Lsi04G023230 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAATGAAGTAGAAGAAGAATTAATTAAGAAGATGATGAGCAAATCATCATTAGTTGAAGAAGATAATGAAGAAGTAGAAGAAGTTGAATGCAGGTGCTGTGGGATAAAAGAAGAATGCACAAAAGACTATATTTTAGAGGTCGAAAAATCCTTTTCAGGGAAATGGGTTTGTGGGCTTTGCTGTGAAGCTGTTAAAGAAAGAGTCTTGAAATTTCCCAACACAACCATTGATAAAGCTTTGGACTTTCACAGGGAGTTTTTTGATAGCTTCAATACAACTACAAGGCTCAATCCTAAACTCTCTTTAACCACTTCCATGAGAAAGATTGCTAGAAAAAGTTTTGAGAAACGCACCAATTATGATTTGGCCTCTTCCACCTCCATTAATAATACTAATAAGCTTTCTCGAAGCATTAGTTGTGATCCCAGAATTGGCCTTCAAGACCCTGCAGACTAA ATGGATAATGAAGTAGAAGAAGAATTAATTAAGAAGATGATGAGCAAATCATCATTAGTTGAAGAAGATAATGAAGAAGTAGAAGAAGTTGAATGCAGGTGCTGTGGGATAAAAGAAGAATGCACAAAAGACTATATTTTAGAGGTCGAAAAATCCTTTTCAGGGAAATGGGTTTGTGGGCTTTGCTGTGAAGCTGTTAAAGAAAGAGTCTTGAAATTTCCCAACACAACCATTGATAAAGCTTTGGACTTTCACAGGGAGTTTTTTGATAGCTTCAATACAACTACAAGGCTCAATCCTAAACTCTCTTTAACCACTTCCATGAGAAAGATTGCTAGAAAAAGTTTTGAGAAACGCACCAATTATGATTTGGCCTCTTCCACCTCCATTAATAATACTAATAAGCTTTCTCGAAGCATTAGTTGTGATCCCAGAATTGGCCTTCAAGACCCTGCAGACTAA ATGGATAATGAAGTAGAAGAAGAATTAATTAAGAAGATGATGAGCAAATCATCATTAGTTGAAGAAGATAATGAAGAAGTAGAAGAAGTTGAATGCAGGTGCTGTGGGATAAAAGAAGAATGCACAAAAGACTATATTTTAGAGGTCGAAAAATCCTTTTCAGGGAAATGGGTTTGTGGGCTTTGCTGTGAAGCTGTTAAAGAAAGAGTCTTGAAATTTCCCAACACAACCATTGATAAAGCTTTGGACTTTCACAGGGAGTTTTTTGATAGCTTCAATACAACTACAAGGCTCAATCCTAAACTCTCTTTAACCACTTCCATGAGAAAGATTGCTAGAAAAAGTTTTGAGAAACGCACCAATTATGATTTGGCCTCTTCCACCTCCATTAATAATACTAATAAGCTTTCTCGAAGCATTAGTTGTGATCCCAGAATTGGCCTTCAAGACCCTGCAGACTAA MDNEVEEELIKKMMSKSSLVEEDNEEVEEVECRCCGIKEECTKDYILEVEKSFSGKWVCGLCCEAVKERVLKFPNTTIDKALDFHREFFDSFNTTTRLNPKLSLTTSMRKIARKSFEKRTNYDLASSTSINNTNKLSRSISCDPRIGLQDPAD Homology
BLAST of Lsi04G023230 vs. ExPASy TrEMBL
Match: A0A1S3CRY2 (uncharacterized protein LOC103504007 OS=Cucumis melo OX=3656 GN=LOC103504007 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51 Identity = 116/156 (74.36%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of Lsi04G023230 vs. ExPASy TrEMBL
Match: A0A0A0LE54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895120 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49 Identity = 107/145 (73.79%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of Lsi04G023230 vs. ExPASy TrEMBL
Match: A0A6J1C661 (uncharacterized protein LOC111007738 OS=Momordica charantia OX=3673 GN=LOC111007738 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 3.7e-42 Identity = 93/148 (62.84%), Postives = 115/148 (77.70%), Query Frame = 0
BLAST of Lsi04G023230 vs. ExPASy TrEMBL
Match: A0A6J1FAH1 (uncharacterized protein LOC111443561 OS=Cucurbita moschata OX=3662 GN=LOC111443561 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.4e-41 Identity = 95/148 (64.19%), Postives = 117/148 (79.05%), Query Frame = 0
BLAST of Lsi04G023230 vs. ExPASy TrEMBL
Match: A0A6J1IGD0 (uncharacterized protein LOC111476691 OS=Cucurbita maxima OX=3661 GN=LOC111476691 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 1.2e-40 Identity = 91/146 (62.33%), Postives = 115/146 (78.77%), Query Frame = 0
BLAST of Lsi04G023230 vs. NCBI nr
Match: XP_038899593.1 (uncharacterized protein LOC120086851 [Benincasa hispida]) HSP 1 Score: 231.1 bits (588), Expect = 6.4e-57 Identity = 124/152 (81.58%), Postives = 133/152 (87.50%), Query Frame = 0
BLAST of Lsi04G023230 vs. NCBI nr
Match: XP_008466651.1 (PREDICTED: uncharacterized protein LOC103504007 [Cucumis melo]) HSP 1 Score: 212.6 bits (540), Expect = 2.4e-51 Identity = 116/156 (74.36%), Postives = 130/156 (83.33%), Query Frame = 0
BLAST of Lsi04G023230 vs. NCBI nr
Match: KAE8651411.1 (hypothetical protein Csa_002275 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 2.9e-49 Identity = 107/145 (73.79%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of Lsi04G023230 vs. NCBI nr
Match: XP_031739128.1 (uncharacterized protein LOC116402862 [Cucumis sativus]) HSP 1 Score: 205.7 bits (522), Expect = 2.9e-49 Identity = 107/145 (73.79%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of Lsi04G023230 vs. NCBI nr
Match: XP_022135903.1 (uncharacterized protein LOC111007738 [Momordica charantia]) HSP 1 Score: 181.0 bits (458), Expect = 7.6e-42 Identity = 93/148 (62.84%), Postives = 115/148 (77.70%), Query Frame = 0
BLAST of Lsi04G023230 vs. TAIR 10
Match: AT2G25780.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 119.8 bits (299), Expect = 1.9e-27 Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 0
BLAST of Lsi04G023230 vs. TAIR 10
Match: AT3G22540.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18 Identity = 44/111 (39.64%), Postives = 66/111 (59.46%), Query Frame = 0
BLAST of Lsi04G023230 vs. TAIR 10
Match: AT1G79770.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 79.3 bits (194), Expect = 2.9e-15 Identity = 48/121 (39.67%), Postives = 62/121 (51.24%), Query Frame = 0
BLAST of Lsi04G023230 vs. TAIR 10
Match: AT1G72510.1 (Protein of unknown function (DUF1677) ) HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14 Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 0
BLAST of Lsi04G023230 vs. TAIR 10
Match: AT1G72510.2 (Protein of unknown function (DUF1677) ) HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14 Identity = 50/141 (35.46%), Postives = 79/141 (56.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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