTTCAGTTTTGACAGTCCTTTTCGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAGAGGTATCTTTCCTTCGCCTACCTTCATTTGTATGATCATAAGATCTTGAACTTTGGTTTGACGGTCGGGTTCGTCTTACAGGGGAATGAGAACTCGACCACAGGTGCTGAAGCGTCTCTCACAAAGTGGAAGAAAGAAAAAACCTTCATAGATAGAACCTTTTTGCCCTTTCAATAA
Protein sequence
MSKNRLRSVPLDARGGSITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKRYLSFAYLHLYDHKILNFGLTVGFVLQGNENSTTGAEASLTKWKKEKTFIDRTFLPFQ
Homology
BLAST of Lsi05G004840 vs. ExPASy TrEMBL
Match:
A0A5A7URM7 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00300 PE=4 SV=1)
HSP 1 Score: 417.5 bits (1072), Expect = 5.6e-113
Identity = 217/287 (75.61%), Postives = 229/287 (79.79%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRS+ VALLVFS LLSLR HTVSSTLPLQSL Q + STPKQDWNNAHE+HC
Sbjct: 1 MGRRSIRVALLVFSLLLSLRPHTVSSTLPLQSLNQGSNSKDSASGSTPKQDWNNAHEVHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 61 SRERSRAAWKVIEEYLMPFVEKKKYEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
RKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARN
Sbjct: 121 RKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F V G L S HL +EFFLRQFC
Sbjct: 181 KHM---------CEGLADSCFPVDEGALAS-HL------------------HEFFLRQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Sbjct: 241 DAHTCSGKPKPFSRGRQVRTSVFYIVISVLTILFVMFFYVFFYLYNR 259
BLAST of Lsi05G004840 vs. ExPASy TrEMBL
Match:
A0A1S3BMS8 (uncharacterized protein LOC103491758 OS=Cucumis melo OX=3656 GN=LOC103491758 PE=4 SV=1)
HSP 1 Score: 416.8 bits (1070), Expect = 9.5e-113
Identity = 217/287 (75.61%), Postives = 229/287 (79.79%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRS+ VALLVFS LLSLR HTVSSTLPLQS LN + STPKQDWNNAHE+HC
Sbjct: 1 MGRRSIRVALLVFSLLLSLRPHTVSSTLPLQS---LNQGSNSASGSTPKQDWNNAHEVHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 61 SRERSRAAWKVIEEYLMPFVEKKKYEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
RKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARN
Sbjct: 121 RKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F V G L S HL +EFFLRQFC
Sbjct: 181 KHM---------CEGLADSCFPVDEGALAS-HL------------------HEFFLRQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Sbjct: 241 DAHTCSGKPKPFSRGRQVRTSVFYIVISVLTILFVMFFYVFFYLYNR 256
BLAST of Lsi05G004840 vs. ExPASy TrEMBL
Match:
A0A0A0L8D2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592150 PE=4 SV=1)
HSP 1 Score: 411.4 bits (1056), Expect = 4.0e-111
Identity = 213/287 (74.22%), Postives = 227/287 (79.09%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRS+ VALL+FS LLSLR HTVSSTLPLQSL Q + STPKQDWNNAHE+HC
Sbjct: 1 MGRRSIRVALLIFSLLLSLRPHTVSSTLPLQSLNQGSNSKDSASESTPKQDWNNAHEVHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWK+IEEYL+PFVEKKK++ISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 61 SRERSRAAWKVIEEYLMPFVEKKKYKISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
RKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARN
Sbjct: 121 RKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F V G L S HL +EFFL QFC
Sbjct: 181 KHM---------CEGLADSCFPVDEGALAS-HL------------------HEFFLHQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ R S FYIVISVLT+LFV+FFYVF YLY R
Sbjct: 241 DAHTCSGKPKPFSRGRQVRRSVFYIVISVLTILFVMFFYVFFYLYNR 259
BLAST of Lsi05G004840 vs. ExPASy TrEMBL
Match:
A0A6J1DL16 (uncharacterized protein LOC111021515 OS=Momordica charantia OX=3673 GN=LOC111021515 PE=4 SV=1)
HSP 1 Score: 394.4 bits (1012), Expect = 5.1e-106
Identity = 205/291 (70.45%), Postives = 230/291 (79.04%), Query Frame = 0
Query: 18 ITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAH 77
+T+TMGRRS+WVALLV LL +R H VSSTLPLQ LIQ + + L STPKQD+NNAH
Sbjct: 1 MTATMGRRSIWVALLVPFLLLFMRPHGVSSTLPLQPLIQGSKDSAPL--STPKQDFNNAH 60
Query: 78 EIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWK 137
E+HCSRERSR AWKIIEEYL+PFV K+K++IST CRLHPDNDMFRDQEQHKSHLDFN+WK
Sbjct: 61 EVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWK 120
Query: 138 CGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAA 197
CGYCRKRFYEEKYLDQHFDNRHY+LLN SR +CLAD+CGALHCD V++TVSQKSKCNPAA
Sbjct: 121 CGYCRKRFYEEKYLDQHFDNRHYDLLNTSRIKCLADVCGALHCDRVVETVSQKSKCNPAA 180
Query: 198 AARNKHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFL 257
AAR KHM VL + F VA G + HL +EFFL
Sbjct: 181 AARKKHM---------CEVLADSCFPVAEG-ASASHL------------------HEFFL 240
Query: 258 RQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
RQFCDAHTCSGKPKPFS+G++ RTS FYIVIS+LTVLFVLFFYVFIYLYKR
Sbjct: 241 RQFCDAHTCSGKPKPFSQGQEVRTSWFYIVISILTVLFVLFFYVFIYLYKR 261
BLAST of Lsi05G004840 vs. ExPASy TrEMBL
Match:
A0A6J1F459 (uncharacterized protein LOC111441996 OS=Cucurbita moschata OX=3662 GN=LOC111441996 PE=4 SV=1)
HSP 1 Score: 391.7 bits (1005), Expect = 3.3e-105
Identity = 204/287 (71.08%), Postives = 224/287 (78.05%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRS+WVALLV S LL R H VSSTLPLQSL Q + STPKQD NNAHE+HC
Sbjct: 1 MGRRSLWVALLVLSLLLYSRPHGVSSTLPLQSLNQGS--KDSATESTPKQDLNNAHEVHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWKIIEEYL+PF++KK++++STKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 61 SRERSRAAWKIIEEYLMPFMDKKRYKVSTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
+K+FYEEKYLDQHF NRHY+LLN SRS+CLAD CGALHCD VIDT+SQKSKCNPAAAARN
Sbjct: 121 KKKFYEEKYLDQHFANRHYDLLNVSRSKCLADFCGALHCDRVIDTISQKSKCNPAAAARN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F + G + HL +EFFLRQFC
Sbjct: 181 KHM---------CEGLADSCFPIDDG-ASASHL------------------HEFFLRQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ RTS FYIVISVLTV+FVLFFYVFIYLYKR
Sbjct: 241 DAHTCSGKPKPFSRGRQVRTSVFYIVISVLTVIFVLFFYVFIYLYKR 257
BLAST of Lsi05G004840 vs. NCBI nr
Match:
KAA0056275.1 (Zinc finger family protein [Cucumis melo var. makuwa] >TYK05224.1 Zinc finger family protein [Cucumis melo var. makuwa])
HSP 1 Score: 417.5 bits (1072), Expect = 1.2e-112
Identity = 217/287 (75.61%), Postives = 229/287 (79.79%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRS+ VALLVFS LLSLR HTVSSTLPLQSL Q + STPKQDWNNAHE+HC
Sbjct: 1 MGRRSIRVALLVFSLLLSLRPHTVSSTLPLQSLNQGSNSKDSASGSTPKQDWNNAHEVHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 61 SRERSRAAWKVIEEYLMPFVEKKKYEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
RKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARN
Sbjct: 121 RKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F V G L S HL +EFFLRQFC
Sbjct: 181 KHM---------CEGLADSCFPVDEGALAS-HL------------------HEFFLRQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Sbjct: 241 DAHTCSGKPKPFSRGRQVRTSVFYIVISVLTILFVMFFYVFFYLYNR 259
BLAST of Lsi05G004840 vs. NCBI nr
Match:
XP_008450049.1 (PREDICTED: uncharacterized protein LOC103491758 [Cucumis melo])
HSP 1 Score: 416.8 bits (1070), Expect = 2.0e-112
Identity = 217/287 (75.61%), Postives = 229/287 (79.79%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRS+ VALLVFS LLSLR HTVSSTLPLQS LN + STPKQDWNNAHE+HC
Sbjct: 1 MGRRSIRVALLVFSLLLSLRPHTVSSTLPLQS---LNQGSNSASGSTPKQDWNNAHEVHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWK+IEEYL+PFVEKKK+EISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 61 SRERSRAAWKVIEEYLMPFVEKKKYEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
RKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARN
Sbjct: 121 RKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F V G L S HL +EFFLRQFC
Sbjct: 181 KHM---------CEGLADSCFPVDEGALAS-HL------------------HEFFLRQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ RTS FYIVISVLT+LFV+FFYVF YLY R
Sbjct: 241 DAHTCSGKPKPFSRGRQVRTSVFYIVISVLTILFVMFFYVFFYLYNR 256
BLAST of Lsi05G004840 vs. NCBI nr
Match:
XP_038891552.1 (uncharacterized protein LOC120080934 [Benincasa hispida])
HSP 1 Score: 416.4 bits (1069), Expect = 2.6e-112
Identity = 218/287 (75.96%), Postives = 229/287 (79.79%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRSVWVALLVF LLSLR HTVSS LPLQ+L Q + STPKQDWNNAHE+HC
Sbjct: 2 MGRRSVWVALLVFYLLLSLRPHTVSSVLPLQALNQ--GFKDSASESTPKQDWNNAHEVHC 61
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWKIIEEYL+PFVEKKK++IS+KCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 62 SRERSRAAWKIIEEYLMPFVEKKKYKISSKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 121
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
RKRFYEEKYLDQHFDNRHYNLLN SRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN
Sbjct: 122 RKRFYEEKYLDQHFDNRHYNLLNVSRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 181
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F V G + HL +EFFLRQFC
Sbjct: 182 KHM---------CEGLADSCFPVDEG-ASASHL------------------HEFFLRQFC 241
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ R + FYIVISVLTVLFVLFFYVFIYLYKR
Sbjct: 242 DAHTCSGKPKPFSRGRQVRKNVFYIVISVLTVLFVLFFYVFIYLYKR 258
BLAST of Lsi05G004840 vs. NCBI nr
Match:
XP_004145681.1 (uncharacterized protein LOC101219582 [Cucumis sativus] >KGN58210.1 hypothetical protein Csa_017409 [Cucumis sativus])
HSP 1 Score: 411.4 bits (1056), Expect = 8.3e-111
Identity = 213/287 (74.22%), Postives = 227/287 (79.09%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGRRS+ VALL+FS LLSLR HTVSSTLPLQSL Q + STPKQDWNNAHE+HC
Sbjct: 1 MGRRSIRVALLIFSLLLSLRPHTVSSTLPLQSLNQGSNSKDSASESTPKQDWNNAHEVHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAWK+IEEYL+PFVEKKK++ISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC
Sbjct: 61 SRERSRAAWKVIEEYLMPFVEKKKYKISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
RKRFYEEKY+DQHFDNRHYNLLN SR+RCLADLCGALHCDHVID VSQKSKCNPAAAARN
Sbjct: 121 RKRFYEEKYIDQHFDNRHYNLLNVSRNRCLADLCGALHCDHVIDAVSQKSKCNPAAAARN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
KHM L + F V G L S HL +EFFL QFC
Sbjct: 181 KHM---------CEGLADSCFPVDEGALAS-HL------------------HEFFLHQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTCSGKPKPFSRGRQ R S FYIVISVLT+LFV+FFYVF YLY R
Sbjct: 241 DAHTCSGKPKPFSRGRQVRRSVFYIVISVLTILFVMFFYVFFYLYNR 259
BLAST of Lsi05G004840 vs. NCBI nr
Match:
XP_022154197.1 (uncharacterized protein LOC111021515 [Momordica charantia])
HSP 1 Score: 394.4 bits (1012), Expect = 1.0e-105
Identity = 205/291 (70.45%), Postives = 230/291 (79.04%), Query Frame = 0
Query: 18 ITSTMGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAH 77
+T+TMGRRS+WVALLV LL +R H VSSTLPLQ LIQ + + L STPKQD+NNAH
Sbjct: 1 MTATMGRRSIWVALLVPFLLLFMRPHGVSSTLPLQPLIQGSKDSAPL--STPKQDFNNAH 60
Query: 78 EIHCSRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWK 137
E+HCSRERSR AWKIIEEYL+PFV K+K++IST CRLHPDNDMFRDQEQHKSHLDFN+WK
Sbjct: 61 EVHCSRERSRVAWKIIEEYLMPFVNKRKYKISTDCRLHPDNDMFRDQEQHKSHLDFNEWK 120
Query: 138 CGYCRKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAA 197
CGYCRKRFYEEKYLDQHFDNRHY+LLN SR +CLAD+CGALHCD V++TVSQKSKCNPAA
Sbjct: 121 CGYCRKRFYEEKYLDQHFDNRHYDLLNTSRIKCLADVCGALHCDRVVETVSQKSKCNPAA 180
Query: 198 AARNKHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFL 257
AAR KHM VL + F VA G + HL +EFFL
Sbjct: 181 AARKKHM---------CEVLADSCFPVAEG-ASASHL------------------HEFFL 240
Query: 258 RQFCDAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
RQFCDAHTCSGKPKPFS+G++ RTS FYIVIS+LTVLFVLFFYVFIYLYKR
Sbjct: 241 RQFCDAHTCSGKPKPFSQGQEVRTSWFYIVISILTVLFVLFFYVFIYLYKR 261
BLAST of Lsi05G004840 vs. TAIR 10
Match:
AT5G40710.1 (zinc finger (C2H2 type) family protein )
HSP 1 Score: 248.4 bits (633), Expect = 8.6e-66
Identity = 126/265 (47.55%), Postives = 173/265 (65.28%), Query Frame = 0
Query: 55 IQLNFWALELMFSTPKQDW-------NNAHEIHCSRERSRAAWKIIEEYLIPFVEKKKFE 114
I FW L S +Q+ + HEIHCSRERSR AWKII+EYL+P+VEK++++
Sbjct: 19 ISSQFWGFSLPTSIIQQNLEGFKDPEDGFHEIHCSRERSRVAWKIIQEYLMPYVEKERYQ 78
Query: 115 ISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYNLLNASR 174
+ + CR+H DND++R+QE+HK D N+W+CG+C+K FYEEKYLD+HFD+RHYNLLNAS
Sbjct: 79 LPSTCRVHRDNDIYREQEEHKLRSDINEWRCGFCKKAFYEEKYLDKHFDSRHYNLLNASH 138
Query: 175 SRCLADLCGALHCDHVIDTVSQKSKCNPAAAARNKHMV--LLTAVFPSMRVLWPAIFTVA 234
+CL+DLCGALHCD V+DT KSKCNPAAAA+N+H+ L + FP + +
Sbjct: 139 GKCLSDLCGALHCDLVVDTARLKSKCNPAAAAKNRHLCESLANSCFPVNK-------GSS 198
Query: 235 SGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFCDAHTCSGKPKPFSRGRQARTSAFY 294
+ LH +FFLRQFCDAHTCSG KP S+ + + S Y
Sbjct: 199 ANRLH-----------------------DFFLRQFCDAHTCSGGSKPLSQ-KPKKRSIVY 252
Query: 295 IVISVLTVLFVLFFYVFIYLYKRYL 311
I+ S++ ++ +L +Y F+YL++R L
Sbjct: 259 IIFSIIVLVVLLLYYSFVYLFRRGL 252
BLAST of Lsi05G004840 vs. TAIR 10
Match:
AT5G63280.1 (C2H2-like zinc finger protein )
HSP 1 Score: 248.4 bits (633), Expect = 8.6e-66
Identity = 133/287 (46.34%), Postives = 181/287 (63.07%), Query Frame = 0
Query: 22 MGRRSVWVALLVFSFLLSLRLHTVSSTLPLQSLIQLNFWALELMFSTPKQDWNNAHEIHC 81
MGR +W +L V LL L LH QS+ Q + + + +NA EIHC
Sbjct: 1 MGR--LWESLPVILLLLVLLLH--------QSVSQGFEESESTRLVNEEVEVSNAPEIHC 60
Query: 82 SRERSRAAWKIIEEYLIPFVEKKKFEISTKCRLHPDNDMFRDQEQHKSHLDFNDWKCGYC 141
SRERSRAAW+II++YL PFVE++++EI CRLHPDND++RDQE HK H+D +WKCGYC
Sbjct: 61 SRERSRAAWQIIQDYLTPFVERERYEIPKNCRLHPDNDLYRDQEHHKVHVDVFEWKCGYC 120
Query: 142 RKRFYEEKYLDQHFDNRHYNLLNASRSRCLADLCGALHCDHVIDTVSQKSKCNPAAAARN 201
+K F +EK+LD+HF RHYNLLN + ++CLADLCGALHCD V+ + KSKCNP A A+N
Sbjct: 121 KKSFNDEKFLDKHFSTRHYNLLNTTDTKCLADLCGALHCDFVLSSKKPKSKCNPPAVAKN 180
Query: 202 KHMVLLTAVFPSMRVLWPAIFTVASGFLHSPHLTTLTTSIIYLMKHFWCNSNEFFLRQFC 261
+H+ A + F V+ G P + L +E FLRQFC
Sbjct: 181 RHLCESVA---------NSCFPVSQG----PSASRL---------------HEHFLRQFC 240
Query: 262 DAHTCSGKPKPFSRGRQARTSAFYIVISVLTVLFVLFFYVFIYLYKR 309
DAHTC+G KPF RG + ++ FY+ IS+LT++ + FY+ ++L++R
Sbjct: 241 DAHTCTGNDKPFPRGGKKKSGVFYLAISILTLMLLPLFYLLVFLHQR 249
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7URM7 | 5.6e-113 | 75.61 | Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff... | [more] |
A0A1S3BMS8 | 9.5e-113 | 75.61 | uncharacterized protein LOC103491758 OS=Cucumis melo OX=3656 GN=LOC103491758 PE=... | [more] |
A0A0A0L8D2 | 4.0e-111 | 74.22 | C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G592150 P... | [more] |
A0A6J1DL16 | 5.1e-106 | 70.45 | uncharacterized protein LOC111021515 OS=Momordica charantia OX=3673 GN=LOC111021... | [more] |
A0A6J1F459 | 3.3e-105 | 71.08 | uncharacterized protein LOC111441996 OS=Cucurbita moschata OX=3662 GN=LOC1114419... | [more] |
Match Name | E-value | Identity | Description | |
KAA0056275.1 | 1.2e-112 | 75.61 | Zinc finger family protein [Cucumis melo var. makuwa] >TYK05224.1 Zinc finger fa... | [more] |
XP_008450049.1 | 2.0e-112 | 75.61 | PREDICTED: uncharacterized protein LOC103491758 [Cucumis melo] | [more] |
XP_038891552.1 | 2.6e-112 | 75.96 | uncharacterized protein LOC120080934 [Benincasa hispida] | [more] |
XP_004145681.1 | 8.3e-111 | 74.22 | uncharacterized protein LOC101219582 [Cucumis sativus] >KGN58210.1 hypothetical ... | [more] |
XP_022154197.1 | 1.0e-105 | 70.45 | uncharacterized protein LOC111021515 [Momordica charantia] | [more] |