Lsi05G000400 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G000400
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	FLZ-type domain-containing protein
Location	chr05: 801650 .. 802750 (+)
RNA-Seq Expression	Lsi05G000400
Synteny	Lsi05G000400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGATTCAGAAGAAGGAACAACAATGGATTCTTCTGCAACTGCGAGAAGGCCGTATTTCATCGACGAAGACGATGGATTGGTCTCTTTAGTCGATGTGGAAGCTGGAATTTCTGGAAACCACCACAACCACAGCCACTATCCTAACTCTTTCTTCCTCCGCCCCAAGGTAATTTGCCACGGCGGCGCTCTCCGGCGAACCACCAGAAACCTCTCGTTTTCATCCTCTAGAATCTCACCGAGGTTTTACGACACCAGATTTGAAGATCACCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAGCCGCTTTCTGATAACAAAGACATTTTCATGTACAGGTTAGTTTTTTCCTTTTCTTTCTTCTTGAAGGAGAATTGTGGATTTTGGTTTTGATTTCATGAATCGGAGAATCTGTTTGGTGATTTGAATCAGAGAAACCTAATGGAAATAGGGACCGATGTTTTAATTCTTTCTTTTTCTAGTATTTTGACGAACATATATAAAATCTGGAGATCTGTTTTAATTACGAAGAAGAAGAAGAAGAAGAATAAATATTTGGATCTGTGGTTGATTCTGATGATATTATTATAATTATGATCTGCAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGACATGGACGAAGCGAAAGAGAAGAAGTTGAATCTATCATCGTCTATGAAAGCTATGAGGAAAAAAGATCAGAGAAAATCTACTTCTCCGGGCAAATCCACCACCGACCACGACTGCCGTTTTCGCCCCGGCACGGTGGCGGCGGCTTAGATCAAGGAATAATCATTCCCGGAAAAGATGTAAAGATTTGAAGACTGAAGAAGAAGAAGAAGAACCGGGAAGAGCAGAGAGTTGGTTTTGGTTATAATTTTTGTTTTTTTTTTTGTTTTTTTGTTTTTGTTTTTATTTGGGGGTTTAAATTGTGGTGAGAAAATTATTCAACTGTGAATGAAGTTGTGTGGATGGCGGGTGAGGAAGTCTTGTGTTCATTTTTTTTTACTGGGATTTGCT

mRNA sequence

TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGATTCAGAAGAAGGAACAACAATGGATTCTTCTGCAACTGCGAGAAGGCCGTATTTCATCGACGAAGACGATGGATTGGTCTCTTTAGTCGATGTGGAAGCTGGAATTTCTGGAAACCACCACAACCACAGCCACTATCCTAACTCTTTCTTCCTCCGCCCCAAGGTAATTTGCCACGGCGGCGCTCTCCGGCGAACCACCAGAAACCTCTCGTTTTCATCCTCTAGAATCTCACCGAGGTTTTACGACACCAGATTTGAAGATCACCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAGCCGCTTTCTGATAACAAAGACATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGACATGGACGAAGCGAAAGAGAAGAAGTTGAATCTATCATCGTCTATGAAAGCTATGAGGAAAAAAGATCAGAGAAAATCTACTTCTCCGGGCAAATCCACCACCGACCACGACTGCCGTTTTCGCCCCGGCACGGTGGCGGCGGCTTAGATCAAGGAATAATCATTCCCGGAAAAGATGTAAAGATTTGAAGACTGAAGAAGAAGAAGAAGAACCGGGAAGAGCAGAGAGTTGGTTTTGGTTATAATTTTTGTTTTTTTTTTTGTTTTTTTGTTTTTGTTTTTATTTGGGGGTTTAAATTGTGGTGAGAAAATTATTCAACTGTGAATGAAGTTGTGTGGATGGCGGGTGAGGAAGTCTTGTGTTCATTTTTTTTTACTGGGATTTGCT

Coding sequence (CDS)

ATGGATTCTTCTGCAACTGCGAGAAGGCCGTATTTCATCGACGAAGACGATGGATTGGTCTCTTTAGTCGATGTGGAAGCTGGAATTTCTGGAAACCACCACAACCACAGCCACTATCCTAACTCTTTCTTCCTCCGCCCCAAGGTAATTTGCCACGGCGGCGCTCTCCGGCGAACCACCAGAAACCTCTCGTTTTCATCCTCTAGAATCTCACCGAGGTTTTACGACACCAGATTTGAAGATCACCATCACCATTTCTTGGAAGCTTGTTTTCTCTGCAAGAAGCCGCTTTCTGATAACAAAGACATTTTCATGTACAGAGGAGACACTCCATTTTGCAGCGAAGAGTGTAGACAAAAGCAAATCGACATGGACGAAGCGAAAGAGAAGAAGTTGAATCTATCATCGTCTATGAAAGCTATGAGGAAAAAAGATCAGAGAAAATCTACTTCTCCGGGCAAATCCACCACCGACCACGACTGCCGTTTTCGCCCCGGCACGGTGGCGGCGGCTTAG

Protein sequence

MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNHSHYPNSFFLRPKVICHGGALRRTTRNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA

Homology

[Close]

BLAST of Lsi05G000400 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.8e-34
Identity = 89/180 (49.44%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 6   TARRPYFIDEDDG---LVSLVDVEAGISGNHHNHSHY--PNSFFLRPKVICHG--GALRR 65
           ++R+PYFI+E++      SL ++EAG SGN++N +++  P +  +      +G   +LR 
Sbjct: 4   SSRKPYFIEEEEEENLASSLSEMEAGFSGNNNNSNNHGNPQNGVVSSSRFSYGRLNSLRN 63

Query: 66  TT----RNLSFSSSR--ISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPF 125
           +        S SS R  +S RF+D RF+    HFL++CFLCKKPL DN+DI+MYRGDTPF
Sbjct: 64  SQSYYYNQYSVSSPRSVVSGRFHDFRFDIQQPHFLDSCFLCKKPLGDNRDIYMYRGDTPF 123

Query: 126 CSEECRQKQIDMDEAKEKKLNLSSSMK-AMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           CSEECRQ+QI+ DEAKEKK NLS S+K AMR+K+Q   +SP   T   D  F  GTVAAA
Sbjct: 124 CSEECRQEQIERDEAKEKKQNLSHSVKSAMRRKEQ---SSP---TRSRDYAFHNGTVAAA 177

[Close]

BLAST of Lsi05G000400 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-33
Identity = 85/170 (50.00%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 8   RRPYFI-DEDDGLVSLVDVEAGISGNHHNHSHYPNSFFLRPKVICHGGALRRTTRNLSFS 67
           R+PYFI +EDDG VSL ++EAG+S    +  +YP S++                   S S
Sbjct: 6   RKPYFIEEEDDGFVSLSEMEAGVSS--PSCYNYPQSYY-----------YNHHHHQYSVS 65

Query: 68  SSRISPRFYDTRFEDHHH-----HFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQ 127
           S R S +F+D RF++ ++     HFL++CFLCKK L DN+DIFMYRGDTPFCSEECR++Q
Sbjct: 66  SPR-SGKFHDFRFDNSYYGYGQPHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQ 125

Query: 128 IDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           I+ DEAKEKK +LS+S+KAMR+ ++R S+S    T   +  FR GTVAAA
Sbjct: 126 IERDEAKEKKQSLSTSVKAMRRNEKRSSSS--SPTRSRNYAFRTGTVAAA 159

[Close]

BLAST of Lsi05G000400 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.9e-12
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 85  HFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAKEKKLNLSSSMKAMRKK 144
           HFLE+C LC+K L  N DIFMYRGD  FCS ECR++QI+ DEAKE+K   SS  +++RK 
Sbjct: 15  HFLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKERKWKKSS--RSLRKN 74

Query: 145 DQRKSTSPGKSTTDHDCRFRPGTVAAA 172
                 S   +T       R GT+  A
Sbjct: 75  SSETKESAAGNTV------RTGTLVVA 93

[Close]

BLAST of Lsi05G000400 vs. ExPASy Swiss-Prot
Match: Q8VY80 (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 70  ISPRFYDTRF-EDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAK 129
           +SPR    R   D+   FL +C LCK+ L   +DI+MYRGD  FCS ECRQ+QI +DE K
Sbjct: 61  VSPRGTQRRHSSDYSEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERK 120

Query: 130 EKK 132
           EKK
Sbjct: 121 EKK 123

[Close]

BLAST of Lsi05G000400 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.1e-10
Identity = 40/129 (31.01%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 30  SGNHHNHSHYPNSFFLRPKVICHGGALRRTTRNLSFSSSRISPRFYDTRFEDHHHHFLEA 89
           + N++N +       + PKV+     +   T  ++  ++ +   + D+        FLE 
Sbjct: 21  NNNNNNKNPLSEGVLISPKVVNKANII--VTTAVTTDTTNLRRCYQDS-------GFLEH 80

Query: 90  CFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAKEKKLNLSSSMKAMRKKDQRKS 149
           CFLC++ L   KDI+MY+GD  FCS ECR KQ+ MDE +  +    S M   +KK    +
Sbjct: 81  CFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDEEESLRREYCSLMDVKKKKFDSPA 140

Query: 150 TSPGKSTTD 159
           T+P +   D
Sbjct: 141 TAPSRYRRD 140

[Close]

BLAST of Lsi05G000400 vs. ExPASy TrEMBL
Match: A0A5D3E683 (Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G003980 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 154/172 (89.53%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGN-HHNHSHYPNSFFLRPKVICHGGALRRT 60
           MDSSATARRPYFIDEDDGLVSL+DVEAGISGN H+N++HYP+ F LRPK+ICHGGA RRT
Sbjct: 1   MDSSATARRPYFIDEDDGLVSLIDVEAGISGNLHNNNNHYPHPFVLRPKIICHGGAHRRT 60

Query: 61  TRNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQ 120
           TRNLSFSSSRISPRFYD RFEDHHHHFLEACFLCKKPLSDNKDIF+  GDTPFCSEECRQ
Sbjct: 61  TRNLSFSSSRISPRFYDARFEDHHHHFLEACFLCKKPLSDNKDIFI--GDTPFCSEECRQ 120

Query: 121 KQIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           +QIDMDEAKEKK+NLSSS+KAMRKKDQRKSTSPGKST DHDCRFRPGTVAAA
Sbjct: 121 RQIDMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTADHDCRFRPGTVAAA 170

[Close]

BLAST of Lsi05G000400 vs. ExPASy TrEMBL
Match: A0A0A0LIA5 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G911280 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80
Identity = 155/175 (88.57%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHH--NHSHYPNSFFLRPKVIC-HGGALR 60
           MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHH  N++HYP+ F LRPK+IC HGGA R
Sbjct: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNNNNNHYPHPFILRPKIICTHGGAQR 60

Query: 61  RTTRNLSFSSSR-ISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEE 120
           RTTRNLSFSSSR ISPRFYD RFEDHHHHFL+ACFLCKKPLSDNKDIFMYRGDTPFCSEE
Sbjct: 61  RTTRNLSFSSSRIISPRFYDARFEDHHHHFLKACFLCKKPLSDNKDIFMYRGDTPFCSEE 120

Query: 121 CRQKQIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           CRQ+QIDMDEAKEKK+NLSSS+KAMRKKDQRKSTSPGKST DHDC   PGTVAAA
Sbjct: 121 CRQRQIDMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTADHDC---PGTVAAA 172

[Close]

BLAST of Lsi05G000400 vs. ExPASy TrEMBL
Match: A0A6J1ICI7 (uncharacterized protein LOC111471819 OS=Cucurbita maxima OX=3661 GN=LOC111471819 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.7e-76
Identity = 147/171 (85.96%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNHSHYPNSFFLRPKVICHGGALRRTT 60
           MDSS  ARRPYFIDEDDGLVSLVDVEAGISGN   +SHYP  FF RP+ ICHGG  RR T
Sbjct: 1   MDSSVAARRPYFIDEDDGLVSLVDVEAGISGN--QNSHYPQPFFHRPR-ICHGGTHRRGT 60

Query: 61  RNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQK 120
           RNLS SSSR+S RFYD RFE HHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECR+K
Sbjct: 61  RNLSVSSSRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREK 120

Query: 121 QIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           QIDMDEAKEKKLNLSSS+KAMRKKDQRKSTSPGKSTT HDCRFR GTV AA
Sbjct: 121 QIDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA 168

[Close]

BLAST of Lsi05G000400 vs. ExPASy TrEMBL
Match: A0A6J1EYH1 (uncharacterized protein LOC111439605 OS=Cucurbita moschata OX=3662 GN=LOC111439605 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 9.7e-76
Identity = 147/171 (85.96%), Postives = 151/171 (88.30%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNHSHYPNSFFLRPKVICHGGALRRTT 60
           MDSS  ARRPYFIDEDDGLVSLVDVEAGISGN    SHYP  FF RP+ ICHGG  RR T
Sbjct: 1   MDSSVAARRPYFIDEDDGLVSLVDVEAGISGN--QSSHYPQPFFHRPR-ICHGGTHRRGT 60

Query: 61  RNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQK 120
           RNLS SSSR+S RFYD RFE HHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECR+K
Sbjct: 61  RNLSVSSSRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREK 120

Query: 121 QIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           QIDMDEAKEKKLNLSSS+KAMRKKDQRKSTSPGKSTT HDCRFR GTV AA
Sbjct: 121 QIDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA 168

[Close]

BLAST of Lsi05G000400 vs. ExPASy TrEMBL
Match: A0A6J1DNP1 (uncharacterized protein LOC111022896 OS=Momordica charantia OX=3673 GN=LOC111022896 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.7e-67
Identity = 139/172 (80.81%), Postives = 144/172 (83.72%), Query Frame = 0


Query: 3   SSATARRPYFIDEDDGLVSLVDVEAGISGNHHNHSHYP-NSFFLRPKVICHGGALRR--T 62
           SSATARRPYFID+DDGLVSLVDVEAG SG+   H HYP  SFFLRPK   HGGA RR   
Sbjct: 4   SSATARRPYFIDKDDGLVSLVDVEAGFSGS--QHGHYPAQSFFLRPKP-SHGGAHRRGAP 63

Query: 63  TRNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQ 122
            RNLS SS R S RFYD RFEDH+HHFLEACFLCKKPL DNKDIFMYRGDTPFCSEECR 
Sbjct: 64  PRNLSVSSPRFSARFYDARFEDHYHHFLEACFLCKKPLGDNKDIFMYRGDTPFCSEECRH 123

Query: 123 KQIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           KQI+ DEAKEKKLNLSSS+KAMRKKDQRKS SPGKST  HDCRFR  TVAAA
Sbjct: 124 KQIETDEAKEKKLNLSSSIKAMRKKDQRKSASPGKSTATHDCRFRTSTVAAA 172

[Close]

BLAST of Lsi05G000400 vs. NCBI nr
Match: XP_011652677.2 (FCS-Like Zinc finger 2 [Cucumis sativus] >KAE8651463.1 hypothetical protein Csa_000756 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 2.0e-83
Identity = 158/175 (90.29%), Postives = 166/175 (94.86%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHH--NHSHYPNSFFLRPKVIC-HGGALR 60
           MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHH  N++HYP+ F LRPK+IC HGGA R
Sbjct: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNNNNNHYPHPFILRPKIICTHGGAQR 60

Query: 61  RTTRNLSFSSSR-ISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEE 120
           RTTRNLSFSSSR ISPRFYD RFEDHHHHFL+ACFLCKKPLSDNKDIFMYRGDTPFCSEE
Sbjct: 61  RTTRNLSFSSSRIISPRFYDARFEDHHHHFLKACFLCKKPLSDNKDIFMYRGDTPFCSEE 120

Query: 121 CRQKQIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           CRQ+QIDMDEAKEKK+NLSSS+KAMRKKDQRKSTSPGKST DHDCRFRPGTVAAA
Sbjct: 121 CRQRQIDMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTADHDCRFRPGTVAAA 175

[Close]

BLAST of Lsi05G000400 vs. NCBI nr
Match: KAA0038523.1 (senescence-associated family protein [Cucumis melo var. makuwa] >TYK31120.1 senescence-associated family protein [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 154/172 (89.53%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGN-HHNHSHYPNSFFLRPKVICHGGALRRT 60
           MDSSATARRPYFIDEDDGLVSL+DVEAGISGN H+N++HYP+ F LRPK+ICHGGA RRT
Sbjct: 1   MDSSATARRPYFIDEDDGLVSLIDVEAGISGNLHNNNNHYPHPFVLRPKIICHGGAHRRT 60

Query: 61  TRNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQ 120
           TRNLSFSSSRISPRFYD RFEDHHHHFLEACFLCKKPLSDNKDIF+  GDTPFCSEECRQ
Sbjct: 61  TRNLSFSSSRISPRFYDARFEDHHHHFLEACFLCKKPLSDNKDIFI--GDTPFCSEECRQ 120

Query: 121 KQIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           +QIDMDEAKEKK+NLSSS+KAMRKKDQRKSTSPGKST DHDCRFRPGTVAAA
Sbjct: 121 RQIDMDEAKEKKMNLSSSIKAMRKKDQRKSTSPGKSTADHDCRFRPGTVAAA 170

[Close]

BLAST of Lsi05G000400 vs. NCBI nr
Match: XP_038888234.1 (FCS-Like Zinc finger 2-like [Benincasa hispida])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 154/173 (89.02%), Postives = 161/173 (93.06%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISG-NHHNHSHYPNSFFLRPKVICHGGALRR- 60
           MDSSATARRPYFIDEDDGLVSL+DVEAGISG NHHN++HYP+S FLRPK+I HGG  RR 
Sbjct: 1   MDSSATARRPYFIDEDDGLVSLIDVEAGISGNNHHNNNHYPHSSFLRPKLISHGGVHRRT 60

Query: 61  TTRNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECR 120
           TTRN SFSSSR SPRFYD RFEDHHHHFL+ACFLCKKPLSDNKDIFMYRGDTPFCSEECR
Sbjct: 61  TTRNPSFSSSRFSPRFYDARFEDHHHHFLDACFLCKKPLSDNKDIFMYRGDTPFCSEECR 120

Query: 121 QKQIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           QKQIDMDEAKEK LNLSSS+KAMRKKDQRKSTSPGKST DHDCRF PGTVAAA
Sbjct: 121 QKQIDMDEAKEKNLNLSSSIKAMRKKDQRKSTSPGKSTADHDCRFHPGTVAAA 173

[Close]

BLAST of Lsi05G000400 vs. NCBI nr
Match: XP_022973263.1 (uncharacterized protein LOC111471819 [Cucurbita maxima] >XP_023541050.1 uncharacterized protein LOC111801327 [Cucurbita pepo subsp. pepo] >KAG6571751.1 FCS-Like Zinc finger 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-75
Identity = 147/171 (85.96%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNHSHYPNSFFLRPKVICHGGALRRTT 60
           MDSS  ARRPYFIDEDDGLVSLVDVEAGISGN   +SHYP  FF RP+ ICHGG  RR T
Sbjct: 1   MDSSVAARRPYFIDEDDGLVSLVDVEAGISGN--QNSHYPQPFFHRPR-ICHGGTHRRGT 60

Query: 61  RNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQK 120
           RNLS SSSR+S RFYD RFE HHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECR+K
Sbjct: 61  RNLSVSSSRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREK 120

Query: 121 QIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           QIDMDEAKEKKLNLSSS+KAMRKKDQRKSTSPGKSTT HDCRFR GTV AA
Sbjct: 121 QIDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA 168

[Close]

BLAST of Lsi05G000400 vs. NCBI nr
Match: KAG7033613.1 (hypothetical protein SDJN02_03337, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-75
Identity = 147/171 (85.96%), Postives = 152/171 (88.89%), Query Frame = 0


Query: 1   MDSSATARRPYFIDEDDGLVSLVDVEAGISGNHHNHSHYPNSFFLRPKVICHGGALRRTT 60
           MDSS  ARRPYFIDEDDGLVSLVDVEAGISGN   +SHYP  FF RP+ ICHGG  RR T
Sbjct: 40  MDSSVAARRPYFIDEDDGLVSLVDVEAGISGN--QNSHYPQPFFHRPR-ICHGGTHRRGT 99

Query: 61  RNLSFSSSRISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQK 120
           RNLS SSSR+S RFYD RFE HHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECR+K
Sbjct: 100 RNLSVSSSRVSARFYDARFEHHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECREK 159

Query: 121 QIDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           QIDMDEAKEKKLNLSSS+KAMRKKDQRKSTSPGKSTT HDCRFR GTV AA
Sbjct: 160 QIDMDEAKEKKLNLSSSIKAMRKKDQRKSTSPGKSTTGHDCRFRAGTVLAA 207

[Close]

BLAST of Lsi05G000400 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-35
Identity = 89/180 (49.44%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 6   TARRPYFIDEDDG---LVSLVDVEAGISGNHHNHSHY--PNSFFLRPKVICHG--GALRR 65
           ++R+PYFI+E++      SL ++EAG SGN++N +++  P +  +      +G   +LR 
Sbjct: 4   SSRKPYFIEEEEEENLASSLSEMEAGFSGNNNNSNNHGNPQNGVVSSSRFSYGRLNSLRN 63

Query: 66  TT----RNLSFSSSR--ISPRFYDTRFEDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPF 125
           +        S SS R  +S RF+D RF+    HFL++CFLCKKPL DN+DI+MYRGDTPF
Sbjct: 64  SQSYYYNQYSVSSPRSVVSGRFHDFRFDIQQPHFLDSCFLCKKPLGDNRDIYMYRGDTPF 123

Query: 126 CSEECRQKQIDMDEAKEKKLNLSSSMK-AMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           CSEECRQ+QI+ DEAKEKK NLS S+K AMR+K+Q   +SP   T   D  F  GTVAAA
Sbjct: 124 CSEECRQEQIERDEAKEKKQNLSHSVKSAMRRKEQ---SSP---TRSRDYAFHNGTVAAA 177

[Close]

BLAST of Lsi05G000400 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 143.7 bits (361), Expect = 1.4e-34
Identity = 85/170 (50.00%), Postives = 114/170 (67.06%), Query Frame = 0


Query: 8   RRPYFI-DEDDGLVSLVDVEAGISGNHHNHSHYPNSFFLRPKVICHGGALRRTTRNLSFS 67
           R+PYFI +EDDG VSL ++EAG+S    +  +YP S++                   S S
Sbjct: 6   RKPYFIEEEDDGFVSLSEMEAGVSS--PSCYNYPQSYY-----------YNHHHHQYSVS 65

Query: 68  SSRISPRFYDTRFEDHHH-----HFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQ 127
           S R S +F+D RF++ ++     HFL++CFLCKK L DN+DIFMYRGDTPFCSEECR++Q
Sbjct: 66  SPR-SGKFHDFRFDNSYYGYGQPHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQ 125

Query: 128 IDMDEAKEKKLNLSSSMKAMRKKDQRKSTSPGKSTTDHDCRFRPGTVAAA 172
           I+ DEAKEKK +LS+S+KAMR+ ++R S+S    T   +  FR GTVAAA
Sbjct: 126 IERDEAKEKKQSLSTSVKAMRRNEKRSSSS--SPTRSRNYAFRTGTVAAA 159

[Close]

BLAST of Lsi05G000400 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0


Query: 85  HFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAKEKKLNLSSSMKAMRKK 144
           HFLE+C LC+K L  N DIFMYRGD  FCS ECR++QI+ DEAKE+K   SS  +++RK 
Sbjct: 15  HFLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKERKWKKSS--RSLRKN 74

Query: 145 DQRKSTSPGKSTTDHDCRFRPGTVAAA 172
                 S   +T       R GT+  A
Sbjct: 75  SSETKESAAGNTV------RTGTLVVA 93

[Close]

BLAST of Lsi05G000400 vs. TAIR 10
Match: AT1G22160.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 67.8 bits (164), Expect = 9.8e-12
Identity = 34/63 (53.97%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 70  ISPRFYDTRF-EDHHHHFLEACFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAK 129
           +SPR    R   D+   FL +C LCK+ L   +DI+MYRGD  FCS ECRQ+QI +DE K
Sbjct: 61  VSPRGTQRRHSSDYSEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERK 120

Query: 130 EKK 132
           EKK
Sbjct: 121 EKK 123

[Close]

BLAST of Lsi05G000400 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) )

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 40/129 (31.01%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 30  SGNHHNHSHYPNSFFLRPKVICHGGALRRTTRNLSFSSSRISPRFYDTRFEDHHHHFLEA 89
           + N++N +       + PKV+     +   T  ++  ++ +   + D+        FLE 
Sbjct: 21  NNNNNNKNPLSEGVLISPKVVNKANII--VTTAVTTDTTNLRRCYQDS-------GFLEH 80

Query: 90  CFLCKKPLSDNKDIFMYRGDTPFCSEECRQKQIDMDEAKEKKLNLSSSMKAMRKKDQRKS 149
           CFLC++ L   KDI+MY+GD  FCS ECR KQ+ MDE +  +    S M   +KK    +
Sbjct: 81  CFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDEEESLRREYCSLMDVKKKKFDSPA 140

Query: 150 TSPGKSTTD 159
           T+P +   D
Sbjct: 141 TAPSRYRRD 140

The following BLAST results are available for this feature:

BLAST of Lsi05G000400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGQ9	6.8e-34	49.44	FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1	[more]
Q8VZM9	2.0e-33	50.00	FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1	[more]
O80506	1.9e-12	48.28	FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1	[more]
Q8VY80	1.4e-10	53.97	FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1	[more]
Q9FH22	3.1e-10	31.01	FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1	[more]

BLAST of Lsi05G000400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E683	1.4e-82	89.53	Senescence-associated family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0LIA5	2.2e-80	88.57	FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G911280 PE...	[more]
A0A6J1ICI7	5.7e-76	85.96	uncharacterized protein LOC111471819 OS=Cucurbita maxima OX=3661 GN=LOC111471819...	[more]
A0A6J1EYH1	9.7e-76	85.96	uncharacterized protein LOC111439605 OS=Cucurbita moschata OX=3662 GN=LOC1114396...	[more]
A0A6J1DNP1	1.7e-67	80.81	uncharacterized protein LOC111022896 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of Lsi05G000400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011652677.2	2.0e-83	90.29	FCS-Like Zinc finger 2 [Cucumis sativus] >KAE8651463.1 hypothetical protein Csa_...	[more]
KAA0038523.1	2.9e-82	89.53	senescence-associated family protein [Cucumis melo var. makuwa] >TYK31120.1 sene...	[more]
XP_038888234.1	1.9e-81	89.02	FCS-Like Zinc finger 2-like [Benincasa hispida]	[more]
XP_022973263.1	1.2e-75	85.96	uncharacterized protein LOC111471819 [Cucurbita maxima] >XP_023541050.1 uncharac...	[more]
KAG7033613.1	1.2e-75	85.96	hypothetical protein SDJN02_03337, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Lsi05G000400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47060.1	4.8e-35	49.44	Protein of unknown function (DUF581)	[more]
AT4G17670.1	1.4e-34	50.00	Protein of unknown function (DUF581)	[more]
AT2G44670.1	1.4e-13	48.28	Protein of unknown function (DUF581)	[more]
AT1G22160.1	9.8e-12	53.97	Protein of unknown function (DUF581)	[more]
AT5G49120.1	2.2e-11	31.01	Protein of unknown function (DUF581)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..161
None	No IPR available	PANTHER	PTHR46057:SF39	SUBFAMILY NOT NAMED	coord: 6..171
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 78..128 e-value: 9.9E-26 score: 89.0
IPR007650	Zf-FLZ domain	PROSITE	PS51795	ZF_FLZ	coord: 85..129 score: 27.258881
IPR044533	FCS-Like Zinc finger 1/2/3	PANTHER	PTHR46057	FCS-LIKE ZINC FINGER 1-RELATED	coord: 6..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G000400.1	Lsi05G000400.1	mRNA