Lsi05G004520 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGAGAAACGTGAAGTTTTTCAATTGTTTTTTGTACGAAACGGATCATGTGAAACAACAAAAACCAAAAACCAAAAACAATCCATTCAAATCTATCTGCTTGTTAGTGTTATTGAGCAAAAGCCCTTTTCCCACACCGCACCCACCGGCCCATCTCCGATCAGATCTGTTACCTTTTTCTCTAGATCTGCCCACCCACCAAAAACAAAAATTAAAACAACCCCTCGATTCCTTTCAATCTAAAATCCCCTCCTTGCATTATGCAGAATTCTTGCTCCCAAATGCTCAATCATGAGCATTTTCACTGAGGAAATCGCTGAGATCGATAAGGTTTGTGCATCGGTTTCGCTGAAATGGGATCGGCACAGTCCGTGCAATTAGCCGAGGAAAGAGAGGAGGACGAAGAGGAGGAAGAAGAAGACGATGAAGATGATGGTGATGATAATGTCGAGCCGGCCAGAGCTGAACTGGATAACTATTTGGTCAAGAAGGTTCTCGAGCAGGAGCCGGAGATGCTGCCTTGTCACGCATTAGCTTCGCCGTTGTCTCCTCAGCCGTCGTCACTTGGTACGCCTCGATTGGGGCCGGCGATCAAGGTTTGGGACCCGTATAATGTTCTGGCGCCACCGCCGCAGCTGCCTCCGCCGCCGTTGTTCACGCGGAGCTTCTCGTCCAGTTCGATTGACGACGATCGGGTGGTTATGGAGGTTTTTCTGATTAGCCATGGAGAGTGCGAGTTGAATTTGAGGTCGGACTTGGTCGGCGGGCGGTGCCCTGAGGCGGGTTTGACGCCGAAAGGCAAGCGGCAGGGGAGAGCGTTGGCGGTGTTCTTGAAATCTCAGGGGGTTCGTTTCAATGCCGTGTATTCGTCTCCCTTGGATCGGGCCCGATCCATGGCGGTTTCGGTTTGCCAGGTAATAATCCCCTCGCCTTATGCTCATGAACTGTTTGTCAATTGTCCTCTGAGACATTCATTTCCGTTTTACAATAAACTCAGAATCTATGAAGATTTTACAATAAACTAGCTAAATGAGGAATCGGCTACGCTGTGCCCATTGTATCATAGTTTAGGCAAGCAAGCAAGCAATTGATGGTGTTAAGCCTTAGCCAACTATTATTGCATTTGAATACTTCAAGAATCCCAGCCAGATGATGATATTCTTAGTTGAATTCTGTAGGGTTATTAATGATTTGTTCTGTTGGGGTTGGATTTTATTGGTTGAAAATCTTGCCTGTATGTTAGAAACTATCTCCTGTAATAGCATTGTTGTAGAATCGAGGTATTTGATTGAAACCGGTTAATGCCTGCGTTACATTACATCTTTGATTCTTTTTTCTGGATTGTTTCTTTTCTTGAATTATGTAAACCATCTATGCAATGAACTTGCAGGAAATGAATTTTATGGAGGAACAAATACAAAATTCAGATGCCCTTACAGAGATGAGTCAGGGGCACTGGGAGCGTTGCCTTCGGTCTGAAATATATACACCTGAAACATTGAACTTCATTGATAGAATTCAACCCGACTTCTCTCCACCAGATGGAGAATCGCTTAGGCAGGTTGAATTCCGTATGGTTCATTTTCTTAATGGAACCATCTTGGAACTTCCCGAAAAGCTGAGGTCAGATGTTTTATCACACCGTCCCAATGAGACACTTCAAATGTCACACGAACTAACCAACTCAATTCACGATCGAGATGGGCATTCTCTCCCATCCCCACATTGGGATTTGCCTCATAGGCAGCGACACGGGATCACAAGGAGAAAGTCTGGCAAAAGCAGGCTACAAACTGTAACCACCACCGGAGAACATGAAGCTGAAGACGAGGTCTCCCCTCATGATGCCACTCACCAAAGTACACTAAATGATCTAAATATCAGGAACTCTTCCTCGTGTACGACTTGTATCGGCATCTTCACACATTCAATTCCAATTAAATGTCTCCTCGCAGGCCTCCTCGAATGCAGCTTGGTAATGCTGCACAAGTTTTGCATTGAAGATTCATCCGTGACGGTTTTACAACATTCACTAAAATCAGGCTGGCAGATAAAGACGTTGAACGATACTGCACACCTCAGGCTTCTCTAATGAAAGCAATTCCACTTCCCTACCGGCCGATTCCAACGCCGTAAGAGTATCTGTTATCACATAATGGCCAAATCTGCCATTTATATAATTTTTGGATTGAACTTTTCTTTTTAATCCTTTTCCTCATGGTTTTTTGCACTAGCAGGCAATATTCCTGAATCCCTGTTGTAAACTTTTTAGTATTTATGATAGATTCAACCCCCCCACACCTCTCACAGAATTATGGCAAAGTGAAAGTTGCTGTATCAAGTGATTCTTTTGATATGTACCATTTTATCATTGATCTTATATGATTGAACTATACAAACAGGCACAATCTTCTCGTGAAAGCAGTTCGGCATCGCAGCTTGAGACGGATGGGAAATCTACTTGCTTGGTTGTTTTGATCAGAAAATACTGTTTTTTTTTCGTTTTTTTTATTTTCTTCCTTATCATTTGCAGACATTGTTAAGTGGAAGTAAAAACTCCTGTTGGCATAAAAGTACTTTTCTGTTGTTGGTTGTTGTCCTTGAAGAAATTGAAGGGGAAGGACATGGACAACCAAATTGCTGCTAGAAAGTAGAAAGAAAGCTTTTTCATTTTGTCATAAAATGGTGCCGTCACATGGGCTGTGGGTCTGAGATTAGAAGAAAAAAGAGACCCCCTTGAGACTGGAACTTCTTGTACGCCATTAAAATGGCTATCTCTTCCTTTCTCACGTAAATGGTGGAATCTTTCTGTACTTTGACGAACGAAACCAGACAAAAAACAAACAGATCAAAGAGAAAACAAAGAGCTTTTATATCATCAAAGTTACAAAACGACATGGTTCGTAATTTCCTGTGGATAAAACTGTCATTCCCGTGATGTTCAATCACTATTCCAACAGTTATCCACTTCACAAAACTCTTTTTTACTGGTTTATCCTCTTCTTTTGCCATAATCCCCATCAATCTTTATATACCAGCTGTTTCTTCTTCATTGGTTGCTATACAATTTCTTACAGAAAGATCTCTCTGCATCAATGGCTACGGCGGCAGTCTGCTTCTGTGTTGCCTTGTCTCTGGCAACCCTTTTTGCCTTATCTCTGGCAACCGGCTCTTCAATATCGGCTTCTCCGGCGGTTTCACCTCACAGAACTTCCCAAAATATGTCTTCATTTTTCCCTTCTCCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCTGCATCGGCACGGGGCTCTGGCGAGTTCGTGGGAAAGAGTGGGTCAAGTTATGTGAAGCTCAATCAGGGGGTCTCAGCATTTGGTCTGAGCATTTGTAGTTTGTTTAGTTTAAGAGTTTTTCTTCGTGTTTGA CAGAGAAACGTGAAGTTTTTCAATTGTTTTTTGTACGAAACGGATCATGTGAAACAACAAAAACCAAAAACCAAAAACAATCCATTCAAATCTATCTGCTTGTTAGTGTTATTGAGCAAAAGCCCTTTTCCCACACCGCACCCACCGGCCCATCTCCGATCAGATCTGTTACCTTTTTCTCTAGATCTGCCCACCCACCAAAAACAAAAATTAAAACAACCCCTCGATTCCTTTCAATCTAAAATCCCCTCCTTGCATTATGCAGAATTCTTGCTCCCAAATGCTCAATCATGAGCATTTTCACTGAGGAAATCGCTGAGATCGATAAGGTTTGTGCATCGGTTTCGCTGAAATGGGATCGGCACAGTCCGTGCAATTAGCCGAGGAAAGAGAGGAGGACGAAGAGGAGGAAGAAGAAGACGATGAAGATGATGGTGATGATAATGTCGAGCCGGCCAGAGCTGAACTGGATAACTATTTGGTCAAGAAGGTTCTCGAGCAGGAGCCGGAGATGCTGCCTTGTCACGCATTAGCTTCGCCGTTGTCTCCTCAGCCGTCGTCACTTGGTACGCCTCGATTGGGGCCGGCGATCAAGGTTTGGGACCCGTATAATGTTCTGGCGCCACCGCCGCAGCTGCCTCCGCCGCCGTTGTTCACGCGGAGCTTCTCGTCCAGTTCGATTGACGACGATCGGGTGGTTATGGAGGTTTTTCTGATTAGCCATGGAGAGTGCGAGTTGAATTTGAGGTCGGACTTGGTCGGCGGGCGGTGCCCTGAGGCGGGTTTGACGCCGAAAGGCAAGCGGCAGGGGAGAGCGTTGGCGGTGTTCTTGAAATCTCAGGGGGTTCGTTTCAATGCCGTGTATTCGTCTCCCTTGGATCGGGCCCGATCCATGGCGGTTTCGGTTTGCCAGGAAATGAATTTTATGGAGGAACAAATACAAAATTCAGATGCCCTTACAGAGATGAGTCAGGGGCACTGGGAGCGTTGCCTTCGGTCTGAAATATATACACCTGAAACATTGAACTTCATTGATAGAATTCAACCCGACTTCTCTCCACCAGATGGAGAATCGCTTAGGCAGGTTGAATTCCGTATGGTTCATTTTCTTAATGGAACCATCTTGGAACTTCCCGAAAAGCTGAGGTCAGATGTTTTATCACACCGTCCCAATGAGACACTTCAAATGTCACACGAACTAACCAACTCAATTCACGATCGAGATGGGCATTCTCTCCCATCCCCACATTGGGATTTGCCTCATAGGCAGCGACACGGGATCACAAGGAGAAAGTCTGGCAAAAGCAGGCTACAAACTGTAACCACCACCGGAGAACATGAAGCTGAAGACGAGGTCTCCCCTCATGATGCCACTCACCAAAGTACACTAAATGATCTAAATATCAGGAACTCTTCCTCGTGTACGACTTGTATCGGCATCTTCACACATTCAATTCCAATTAAATGTCTCCTCGCAGGCCTCCTCGAATGCAGCTTGAAAGATCTCTCTGCATCAATGGCTACGGCGGCAGTCTGCTTCTGTGTTGCCTTGTCTCTGGCAACCCTTTTTGCCTTATCTCTGGCAACCGGCTCTTCAATATCGGCTTCTCCGGCGGTTTCACCTCACAGAACTTCCCAAAATATGTCTTCATTTTTCCCTTCTCCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCTGCATCGGCACGGGGCTCTGGCGAGTTCGTGGGAAAGAGTGGGTCAAGTTATGTGAAGCTCAATCAGGGGGTCTCAGCATTTGGTCTGAGCATTTGTAGTTTGTTTAGTTTAAGAGTTTTTCTTCGTGTTTGA ATGGGATCGGCACAGTCCGTGCAATTAGCCGAGGAAAGAGAGGAGGACGAAGAGGAGGAAGAAGAAGACGATGAAGATGATGGTGATGATAATGTCGAGCCGGCCAGAGCTGAACTGGATAACTATTTGGTCAAGAAGGTTCTCGAGCAGGAGCCGGAGATGCTGCCTTGTCACGCATTAGCTTCGCCGTTGTCTCCTCAGCCGTCGTCACTTGGTACGCCTCGATTGGGGCCGGCGATCAAGGTTTGGGACCCGTATAATGTTCTGGCGCCACCGCCGCAGCTGCCTCCGCCGCCGTTGTTCACGCGGAGCTTCTCGTCCAGTTCGATTGACGACGATCGGGTGGTTATGGAGGTTTTTCTGATTAGCCATGGAGAGTGCGAGTTGAATTTGAGGTCGGACTTGGTCGGCGGGCGGTGCCCTGAGGCGGGTTTGACGCCGAAAGGCAAGCGGCAGGGGAGAGCGTTGGCGGTGTTCTTGAAATCTCAGGGGGTTCGTTTCAATGCCGTGTATTCGTCTCCCTTGGATCGGGCCCGATCCATGGCGGTTTCGGTTTGCCAGGAAATGAATTTTATGGAGGAACAAATACAAAATTCAGATGCCCTTACAGAGATGAGTCAGGGGCACTGGGAGCGTTGCCTTCGGTCTGAAATATATACACCTGAAACATTGAACTTCATTGATAGAATTCAACCCGACTTCTCTCCACCAGATGGAGAATCGCTTAGGCAGGTTGAATTCCGTATGGTTCATTTTCTTAATGGAACCATCTTGGAACTTCCCGAAAAGCTGAGGTCAGATGTTTTATCACACCGTCCCAATGAGACACTTCAAATGTCACACGAACTAACCAACTCAATTCACGATCGAGATGGGCATTCTCTCCCATCCCCACATTGGGATTTGCCTCATAGGCAGCGACACGGGATCACAAGGAGAAAGTCTGGCAAAAGCAGGCTACAAACTGTAACCACCACCGGAGAACATGAAGCTGAAGACGAGGTCTCCCCTCATGATGCCACTCACCAAAGTACACTAAATGATCTAAATATCAGGAACTCTTCCTCGTGTACGACTTGTATCGGCATCTTCACACATTCAATTCCAATTAAATGTCTCCTCGCAGGCCTCCTCGAATGCAGCTTGAAAGATCTCTCTGCATCAATGGCTACGGCGGCAGTCTGCTTCTGTGTTGCCTTGTCTCTGGCAACCCTTTTTGCCTTATCTCTGGCAACCGGCTCTTCAATATCGGCTTCTCCGGCGGTTTCACCTCACAGAACTTCCCAAAATATGTCTTCATTTTTCCCTTCTCCTGTTGATGAGCATTCTTCTCCCATTTCTGCAGATCCTGCATCGGCACGGGGCTCTGGCGAGTTCGTGGGAAAGAGTGGGTCAAGTTATGTGAAGCTCAATCAGGGGGTCTCAGCATTTGGTCTGAGCATTTGTAGTTTGTTTAGTTTAAGAGTTTTTCTTCGTGTTTGA MGSAQSVQLAEEREEDEEEEEEDDEDDGDDNVEPARAELDNYLVKKVLEQEPEMLPCHALASPLSPQPSSLGTPRLGPAIKVWDPYNVLAPPPQLPPPPLFTRSFSSSSIDDDRVVMEVFLISHGECELNLRSDLVGGRCPEAGLTPKGKRQGRALAVFLKSQGVRFNAVYSSPLDRARSMAVSVCQEMNFMEEQIQNSDALTEMSQGHWERCLRSEIYTPETLNFIDRIQPDFSPPDGESLRQVEFRMVHFLNGTILELPEKLRSDVLSHRPNETLQMSHELTNSIHDRDGHSLPSPHWDLPHRQRHGITRRKSGKSRLQTVTTTGEHEAEDEVSPHDATHQSTLNDLNIRNSSSCTTCIGIFTHSIPIKCLLAGLLECSLKDLSASMATAAVCFCVALSLATLFALSLATGSSISASPAVSPHRTSQNMSSFFPSPVDEHSSPISADPASARGSGEFVGKSGSSYVKLNQGVSAFGLSICSLFSLRVFLRV Homology
BLAST of Lsi05G004520 vs. ExPASy Swiss-Prot
Match: Q8L1Z7 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) OX=283166 GN=gpmA PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 7.5e-09 Identity = 42/131 (32.06%), Postives = 67/131 (51.15%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy Swiss-Prot
Match: P07953 (6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Rattus norvegicus OX=10116 GN=Pfkfb1 PE=1 SV=3) HSP 1 Score: 57.4 bits (137), Expect = 5.4e-07 Identity = 47/156 (30.13%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy Swiss-Prot
Match: P16118 (6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Homo sapiens OX=9606 GN=PFKFB1 PE=1 SV=3) HSP 1 Score: 55.8 bits (133), Expect = 1.6e-06 Identity = 46/156 (29.49%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy Swiss-Prot
Match: P49872 (6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Bos taurus OX=9913 GN=PFKFB1 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 2.0e-06 Identity = 47/156 (30.13%), Postives = 74/156 (47.44%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy Swiss-Prot
Match: P70266 (6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1 OS=Mus musculus OX=10090 GN=Pfkfb1 PE=1 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 2.7e-06 Identity = 46/156 (29.49%), Postives = 74/156 (47.44%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy TrEMBL
Match: A0A1S3BNZ5 (uncharacterized protein LOC103491727 OS=Cucumis melo OX=3656 GN=LOC103491727 PE=4 SV=1) HSP 1 Score: 715.7 bits (1846), Expect = 1.3e-202 Identity = 372/417 (89.21%), Postives = 385/417 (92.33%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy TrEMBL
Match: A0A6J1J699 (uncharacterized protein LOC111482146 OS=Cucurbita maxima OX=3661 GN=LOC111482146 PE=4 SV=1) HSP 1 Score: 683.3 bits (1762), Expect = 7.4e-193 Identity = 358/422 (84.83%), Postives = 375/422 (88.86%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy TrEMBL
Match: A0A6J1F368 (uncharacterized protein LOC111441774 OS=Cucurbita moschata OX=3662 GN=LOC111441774 PE=4 SV=1) HSP 1 Score: 679.9 bits (1753), Expect = 8.1e-192 Identity = 356/425 (83.76%), Postives = 375/425 (88.24%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy TrEMBL
Match: A0A5A7VFQ2 (Histidine phosphatase superfamily, clade-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00030 PE=4 SV=1) HSP 1 Score: 675.6 bits (1742), Expect = 1.5e-190 Identity = 342/384 (89.06%), Postives = 354/384 (92.19%), Query Frame = 0
BLAST of Lsi05G004520 vs. ExPASy TrEMBL
Match: A0A6J1JQY8 (uncharacterized protein LOC111486673 OS=Cucurbita maxima OX=3661 GN=LOC111486673 PE=4 SV=1) HSP 1 Score: 627.9 bits (1618), Expect = 3.7e-176 Identity = 338/417 (81.06%), Postives = 355/417 (85.13%), Query Frame = 0
BLAST of Lsi05G004520 vs. NCBI nr
Match: XP_038896091.1 (uncharacterized protein LOC120084344 isoform X2 [Benincasa hispida]) HSP 1 Score: 742.7 bits (1916), Expect = 2.1e-210 Identity = 387/417 (92.81%), Postives = 392/417 (94.00%), Query Frame = 0
BLAST of Lsi05G004520 vs. NCBI nr
Match: XP_038896090.1 (uncharacterized protein LOC120084344 isoform X1 [Benincasa hispida]) HSP 1 Score: 735.3 bits (1897), Expect = 3.4e-208 Identity = 387/425 (91.06%), Postives = 392/425 (92.24%), Query Frame = 0
BLAST of Lsi05G004520 vs. NCBI nr
Match: XP_008450011.1 (PREDICTED: uncharacterized protein LOC103491727 [Cucumis melo]) HSP 1 Score: 715.7 bits (1846), Expect = 2.8e-202 Identity = 372/417 (89.21%), Postives = 385/417 (92.33%), Query Frame = 0
BLAST of Lsi05G004520 vs. NCBI nr
Match: KAG7017865.1 (hypothetical protein SDJN02_19731, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 683.7 bits (1763), Expect = 1.2e-192 Identity = 359/425 (84.47%), Postives = 376/425 (88.47%), Query Frame = 0
BLAST of Lsi05G004520 vs. NCBI nr
Match: XP_022983585.1 (uncharacterized protein LOC111482146 [Cucurbita maxima]) HSP 1 Score: 683.3 bits (1762), Expect = 1.5e-192 Identity = 358/422 (84.83%), Postives = 375/422 (88.86%), Query Frame = 0
BLAST of Lsi05G004520 vs. TAIR 10
Match: AT3G26780.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 419.9 bits (1078), Expect = 2.9e-117 Identity = 238/385 (61.82%), Postives = 286/385 (74.29%), Query Frame = 0
BLAST of Lsi05G004520 vs. TAIR 10
Match: AT1G12850.1 (Phosphoglycerate mutase family protein ) HSP 1 Score: 416.4 bits (1069), Expect = 3.2e-116 Identity = 237/388 (61.08%), Postives = 278/388 (71.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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