Lsi05G001030 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G001030
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr05: 1771572 .. 1786465 (-)
RNA-Seq Expression	Lsi05G001030
Synteny	Lsi05G001030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCGTTAGAGTCCTCCAAAGTAGATATTCTTGAAGGCTCGCTCCCAACTCGCAGGTCACAACTTCTTCATCTTCCTGCGTAATTTTCTCTGCGGTTCTGCCGTCTACTACACTATCTCTGTTTCTTCAATCCTCTTCATCTTTCCCCTCCATACCAATTCCAAATCTTTCACTTCCCCTTCTTTATTAGCTTCCAATTCTTTGATTCCATCTTCCTCTCCTCCATGACCCAATACATTTAGCTCTTTCATCTTCCCTTTCATTTCTCCATTAATTACTTTCCCCCATGGCCGCCGCTGCTCTCAGGTCCAGGTCTTCCAAGGAAGTTGCCAACTTAACCCTTTCTCGTTGTAGACACTGTATATCCAATTCTATTCACGCTACTACCTACCCCAATTCCCACTGCACCAACCGTAACAAACCCAACGACCTCTTTCTCAACTCACCTTACCACTTGGTCTCTTTCAAGCCCGTTTCACTCAGAGGCGACTTCGTCGATAACGGGACTCAACCCCCCGATCATCGGAGGATTTACCAGAATTCTACCAAGAACTTGAATCACAAGTTGAGTAAGAGGGGTTGTTTTATGAGCACTTATGGGGACCCGCCGGAGGTATGGTCTGGAGATGGGATTGTGATTCGTGGGAGTAATTCAAGTTTGAATGGTCGTGGAGGCGGCGGTGGCAACTCCAATTCTGGTTCTGGTGGTGGGTTTTCCTCGAACTCCAATGATGAGTGTTGGGGTGGCTCTAGTTTGGGACCTAATTTTCCTACCCCGAAGGAAATCGCCAAGGGGCTTGATAAGTTTGTGATTGGTCAGGAGAGAGCTAAGAAGGTAAAAACTCGTTTGTGGCTGGACATTGTTGATTCATTCAGCTACATTCATTTTATTGTCTGAAGAAAGTGCTTTTTTGTTCCCCCTTTTGCAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGTATCTATCATGAATCTCTACAAAGGTTGTGAATTTGAATGTTAGATACTTCCTGTCTATTACGGATATTTTTCCTTTTGACTTAAGTTTAGGTGAGTTAGTAAGGGGTGGCTTTAGATGAGGTCAATGGTTTTACTTAGAAATTAGAACTCACAACTAGCGTATCTATTGTCCTAGTTTTCTTCATTACTTGTTCTGTGTGGTGAAGTTTGATTGAGATAATTAGGTGGCTAACATAATTGTTGAGCTCTTAAGGTAACTCCCCAAGCGCGCATGCACACACACACATTCTGATGCCTGTACTTGGATCATGGCATTTTTCTAGTCCAAAACCTGCATAGCCTAGTTTTACGGGTCTGCCTTGTTGGTATTGCTAAAAGAAAGGATACACTGATTTGAATGGTTGTATTGGGAACTGGAAACTTTGAGCTCAATGTCAAGTCAGGAATCCAGTTCCATCATAATTCTTCTAGAAGATGTGCTCTCTCCTTTTGAGCATCTATCTTGCATCTAACTTTTCAATATGTATAAAACGTTTGAGGTTTTTTTTTTCTTTTATAACGGGAAGATATCAAGAACCTTTATATGTTTTTTTTTGCTTGTTTGAACTAGGCCGACAGGAGATACAGTTAACAACAAAGCTGAAGCTGTCGATGATGATAAAGTGGAACTTGAGAAAAGTAACATCCTTCTGATGGGACCAACAGGCTCAGGTAATTACTATGAGTCCATTGTGCATTTCAATTCATGTTTGTAGTGTGTGATTATAATGAAGTTCAAGGATAGCCACAGCTTTTGAAATTTGATTTTTCATAACTGATAATTTCGAGTAAAGATCTATCCAAAGGCATTCATGAGCAATATTTTTCTTGAGATTTCCAATGTCAAGGGCCCTCTTCTTATGAACTGAATAGTGCCTTTTCTGCACACCAACCAAATATTGGCCTCATCCATCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGCGCTATTTAGGCATATTTTCCTGTTTAATTTATTATTAGAAGTTGCACTTTTCTGGAACAAGTAACCTTTGCTGTGTCATGGATATTCCTTTACATTTTCTGGTTGAAATTATAATGTTTTAGTTGGATACATTTTGTTGCTGTGTGTAGGCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAGCTTCTGATGGTATGTACCTGAGTACAGCTGGACTTTTCACTTCATATCCAATATATCAATTAATAATTATCTCTTTTTTTTTTGTTGTGCTCGTACGATTTATTGTGCAGCATATTTTTTTTCGTTTGGTGTAAATCATAAATGACAAAATTTATGTTTCTCAATACTTAGTTCAGTACCAATATTCTTCTATCTTATTTTTGCCCTCATTGTATTTAAATGTCAGGTTGCTGATTATAATGTGGCAGCTGCACAGCAGGGCATTGTTTACATTGATGAAGTTGATAAAATTACCAAGAAGGTTCTCCTTGGTTCTTCTATTCATCTCTCTCTTCCTCCTTCTATGGAAGGACTGGTGTGGATTTTCTTTACCTAATAACTTTGTTTCATTTTTATGAGCCAGGCAGAGAGCCTTAACATTAGCAGAGATGTGTCAGGAGAGGGCGTGCAGCAGGCATTATTAAAAATGCTAGAAGGAACGGTAAGTTTTGCATTTCATTGTAGGTGAAGTTCTATGATAATGTGCAGCATCCGCATGCGGTTTCAATGACTTCAGATGCATTGAAACCATTGAGATGGTGAGACTGAAAATCAGGAGTTCTTAACTTTGATTAGAGACCTAAAGAGAAAGAAAAAAGAAAAAACTTCGATTAGAGCCCTTCATTGTTTATATTTTTGGTTCTCTTGTTGTTTGTGGTGAGCTCATATGTGATATACATATATTTTTTTTTTCTGAACTAGATTGTCAACGTGCCTGAGAAGGGTGCACGAAAGCATCCCAGAGGTGAAAATATCCAGGTAGTGCCTTACCTGATACCTTTAAGAAATTTGCTTTCCTAGCAAGGATAAAAACAGAACACTGGGCTTCTAGATGTGTTTCTCTGCTTAGGAAATAAACATTTCTCTTTATTATAATGACATGAGCAAATAATTGGCTTGCATGTTTAATTACGCGATCATGATACTTACTTTCTGAAGTAGTTTTGACTTGGAAAATGCCAGAGGTCCTGGTGTCATACATAATCTTTATGAAATGCTTCTTCGCAGATTGATACTAAGGATATTCTTTTCATATGCGGGGGTGCCTTCATTGACTTGGAAAAAACAATCTCAGAAAGGTTATCTCCATGTAATAGCTACTTCAGTTTACTCCTCACAGCCCTAATTATTTACACAAGTTCTTAACTTGAGAGAAGTTTTTCCTCAATTCAGGCGCCAAGATTCTTCTTTAGGGTTTGGGGCCCCAGTTCGTGCAAACATGAGGGCAGGTGGTGTTACAGACGCCATGGTTACTTCTTCTCTGTTGGAGACCGTAAGTGCATGTCACTCTTCAGTTTATAAGTAACACTAACAACCCATGTTTTGTGGCCTTTTTTTTTTAAAATTTTAATTTTAATTTTTTTTAAAATTTATTTGTTTATTTTTTTAATCATTCTCTACTTGTTTTTCATTGAGGATTTATATTTTGGCAGGTTGAAAGTAGTGATCTCATTGCATATGGGTTGATACCCGAATTTGTTGGTCGATTCCCAATCCTTGTCAGTTTGTCAGCCTTAACAGAAAACCAACTTGTTCAGGTATATTTGTATTATGTTCTTCTTGTAATCATTTATTTTGCAAGATGCCTACTCACACATACTGCATGGCAAGTGCTAGCAGCACAAGTTGATTATAGTTTCAGTTTACATTATTTTAGCTGCACAAATTTATTGTAGTTTCAGTTCACATTCTCTTAATGTTATACTCGCAAGTTATGTGGAATAATATGCCTCTATTTTTGGAAAAGATCTGTTCTCTGATATTTGGTTAGTAAACTAACGTTTGTTCATATATAAGTTGATCATCTCTCTAAGCTCTCAAGTTTTATTGATGTTAATTGCTATGGATTTTATCTGTCCAACTTAGCATGGCTTTGAATACTGGCATTTGCAGGTCTTGACAGAGCCAAAAAATGCATTAGGAAAGCAGTATAGAAAGATGTTCCAAATGAATGATGTAAGTTATTTTGTGCTAGCTTTCTTCTTGGGTTCCAAGGGAAAACTGGAGCTTTTGTACCAGTAGAATCAATATATACACTGCTTCCTCCTATAACGTTGGAAGAGTTATTACTTCTGCTTGCTGACTTAAACACTAATATCTTGGGATAACGTGTCACCAGGTCAAGCTCCACTTCACAGAAAATGCCCTGAGATTAATTGCAAGAAAGGCAATGTCAAAGAACACTGGAGCACGGGGTTTGCGATCAATATTGGAGAATCTATTGATGGATTCTATGTATGAGGTATGTCGTTCCTTATTTCTCCATATGAACTGAAAGAATACAAGTGGCCGAAGAAAGGATAGCCTAATATGAATGATGCCAAAACAAAAACATAAGCTATAGATATGAAGAAGGGCTTCAATCAATGAGAATAAGATCTAAACGAAAATTACAAAAATTCTGAGGAACAGACCTTCTTTGAGGCATTGAACTTGGCCAAAGACCAAGCCTCCCCTAGAGCCTCTCAAAGCCTTTAAAATTTTCTTTCCAAAAGCTCCACCATGTCCAAAAGAAAAAGAAAAATTGCAGGTGAAATCAGAGCTCGTCCATCATGAAGAAACTCTTTTGGTTATGAACTAAACACACCCCAGAAGATCTTAAAACGCAATCTTAAATTGAAATTGTGTACTGTAGTTTCCAGAAGATATGATCGAATTCCTCATGAACGTTCTACAAAGTAGACAACACTTCAATCCCAACAATGTGTGGAAGAATGCCTATGGATTGGATCATTATTGTTAATTCTCTCCGGGAAGACCGGCTAAGAAGAAAAGTTTTACATTGTTGGGATTCTAATCTTCCATAGCAAGAAGAATAAAAGGTTAAATTGCAAATTTGGTCCCTATAGTTTGGAGAAAGTTAGAATTCACCCTATGGTTTTAAAAGTTAGAATTTAATTCCTATGGTTTGATAAAATCTCATAAATAGTCCCTATGGTTTGATAAAATCCTCATGAATAGTCCCTACCATAGGAACTATTTATGAAGGTTCTTTCAAACCATAAGGACTAAATTCTAATTATAAATCATAAGGACCAAATTCTAACTTTTCTTAAACCATAGGGACCAAATTTGTAATTTAACCAGAATAAAAAGTACCTTGAAAGGTTTGAAGGAAACCTTTCAGAAGAGTCGTGGTCTATGAATGGGGATACCCATGGTCCAAGGATGATAATGGAAACTGACCAAACAAAGAAAAGAGAGCTAAGAAATAAAAACTTTTTCTATTTGAAAAAGGAGGGGAAACGAGGAAACAAATAATATGGGGGACTATCACCCAGCCCAACCAATACTTAACCGAAGATTTATCAAATAAAATGGAAGGGAAGGAAGATGAGCTTGCTTCCAAGTAAAGGCAGTAATTCCAATGGGAGCCCTTTCCTTTAGGAGGGTTTCCTTTTCTGTATGCTCTTGTATTGTTTCATTCATTCTCAATAAAAGTTGTTTCAAAAGTAAAAGTAAAGGTAGTAATGCCTTTTGCCCCCACAAAATTAAAGACCCACCCAAAAGAAGTGAGCAAGTCACAGTAAGATTTTAGAAAAGCATTCGACTCCAAATAAGCAACCATTTTGGTAATAAGGCCAATAAGGAAGCCTCAAATTTCCCATGCCGAACCCACCCAATTCAATGGGTCTTTACACAAATCCCACCCTTGTTATGACTTCTACAGGAAGTTTCTCATAATCTTCTCAAAACCAACTTCTATCCTAGTGAAAAATGCCCCTTTCTAGGAATAAAGATGCTTTTGGAGTTTGGACGTTTTCCATAGGTCTCCATAATGATATCTGGTTGGAATTATGACCTAGGGGAAGCCTTAAATAAGTAGGAAAGTCCTCTACTTTACAATCTTTGGTAGACGCCTATCGAATCAAAACTGACCTTAACTTAACAAAAGAGAGAAAAGGAAAAAAAGACCTTCCGAGTAGAAAATTAAATTAGCAAAGATGAGACAGCTTTTAGAGGATAATGACACTGCAGAATAACAGTTGTGCATTGATCAGGGACGAAACAACAATTTCCTTTTTCTTTCTTTGGCAGCCATTAGTCACCTAAAAATAAGCTGCATTTACTTTGAGTCAACATGGTTCTGTTTTTCTACTGCACTAAGTCATTTGACAAATAATATCTGATGCTTTAACCTGTCATACCACCTGAATCTATTGCAGATTCCTGATGTTAGAACAGGTGAGGATATAATTGATGCTGTCATTGTTGATGAAGAATCCATTGGGTTAGACAGCCCTGGTTCTGGCACCAAAATTCTTTATGGAAAGGGTGCGTTGGATCGCTATCTTTCAGGACAAAAGGTAGAAGATAGAAAGGTCGAATCCAGCTATATAATCGTTATCAACCACATTAAGGTTATATATCCTTCTTGATAATCTAATAACGCTGCCGACTTCGCTTTGCAGGCAACAAGTCAGAATTCAGAAAGAGAGCCAGAACCTGAAGGTGAAACCGATCTTCCTTCAGTTGTTGCCAGCGGCATGTAACCAAGCATTTGTGGAAGTTTATGTATTATACCTGTAATGTTGTACATATTACTAGTCTACATTTATTAATAATTCAAATGGGAAATTATTGTCATACAGATTAACTGTTTCTCCAAAAAAAAGTGTTCTATCTTTCATTTTCAAAGTCCTGATACATTGAAAGCCCACATCTTCTAAAGCTTATAGGCAACAATGTATTTTGTCTCTGAAATTATTTCCAAGAGTTTTAGTTCAAAATCTTTTGAAATAGCTCTCAAGGACATTATATTTTATGTCCTGTGAATTTTACATCTCCACAGAAAACAAGAAAACGCATTAATGTTCCATAATGCAAGGTGGGGAAGGTAATTTTCACCTTACAAAGTGGAAGAAAAGGTGGGGGAAAGCTCGAATTTACTTGGTTATGAGTGCCCAATGATGCAGTTAACATTTGGGAACAATATCATCATTTTGTACCTTCACAAGTACCTTTTTTTTTAATAGTAATGCTCATTTTATTTGATGATATATATCTTATTTCATGAACTTCGCACTATTTGCAATTTTTTTTAACGGAAAACAATGAATGGAGAGAATATCATAGTACTATAAATGTTTATTGAAATTTTCCTATGTGTTTGTTGCTTTTCTTTTTGTTGCTTTGGAAGTAGCTGTTTCAACTTCAACTATTCGAATTTTTTATATATTTTTTTTTTTATTTCAATCCATGAATGATATCTTTTGAAAATTCTAGCTATTCTTAGTATGATATTGGACAATCTCATTGCTATTACTCAAATAAGCATCAAACTTATGCTTGCTTATTCGTCCATTAGTCAAATCGAATATGTAATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATGTGCAAGCATGATAACTTATATGATGTTCTATATTGCCATGAATCTAGGAACTTTTTATAGTATGAGATGTATTTTTGCCATGTGTTACTTCAAGTTTGATATTTCTCAAAATGAACTTGGCTCAACTGACATCAAACATGCACAATCAACTTAAGTCGAATATTTGATCTCTCCTCACCGTATTGCAAAAAAAACAAAGGGTAAATTGCAAAAACCACTCTTAAAGGATAGCGGTAGTTGCAATTACATCATCAAACTTTCAATTGCAAAAATTGAGCCCTCAAATTTATACAAGTATTAAAATTCTACCCTCAAACTTACCATAGTTATAGAAATTGGACCTCTAAAAGATACAAATTGAACCTTCAAACTTATACAATTGTTACAATTTCTATAATTATGTAAGTTTGAAGGTCCAATTTTAACACTTGTATAAATTTCAGAGCATAATTGCAACTACCACTATACTTTCAGATGATTTTTGTAATTGGCTAAAATTTTTTTTAGTATTTCCCTTTTCACCCCCCTAATGCTATAAGCTATATATGATTGTCTTTGTTATATAAACCAAACGTTTTGCAACCTCCTTATTTCTAGGGAATATTTGGCTCGTAGATTGAATTTTATATGCAGTTTTTTCTGTTTTTCTGGAAAAATATAATTTTTAGATAACACTTTTTGAGGTTCTTTCACTAGGTCGTACACTCATTAATGTAATTCATTAGTTGTCATTTATTCTTGGACAAATTAAATGAATTTGATTAATTGAGAATGATTGGTATATCTAAAATATTTAAGTTGATATGTACTTGTGGTATCAACTATAAACTTTTTGGTTAGTTGAATTAAACTCACGTTGGCTGGCACATAATTATTTTATATTACTAGTTTAAAACTTACAAACTCGAGTAACCGTGTTACAAAATTAAAGGTCAATTTTGACTAATATTTTTCAAGTCGTGTGCATATATATGTACTTATTATAAAGGTTGTTTTAAGCTCTCTATTGCAAATTTTAGAGAATATAGATAACTAAAATCTATGGACGCCCAATTTTTGAATTACAAATGTCTGACATATTTAGATAACTATGTTTGTTTTGCAAAAATATTTTTGTAGATATCTAGAAAACTTAGATATCTGTCTTTGTTTCGTAGGATTTCTACAAAACAAACATGGTTATCTAAAGATGTCATAATGCTCCAAAAGTTCTCTTACGACTATTCATTAATTATAATTAATTTAATATAATTTAAATTTATATACATATTGAAAAATTGTTATAAATGGAAAAAGTACCAAACTATTTACAAATATAGAAAAATTTCACTGTTGATCAGCAAGATTTCTTTCACTGAGCGATAAAAGTCTATTACAGTCTATCGCTGATAGATAGTGAAATTTTTCTATATTTATAAACATTTTGACTCATTTTTCTATATTTAAAAATAATCCTAACGTATTTGTTTTTATTAATTTGAATTTCTTTTTTAACATCTTTCTAAAATAAAAAACAACTACGATATAACAAAAAATAGTAAAATATATAGTTCACAATATTTATTTTAATTACAAAATGCAAACAAAGAAGAGTGATATTATATATAAAAAAAGAAAAAAATGAAGAATAAAAAAGTAAAAAGAGAATGCTCTTAATACGAAAACTTATAAAATTCATTTTTCAAGAAGCTATCTAAAATTCTGGATATGTCATCTGCAAAAACATCCTAGAATATCCAAAAATCTTCCAACGTCACTTCATAGGAATTTTAAATACTCATGAAATAAACTATCACATTATTTCTACAAATTAAACCCTTTTAATTTGTGGGCCAAGCACCCTAAAATTAATTTTTCTTAAATCAAAAGTAGAAAAAAAAACAATGATACATGCCATACATCCTAATTATCATAATCATAGATCTTAAATAGATATTATGAATTATGATGAGAAACAATTATAACAAAAGAAAAACAAAATCATTAAAATGCAAAGTTGCAATTACAAACAACTCTAAAAATAAAAATAAAAAAGACAAAAAAAAAAAAGGTAAAATGGATGAATGAATGAATGTAATTTGAATTTGAATGTGATAAAATCATAAAATAAGGTAAAAATATTAAATAAAATGAAGAAAAAAAGGAGATAAAAACACGTGGTGGGCTTTGTTAGTAATGAAACTGTGATGATCACATATCCCAAAGTTGTCTGCTTAACCAATCTTCTGGCCGTGAGATCCTCAATTTCACTCTTCCCATCGCCAAATCAACGGTGCCATTACTTGCTTTCTCTCTCTCTTCCCGTTCCTCTGTCTCTCTTTCACTTCAGAGACCTGGGAAAGAGAGGAACAACACAGGGGGGGAAGAGAGACGAACAAAAGAACCTCATCTTTCCGCTAAAAAAGCCTTCTTGATCTACCCCTTTTTCTCTTCTTTGCCTTCTTTACGATTTCCAGGTGGGAATTTGCACCAACTGGTGAAATTTTCAAGTGGGGTAACCCTTAAATTTGTTTTTGAGATCTTGATCGATTCTTTGCTTTGGATTAGTGGGTTTCTCTTCAGTTGTGCAGATTTTGTGTTGTTGTTAATGGATTTGGATAGTATTGAGTGTGTATCATCTTCTGATGGTCTCGATGAAGATGAGATTCATCTTCATCACACTCTTCATCCTTATTCCCATTCTCATCATCATCCAGAGTTGTCAGCGACGAAGCCTCGTAATGGGAGCAATAATAGCGGTATAGCAGTCCCCACTGCGACTGCACCCGCCACTAGCGTCCATGAATTGCTTGAGTGCCCTGTCTGTACCAATTCTATGTACCCTCCCATCCATCAGGTTTGTCTTACGGATTGAAGGTTAATTTTGATAAATGTTGAAGGTTGCCCTAGTTACTTACAGAATGGGGAGGGGGCTGATTTGATTTTAGATTTCTAGGGTGGGGGAAGGGTCTTTTTTTATGAGATAATTTCCTTTGATTTATCTTTTCCCTGCTGGGTTTTTGTTTTTATATAAGTTTGATCATTCAGTGTTTGCTGGAAGTTTGGGGACGTGAATTGTTTTGGATGGATGTGTGAAATGGGAACTTGTTATTGAGTGCTAAAAGTGTGAGATGCAAAGTCTAGAACTAGATTATATTGAAATATAGCAAATCTTTGGTTTGATGTATGTTGTATCATATTGTAACCATAAAGCATTAGCCATCATATCTCTTTTACTTCTTAAGGTTTCTAACACTAGGCTATATAATCAAGAGATTATTACTTGTCCTATTTTTGCTTGAAAGCCTTTGTTTTAGCATAAGATGCTGTTTGTTTTAAACTACTCTGTAAGGAGGTTTTTTGGGTTTTGTTATAAACATGATTTTAACTGGCTGATGAAACTTTAGTTTCCTATTGCTTTCTTAGAATACCATTTCCCGCCATTGCAGTTATCTTTATCTTTCTTCCTGTATCATTGGCAGCATTCAGTCTATTTGTACAGATTTGGTTTAGGGGTCTAGAAATGTATTGAATCGATTTTTTTTAATGAATAGATCCGATCGTAACTTGGAATATGGAATTCAAAGGATCAAATAGGAAATGATACTCTGAATCATAGAACTATAATGAAATATACGATCAACCAACATTTATCAAATTTGAAAAAGGGTCCGAAGAAATGGTTCGAGGAGTTGGTACCATCAGGATGATGATAGCTGTTAAGATTTAAGAAGATGCTTGTTTTATTCCAATATTATCTTAAAACATTTAATACTTTTGATAAGATGTATATTTGGTTGTTGATATATATCTAATGATTGTATGTAAGTGAGGGTTAACTGTATGACCGACTAAAATGGTGCAGTGCCACAATGGACATACCTTATGTTCTACATGTAAAACACGGGTTCATAATCGTTGCCCTACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTAGCACTGGAGAAGGTGGCAGAGTCACTTGAATTGCCTTGCAAGTATTATTCATTGGGTTGCACTGAGATATTCCCATACTACAGTAAACTTAAGCATGAGGCTTTGTGCAACTACAGACCCTATAGTTGCCCATATGCTGGGTCGGAATGCGCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTGAGGGATGATCATAAGGTGGATATGCACACAGGCTGCACATTTAACCATCGCTATGTTAAATCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTCACTGTAAGTCTGATGTATTTGACCTTAATTCTTATGTGATTTTCTTTCTTGTTGGTAGAACTTGTTTTATCAGACATGAATTACACATCTTACATATGATATAAATACAAATTCATGTGAGCATATGTCACGTGTGCATTTGTATCTATGAAGACTAGGATTACAGACCCAATTAAGCCACCAGGGAGATTAGAATAAGATCCTACTGGTCGTCAACAACAGATGTATGATGAAAAAAATCATTGATATTAGATGGCCTGCTACAAGTTTTAAGTTTTATAAACCATTGAAGATGCTTCTTAAGTTTTTCTGATGGCATGAAATGGTTATTTCTGAAAGTCAGTGACATGTTTGGTAATCAATCATTTTCTTTTATTTTATATAACTCGTGACCTTAACTGATTAACTATTTGCCTTTTTCCAGTGGCAAATGGATGTGATGCAATGAAATAAAGTTTGGTTGAAATATCAAGGGATCAAGAGAACCCCTTTTATTTAATATTTTCAATTTCCTTTTCTGCAAGTGAAGGACTTGTGCTTTCACGACTTGAAATTTTTTCTTAAAGTTTATTGTCTTTTCCGTTCCATTGATAGATTGGTCACTGGACGCTGAACTACTACCTATAAATGGCCTGTTTTGTGTATAATCAAATGACTTCACGCTGAGAGGTTCTGCTGGACATTCATTGGGTTTACTCCAAATTTTAGTTTGATCCTGTTTCTTGTTTGCTCTGTTACATTTTGCAGGTGTTCCATTGTTTTGGTCAATATTTCTGCCTTCACTTTGAAGCCTTTCAGCTTGGCATGGCTCCAGTCTATATGGCTTTCCTTCGTTTCATGGGTGATGAGAATGAGGCCCGAACATACAGCTACAGTCTTGAGGTTGGTGGATACGGGCGAAAATTAATATGGGAGGGCACCCCGCGAAGTATCAGAGATAGTCATCGAAAAGTGAGGGACAGCCATGATGGGCTAATCATTCAAAGAAATATGGCTCTTTTCTTCTCTGGTGGAGACAGGAAGGAACTGAAACTAAGAGTTACAGGAAGGATATGGAAGGAACAAAACCCAGATGCTGGAGTCTGCATACCGAACCTGTGTAGCTAAGACAAGTATTCTCGTTCTCAAGGGCCTACGTCGGTTTTGTGTGTTGAGCTACTGTGCTTTGTACCTATTCTCTCTTGCCTTTCCTGGTATATTGTAAGGGATGATTTGTTAAATAGTTGTCATATTGGTAATTATTAATCTTCCAAAGAAGGATGTTTTCTGAAGTTGTAATGAATGTTTGCTTTGCAACTCTATAGAGAAGTGGAATATCAACGCAATTGCCTTGTGCAGATTCTTCCCAACTTCCTTCTGAACAACTTTGATTACAGTAAAAGAAAAAAACCAACTGCTCTACCACTA

mRNA sequence

TTTCGTTAGAGTCCTCCAAAGTAGATATTCTTGAAGGCTCGCTCCCAACTCGCAGGTCACAACTTCTTCATCTTCCTGCGTAATTTTCTCTGCGGTTCTGCCGTCTACTACACTATCTCTGTTTCTTCAATCCTCTTCATCTTTCCCCTCCATACCAATTCCAAATCTTTCACTTCCCCTTCTTTATTAGCTTCCAATTCTTTGATTCCATCTTCCTCTCCTCCATGACCCAATACATTTAGCTCTTTCATCTTCCCTTTCATTTCTCCATTAATTACTTTCCCCCATGGCCGCCGCTGCTCTCAGGTCCAGGTCTTCCAAGGAAGTTGCCAACTTAACCCTTTCTCGTTGTAGACACTGTATATCCAATTCTATTCACGCTACTACCTACCCCAATTCCCACTGCACCAACCGTAACAAACCCAACGACCTCTTTCTCAACTCACCTTACCACTTGGTCTCTTTCAAGCCCGTTTCACTCAGAGGCGACTTCGTCGATAACGGGACTCAACCCCCCGATCATCGGAGGATTTACCAGAATTCTACCAAGAACTTGAATCACAAGTTGAGTAAGAGGGGTTGTTTTATGAGCACTTATGGGGACCCGCCGGAGGTATGGTCTGGAGATGGGATTGTGATTCGTGGGAGTAATTCAAGTTTGAATGGTCGTGGAGGCGGCGGTGGCAACTCCAATTCTGGTTCTGGTGGTGGGTTTTCCTCGAACTCCAATGATGAGTGTTGGGGTGGCTCTAGTTTGGGACCTAATTTTCCTACCCCGAAGGAAATCGCCAAGGGGCTTGATAAGTTTGTGATTGGTCAGGAGAGAGCTAAGAAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGTATCTATCATGAATCTCTACAAAGGCCGACAGGAGATACAGTTAACAACAAAGCTGAAGCTGTCGATGATGATAAAGTGGAACTTGAGAAAAGTAACATCCTTCTGATGGGACCAACAGGCTCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAGCTTCTGATGGTTGCTGATTATAATGTGGCAGCTGCACAGCAGGGCATTGTTTACATTGATGAAGTTGATAAAATTACCAAGAAGGCAGAGAGCCTTAACATTAGCAGAGATGTGTCAGGAGAGGGCGTGCAGCAGGCATTATTAAAAATGCTAGAAGGAACGATTGTCAACGTGCCTGAGAAGGGTGCACGAAAGCATCCCAGAGGTGAAAATATCCAGATTGATACTAAGGATATTCTTTTCATATGCGGGGGTGCCTTCATTGACTTGGAAAAAACAATCTCAGAAAGGCGCCAAGATTCTTCTTTAGGGTTTGGGGCCCCAGTTCGTGCAAACATGAGGGCAGGTGGTGTTACAGACGCCATGGTTACTTCTTCTCTGTTGGAGACCGTTGAAAGTAGTGATCTCATTGCATATGGGTTGATACCCGAATTTGTTGGTCGATTCCCAATCCTTGTCAGTTTGTCAGCCTTAACAGAAAACCAACTTGTTCAGGTCTTGACAGAGCCAAAAAATGCATTAGGAAAGCAGTATAGAAAGATGTTCCAAATGAATGATATTCCTGATGTTAGAACAGGTGAGGATATAATTGATGCTGTCATTGTTGATGAAGAATCCATTGGGTTAGACAGCCCTGGTTCTGGCACCAAAATTCTTTATGGAAAGGGTGCGTTGGATCGCTATCTTTCAGGACAAAAGGCAACAAGTCAGAATTCAGAAAGAGAGCCAGAACCTGAAGGTGAAACCGATCTTCCTTCAGTTGTTGCCAGCGGCATTATTGAGTGTGTATCATCTTCTGATGGTCTCGATGAAGATGAGATTCATCTTCATCACACTCTTCATCCTTATTCCCATTCTCATCATCATCCAGAGTTGTCAGCGACGAAGCCTCGTAATGGGAGCAATAATAGCGGTATAGCAGTCCCCACTGCGACTGCACCCGCCACTAGCGTCCATGAATTGCTTGAGTGCCCTGTCTGTACCAATTCTATGTACCCTCCCATCCATCAGTGCCACAATGGACATACCTTATGTTCTACATGTAAAACACGGGTTCATAATCGTTGCCCTACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTAGCACTGGAGAAGGTGGCAGAGTCACTTGAATTGCCTTGCAAGTATTATTCATTGGGTTGCACTGAGATATTCCCATACTACAGTAAACTTAAGCATGAGGCTTTGTGCAACTACAGACCCTATAGTTGCCCATATGCTGGGTCGGAATGCGCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTGAGGGATGATCATAAGGTGGATATGCACACAGGCTGCACATTTAACCATCGCTATGTTAAATCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTCACTGTGTTCCATTGTTTTGGTCAATATTTCTGCCTTCACTTTGAAGCCTTTCAGCTTGGCATGGCTCCAGTCTATATGGCTTTCCTTCGTTTCATGGGTGATGAGAATGAGGCCCGAACATACAGCTACAGTCTTGAGGTTGGTGGATACGGGCGAAAATTAATATGGGAGGGCACCCCGCGAAGTATCAGAGATAGTCATCGAAAAGTGAGGGACAGCCATGATGGGCTAATCATTCAAAGAAATATGGCTCTTTTCTTCTCTGGTGGAGACAGGAAGGAACTGAAACTAAGAGTTACAGGAAGGATATGGAAGGAACAAAACCCAGATGCTGGAGTCTGCATACCGAACCTGTGTAGCTAAGACAAGTATTCTCGTTCTCAAGGGCCTACGTCGGTTTTGTGTGTTGAGCTACTGTGCTTTGTACCTATTCTCTCTTGCCTTTCCTGGTATATTGTAAGGGATGATTTGTTAAATAGTTGTCATATTGGTAATTATTAATCTTCCAAAGAAGGATGTTTTCTGAAGTTGTAATGAATGTTTGCTTTGCAACTCTATAGAGAAGTGGAATATCAACGCAATTGCCTTGTGCAGATTCTTCCCAACTTCCTTCTGAACAACTTTGATTACAGTAAAAGAAAAAAACCAACTGCTCTACCACTA

Coding sequence (CDS)

ATGGCCGCCGCTGCTCTCAGGTCCAGGTCTTCCAAGGAAGTTGCCAACTTAACCCTTTCTCGTTGTAGACACTGTATATCCAATTCTATTCACGCTACTACCTACCCCAATTCCCACTGCACCAACCGTAACAAACCCAACGACCTCTTTCTCAACTCACCTTACCACTTGGTCTCTTTCAAGCCCGTTTCACTCAGAGGCGACTTCGTCGATAACGGGACTCAACCCCCCGATCATCGGAGGATTTACCAGAATTCTACCAAGAACTTGAATCACAAGTTGAGTAAGAGGGGTTGTTTTATGAGCACTTATGGGGACCCGCCGGAGGTATGGTCTGGAGATGGGATTGTGATTCGTGGGAGTAATTCAAGTTTGAATGGTCGTGGAGGCGGCGGTGGCAACTCCAATTCTGGTTCTGGTGGTGGGTTTTCCTCGAACTCCAATGATGAGTGTTGGGGTGGCTCTAGTTTGGGACCTAATTTTCCTACCCCGAAGGAAATCGCCAAGGGGCTTGATAAGTTTGTGATTGGTCAGGAGAGAGCTAAGAAGGTGCTCTCTGTGGGTGTTTACAATCACTACAAGCGTATCTATCATGAATCTCTACAAAGGCCGACAGGAGATACAGTTAACAACAAAGCTGAAGCTGTCGATGATGATAAAGTGGAACTTGAGAAAAGTAACATCCTTCTGATGGGACCAACAGGCTCAGGATATGTTGGAGAAGATGTGGAGTCTATATTATACAAGCTTCTGATGGTTGCTGATTATAATGTGGCAGCTGCACAGCAGGGCATTGTTTACATTGATGAAGTTGATAAAATTACCAAGAAGGCAGAGAGCCTTAACATTAGCAGAGATGTGTCAGGAGAGGGCGTGCAGCAGGCATTATTAAAAATGCTAGAAGGAACGATTGTCAACGTGCCTGAGAAGGGTGCACGAAAGCATCCCAGAGGTGAAAATATCCAGATTGATACTAAGGATATTCTTTTCATATGCGGGGGTGCCTTCATTGACTTGGAAAAAACAATCTCAGAAAGGCGCCAAGATTCTTCTTTAGGGTTTGGGGCCCCAGTTCGTGCAAACATGAGGGCAGGTGGTGTTACAGACGCCATGGTTACTTCTTCTCTGTTGGAGACCGTTGAAAGTAGTGATCTCATTGCATATGGGTTGATACCCGAATTTGTTGGTCGATTCCCAATCCTTGTCAGTTTGTCAGCCTTAACAGAAAACCAACTTGTTCAGGTCTTGACAGAGCCAAAAAATGCATTAGGAAAGCAGTATAGAAAGATGTTCCAAATGAATGATATTCCTGATGTTAGAACAGGTGAGGATATAATTGATGCTGTCATTGTTGATGAAGAATCCATTGGGTTAGACAGCCCTGGTTCTGGCACCAAAATTCTTTATGGAAAGGGTGCGTTGGATCGCTATCTTTCAGGACAAAAGGCAACAAGTCAGAATTCAGAAAGAGAGCCAGAACCTGAAGGTGAAACCGATCTTCCTTCAGTTGTTGCCAGCGGCATTATTGAGTGTGTATCATCTTCTGATGGTCTCGATGAAGATGAGATTCATCTTCATCACACTCTTCATCCTTATTCCCATTCTCATCATCATCCAGAGTTGTCAGCGACGAAGCCTCGTAATGGGAGCAATAATAGCGGTATAGCAGTCCCCACTGCGACTGCACCCGCCACTAGCGTCCATGAATTGCTTGAGTGCCCTGTCTGTACCAATTCTATGTACCCTCCCATCCATCAGTGCCACAATGGACATACCTTATGTTCTACATGTAAAACACGGGTTCATAATCGTTGCCCTACTTGTAGACAAGAGCTTGGAGATATTAGGTGCTTAGCACTGGAGAAGGTGGCAGAGTCACTTGAATTGCCTTGCAAGTATTATTCATTGGGTTGCACTGAGATATTCCCATACTACAGTAAACTTAAGCATGAGGCTTTGTGCAACTACAGACCCTATAGTTGCCCATATGCTGGGTCGGAATGCGCTGCTGTTGGGGACATTCCTTTCCTTGTTGCCCATCTGAGGGATGATCATAAGGTGGATATGCACACAGGCTGCACATTTAACCATCGCTATGTTAAATCCAATCCAAGGGAAGTGGAGAATGCCACTTGGATGCTCACTGTGTTCCATTGTTTTGGTCAATATTTCTGCCTTCACTTTGAAGCCTTTCAGCTTGGCATGGCTCCAGTCTATATGGCTTTCCTTCGTTTCATGGGTGATGAGAATGAGGCCCGAACATACAGCTACAGTCTTGAGGTTGGTGGATACGGGCGAAAATTAATATGGGAGGGCACCCCGCGAAGTATCAGAGATAGTCATCGAAAAGTGAGGGACAGCCATGATGGGCTAATCATTCAAAGAAATATGGCTCTTTTCTTCTCTGGTGGAGACAGGAAGGAACTGAAACTAAGAGTTACAGGAAGGATATGGAAGGAACAAAACCCAGATGCTGGAGTCTGCATACCGAACCTGTGTAGCTAA

Protein sequence

MAAAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKPVSLRGDFVDNGTQPPDHRRIYQNSTKNLNHKLSKRGCFMSTYGDPPEVWSGDGIVIRGSNSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFVIGQERAKKVLSVGVYNHYKRIYHESLQRPTGDTVNNKAEAVDDDKVELEKSNILLMGPTGSGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMNDIPDVRTGEDIIDAVIVDEESIGLDSPGSGTKILYGKGALDRYLSGQKATSQNSEREPEPEGETDLPSVVASGIIECVSSSDGLDEDEIHLHHTLHPYSHSHHHPELSATKPRNGSNNSGIAVPTATAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQNPDAGVCIPNLCS

Homology

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BLAST of Lsi05G001030 vs. ExPASy Swiss-Prot
Match: Q9FK07 (CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=CLPX1 PE=2 SV=1)

HSP 1 Score: 586.6 bits (1511), Expect = 4.3e-166
Identity = 361/592 (60.98%), Postives = 409/592 (69.09%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNS--HCTNRNKPNDLFLNSPYHLVSF 62
           AAALRS +S+E A+LTLS  R+ I N IH      S  HC +R+K ++ F   PY     
Sbjct: 2   AAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKF---PY----- 61

Query: 63  KPVSLRGDFVDNGTQPPDHRRIYQNSTK--NLNHKLSKRG---CFMSTYGDPPEVWS--G 122
           K  SL   F+DN  +    RR   NSTK      KLS  G     +S+ GDPP++W   G
Sbjct: 62  KISSLGTSFLDN--RGGGERR---NSTKCYAAQKKLSGVGSSVVILSSQGDPPDLWQPPG 121

Query: 123 DGIVIRGSNSSLN-GRGGGGGNSN-SGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGL 182
           DG+ +R + SS+N GRGGGGG S+  G G G  SNS ++CWGGS+LG +FPTPKEI KGL
Sbjct: 122 DGVSVRVNGSSVNLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGL 181

Query: 183 DKFVIGQERAKKVLSVGVYNHYKRIYHESLQ-RPTGDTVNNKAEAVDDDKVELEKSNILL 242
           +KFVIGQERAKKVLSV VYNHYKRIYHES Q R  G+T +  A+  DDD VELEKSNILL
Sbjct: 182 NKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILL 241

Query: 243 MGPTGS----------------------------GYVGEDVESILYKLLMVADYNVAAAQ 302
           MGPTGS                            GYVGEDVESILYKLL VADYNVAAAQ
Sbjct: 242 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQ 301

Query: 303 QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQ 362
           QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+NIQ
Sbjct: 302 QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 361

Query: 363 IDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVES 422
           IDTKDILFICGGAF+D+EKTISERR DSS+GFGAPVRANMRAGGVT+A V S+L+ETVES
Sbjct: 362 IDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVES 421

Query: 423 SDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN-------- 482
           SDLIAYGLIPEFVGRFP+LVSLSALTENQL+QVLTEPKNALGKQY+KM+QMN        
Sbjct: 422 SDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTE 481

Query: 483 ---------------------------------DIPDVRTGEDIIDAVIVDEESI-GLDS 507
                                            +IPD  TG D+I+AV+VDEE++ G   
Sbjct: 482 SALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGR 541

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BLAST of Lsi05G001030 vs. ExPASy Swiss-Prot
Match: Q84JL3 (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=1 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 6.2e-157
Identity = 261/327 (79.82%), Postives = 275/327 (84.10%), Query Frame = 0


Query: 509 IECVSSSDGLDEDEIHLHHTLHPYSHSHHHPELSATKPRNGSNNSGIAVPTATAPATSVH 568
           ++C S+ D  D++EIH     +     HHH         N + N   A        TSVH
Sbjct: 6   MDCTSTMDVTDDEEIHQDRHSYASVSKHHH-------TNNNTTNVNAAASGLLPTTTSVH 65

Query: 569 ELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLE 628
           ELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLE
Sbjct: 66  ELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLE 125

Query: 629 LPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVD 688
           LPCK+ SLGC EIFPYYSKLKHE +CN+RPYSCPYAGSEC+  GDIPFLVAHLRDDHKVD
Sbjct: 126 LPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVD 185

Query: 689 MHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 748
           MH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD
Sbjct: 186 MHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 245

Query: 749 ENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKE 808
           E EAR Y+YSLEVGGYGRKLIWEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFSGGDRKE
Sbjct: 246 ETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKE 305

Query: 809 LKLRVTGRIWKEQNPD---AGVCIPNL 833
           LKLRVTGRIWKEQ       G CIPNL
Sbjct: 306 LKLRVTGRIWKEQQQSGEGGGACIPNL 325

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BLAST of Lsi05G001030 vs. ExPASy Swiss-Prot
Match: Q9STN8 (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=1 SV=1)

HSP 1 Score: 553.1 bits (1424), Expect = 5.3e-156
Identity = 263/331 (79.46%), Postives = 285/331 (86.10%), Query Frame = 0


Query: 509 IECVSSSDGLDEDEIHLHHTLHPYSHSHHHPELSATKPRNGSNNSGIAV----PTATAPA 568
           +ECVSS+           + +H   + H   + S+TK   G+  + +      PTATAPA
Sbjct: 6   MECVSSTG----------NEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPA 65

Query: 569 TSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVA 628
           TSV+ELLECPVCT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVA
Sbjct: 66  TSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVA 125

Query: 629 ESLELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDD 688
           ESLELPCK+Y+LGC EIFPYYSKLKHE+LCN+RPYSCPYAGSEC  VGDIPFLVAHLRDD
Sbjct: 126 ESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDD 185

Query: 689 HKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 748
           HKVDMH G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLR
Sbjct: 186 HKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLR 245

Query: 749 FMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 808
           FMGDE +AR+YSYSLEVGG GRKL WEGTPRSIRDSHRKVRDS+DGLIIQRNMALFFSGG
Sbjct: 246 FMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGG 305

Query: 809 DRKELKLRVTGRIWKEQ-NPDAGVCIPNLCS 835
           DRKELKLRVTG+IWKEQ +PD+G+ IPNL S
Sbjct: 306 DRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326

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BLAST of Lsi05G001030 vs. ExPASy Swiss-Prot
Match: Q8S3N1 (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=1 SV=2)

HSP 1 Score: 552.7 bits (1423), Expect = 6.9e-156
Identity = 261/327 (79.82%), Postives = 282/327 (86.24%), Query Frame = 0


Query: 509 IECVSSSDGLDEDEIHLHHTLHPYSHSHHHPELSATKPRNGSNNSGIAVPTATAPATSVH 568
           +E  S    +D+DEIH  H            + S+TK + G+           +PATSV+
Sbjct: 1   METDSIDSVIDDDEIHQKH------------QFSSTKSQGGAT-------VVISPATSVY 60

Query: 569 ELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLE 628
           ELLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLE
Sbjct: 61  ELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLE 120

Query: 629 LPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVD 688
           LPCKYY+LGC  IFPYYSKLKHE+ CN+RPYSCPYAGSECAAVGDI FLVAHLRDDHKVD
Sbjct: 121 LPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAHLRDDHKVD 180

Query: 689 MHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 748
           MHTGCTFNHRYVKSNPREVENATWMLTVF CFGQYFCLHFEAFQLGMAPVYMAFLRFMGD
Sbjct: 181 MHTGCTFNHRYVKSNPREVENATWMLTVFQCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 240

Query: 749 ENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKE 808
           E++AR Y+YSLEVGG GRK  WEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFSGGD+KE
Sbjct: 241 EDDARNYTYSLEVGGSGRKQTWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDKKE 300

Query: 809 LKLRVTGRIWKE-QNPDAGVCIPNLCS 835
           LKLRVTGRIWKE QNPD+GVCI ++CS
Sbjct: 301 LKLRVTGRIWKEQQNPDSGVCITSMCS 308

[Close]

BLAST of Lsi05G001030 vs. ExPASy Swiss-Prot
Match: Q10L91 (E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS1 PE=1 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 4.3e-134
Identity = 220/273 (80.59%), Postives = 239/273 (87.55%), Query Frame = 0


Query: 553 SGIAVPTATAP----ATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTC 612
           +G  VP +  P    ++SV ELLECPVC ++MYPPIHQC NGHTLCS CK RVHNRCPTC
Sbjct: 29  AGDPVPHSPKPNVVVSSSVRELLECPVCLSAMYPPIHQCSNGHTLCSGCKPRVHNRCPTC 88

Query: 613 RQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSEC 672
           R ELG+IRCLALEKVA SLELPCKY + GC  I+PYY KLKHE+ C YRPYSCPYAGSEC
Sbjct: 89  RHELGNIRCLALEKVAASLELPCKYQNFGCVGIYPYYCKLKHESQCQYRPYSCPYAGSEC 148

Query: 673 AAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHF 732
              GDIP+LV HL+DDHKVDMH GCTFNHRYVKSNP EVENATWMLTVF CFGQYFCLHF
Sbjct: 149 TVAGDIPYLVNHLKDDHKVDMHNGCTFNHRYVKSNPHEVENATWMLTVFSCFGQYFCLHF 208

Query: 733 EAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSH 792
           EAFQLGMAPVY+AFLRFMGD+ EA+ YSYSLEVGG GRK+IW+G PRSIRDSHRKVRDS+
Sbjct: 209 EAFQLGMAPVYIAFLRFMGDDLEAKNYSYSLEVGGTGRKMIWQGVPRSIRDSHRKVRDSY 268

Query: 793 DGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ 822
           DGLIIQRNMALFFSGG+RKELKLRVTGRIWKEQ
Sbjct: 269 DGLIIQRNMALFFSGGERKELKLRVTGRIWKEQ 301

[Close]

BLAST of Lsi05G001030 vs. ExPASy TrEMBL
Match: A0A498KM86 (RING-type E3 ubiquitin transferase OS=Malus domestica OX=3750 GN=DVH24_022425 PE=3 SV=1)

HSP 1 Score: 1279.2 bits (3309), Expect = 0.0e+00
Identity = 676/926 (73.00%), Postives = 737/926 (79.59%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
           AAALRS+ S++ A+  +S+ R+ + N +HA    +SH  +R K +DLF+N+PYH  SFKP
Sbjct: 2   AAALRSKPSRDTASSAVSQFRYFVFNYMHAGRVASSHHAHRTKSDDLFMNTPYHFTSFKP 61

Query: 63  VSLRGDFVDNGTQ----PPDHRRIYQNSTKNLNHKLSKRGC--FMSTYGDPPEVWSGDGI 122
           V   G+FV+ G+Q    P   +R+ +NS KN   KLS   C   +S+ GDPPEVWSGDGI
Sbjct: 62  VLPGGNFVEKGSQIFNHPRASQRVSKNSDKNWGRKLSSSRCNTVVSSQGDPPEVWSGDGI 121

Query: 123 VIR-GSNSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFV 182
           V+R    S+L   GGGGG  + GSGGGF SNS DE WGGS+LG NFPTPKEI +GLD FV
Sbjct: 122 VVRTAPGSNLVRGGGGGGGPSPGSGGGFDSNSKDENWGGSNLGNNFPTPKEICQGLDTFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+  TGD+ N K +A+DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEKAKKVLSVAVYNHYKRIYHESLQKWSTGDSSNGKVDAMDDDRVELEKSNILLMGPT 241

Query: 243 GS----------------------------GYVGEDVESILYKLLMVADYNVAAAQQGIV 302
           GS                            GYVGEDVESILYKLL VADYNV AAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVTAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTDA VTSSLLE VESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLEIVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN------------ 482
            YGLIPEFVGRFPILVSLSALTENQLV+VLTEPKNALGKQY+KMF+MN            
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 -----------------------------DIPDVRTGEDIIDAVIVDEESIGLDSPGSGT 542
                                        +IP+VRTG+DIIDAV++DEE++GLD  G G 
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPEVRTGDDIIDAVVIDEEAVGLDGKGCGA 541

Query: 543 KILYGKGALDRYLSGQK------ATSQNSEREPEPEGETDLPSVVAS-------GIIECV 602
           KILYGKGALDRY S  K      AT++ S  + EPE ET+L SVVAS         IECV
Sbjct: 542 KILYGKGALDRYHSQNKAKDAEIATTEGS--DGEPEAETELSSVVASMGRAMDLESIECV 601

Query: 603 SSSDGLDEDEIHLHH-TLHPYSHSH-HHPELSATKPR-NGSNNSGIAVPTATAPATSVHE 662
           SSSDGLDEDEIH HH TLHP+ H H HH E S  KPR N + N+ I  PTA APATSVHE
Sbjct: 602 SSSDGLDEDEIHPHHNTLHPHPHPHQHHHEFS--KPRSNVTTNATINGPTAIAPATSVHE 661

Query: 663 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL 722
           LLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLEL
Sbjct: 662 LLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLEL 721

Query: 723 PCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDM 782
           PCKYY+LGC EIFPYYSKLKHE++CN+RPY+CPYAGSEC+ VGDIPFLVAHLRDDHKVDM
Sbjct: 722 PCKYYALGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVDM 781

Query: 783 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 835
           HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 782 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 841

[Close]

BLAST of Lsi05G001030 vs. ExPASy TrEMBL
Match: A0A5N5FBZ9 (RING-type E3 ubiquitin transferase OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_001692 PE=3 SV=1)

HSP 1 Score: 1275.0 bits (3298), Expect = 0.0e+00
Identity = 673/924 (72.84%), Postives = 730/924 (79.00%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
           AAALRS+ S++ A+  +S+ R+ + N +HA+   +SH  +R K  DLF+N+PYH  SF P
Sbjct: 2   AAALRSKPSRDTASSAVSQFRYFVFNYMHASRVASSHYAHRTKSEDLFMNTPYHFTSFNP 61

Query: 63  VSLRGDFVDNGTQ----PPDHRRIYQNSTKNLNHKLSKRGC--FMSTYGDPPEVWSGDGI 122
           V L G FV+ G+Q    P   +R+ +NS KN   KLS   C   +S+ GDPPEVWSGDGI
Sbjct: 62  VLLGGKFVEKGSQIFNHPRASQRVSKNSDKNWGRKLSSSRCNTVVSSQGDPPEVWSGDGI 121

Query: 123 VIR-GSNSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFV 182
           V+R    S+L   GGGGG  + GSGGGF SNS D+ WGGS+LG NFPTPKEI +GLDKFV
Sbjct: 122 VVRTAPGSNLVRGGGGGGGPSPGSGGGFDSNSKDDNWGGSNLGNNFPTPKEICQGLDKFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+  TGD+ N K +A DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEKAKKVLSVAVYNHYKRIYHESLQKWSTGDSSNGKVDATDDDRVELEKSNILLMGPT 241

Query: 243 GS----------------------------GYVGEDVESILYKLLMVADYNVAAAQQGIV 302
           GS                            GYVGEDVESILYKLL VADYNV AAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVTAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTDA VTSSLLE VESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLEIVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN------------ 482
            YGLIPEFVGRFPILVSLSALTENQLV+VLTEPKNALGKQY+KMF+MN            
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 -----------------------------DIPDVRTGEDIIDAVIVDEESIGLDSPGSGT 542
                                        +IP+VRTG+DIIDAV++DEE++GLD  G G 
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPEVRTGDDIIDAVVIDEEAVGLDGKGCGA 541

Query: 543 KILYGKGALDRYLSGQKATSQN----SEREPEPEGETDLPSVVAS-------GIIECVSS 602
           KILYGKGALDRY S  KA           + EPE ET+L SVVAS         IECVSS
Sbjct: 542 KILYGKGALDRYHSQNKAKDAEIATAEGTDGEPEAETELSSVVASMGRAMDLESIECVSS 601

Query: 603 SDGLDEDEIHLHH-TLHPYSHSH-HHPELSATKPR-NGSNNSGIAVPTATAPATSVHELL 662
           SDGLDEDEIH HH TLHP+ H H HH E S  KPR N + N  I  PTA APATSVHELL
Sbjct: 602 SDGLDEDEIHPHHNTLHPHPHPHQHHHEFS--KPRSNVTTNVTINGPTAIAPATSVHELL 661

Query: 663 ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 722
           ECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELPC
Sbjct: 662 ECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPC 721

Query: 723 KYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDMHT 782
           KYY+LGC EIFPYYSKLKHE++CN+RPY+CPYAGSEC+ VGDIPFLVAHLRDDHKVDMHT
Sbjct: 722 KYYALGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVDMHT 781

Query: 783 GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE 835
           G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE
Sbjct: 782 GYTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE 841

[Close]

BLAST of Lsi05G001030 vs. ExPASy TrEMBL
Match: A0A498JJX7 (RING-type E3 ubiquitin transferase OS=Malus domestica OX=3750 GN=DVH24_024891 PE=3 SV=1)

HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 671/918 (73.09%), Postives = 728/918 (79.30%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
           AAALRS+ S++ A+   S+ R+ + N +H+    +SH  +R K +DLF+N+PYH  SFKP
Sbjct: 2   AAALRSKPSRDTASSAASQFRYFVFNYMHSGRVASSHYAHRTKSDDLFMNTPYHFTSFKP 61

Query: 63  VSLRGDFVDNGTQPPDH----RRIYQNSTKNLNHKLSKRGC--FMSTYGDPPEVWSGDGI 122
           V L G+FV+ G+Q  DH    RR  +NS KN   KLS   C   MS+ GDPPEVWSGDGI
Sbjct: 62  VLLGGNFVEKGSQIFDHPRASRRASKNSDKNWGRKLSSSRCNGVMSSQGDPPEVWSGDGI 121

Query: 123 VIRGS-NSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFV 182
           V+R +  S+L   GGGGG  N GSGGGF SNS DE WGGS+LG NFPTPKEI +GLDKFV
Sbjct: 122 VVRAAPGSNLVRGGGGGGGPNPGSGGGFDSNSKDENWGGSNLGRNFPTPKEICQGLDKFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+   GD+ N K +A+DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEKAKKVLSVAVYNHYKRIYHESLQKWSAGDSSNGKVDAMDDDRVELEKSNILLMGPT 241

Query: 243 GS----------------------------GYVGEDVESILYKLLMVADYNVAAAQQGIV 302
           GS                            GYVGEDVESILYKLL VADYNV AAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVTAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTDA VTSSLLE VESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLEIVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN------------ 482
            YGLIPEFVGRFPILVSLSALTENQLV+VLTEPKNALGKQY+KMF+MN            
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 -----------------------------DIPDVRTGEDIIDAVIVDEESIGLDSPGSGT 542
                                        +IPDVRTG+DIIDAV++DEE++GLD  G G 
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPDVRTGDDIIDAVVIDEEAVGLDGKGCGA 541

Query: 543 KILYGKGALDRYLSGQK----ATSQNSEREPEPEGETDLPSVVAS-------GIIECVSS 602
           KILYGKGALD YLS  K      +     + EPE ET+L SVVAS         IECVSS
Sbjct: 542 KILYGKGALDHYLSQNKPKDVEIAAKEGSDGEPEAETELSSVVASMGRAMDLESIECVSS 601

Query: 603 SDGLDEDEIHLHH--TLHPYSHSH-HHPELSATKPR-NGSNNSGIAVPTATAPATSVHEL 662
           SDGLDEDEIH HH  TLHP+SH H HH E S  KPR N + N+ IA PT+ APATSVHEL
Sbjct: 602 SDGLDEDEIHPHHNTTLHPHSHPHPHHHEFS--KPRSNVTTNATIAGPTSIAPATSVHEL 661

Query: 663 LECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELP 722
           LECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELP
Sbjct: 662 LECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELP 721

Query: 723 CKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDMH 782
           CKYYSLGC EIFPYYSKLKHE++CN+RPY+CPYAGSEC+ VGDIPFLV HLRDDHKVDMH
Sbjct: 722 CKYYSLGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVTHLRDDHKVDMH 781

Query: 783 TGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEN 828
           TGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEN
Sbjct: 782 TGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEN 841

[Close]

BLAST of Lsi05G001030 vs. ExPASy TrEMBL
Match: A0A7J6HV44 (RING-type E3 ubiquitin transferase (Fragment) OS=Cannabis sativa OX=3483 GN=G4B88_023677 PE=3 SV=1)

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 674/1070 (62.99%), Postives = 736/1070 (68.79%), Query Frame = 0


Query: 3    AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
            AA LRS++SKE A+ T+S+ R+ + N +HA    +SHCT+R K +DL++N+PY   SFKP
Sbjct: 2    AAVLRSKASKETASFTVSQFRYFLLNHMHAGRMASSHCTHRTKLDDLYMNTPYSFTSFKP 61

Query: 63   VSLRGDFVDNGTQPPDHRRIYQNSTK-----NLNHKLS---KRGCFMSTYGDPPEVWSGD 122
            VSLRGDFVD GTQ  ++ R+   +       N + K+    +R    S+YGDPPEVWSGD
Sbjct: 62   VSLRGDFVDKGTQLSNNLRVSHEANSGTCDGNWDEKVGRNIRRRYISSSYGDPPEVWSGD 121

Query: 123  GIVIR-GSNSSL---NGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKG 182
            G+V+R GS  +L    G GGGGG SNSGS GGF SNS+D+CWGGS+LG +FPTPKEI KG
Sbjct: 122  GLVVRSGSTPNLVRGGGGGGGGGGSNSGSAGGFGSNSSDDCWGGSNLGSDFPTPKEICKG 181

Query: 183  LDKFVIGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNIL 242
            LDKFVIGQE+AKKVLSV VYNHYKRI+HES Q+ P GD+   K E  DD++VELEKSNIL
Sbjct: 182  LDKFVIGQEKAKKVLSVAVYNHYKRIHHESQQKWPAGDSATQKPEGTDDERVELEKSNIL 241

Query: 243  LMGPTGS------------------GYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEV 302
            LMGPTGS                  GYVGEDVESILYKLL VADYNVAAAQQGIVYIDEV
Sbjct: 242  LMGPTGSGKTLLAKTLARFVNVPFAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEV 301

Query: 303  DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFI 362
            DKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTKDILFI
Sbjct: 302  DKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTKDILFI 361

Query: 363  CGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLI 422
            CGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTD+ VTS+LLETVES DLI+YGLI
Sbjct: 362  CGGAFIDLEKTISERRQDSSIGFGAPVRANMRGGGVTDSAVTSTLLETVESGDLISYGLI 421

Query: 423  PEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN----------------- 482
            PEFVGRFP+LVSLSALTENQLVQVLTEPKNALGKQYRKMF+MN                 
Sbjct: 422  PEFVGRFPVLVSLSALTENQLVQVLTEPKNALGKQYRKMFRMNGVKLHFTERALRLISKK 481

Query: 483  ------------------------DIPDVRTGEDIIDAVIVDEESIGLD-SPGSGTKILY 542
                                    +IPDVRTG DIIDAV+VDEE++GL+   G G KILY
Sbjct: 482  AISKNTGARGLRSILENILMDAMYEIPDVRTGNDIIDAVVVDEEAVGLEGGQGCGAKILY 541

Query: 543  GKGALDRYLSGQK-------ATSQNSEREPEPEGETDLPSVVAS---------------- 602
            G GALD YLS QK       +T++ S+ EPE     +LPSVVAS                
Sbjct: 542  GNGALDSYLSQQKLKVVESVSTTEGSDVEPE-----ELPSVVASINMYIVFVTVGTTCFD 601

Query: 603  ------------------------------------------------------------ 662
                                                                        
Sbjct: 602  ALVKTMDTLVVKEELFRRGYTHLLIQMGRGSYVPTKSGGNGSLAVDYFTFSSSIADHLRS 661

Query: 663  ------------------------------------------------------------ 722
                                                                        
Sbjct: 662  ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQTELAEELANRKHLYYARPQTLNQI 721

Query: 723  ------------------------GIIECVSSSDGLDEDEIHLHH-TLHPYSHSH----- 782
                                      IECVSSSDGLDEDEIH HH TLHP+ H H     
Sbjct: 722  IKDMNLDLLVPYHSGDATPVAKLVNSIECVSSSDGLDEDEIHPHHTTLHPHPHPHTHPHQ 781

Query: 783  HHPELSATKPR-NGSNNSGIAVPTATAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCS 825
            HHPE S++K R NG+NNS I  P A APATSVHELLECPVCTNSMYPPIHQCHNGHTLCS
Sbjct: 782  HHPEFSSSKSRNNGTNNSSITGPNAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCS 841

[Close]

BLAST of Lsi05G001030 vs. ExPASy TrEMBL
Match: A0A6N2LLD0 (RING-type E3 ubiquitin transferase (Fragment) OS=Salix viminalis OX=40686 GN=SVIM_LOCUS250036 PE=3 SV=1)

HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 618/899 (68.74%), Postives = 689/899 (76.64%), Query Frame = 0


Query: 1   MAAAALRSRSSKEVANLTLSRCRHCISNSIH-ATTYPNSHCTNR-NKPNDLFLNSPYHLV 60
           MA AA+R + +K    +T S+ R+ + N +H  +   +SHC N+ +K +D F N+PYH  
Sbjct: 1   MALAAVRCKPTK----VTASQFRYFMFNYMHVGSRLSSSHCANKISKSDDHFANTPYHFT 60

Query: 61  SFKPVSLRGDFVDNGTQPPDHRRIYQNSTKNLNHKLSKRGCFMSTYGDPPEVWS--GDGI 120
           SFKPVSLRG+FV+   Q  ++ R   +S+ N     S  G   S YGDPPEVW   GDG+
Sbjct: 61  SFKPVSLRGEFVEKSAQLLENMR---SSSSN-----SGGG---SNYGDPPEVWQPPGDGV 120

Query: 121 VIRGSNSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFVI 180
                +        GGGN    S GG  + S D  WGGS+LG +FPTPKEI K LD FVI
Sbjct: 121 AKMKVSD-------GGGNFKVWSSGG--TGSKDGYWGGSNLGSSFPTPKEICKALDNFVI 180

Query: 181 GQERAKKVLSVGVYNHYKRIYHESL--QRPTGDTVNNKAEAVDDDKVELEKSNILLMGPT 240
           GQ RAKKVLSV VYNHYKRIY ++    R   D+ N KA+ +DD++VELEKSNILLMGPT
Sbjct: 181 GQRRAKKVLSVAVYNHYKRIYLDTTWGVRSNTDSGNEKADTMDDEEVELEKSNILLMGPT 240

Query: 241 GSGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQ 300
           GSGYVGEDVESILYKLL  ADYNVAAAQQGI+YIDE+DKITKKAES+NISRDVSGEGVQQ
Sbjct: 241 GSGYVGEDVESILYKLLTAADYNVAAAQQGIIYIDEIDKITKKAESVNISRDVSGEGVQQ 300

Query: 301 ALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFICGGAFIDLEKTISERRQDSSLGF 360
           ALLKMLEGTIVNVPEKGARKHPRG+NIQI+TKDILFICGGAFIDLEKTISERRQDSS+GF
Sbjct: 301 ALLKMLEGTIVNVPEKGARKHPRGDNIQINTKDILFICGGAFIDLEKTISERRQDSSIGF 360

Query: 361 GAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLIPEFVGRFPILVSLSALTENQLVQ 420
           GAPVRANMRAGGVT   VTSSLLET ESSDL++YGLIPEFVGRFPILVSL+ALTE+QLVQ
Sbjct: 361 GAPVRANMRAGGVTSTAVTSSLLETAESSDLVSYGLIPEFVGRFPILVSLAALTEDQLVQ 420

Query: 421 VLTEPKNALGKQYRKMFQMND--------------------------------------- 480
           VLTEPKNAL KQY+K+FQMND                                       
Sbjct: 421 VLTEPKNALEKQYKKLFQMNDVKLHVMENALRSIARNAITKNTGARALRSILENILMDSM 480

Query: 481 --IPDVRTGEDIIDAVIVDEESIGLDSPGSGTKILYGKGALDRYLSGQKATSQNSEREP- 540
             IPDVRTG+DIIDAV+VDE + G +  G G KILYG+GALDRYLS +K        E  
Sbjct: 481 YEIPDVRTGDDIIDAVVVDEVANGSEERGVGAKILYGRGALDRYLSEEKLKCSKKTMESS 540

Query: 541 --EPEGETDLPSVVAS-------------GIIECVSSSDGLDEDEIHLHHTLHPYSHSHH 600
             EPE E++LPS+VAS               IECVSSSDGLDEDEIH HH L       H
Sbjct: 541 DGEPEVESELPSIVASMCFLGKNCAVMEFDNIECVSSSDGLDEDEIH-HHNL------QH 600

Query: 601 HPELSATKPRNGSNNSG------IAVPTATAPATSVHELLECPVCTNSMYPPIHQCHNGH 660
             + +++KP N +NN+       +  PTA APATSVHELLECPVCTNSMYPPIHQCHNGH
Sbjct: 601 LHQFASSKPHNVNNNNHNGNTIVVGGPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGH 660

Query: 661 TLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLKHE 720
           TLCSTCKTRV N CPTCRQELGDIRCLALEKVAESLE PCKYY+LGC EIFPYYSKLKHE
Sbjct: 661 TLCSTCKTRVQNCCPTCRQELGDIRCLALEKVAESLEFPCKYYNLGCPEIFPYYSKLKHE 720

Query: 721 ALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVENAT 780
           A+CN+RPY+CPYAGSEC+ VGDIPFL+AHLRDDHKVDMHTGCTFNHRYVKSNPREVENAT
Sbjct: 721 AICNFRPYNCPYAGSECSVVGDIPFLIAHLRDDHKVDMHTGCTFNHRYVKSNPREVENAT 780

Query: 781 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLIWE 830
           WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE +AR Y YSLEVGG+GRKL WE
Sbjct: 781 WMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETDARNYIYSLEVGGHGRKLTWE 840

[Close]

BLAST of Lsi05G001030 vs. NCBI nr
Match: KAG6574254.1 (CLP protease regulatory subunit CLPX1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1528.8 bits (3957), Expect = 0.0e+00
Identity = 773/905 (85.41%), Postives = 800/905 (88.40%), Query Frame = 0


Query: 1   MAAAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSF 60
           MAAAALRSRSSKEVA+LTLSRCRHC+SN IH+ + P SHC +RNK NDL+L+SP+HLVSF
Sbjct: 1   MAAAALRSRSSKEVASLTLSRCRHCVSNYIHSASNPISHCASRNKSNDLYLSSPFHLVSF 60

Query: 61  KPVSLRGDFVDNGTQPPDHRRIYQNSTKNLNHKLSKRGCFMSTYGDPPEVWSGDGIVIRG 120
           K VSLRGDF+ +GTQP DHR  Y NS K LN +LS+ GCFMSTYGDPPEVWSGDGIVIRG
Sbjct: 61  KSVSLRGDFLHHGTQPFDHRGAYPNSNKTLNERLSRGGCFMSTYGDPPEVWSGDGIVIRG 120

Query: 121 SNSSLNGRGGGGGNS-NSGS-GGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFVIGQ 180
           SNSSLNG GGGGG S NSGS GGGF +NSND CWGGSSLGPNFPTPKEI+KGLDKFVIGQ
Sbjct: 121 SNSSLNGHGGGGGGSANSGSGGGGFGANSNDGCWGGSSLGPNFPTPKEISKGLDKFVIGQ 180

Query: 181 ERAKKVLSVGVYNHYKRIYHESLQRPTGDTVNNKAEAVDDDKVELEKSNILLMGPTGS-- 240
           ERAKKVLSVGVYNHYKRIYHESLQRPTGDTVNNKA+AVDDDKVELEKSNILLMGPTGS  
Sbjct: 181 ERAKKVLSVGVYNHYKRIYHESLQRPTGDTVNNKADAVDDDKVELEKSNILLMGPTGSGK 240

Query: 241 --------------------------GYVGEDVESILYKLLMVADYNVAAAQQGIVYIDE 300
                                     GYVGEDVESILYKLLMVADYNVAAAQQGIVYIDE
Sbjct: 241 TLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLMVADYNVAAAQQGIVYIDE 300

Query: 301 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILF 360
           VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILF
Sbjct: 301 VDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILF 360

Query: 361 ICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGL 420
           ICGGAFIDLEKTISERRQDSSLGFGAPVRANMRA GVTDA+VTSSLLETVESSDLIAYGL
Sbjct: 361 ICGGAFIDLEKTISERRQDSSLGFGAPVRANMRASGVTDAIVTSSLLETVESSDLIAYGL 420

Query: 421 IPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMND--------------- 480
           IPEFVGRFPILVSLSALTE+QLVQVLTEPKNALGKQYRKMFQMND               
Sbjct: 421 IPEFVGRFPILVSLSALTEDQLVQVLTEPKNALGKQYRKMFQMNDVKLHFTENALRLIAR 480

Query: 481 --------------------------IPDVRTGEDIIDAVIVDEESIGLDSPGSGTKILY 540
                                     IPDVRTGEDIIDAVI+DEESIG DS G G KILY
Sbjct: 481 KAMSKNTGARGLRSILENLLMDAMYEIPDVRTGEDIIDAVIIDEESIGSDSTGCGAKILY 540

Query: 541 GKGALDRYLSGQKATSQNSEREPEPEGETDLPSVVASGIIECVSSSDGLDEDEIHLHHTL 600
           GKGALDRYLSGQK TSQ SE+E EPE ETDLPSVVAS IIECVSSSDGLDEDEIHLHHTL
Sbjct: 541 GKGALDRYLSGQKTTSQGSEKEAEPESETDLPSVVASSIIECVSSSDGLDEDEIHLHHTL 600

Query: 601 HPYSHSHHHPELSATKPRNGSNNSGIAVPTATAPATSVHELLECPVCTNSMYPPIHQCHN 660
           H YSHSHHHPELSATKPRNG+NNS +A PTATAPATSVHELLECPVCTNSMYPPIHQCHN
Sbjct: 601 HSYSHSHHHPELSATKPRNGNNNSAVAGPTATAPATSVHELLECPVCTNSMYPPIHQCHN 660

Query: 661 GHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCTEIFPYYSKLK 720
           GHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC+YYSLGC EIFPYYSKLK
Sbjct: 661 GHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCRYYSLGCPEIFPYYSKLK 720

Query: 721 HEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPREVEN 780
           HEALCN+RPY+CPYAGSEC+AVGDIPFLV+HLRDDHKVDMHTGCTFNHRYVKSNPREVEN
Sbjct: 721 HEALCNFRPYNCPYAGSECSAVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPREVEN 780

Query: 781 ATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLI 835
           ATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLI
Sbjct: 781 ATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARTYSYSLEVGGYGRKLI 840

[Close]

BLAST of Lsi05G001030 vs. NCBI nr
Match: RXI08281.1 (hypothetical protein DVH24_022425 [Malus domestica])

HSP 1 Score: 1279.2 bits (3309), Expect = 0.0e+00
Identity = 676/926 (73.00%), Postives = 737/926 (79.59%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
           AAALRS+ S++ A+  +S+ R+ + N +HA    +SH  +R K +DLF+N+PYH  SFKP
Sbjct: 2   AAALRSKPSRDTASSAVSQFRYFVFNYMHAGRVASSHHAHRTKSDDLFMNTPYHFTSFKP 61

Query: 63  VSLRGDFVDNGTQ----PPDHRRIYQNSTKNLNHKLSKRGC--FMSTYGDPPEVWSGDGI 122
           V   G+FV+ G+Q    P   +R+ +NS KN   KLS   C   +S+ GDPPEVWSGDGI
Sbjct: 62  VLPGGNFVEKGSQIFNHPRASQRVSKNSDKNWGRKLSSSRCNTVVSSQGDPPEVWSGDGI 121

Query: 123 VIR-GSNSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFV 182
           V+R    S+L   GGGGG  + GSGGGF SNS DE WGGS+LG NFPTPKEI +GLD FV
Sbjct: 122 VVRTAPGSNLVRGGGGGGGPSPGSGGGFDSNSKDENWGGSNLGNNFPTPKEICQGLDTFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+  TGD+ N K +A+DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEKAKKVLSVAVYNHYKRIYHESLQKWSTGDSSNGKVDAMDDDRVELEKSNILLMGPT 241

Query: 243 GS----------------------------GYVGEDVESILYKLLMVADYNVAAAQQGIV 302
           GS                            GYVGEDVESILYKLL VADYNV AAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVTAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTDA VTSSLLE VESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLEIVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN------------ 482
            YGLIPEFVGRFPILVSLSALTENQLV+VLTEPKNALGKQY+KMF+MN            
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 -----------------------------DIPDVRTGEDIIDAVIVDEESIGLDSPGSGT 542
                                        +IP+VRTG+DIIDAV++DEE++GLD  G G 
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPEVRTGDDIIDAVVIDEEAVGLDGKGCGA 541

Query: 543 KILYGKGALDRYLSGQK------ATSQNSEREPEPEGETDLPSVVAS-------GIIECV 602
           KILYGKGALDRY S  K      AT++ S  + EPE ET+L SVVAS         IECV
Sbjct: 542 KILYGKGALDRYHSQNKAKDAEIATTEGS--DGEPEAETELSSVVASMGRAMDLESIECV 601

Query: 603 SSSDGLDEDEIHLHH-TLHPYSHSH-HHPELSATKPR-NGSNNSGIAVPTATAPATSVHE 662
           SSSDGLDEDEIH HH TLHP+ H H HH E S  KPR N + N+ I  PTA APATSVHE
Sbjct: 602 SSSDGLDEDEIHPHHNTLHPHPHPHQHHHEFS--KPRSNVTTNATINGPTAIAPATSVHE 661

Query: 663 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLEL 722
           LLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLEL
Sbjct: 662 LLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLEL 721

Query: 723 PCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDM 782
           PCKYY+LGC EIFPYYSKLKHE++CN+RPY+CPYAGSEC+ VGDIPFLVAHLRDDHKVDM
Sbjct: 722 PCKYYALGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVDM 781

Query: 783 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 835
           HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE
Sbjct: 782 HTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE 841

[Close]

BLAST of Lsi05G001030 vs. NCBI nr
Match: KAB2598772.1 (ATP-dependent Clp protease ATP-binding subunit clpX-like [Pyrus ussuriensis x Pyrus communis])

HSP 1 Score: 1275.0 bits (3298), Expect = 0.0e+00
Identity = 673/924 (72.84%), Postives = 730/924 (79.00%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
           AAALRS+ S++ A+  +S+ R+ + N +HA+   +SH  +R K  DLF+N+PYH  SF P
Sbjct: 2   AAALRSKPSRDTASSAVSQFRYFVFNYMHASRVASSHYAHRTKSEDLFMNTPYHFTSFNP 61

Query: 63  VSLRGDFVDNGTQ----PPDHRRIYQNSTKNLNHKLSKRGC--FMSTYGDPPEVWSGDGI 122
           V L G FV+ G+Q    P   +R+ +NS KN   KLS   C   +S+ GDPPEVWSGDGI
Sbjct: 62  VLLGGKFVEKGSQIFNHPRASQRVSKNSDKNWGRKLSSSRCNTVVSSQGDPPEVWSGDGI 121

Query: 123 VIR-GSNSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFV 182
           V+R    S+L   GGGGG  + GSGGGF SNS D+ WGGS+LG NFPTPKEI +GLDKFV
Sbjct: 122 VVRTAPGSNLVRGGGGGGGPSPGSGGGFDSNSKDDNWGGSNLGNNFPTPKEICQGLDKFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+  TGD+ N K +A DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEKAKKVLSVAVYNHYKRIYHESLQKWSTGDSSNGKVDATDDDRVELEKSNILLMGPT 241

Query: 243 GS----------------------------GYVGEDVESILYKLLMVADYNVAAAQQGIV 302
           GS                            GYVGEDVESILYKLL VADYNV AAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVTAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTDA VTSSLLE VESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLEIVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN------------ 482
            YGLIPEFVGRFPILVSLSALTENQLV+VLTEPKNALGKQY+KMF+MN            
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 -----------------------------DIPDVRTGEDIIDAVIVDEESIGLDSPGSGT 542
                                        +IP+VRTG+DIIDAV++DEE++GLD  G G 
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPEVRTGDDIIDAVVIDEEAVGLDGKGCGA 541

Query: 543 KILYGKGALDRYLSGQKATSQN----SEREPEPEGETDLPSVVAS-------GIIECVSS 602
           KILYGKGALDRY S  KA           + EPE ET+L SVVAS         IECVSS
Sbjct: 542 KILYGKGALDRYHSQNKAKDAEIATAEGTDGEPEAETELSSVVASMGRAMDLESIECVSS 601

Query: 603 SDGLDEDEIHLHH-TLHPYSHSH-HHPELSATKPR-NGSNNSGIAVPTATAPATSVHELL 662
           SDGLDEDEIH HH TLHP+ H H HH E S  KPR N + N  I  PTA APATSVHELL
Sbjct: 602 SDGLDEDEIHPHHNTLHPHPHPHQHHHEFS--KPRSNVTTNVTINGPTAIAPATSVHELL 661

Query: 663 ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC 722
           ECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELPC
Sbjct: 662 ECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPC 721

Query: 723 KYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDMHT 782
           KYY+LGC EIFPYYSKLKHE++CN+RPY+CPYAGSEC+ VGDIPFLVAHLRDDHKVDMHT
Sbjct: 722 KYYALGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVDMHT 781

Query: 783 GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE 835
           G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE
Sbjct: 782 GYTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENE 841

[Close]

BLAST of Lsi05G001030 vs. NCBI nr
Match: RXH95207.1 (hypothetical protein DVH24_024891 [Malus domestica])

HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 671/918 (73.09%), Postives = 728/918 (79.30%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
           AAALRS+ S++ A+   S+ R+ + N +H+    +SH  +R K +DLF+N+PYH  SFKP
Sbjct: 2   AAALRSKPSRDTASSAASQFRYFVFNYMHSGRVASSHYAHRTKSDDLFMNTPYHFTSFKP 61

Query: 63  VSLRGDFVDNGTQPPDH----RRIYQNSTKNLNHKLSKRGC--FMSTYGDPPEVWSGDGI 122
           V L G+FV+ G+Q  DH    RR  +NS KN   KLS   C   MS+ GDPPEVWSGDGI
Sbjct: 62  VLLGGNFVEKGSQIFDHPRASRRASKNSDKNWGRKLSSSRCNGVMSSQGDPPEVWSGDGI 121

Query: 123 VIRGS-NSSLNGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGLDKFV 182
           V+R +  S+L   GGGGG  N GSGGGF SNS DE WGGS+LG NFPTPKEI +GLDKFV
Sbjct: 122 VVRAAPGSNLVRGGGGGGGPNPGSGGGFDSNSKDENWGGSNLGRNFPTPKEICQGLDKFV 181

Query: 183 IGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNILLMGPT 242
           IGQE+AKKVLSV VYNHYKRIYHESLQ+   GD+ N K +A+DDD+VELEKSNILLMGPT
Sbjct: 182 IGQEKAKKVLSVAVYNHYKRIYHESLQKWSAGDSSNGKVDAMDDDRVELEKSNILLMGPT 241

Query: 243 GS----------------------------GYVGEDVESILYKLLMVADYNVAAAQQGIV 302
           GS                            GYVGEDVESILYKLL VADYNV AAQQGIV
Sbjct: 242 GSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVTAAQQGIV 301

Query: 303 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTK 362
           YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTK
Sbjct: 302 YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTK 361

Query: 363 DILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLI 422
           DILFICGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTDA VTSSLLE VESSDLI
Sbjct: 362 DILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLEIVESSDLI 421

Query: 423 AYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN------------ 482
            YGLIPEFVGRFPILVSLSALTENQLV+VLTEPKNALGKQY+KMF+MN            
Sbjct: 422 RYGLIPEFVGRFPILVSLSALTENQLVEVLTEPKNALGKQYKKMFRMNGVKLHFTESALR 481

Query: 483 -----------------------------DIPDVRTGEDIIDAVIVDEESIGLDSPGSGT 542
                                        +IPDVRTG+DIIDAV++DEE++GLD  G G 
Sbjct: 482 LIARKAISKNTGARGLRAILENILMDAMYEIPDVRTGDDIIDAVVIDEEAVGLDGKGCGA 541

Query: 543 KILYGKGALDRYLSGQK----ATSQNSEREPEPEGETDLPSVVAS-------GIIECVSS 602
           KILYGKGALD YLS  K      +     + EPE ET+L SVVAS         IECVSS
Sbjct: 542 KILYGKGALDHYLSQNKPKDVEIAAKEGSDGEPEAETELSSVVASMGRAMDLESIECVSS 601

Query: 603 SDGLDEDEIHLHH--TLHPYSHSH-HHPELSATKPR-NGSNNSGIAVPTATAPATSVHEL 662
           SDGLDEDEIH HH  TLHP+SH H HH E S  KPR N + N+ IA PT+ APATSVHEL
Sbjct: 602 SDGLDEDEIHPHHNTTLHPHSHPHPHHHEFS--KPRSNVTTNATIAGPTSIAPATSVHEL 661

Query: 663 LECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELP 722
           LECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELP
Sbjct: 662 LECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELP 721

Query: 723 CKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVDMH 782
           CKYYSLGC EIFPYYSKLKHE++CN+RPY+CPYAGSEC+ VGDIPFLV HLRDDHKVDMH
Sbjct: 722 CKYYSLGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVTHLRDDHKVDMH 781

Query: 783 TGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEN 828
           TGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEN
Sbjct: 782 TGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEN 841

[Close]

BLAST of Lsi05G001030 vs. NCBI nr
Match: KAF4399083.1 (hypothetical protein G4B88_023677, partial [Cannabis sativa])

HSP 1 Score: 1223.0 bits (3163), Expect = 0.0e+00
Identity = 674/1070 (62.99%), Postives = 736/1070 (68.79%), Query Frame = 0


Query: 3    AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNSHCTNRNKPNDLFLNSPYHLVSFKP 62
            AA LRS++SKE A+ T+S+ R+ + N +HA    +SHCT+R K +DL++N+PY   SFKP
Sbjct: 2    AAVLRSKASKETASFTVSQFRYFLLNHMHAGRMASSHCTHRTKLDDLYMNTPYSFTSFKP 61

Query: 63   VSLRGDFVDNGTQPPDHRRIYQNSTK-----NLNHKLS---KRGCFMSTYGDPPEVWSGD 122
            VSLRGDFVD GTQ  ++ R+   +       N + K+    +R    S+YGDPPEVWSGD
Sbjct: 62   VSLRGDFVDKGTQLSNNLRVSHEANSGTCDGNWDEKVGRNIRRRYISSSYGDPPEVWSGD 121

Query: 123  GIVIR-GSNSSL---NGRGGGGGNSNSGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKG 182
            G+V+R GS  +L    G GGGGG SNSGS GGF SNS+D+CWGGS+LG +FPTPKEI KG
Sbjct: 122  GLVVRSGSTPNLVRGGGGGGGGGGSNSGSAGGFGSNSSDDCWGGSNLGSDFPTPKEICKG 181

Query: 183  LDKFVIGQERAKKVLSVGVYNHYKRIYHESLQR-PTGDTVNNKAEAVDDDKVELEKSNIL 242
            LDKFVIGQE+AKKVLSV VYNHYKRI+HES Q+ P GD+   K E  DD++VELEKSNIL
Sbjct: 182  LDKFVIGQEKAKKVLSVAVYNHYKRIHHESQQKWPAGDSATQKPEGTDDERVELEKSNIL 241

Query: 243  LMGPTGS------------------GYVGEDVESILYKLLMVADYNVAAAQQGIVYIDEV 302
            LMGPTGS                  GYVGEDVESILYKLL VADYNVAAAQQGIVYIDEV
Sbjct: 242  LMGPTGSGKTLLAKTLARFVNVPFAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEV 301

Query: 303  DKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQIDTKDILFI 362
            DKITKKAESLNISRDVSGEGVQQALLKMLEGT+VNVPEKGARKHPRGENIQIDTKDILFI
Sbjct: 302  DKITKKAESLNISRDVSGEGVQQALLKMLEGTVVNVPEKGARKHPRGENIQIDTKDILFI 361

Query: 363  CGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVESSDLIAYGLI 422
            CGGAFIDLEKTISERRQDSS+GFGAPVRANMR GGVTD+ VTS+LLETVES DLI+YGLI
Sbjct: 362  CGGAFIDLEKTISERRQDSSIGFGAPVRANMRGGGVTDSAVTSTLLETVESGDLISYGLI 421

Query: 423  PEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN----------------- 482
            PEFVGRFP+LVSLSALTENQLVQVLTEPKNALGKQYRKMF+MN                 
Sbjct: 422  PEFVGRFPVLVSLSALTENQLVQVLTEPKNALGKQYRKMFRMNGVKLHFTERALRLISKK 481

Query: 483  ------------------------DIPDVRTGEDIIDAVIVDEESIGLD-SPGSGTKILY 542
                                    +IPDVRTG DIIDAV+VDEE++GL+   G G KILY
Sbjct: 482  AISKNTGARGLRSILENILMDAMYEIPDVRTGNDIIDAVVVDEEAVGLEGGQGCGAKILY 541

Query: 543  GKGALDRYLSGQK-------ATSQNSEREPEPEGETDLPSVVAS---------------- 602
            G GALD YLS QK       +T++ S+ EPE     +LPSVVAS                
Sbjct: 542  GNGALDSYLSQQKLKVVESVSTTEGSDVEPE-----ELPSVVASINMYIVFVTVGTTCFD 601

Query: 603  ------------------------------------------------------------ 662
                                                                        
Sbjct: 602  ALVKTMDTLVVKEELFRRGYTHLLIQMGRGSYVPTKSGGNGSLAVDYFTFSSSIADHLRS 661

Query: 663  ------------------------------------------------------------ 722
                                                                        
Sbjct: 662  ASLVISHAGSGSIFETLRLGKPLIVVVNEDLMDNHQTELAEELANRKHLYYARPQTLNQI 721

Query: 723  ------------------------GIIECVSSSDGLDEDEIHLHH-TLHPYSHSH----- 782
                                      IECVSSSDGLDEDEIH HH TLHP+ H H     
Sbjct: 722  IKDMNLDLLVPYHSGDATPVAKLVNSIECVSSSDGLDEDEIHPHHTTLHPHPHPHTHPHQ 781

Query: 783  HHPELSATKPR-NGSNNSGIAVPTATAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCS 825
            HHPE S++K R NG+NNS I  P A APATSVHELLECPVCTNSMYPPIHQCHNGHTLCS
Sbjct: 782  HHPEFSSSKSRNNGTNNSSITGPNAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCS 841

[Close]

BLAST of Lsi05G001030 vs. TAIR 10
Match: AT5G53350.1 (CLP protease regulatory subunit X )

HSP 1 Score: 586.6 bits (1511), Expect = 3.1e-167
Identity = 361/592 (60.98%), Postives = 409/592 (69.09%), Query Frame = 0


Query: 3   AAALRSRSSKEVANLTLSRCRHCISNSIHATTYPNS--HCTNRNKPNDLFLNSPYHLVSF 62
           AAALRS +S+E A+LTLS  R+ I N IH      S  HC +R+K ++ F   PY     
Sbjct: 2   AAALRSNTSRETASLTLSHFRYFIFNRIHTARTATSPPHCNHRSKSDEKF---PY----- 61

Query: 63  KPVSLRGDFVDNGTQPPDHRRIYQNSTK--NLNHKLSKRG---CFMSTYGDPPEVWS--G 122
           K  SL   F+DN  +    RR   NSTK      KLS  G     +S+ GDPP++W   G
Sbjct: 62  KISSLGTSFLDN--RGGGERR---NSTKCYAAQKKLSGVGSSVVILSSQGDPPDLWQPPG 121

Query: 123 DGIVIRGSNSSLN-GRGGGGGNSN-SGSGGGFSSNSNDECWGGSSLGPNFPTPKEIAKGL 182
           DG+ +R + SS+N GRGGGGG S+  G G G  SNS ++CWGGS+LG +FPTPKEI KGL
Sbjct: 122 DGVSVRVNGSSVNLGRGGGGGGSSPGGPGNGTGSNSKEDCWGGSNLGSDFPTPKEICKGL 181

Query: 183 DKFVIGQERAKKVLSVGVYNHYKRIYHESLQ-RPTGDTVNNKAEAVDDDKVELEKSNILL 242
           +KFVIGQERAKKVLSV VYNHYKRIYHES Q R  G+T +  A+  DDD VELEKSNILL
Sbjct: 182 NKFVIGQERAKKVLSVAVYNHYKRIYHESSQKRSAGETDSTAAKPADDDMVELEKSNILL 241

Query: 243 MGPTGS----------------------------GYVGEDVESILYKLLMVADYNVAAAQ 302
           MGPTGS                            GYVGEDVESILYKLL VADYNVAAAQ
Sbjct: 242 MGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQ 301

Query: 303 QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENIQ 362
           QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRG+NIQ
Sbjct: 302 QGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQ 361

Query: 363 IDTKDILFICGGAFIDLEKTISERRQDSSLGFGAPVRANMRAGGVTDAMVTSSLLETVES 422
           IDTKDILFICGGAF+D+EKTISERR DSS+GFGAPVRANMRAGGVT+A V S+L+ETVES
Sbjct: 362 IDTKDILFICGGAFVDIEKTISERRHDSSIGFGAPVRANMRAGGVTNAAVASNLMETVES 421

Query: 423 SDLIAYGLIPEFVGRFPILVSLSALTENQLVQVLTEPKNALGKQYRKMFQMN-------- 482
           SDLIAYGLIPEFVGRFP+LVSLSALTENQL+QVLTEPKNALGKQY+KM+QMN        
Sbjct: 422 SDLIAYGLIPEFVGRFPVLVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTE 481

Query: 483 ---------------------------------DIPDVRTGEDIIDAVIVDEESI-GLDS 507
                                            +IPD  TG D+I+AV+VDEE++ G   
Sbjct: 482 SALRLIARKAITKNTGARGLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAVEGEGR 541

[Close]

BLAST of Lsi05G001030 vs. TAIR 10
Match: AT3G61790.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 556.2 bits (1432), Expect = 4.4e-158
Identity = 261/327 (79.82%), Postives = 275/327 (84.10%), Query Frame = 0


Query: 509 IECVSSSDGLDEDEIHLHHTLHPYSHSHHHPELSATKPRNGSNNSGIAVPTATAPATSVH 568
           ++C S+ D  D++EIH     +     HHH         N + N   A        TSVH
Sbjct: 6   MDCTSTMDVTDDEEIHQDRHSYASVSKHHH-------TNNNTTNVNAAASGLLPTTTSVH 65

Query: 569 ELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLE 628
           ELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLE
Sbjct: 66  ELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLE 125

Query: 629 LPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHKVD 688
           LPCK+ SLGC EIFPYYSKLKHE +CN+RPYSCPYAGSEC+  GDIPFLVAHLRDDHKVD
Sbjct: 126 LPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAHLRDDHKVD 185

Query: 689 MHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 748
           MH+GCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD
Sbjct: 186 MHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGD 245

Query: 749 ENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKE 808
           E EAR Y+YSLEVGGYGRKLIWEGTPRS+RDSHRKVRDSHDGLIIQRNMALFFSGGDRKE
Sbjct: 246 ETEARNYNYSLEVGGYGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKE 305

Query: 809 LKLRVTGRIWKEQNPD---AGVCIPNL 833
           LKLRVTGRIWKEQ       G CIPNL
Sbjct: 306 LKLRVTGRIWKEQQQSGEGGGACIPNL 325

[Close]

BLAST of Lsi05G001030 vs. TAIR 10
Match: AT4G27880.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 553.1 bits (1424), Expect = 3.7e-157
Identity = 263/331 (79.46%), Postives = 285/331 (86.10%), Query Frame = 0


Query: 509 IECVSSSDGLDEDEIHLHHTLHPYSHSHHHPELSATKPRNGSNNSGIAV----PTATAPA 568
           +ECVSS+           + +H   + H   + S+TK   G+  + +      PTATAPA
Sbjct: 6   MECVSSTG----------NEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPA 65

Query: 569 TSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVA 628
           TSV+ELLECPVCT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVA
Sbjct: 66  TSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVA 125

Query: 629 ESLELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDD 688
           ESLELPCK+Y+LGC EIFPYYSKLKHE+LCN+RPYSCPYAGSEC  VGDIPFLVAHLRDD
Sbjct: 126 ESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDD 185

Query: 689 HKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLR 748
           HKVDMH G TFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGM PVYMAFLR
Sbjct: 186 HKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLR 245

Query: 749 FMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGG 808
           FMGDE +AR+YSYSLEVGG GRKL WEGTPRSIRDSHRKVRDS+DGLIIQRNMALFFSGG
Sbjct: 246 FMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGG 305

Query: 809 DRKELKLRVTGRIWKEQ-NPDAGVCIPNLCS 835
           DRKELKLRVTG+IWKEQ +PD+G+ IPNL S
Sbjct: 306 DRKELKLRVTGKIWKEQHSPDSGLSIPNLSS 326

[Close]

BLAST of Lsi05G001030 vs. TAIR 10
Match: AT3G58040.1 (seven in absentia of Arabidopsis 2 )

HSP 1 Score: 468.8 bits (1205), Expect = 9.3e-132
Identity = 210/255 (82.35%), Postives = 230/255 (90.20%), Query Frame = 0


Query: 567 VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAES 626
           V+ELLECPVCTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAES
Sbjct: 54  VYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAES 113

Query: 627 LELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRDDHK 686
           LE+PC+Y +LGC +IFPYYSKLKHE  C +RPY+CPYAGSEC+  GDIP LV HL+DDHK
Sbjct: 114 LEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVHLKDDHK 173

Query: 687 VDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFM 746
           VDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFLRFM
Sbjct: 174 VDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFM 233

Query: 747 GDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDR 806
           GDENEA+ +SYSLEVG +GRKL W+G PRSIRDSHRKVRDS DGLII RN+AL+FSGGDR
Sbjct: 234 GDENEAKKFSYSLEVGAHGRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGGDR 293

Query: 807 KELKLRVTGRIWKEQ 822
           +ELKLRVTGRIWKE+
Sbjct: 294 QELKLRVTGRIWKEE 308

[Close]

BLAST of Lsi05G001030 vs. TAIR 10
Match: AT2G41980.1 (Protein with RING/U-box and TRAF-like domains )

HSP 1 Score: 461.1 bits (1185), Expect = 1.9e-129
Identity = 207/258 (80.23%), Postives = 229/258 (88.76%), Query Frame = 0


Query: 564 ATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKV 623
           +  V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKV
Sbjct: 48  SNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKV 107

Query: 624 AESLELPCKYYSLGCTEIFPYYSKLKHEALCNYRPYSCPYAGSECAAVGDIPFLVAHLRD 683
           AESLE+PC+Y +LGC +IFPYYSKLKHE  C +R YSCPYAGSEC+  GDIP LV HL+D
Sbjct: 108 AESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKD 167

Query: 684 DHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFL 743
           DHKVDMH GCTFNHRYVKSNP EVENATWMLTVF+CFG+ FCLHFEAFQLGMAPVYMAFL
Sbjct: 168 DHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFL 227

Query: 744 RFMGDENEARTYSYSLEVGGYGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSG 803
           RFMGDENEA+ +SYSLEVG + RKL W+G PRSIRDSHRKVRDS DGLII RN+AL+FSG
Sbjct: 228 RFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSG 287

Query: 804 GDRKELKLRVTGRIWKEQ 822
            D++ELKLRVTGRIWKE+
Sbjct: 288 SDKEELKLRVTGRIWKEE 305

The following BLAST results are available for this feature:

BLAST of Lsi05G001030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FK07	4.3e-166	60.98	CLP protease regulatory subunit CLPX1, mitochondrial OS=Arabidopsis thaliana OX=...	[more]
Q84JL3	6.2e-157	79.82	E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana OX=3702 GN=SINAT3 PE=...	[more]
Q9STN8	5.3e-156	79.46	E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana OX=3702 GN=SINAT4 PE=...	[more]
Q8S3N1	6.9e-156	79.82	E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana OX=3702 GN=SINAT5 PE=...	[more]
Q10L91	4.3e-134	80.59	E3 ubiquitin-protein ligase DIS1 OS=Oryza sativa subsp. japonica OX=39947 GN=DIS...	[more]

BLAST of Lsi05G001030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A498KM86	0.0e+00	73.00	RING-type E3 ubiquitin transferase OS=Malus domestica OX=3750 GN=DVH24_022425 PE...	[more]
A0A5N5FBZ9	0.0e+00	72.84	RING-type E3 ubiquitin transferase OS=Pyrus ussuriensis x Pyrus communis OX=2448...	[more]
A0A498JJX7	0.0e+00	73.09	RING-type E3 ubiquitin transferase OS=Malus domestica OX=3750 GN=DVH24_024891 PE...	[more]
A0A7J6HV44	0.0e+00	62.99	RING-type E3 ubiquitin transferase (Fragment) OS=Cannabis sativa OX=3483 GN=G4B8...	[more]
A0A6N2LLD0	0.0e+00	68.74	RING-type E3 ubiquitin transferase (Fragment) OS=Salix viminalis OX=40686 GN=SVI...	[more]

BLAST of Lsi05G001030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6574254.1	0.0e+00	85.41	CLP protease regulatory subunit CLPX1, mitochondrial, partial [Cucurbita argyros...	[more]
RXI08281.1	0.0e+00	73.00	hypothetical protein DVH24_022425 [Malus domestica]	[more]
KAB2598772.1	0.0e+00	72.84	ATP-dependent Clp protease ATP-binding subunit clpX-like [Pyrus ussuriensis x Py...	[more]
RXH95207.1	0.0e+00	73.09	hypothetical protein DVH24_024891 [Malus domestica]	[more]
KAF4399083.1	0.0e+00	62.99	hypothetical protein G4B88_023677, partial [Cannabis sativa]	[more]

BLAST of Lsi05G001030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53350.1	3.1e-167	60.98	CLP protease regulatory subunit X	[more]
AT3G61790.1	4.4e-158	79.82	Protein with RING/U-box and TRAF-like domains	[more]
AT4G27880.1	3.7e-157	79.46	Protein with RING/U-box and TRAF-like domains	[more]
AT3G58040.1	9.3e-132	82.35	seven in absentia of Arabidopsis 2	[more]
AT2G41980.1	1.9e-129	80.23	Protein with RING/U-box and TRAF-like domains	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003959	ATPase, AAA-type, core	PFAM	PF07724	AAA_2	coord: 240..400 e-value: 5.1E-31 score: 108.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 157..236 e-value: 4.0E-21 score: 77.5 coord: 237..405 e-value: 3.2E-70 score: 238.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 161..447
None	No IPR available	GENE3D	1.10.8.60		coord: 406..456 e-value: 6.8E-8 score: 34.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..500
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 531..553
None	No IPR available	PANTHER	PTHR48102:SF6	CLP PROTEASE REGULATORY SUBUNIT CLPX1, MITOCHONDRIAL	coord: 3..237 coord: 435..506
None	No IPR available	PANTHER	PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	coord: 3..237 coord: 435..506
None	No IPR available	PANTHER	PTHR48102	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	coord: 237..436
None	No IPR available	PANTHER	PTHR48102:SF6	CLP PROTEASE REGULATORY SUBUNIT CLPX1, MITOCHONDRIAL	coord: 237..436
None	No IPR available	CDD	cd03829	Sina	coord: 687..815 e-value: 1.9894E-64 score: 209.55
None	No IPR available	CDD	cd16571	RING-HC_SIAHs	coord: 571..609 e-value: 2.25094E-17 score: 74.2434
None	No IPR available	SUPERFAMILY	49599	TRAF domain-like	coord: 626..818
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 560..612
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 536..625 e-value: 2.5E-6 score: 29.0
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 626..681 e-value: 1.1E-16 score: 62.7
IPR018121	Seven-in-absentia protein, TRAF-like domain	PFAM	PF03145	Sina	coord: 615..814 e-value: 5.8E-78 score: 261.4
IPR008974	TRAF-like	GENE3D	2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	coord: 682..814 e-value: 3.1E-37 score: 129.3
IPR013010	Zinc finger, SIAH-type	PROSITE	PS51081	ZF_SIAH	coord: 626..686 score: 14.125784
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 573..609 score: 9.464913

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001030.1	Lsi05G001030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007275	multicellular organism development
biological_process	GO:0006457	protein folding
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding