Lsi04G023220 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G023220
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like
Location	chr04: 30422607 .. 30428790 (+)
RNA-Seq Expression	Lsi04G023220
Synteny	Lsi04G023220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATTTGTAACTTTTAAAAATATCATTTGCAATTAAGGAAAAGGCAGCAAAGAGGGGACCCGTCCAGTCGGCCCGTTTGGGTATTTCTTTTCGACGAGGGAACTGGAAGTACTCTTCGGTCCAAAAATCGAGTAACAGTAAACAATGGAGCGTCTCCGTCCGAGAGGCAGACAGATGTTTTCTGGGTTTACCAAGGGGGAGGTAGCAATCTCATTCATGTCTCATAGGGTCCGAGCTTTTGTTTGATTATCTCGGTGTTGCTGGATTTCTAATGTCAAAGTATAACTTCAAAGTACGGTCTCTCACCGTCTGTGTTGCGCAGGGCGTTTATATGCATTATGTTTATGGTTTTTCGATGATCATGCCCGAAGTATCTTTTGATGTTTCGGGGCGCAATGGAAGCTACAACGTAACTTCTTTTGATGTGTGAACTATTGCATAATTTGTAAAATTACGTCAATAGTTAATGATTGCTGAAGGGACTTAATTTTATTTTTGCGATTAAGTGTTCTTTATCTTTCAACATATTTCATTAGCAAACAGGAAGGGTTGAGGTCGTATAATTTTCGCTTTTCTTTAATTTCTGTTCTTCGGTTTATTGGCCTCTTCGGTGTTCCACCATATATCGGTTCCCTAACTCTAACATTTCAAGTATTAACTTACCATGTTCTGTACCAAAAACTTGATGTTAGGGCATATTTAAGCCTTTTTATTTGTATTCTTCTACATTTGAAAGGTGAGACGAGAGAGAATTATAAGTTAGGAATCAACTATCAAGTATCAACTATTTTTTCTCCCCATACTGGGAAAGGATTACGACGTCAAGGTCATTCTGCCTCAGAAAGCATGTCTCCTTAAACTTATCGAGGCTCAAAATTTTAGCATCTTCTTACAAAATATTGTACTCAGAAACATAACCTTGTACAAAACAACAAAGAGAAAGTGATTATTCCTTATTTTTTCGTCACAATGAAAAATAGTTTCGCAAATGTGAATTTAGCCCTTTGAGATTTTTTTTTCATGATCTTCAGGGTTCTGATGGCTTATTTATTTCTCTTTCATTTTATACCCTACACAGAATCCATAACATGAATTTAGATTTTTTTTTGTCTACAATTTAGAATTTCTTTTTGGGTCGAGAGTTTGTTGTACATACCTTTTATAATGTAACAGGAAGATTCATTTTATTTTTCCCACCCCCTCGGGTTTAACCCCTGCAAACAGATAGAGAAAATGGAGAAATTGCTAGATGAATCAGGAGAACAATCGCTTAATCGAGAATTTTGTCAAAAAGTTACAAAACGTTTCAAGTGAGTTTCATTTATTTTTGCTATCATAAAACTTTTAATTTATTTTTTAATATGTATATGACGTATGTATAATGTCGAGTTCTCTTGTTTTGGCATTCTATGTCTATACAGTCGGTCCTCCGGTCGTGCTGGGAAGCCTGTTATAAAGTGGACGGAGGTTGTCACATTTTTTATTATTTGTTTTTTCTGTTGTTTTTGAAATATTATTCTACTTCCACAGTTGTATATCTTGCAAGTAGGACTTGATAAGCATTTTTTTATGGGCCTTTGGAAAACGTTGTGGAGATTCCTGGCGGAAGAGAGATTCATTGTGGTACAAGCTTACATTGAGTGTTCAGGATCGCATCTTAATTCTTAATTTTCGGGACTTCTCCCTGAATTGGGTTAGTGGGAGGGTCCTCCAACCCTTGGAGAAGGATAAAAGAGTATTCATATTGAACATCTCTTAGATTGAGACTCTTGTTGCTACTCTATTCTTCAAACTAAAGCCAATTTTGGGAAGTCCTTCTCTAGTTTCCTGACTTGAGGTTGGGTGATACCTCCTCTCCCCCTTTTATATATTGATTTTTGCTTCATTGAAGTTCTACGTTTCCTATCTGAAGTATTATCCAGTCCACTTGTTCCTTCACTTGTGGTCCCCTTTGCCCTAAATCGTTGTCTTCAAGTTGAATTTCTTGCACTTTCTCTTGTTGGAAAGATCAAATCTGACAACTCTATTCACAGGAGGTATGCTACTTGCAACCTTTGTAGTGCATTTGTTCAATTTGATTGCAAAGCTCAGAATTTCTTGATACTTAATTGCCTCTTTTCTCATGACATTTGGTGCTAAATCCTGTAGGTCGTTCTTGTGAGTTCTGCATTCAAATTTGTTTCAGAGTGCTCTCCTGAGGAAATGCTTAGTAACTTGTATTTTTGTGGAAGGGTTGTACTCTGGCAGGGTATTTTGGTCACTAGTGGGTATTTGGCAGGAGAAGAATAAAACGTTTTTTGAAGCTTGATTTTTCAGTGGGGTTAGGTTTGGAGTCTTGCACCACTGAAAGTCTCCCCTAATTACAACAGTAGTCCTATATAGGTCTCCTGAGATGTTTCCCTTTTCTTTTTCCTTTCCCTTCTTCTCCGCATTTACTGTTCTTTATCCGGCCATCTTTTTTATTTTCATCTTTGAGAATAAAGGTCAGGTGAAAATTTGTCTTCATACAATGTTTATAGGTATACGATTGGTTGCAAAGCAGAGTGCAAGACTTACCAAAAATTGAAAAGAGGATGTCTGAAATTCCCAATGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAAGGCCCTGAAGGTAATTTGAGTTAAGCTCTTGCCTCTAGTGTTTTTTAAGGCAAAGTTACTCGGCTGTAGGGGAGTTTAATGTATGTTTGGACATACATTAAACAATAGTTTCACTTGGAACAATTTGAATGATGCTTTGGAGTGATGTACAATTTGAATTTATTTAGGTTATGTTTGCCTCCAATTGAATATGTTTGCTCTTTTTCATTGATGAATGAAATCTTAAAGAAATTTGGTGCAACAGAAACAATAGTTGTTGAAAGGGCAAGAAGGAAAGTGTATCCCCTGAGAGTCAGTATTGTATGGGTTGGATATATATGTCGTTAGGGAGGATGTGAGATAGAGGTAGGAATGAGATTAGGTTGTAGTTTGGGAAGGTTTGGGTTGTAGATGGTGGCTAGCCTCTCAAGCTGGTTAGGCATATATCCTTTAAGGTGTGCATTTGCACCCTCTTGAGCTCACTTTTAGTAATTAATAGTTTGGACCTAACATTAAGTTACATATTAAGAAATGCTTAATTCTCATCTGCATAATAACATCTCTTCCATTAAGTGCACTGGTGTAATGCATGGAGTAGGGGCAGGTTGAGGCAATATTTACATCTGGTATTTTGGTTGTCCTTGGACTTGAGATCTTTTGTCCTCTCTTCCATGGTCTTTTTTAAGATAAGGTTGCTTGATTGGTTGTTTATTACTGTAGTTATATTGTGCCTATTAGTTAATTGCACGTTCCTCCTTTTTCCTTTTTTCCTTCTAGTTTTTCTATCGAGTAGTTGAACCATGTAACATTAGAATATGGAATTAACTACCATAGGTTGGCGTTGTGGTCCTTGGATCAAGTGAAAAAACATTAGGTATTTTGTGGGAGTGGGTTCATATTCACGGTGTCCTAACTCCTAGGATATTAAAGTTCTATGAGTTTCTTGACAACTAAATATGGTAAAGGTCTAATAGTTGTCTTGTGAAATTAGTTAGTGTTTGTAAGCTGCAGTGGATACTCACACTCCTAATTTTTTTTTAAAAAAAAGCAAATGGGATTGAAATGCATTGTTTTACTTTATTTTTATTTCAATGAATTTATGCAGATGTGAGGTTTTTTTTTTTCCTCCTCCACATACTAATGATCTTTAGTTAAAAGCAGGTGACAAGAGCCCAGATTTGTCCGAGTTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTACGTGAAGAAATCACTACTGTTAATTTTGATTTATAAAGTTGGATCTGTCTGGTTTGGTGCTTGTCTTGGTATTTGCTCTGATGGTCTTTAATTAAGCTAAGAAACACATGCTTGAATTCATGCCTTTACGGATTGCATATGGCTCGCTATGGATATCGGCAGATAGAAGAGTGAGTAATCTAGATAGACAGGATAATTTAAACAATCTTTGAGTTTCAATTTGCCCAACCCTTCAAGCAGACAATCTCATCCTTTACTTGAGCATTTTCGAGGTTTGATTCAAAATTAATCTTTCTTTTGCCTAGCTCTCTCTTAGCTATGAATCGGAGGTGGTGCTTTGGAAATAAGGAACAGGAGTTGCAAGGGAAAAATGAAAATATCGAGGATTGATTAAAAGTGCGGGATTGACCTAGTATATTGTATGTAGTCGGCTCTCTCTCTTATGGAGCTTTTCTTGATGACAGGCTCTCTTAAACTCCTTAGCTTCCCCTACCAGATCTGGTATCTGGTCCTCTGTTCTATTTTGTTATGGTATCTGTTTCTTATCATGAACAAGCTGTAAGAAGGGAAAACAGCAAATAAATTCTCTATGAAGTAAGAATTGGGAAGTTAAGATACACGCTGATTGCATGTCTATGTAGCCATTTAAAATCATACTACCAGTGTTATTACCTAGTAGCTGCTATTGAAAAAGAATTCCTTTTAGTTTAGTGCAATGCTATTTGGATTCATAGGAATGGTTATTTGTGTATGATTTGTATGTTTCAGTATAATATCTCAAAATAACATGCCTCTAGGCTCTAATTCAGTCGGCTCCTCACAACAAGCAGGCTGCCTGTTGAATTTAATTAGAAAATTTTCTCTCTGTATCTGATTGTAAATTGTAATAGATTAAAGGTTGAGCGTGGTTGCTACCTGCATGAAGGAGATGATTTTAGTACGAAACTTTGTTCCCTTCAGGTTGTGAAGGGGGAAAAAATAAAACAGAAAAGAATGGAAACTCTATGTTGGTTTTAGGTGAAGCTGTATTTATGGTTTCTGCTGGTTCGTTTATCCATTTCAAATTTTTCTGGGGTTCTGATGGCATTCCACTAATATTATGCAGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGTTCTGGCGAAGCTGTGAGTCTTTGAACCATGACATTTTTTTCGTCTGGTATTATGATTTATCATGCCTTCCATTTTTCACAGAGTACATCAATTTGTTGAACCAAGTAAACTCATTGTTCCTATAGGCATCTAGGTTGTAGATGAATGAGTACTTTCCTGAGGAACACACTTAAAGTTATACTTAGATGGATGTGCATATGATACGAGTATCCCGAGTATAATTGCATGCTTGCTTTCATTTGTGGATGGGATGTATACTTGTCTGATTGGTTTTGCCAATTCATTAAAGGAAGTGCGTGTCAGATTTGTCGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGGCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGTCAGAAGGTGAAGGTTGGGGACCTTGTACTCTGCTTCCAGGTGACTATTCATGTCTAACCATTTGGACGACCTTTAGATTGTTCATTTCTCTGTAGTCCACTTCATCTTAGTGTTAAAATTTGTAGGAGAGGAGAGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTGCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGGTTCGTTATGACCACGATAGCACTGAGGCAAGTATCGTTTTCTTATGCTTTGTCAATCTCTAGTTTCAGCTTTTGAAGGAGTTCTCAATATTCAATACTGACATCTACTCGTCAAATTACCAGGAAAAAGTTCGTTTGAGAAGATTATGTCGCAGACCGGCACATCAAATCTGATCTTTGTCTTTGACATCAATTCATCACATATCTGTGTCATTCCCATTTCTAAGCTGGAGACATGAATGGTTTGCCTCAGAAAGCACAATAGCTAAAGCTAGTTTTGTCTGTTGTTTCATTTCAGACATGTGAGGAAATGTTGTGTGTAAAATCTCATAATAGAATGTGGTTTCATGTTTTCACCTTATTGTTTGTGTGTCCGAAAAAAAACCTTGGGAACAAGAATATGGGACACCCACATGTAATTGTTGCATATTCTCTGTCTTTTGCAAATCGGGCAAAGCCGAGTTCAAAGTTTAAGTAGGCTTTCAAATCTCTCTGCCCATCACTTGCAAATCTCTAACCTTTTTAATATGGTAAATCATTTTGGATCATTTGCTAGCATTTACAAATTTGTAATATGTTATCTCCTTCAACT

mRNA sequence

TATATTTGTAACTTTTAAAAATATCATTTGCAATTAAGGAAAAGGCAGCAAAGAGGGGACCCGTCCAGTCGGCCCGTTTGGGTATTTCTTTTCGACGAGGGAACTGGAAGTACTCTTCGGTCCAAAAATCGAGTAACAGTAAACAATGGAGCGTCTCCGTCCGAGAGGCAGACAGATGTTTTCTGGGTTTACCAAGGGGGAGGAAGATTCATTTTATTTTTCCCACCCCCTCGGGTTTAACCCCTGCAAACAGATAGAGAAAATGGAGAAATTGCTAGATGAATCAGGAGAACAATCGCTTAATCGAGAATTTTGTCAAAAAGTTACAAAACGTTTCAATCGGTCCTCCGGTCGTGCTGGGAAGCCTGTTATAAAGTGGACGGAGGTCGTTCTTGTGAGTTCTGCATTCAAATTTGTTTCAGAGTGCTCTCCTGAGGAAATGCTTAGTAACTTGTATTTTTGTGGAAGGGTTGTACTCTGGCAGGGTATTTTGGTCACTAGTGGAGTGCAAGACTTACCAAAAATTGAAAAGAGGATGTCTGAAATTCCCAATGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAAGGCCCTGAAGGTGACAAGAGCCCAGATTTGTCCGAGTTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGTTCTGGCGAAGCTGAAGTGCGTGTCAGATTTGTCGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGGCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGTCAGAAGGTGAAGGTTGGGGACCTTGTACTCTGCTTCCAGGAGAGGAGAGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTGCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGGTTCGTTATGACCACGATAGCACTGAGGCAAGAAAAAGTTCGTTTGAGAAGATTATGTCGCAGACCGGCACATCAAATCTGATCTTTGTCTTTGACATCAATTCATCACATATCTGTGTCATTCCCATTTCTAAGCTGGAGACATGAATGGTTTGCCTCAGAAAGCACAATAGCTAAAGCTAGTTTTGTCTGTTGTTTCATTTCAGACATGTGAGGAAATGTTGTGTGTAAAATCTCATAATAGAATGTGGTTTCATGTTTTCACCTTATTGTTTGTGTGTCCGAAAAAAAACCTTGGGAACAAGAATATGGGACACCCACATGTAATTGTTGCATATTCTCTGTCTTTTGCAAATCGGGCAAAGCCGAGTTCAAAGTTTAAGTAGGCTTTCAAATCTCTCTGCCCATCACTTGCAAATCTCTAACCTTTTTAATATGGTAAATCATTTTGGATCATTTGCTAGCATTTACAAATTTGTAATATGTTATCTCCTTCAACT

Coding sequence (CDS)

ATGGAGCGTCTCCGTCCGAGAGGCAGACAGATGTTTTCTGGGTTTACCAAGGGGGAGGAAGATTCATTTTATTTTTCCCACCCCCTCGGGTTTAACCCCTGCAAACAGATAGAGAAAATGGAGAAATTGCTAGATGAATCAGGAGAACAATCGCTTAATCGAGAATTTTGTCAAAAAGTTACAAAACGTTTCAATCGGTCCTCCGGTCGTGCTGGGAAGCCTGTTATAAAGTGGACGGAGGTCGTTCTTGTGAGTTCTGCATTCAAATTTGTTTCAGAGTGCTCTCCTGAGGAAATGCTTAGTAACTTGTATTTTTGTGGAAGGGTTGTACTCTGGCAGGGTATTTTGGTCACTAGTGGAGTGCAAGACTTACCAAAAATTGAAAAGAGGATGTCTGAAATTCCCAATGCTTGCCCTTCAAATAAGACTCAGGAAAGTTCTCAAGGCCCTGAAGGTGACAAGAGCCCAGATTTGTCCGAGTTGGAATTTGAAGCAAGGTCATCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACGCATAGATTTCTTAGTTCTGGCGAAGCTGAAGTGCGTGTCAGATTTGTCGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGGCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGTCAGAAGGTGAAGGTTGGGGACCTTGTACTCTGCTTCCAGGAGAGGAGAGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTGCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGGTTCGTTATGACCACGATAGCACTGAGGCAAGAAAAAGTTCGTTTGAGAAGATTATGTCGCAGACCGGCACATCAAATCTGATCTTTGTCTTTGACATCAATTCATCACATATCTGTGTCATTCCCATTTCTAAGCTGGAGACATGA

Protein sequence

MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSGVQDLPKIEKRMSEIPNACPSNKTQESSQGPEGDKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEARKSSFEKIMSQTGTSNLIFVFDINSSHICVIPISKLET

Homology

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BLAST of Lsi04G023220 vs. ExPASy Swiss-Prot
Match: Q9XI47 (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.2e-46
Identity = 107/267 (40.07%), Postives = 151/267 (56.55%), Query Frame = 0


Query: 19  EEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKW 78
           ++ S YF+         +I  ME L  E G+QSL+++FCQ V   F+ S  R GK  I W
Sbjct: 5   DDSSHYFTE----FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITW 64

Query: 79  TEV-VLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSGVQDLPKIEKRMSEIPNA 138
            +V +      K  S+   + + S                       P ++      P++
Sbjct: 65  KQVQIWFQEKLKHQSQPKSKTLPS-----------------------PPLQIHDLSNPSS 124

Query: 139 CPSNKTQESSQG------PEGDKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAE 198
             SN +  +  G          K+ DL++L FEA+S++D AWYDV+ FLT+R L +GE E
Sbjct: 125 YASNASNATFVGNSTFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELE 184

Query: 199 VRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHI 258
           VRVRF GF    DEWVN+K +VRERS+P+E SEC +V VGDL+LCFQER DQA+Y D H+
Sbjct: 185 VRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHV 244

Query: 259 VEVQRRMHDIRGCRCLFLVRYDHDSTE 279
           + ++R +HD   C C+FLVRY+ D+TE
Sbjct: 245 LNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Lsi04G023220 vs. ExPASy Swiss-Prot
Match: Q8RWJ7 (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.0e-43
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 0


Query: 36  QIEKMEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECS 95
           ++ +ME +L +       R   + +  +F+ S  R GK V+++ ++       ++     
Sbjct: 18  EVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRAR 77

Query: 96  PEEMLSNLYFCGRVVLWQGILVTSGVQDL--PKIEKRMSEIPNACPSNKTQESSQGPEGD 155
             +    L       +     + S +Q L  PK       +P   P+         P G 
Sbjct: 78  GNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPA---------PSGS 137

Query: 156 KSP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEW 215
             P       D S LEFEA+S++DGAWYDV  FL HR L  G+ EV+VRF GF  EEDEW
Sbjct: 138 LVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEW 197

Query: 216 VNIKQAVRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRC 275
           +N+K+ VR+RS+P E SEC  V  GDLVLCFQE +DQA+Y+DA +++ QRR HD+RGCRC
Sbjct: 198 INVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRC 257

Query: 276 LFLVRYDHDSTE 279
            FLVRY HD +E
Sbjct: 258 RFLVRYSHDQSE 260

[Close]

BLAST of Lsi04G023220 vs. ExPASy TrEMBL
Match: A0A1S3CQD7 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503608 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 5.4e-112
Identity = 218/280 (77.86%), Postives = 224/280 (80.00%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQMFSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQKV
Sbjct: 1   MERLRPRGRQMFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTE                            V  W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTE----------------------------VYDW----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPEGDKSPDLSELEFEARSSKDGAWYDVAMFL 180
           +QDLPKIEKRMSEIP ACPSNKTQESSQGPEG+KSPDLSELEFEARSSKDGAWYDVAMFL
Sbjct: 121 LQDLPKIEKRMSEIPKACPSNKTQESSQGPEGEKSPDLSELEFEARSSKDGAWYDVAMFL 180

Query: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQER 240
           THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK GDLVLCFQER
Sbjct: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQER 231

Query: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEAR 281
           RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTE +
Sbjct: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEEK 231

[Close]

BLAST of Lsi04G023220 vs. ExPASy TrEMBL
Match: A0A5A7TB77 (Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001550 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.3e-110
Identity = 221/298 (74.16%), Postives = 227/298 (76.17%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQMFSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQKV
Sbjct: 1   MERLRPRGRQMFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTEVV                             W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTEVVYD---------------------------W----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPE--------------GDKSPDLSELEFEAR 180
           +QDLPKIEKRMSEIP ACPSNKTQESSQGPE              G+KSPDLSELEFEAR
Sbjct: 121 LQDLPKIEKRMSEIPKACPSNKTQESSQGPEVCMEQGQVEAILTSGEKSPDLSELEFEAR 180

Query: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240
           SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ
Sbjct: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240

Query: 241 KVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEARKSSF 285
           KVK GDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEA   S+
Sbjct: 241 KVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEASHFSY 250

[Close]

BLAST of Lsi04G023220 vs. ExPASy TrEMBL
Match: A0A1S3CQD5 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503608 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 4.2e-109
Identity = 218/294 (74.15%), Postives = 224/294 (76.19%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQMFSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQKV
Sbjct: 1   MERLRPRGRQMFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTE                            V  W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTE----------------------------VYDW----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPE--------------GDKSPDLSELEFEAR 180
           +QDLPKIEKRMSEIP ACPSNKTQESSQGPE              G+KSPDLSELEFEAR
Sbjct: 121 LQDLPKIEKRMSEIPKACPSNKTQESSQGPEVCMEQGQVEAILTSGEKSPDLSELEFEAR 180

Query: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240
           SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ
Sbjct: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240

Query: 241 KVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEAR 281
           KVK GDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTE +
Sbjct: 241 KVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEEK 245

[Close]

BLAST of Lsi04G023220 vs. ExPASy TrEMBL
Match: A0A6J1IMF0 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476568 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.2e-106
Identity = 209/280 (74.64%), Postives = 216/280 (77.14%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPR RQMFSGFTKGE                 I KMEKL++ESGEQ L+R+FCQKV
Sbjct: 1   MERLRPRDRQMFSGFTKGE-----------------IAKMEKLIEESGEQLLDRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKW E                            V  W      S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWME----------------------------VYDW----FESR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPEGDKSPDLSELEFEARSSKDGAWYDVAMFL 180
           +QD PKIEKRMSEIP ACPSNKTQESSQGPEG K PDLSELEFEARSSKDGAWYDVAMFL
Sbjct: 121 LQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFL 180

Query: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQER 240
           THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK GDLVLCFQER
Sbjct: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQER 231

Query: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEAR 281
           RDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDHDSTE +
Sbjct: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEK 231

[Close]

BLAST of Lsi04G023220 vs. ExPASy TrEMBL
Match: A0A6J1F8P9 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111443145 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 2.6e-106
Identity = 208/280 (74.29%), Postives = 216/280 (77.14%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPR RQMFSGFTKGE                 I KMEKL++ESGEQ L+R+FCQKV
Sbjct: 1   MERLRPRDRQMFSGFTKGE-----------------IAKMEKLIEESGEQLLDRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKW E                            V  W      S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWME----------------------------VYDW----FESR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPEGDKSPDLSELEFEARSSKDGAWYDVAMFL 180
           +QD PKIEKRMSEIP ACPSNKTQESSQGPEG K PDLSELEFEARSSKDGAWYDVAMFL
Sbjct: 121 LQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFL 180

Query: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQER 240
           THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VRERSVPLEHSECQKVK GDLVLCFQER
Sbjct: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVKAGDLVLCFQER 231

Query: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEAR 281
           RDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDHDSTE +
Sbjct: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEEK 231

[Close]

BLAST of Lsi04G023220 vs. NCBI nr
Match: XP_008466074.1 (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-111
Identity = 218/280 (77.86%), Postives = 224/280 (80.00%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQMFSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQKV
Sbjct: 1   MERLRPRGRQMFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTE                            V  W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTE----------------------------VYDW----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPEGDKSPDLSELEFEARSSKDGAWYDVAMFL 180
           +QDLPKIEKRMSEIP ACPSNKTQESSQGPEG+KSPDLSELEFEARSSKDGAWYDVAMFL
Sbjct: 121 LQDLPKIEKRMSEIPKACPSNKTQESSQGPEGEKSPDLSELEFEARSSKDGAWYDVAMFL 180

Query: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQER 240
           THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK GDLVLCFQER
Sbjct: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQER 231

Query: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEAR 281
           RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTE +
Sbjct: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEEK 231

[Close]

BLAST of Lsi04G023220 vs. NCBI nr
Match: KAA0038625.1 (protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 409.5 bits (1051), Expect = 2.7e-110
Identity = 221/298 (74.16%), Postives = 227/298 (76.17%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQMFSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQKV
Sbjct: 1   MERLRPRGRQMFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTEVV                             W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTEVVYD---------------------------W----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPE--------------GDKSPDLSELEFEAR 180
           +QDLPKIEKRMSEIP ACPSNKTQESSQGPE              G+KSPDLSELEFEAR
Sbjct: 121 LQDLPKIEKRMSEIPKACPSNKTQESSQGPEVCMEQGQVEAILTSGEKSPDLSELEFEAR 180

Query: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240
           SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ
Sbjct: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240

Query: 241 KVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEARKSSF 285
           KVK GDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEA   S+
Sbjct: 241 KVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEASHFSY 250

[Close]

BLAST of Lsi04G023220 vs. NCBI nr
Match: XP_038898496.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 406.4 bits (1043), Expect = 2.3e-109
Identity = 213/280 (76.07%), Postives = 221/280 (78.93%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQMFSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQ+V
Sbjct: 1   MERLRPRGRQMFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQRV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTE                            V  W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTE----------------------------VYDW----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPEGDKSPDLSELEFEARSSKDGAWYDVAMFL 180
           +QD PKIE R+SEIP ACPSNKTQESSQGPEG+KSPDLSELEFEARSSKDGAWYDVAMFL
Sbjct: 121 LQDFPKIENRISEIPKACPSNKTQESSQGPEGEKSPDLSELEFEARSSKDGAWYDVAMFL 180

Query: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQER 240
           THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK GDLVLCFQER
Sbjct: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKAGDLVLCFQER 231

Query: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEAR 281
           RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHD TE +
Sbjct: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDGTEEK 231

[Close]

BLAST of Lsi04G023220 vs. NCBI nr
Match: XP_004136226.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 404.8 bits (1039), Expect = 6.7e-109
Identity = 213/278 (76.62%), Postives = 221/278 (79.50%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQ FSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQKV
Sbjct: 1   MERLRPRGRQTFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTE                            V  W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTE----------------------------VYDW----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPEGDKSPDLSELEFEARSSKDGAWYDVAMFL 180
           +QDLPKIEKR+SEIP ACPSNKTQESSQGPE +KSPDLSELEFEARSSKDGAWYDVAMFL
Sbjct: 121 LQDLPKIEKRISEIPKACPSNKTQESSQGPEDEKSPDLSELEFEARSSKDGAWYDVAMFL 180

Query: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQER 240
           THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEH+ECQKVK GDLVLCFQER
Sbjct: 181 THRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHTECQKVKTGDLVLCFQER 229

Query: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTE 279
           RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHD+TE
Sbjct: 241 RDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDNTE 229

[Close]

BLAST of Lsi04G023220 vs. NCBI nr
Match: XP_008466073.1 (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 404.4 bits (1038), Expect = 8.8e-109
Identity = 218/294 (74.15%), Postives = 224/294 (76.19%), Query Frame = 0


Query: 1   MERLRPRGRQMFSGFTKGEEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKV 60
           MERLRPRGRQMFSGFTKGE                 IEKMEKLL+ESGEQSLNR+FCQKV
Sbjct: 1   MERLRPRGRQMFSGFTKGE-----------------IEKMEKLLEESGEQSLNRDFCQKV 60

Query: 61  TKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSG 120
           TKRFNRSSGRAGKPVIKWTE                            V  W    + S 
Sbjct: 61  TKRFNRSSGRAGKPVIKWTE----------------------------VYDW----LQSR 120

Query: 121 VQDLPKIEKRMSEIPNACPSNKTQESSQGPE--------------GDKSPDLSELEFEAR 180
           +QDLPKIEKRMSEIP ACPSNKTQESSQGPE              G+KSPDLSELEFEAR
Sbjct: 121 LQDLPKIEKRMSEIPKACPSNKTQESSQGPEVCMEQGQVEAILTSGEKSPDLSELEFEAR 180

Query: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240
           SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ
Sbjct: 181 SSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQ 240

Query: 241 KVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEAR 281
           KVK GDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTE +
Sbjct: 241 KVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTEEK 245

[Close]

BLAST of Lsi04G023220 vs. TAIR 10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-47
Identity = 107/267 (40.07%), Postives = 151/267 (56.55%), Query Frame = 0


Query: 19  EEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKW 78
           ++ S YF+         +I  ME L  E G+QSL+++FCQ V   F+ S  R GK  I W
Sbjct: 5   DDSSHYFTE----FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITW 64

Query: 79  TEV-VLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSGVQDLPKIEKRMSEIPNA 138
            +V +      K  S+   + + S                       P ++      P++
Sbjct: 65  KQVQIWFQEKLKHQSQPKSKTLPS-----------------------PPLQIHDLSNPSS 124

Query: 139 CPSNKTQESSQG------PEGDKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAE 198
             SN +  +  G          K+ DL++L FEA+S++D AWYDV+ FLT+R L +GE E
Sbjct: 125 YASNASNATFVGNSTFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELE 184

Query: 199 VRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHI 258
           VRVRF GF    DEWVN+K +VRERS+P+E SEC +V VGDL+LCFQER DQA+Y D H+
Sbjct: 185 VRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHV 244

Query: 259 VEVQRRMHDIRGCRCLFLVRYDHDSTE 279
           + ++R +HD   C C+FLVRY+ D+TE
Sbjct: 245 LNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Lsi04G023220 vs. TAIR 10
Match: AT1G15215.3 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 187.6 bits (475), Expect = 1.6e-47
Identity = 107/267 (40.07%), Postives = 151/267 (56.55%), Query Frame = 0


Query: 19  EEDSFYFSHPLGFNPCKQIEKMEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKW 78
           ++ S YF+         +I  ME L  E G+QSL+++FCQ V   F+ S  R GK  I W
Sbjct: 5   DDSSHYFTE----FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITW 64

Query: 79  TEV-VLVSSAFKFVSECSPEEMLSNLYFCGRVVLWQGILVTSGVQDLPKIEKRMSEIPNA 138
            +V +      K  S+   + + S                       P ++      P++
Sbjct: 65  KQVQIWFQEKLKHQSQPKSKTLPS-----------------------PPLQIHDLSNPSS 124

Query: 139 CPSNKTQESSQG------PEGDKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAE 198
             SN +  +  G          K+ DL++L FEA+S++D AWYDV+ FLT+R L +GE E
Sbjct: 125 YASNASNATFVGNSTFVQTRKGKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELE 184

Query: 199 VRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHI 258
           VRVRF GF    DEWVN+K +VRERS+P+E SEC +V VGDL+LCFQER DQA+Y D H+
Sbjct: 185 VRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHV 244

Query: 259 VEVQRRMHDIRGCRCLFLVRYDHDSTE 279
           + ++R +HD   C C+FLVRY+ D+TE
Sbjct: 245 LNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Lsi04G023220 vs. TAIR 10
Match: AT1G15215.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 186.0 bits (471), Expect = 4.6e-47
Identity = 103/246 (41.87%), Postives = 143/246 (58.13%), Query Frame = 0


Query: 40  MEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKWTEV-VLVSSAFKFVSECSPEE 99
           ME L  E G+QSL+++FCQ V   F+ S  R GK  I W +V +      K  S+   + 
Sbjct: 1   MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 60

Query: 100 MLSNLYFCGRVVLWQGILVTSGVQDLPKIEKRMSEIPNACPSNKTQESSQG------PEG 159
           + S                       P ++      P++  SN +  +  G         
Sbjct: 61  LPS-----------------------PPLQIHDLSNPSSYASNASNATFVGNSTFVQTRK 120

Query: 160 DKSPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQA 219
            K+ DL++L FEA+S++D AWYDV+ FLT+R L +GE EVRVRF GF    DEWVN+K +
Sbjct: 121 GKASDLADLAFEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTS 180

Query: 220 VRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRY 279
           VRERS+P+E SEC +V VGDL+LCFQER DQA+Y D H++ ++R +HD   C C+FLVRY
Sbjct: 181 VRERSIPVEPSECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRY 223

[Close]

BLAST of Lsi04G023220 vs. TAIR 10
Match: AT3G18380.2 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 179.9 bits (455), Expect = 3.3e-45
Identity = 102/267 (38.20%), Postives = 143/267 (53.56%), Query Frame = 0


Query: 36  QIEKMEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECS 95
           ++ +ME +L +       R   + +  +F+ S  R GK V+++ ++       ++     
Sbjct: 18  EVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRAR 77

Query: 96  PEEMLSNLYFCGRVVLWQGILVTSGVQDL--PKIEKRMSEIPNACPSNKTQESSQGPEGD 155
             +    L       +     + S +Q L  PK       +P   P+         P G 
Sbjct: 78  GNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPA---------PSGS 137

Query: 156 KSP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEW 215
             P       D S LEFEA+S++DGAWYDV  FL HR L  G+ EV+VRF GF  EEDEW
Sbjct: 138 LVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEW 197

Query: 216 VNIKQAVRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRC 275
           +N+K+ VR+RS+P E SEC  V  GDLVLCFQE +DQA+Y+DA +++ QRR HD+RGCRC
Sbjct: 198 INVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRC 257

Query: 276 LFLVRYDHDSTEARKSSFEKIMSQTGT 294
            FLVRY HD +E       KI  +  T
Sbjct: 258 RFLVRYSHDQSEQEIVPLRKICRRPET 275

[Close]

BLAST of Lsi04G023220 vs. TAIR 10
Match: AT3G18380.1 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 178.7 bits (452), Expect = 7.3e-45
Identity = 99/252 (39.29%), Postives = 139/252 (55.16%), Query Frame = 0


Query: 36  QIEKMEKLLDESGEQSLNREFCQKVTKRFNRSSGRAGKPVIKWTEVVLVSSAFKFVSECS 95
           ++ +ME +L +       R   + +  +F+ S  R GK V+++ ++       ++     
Sbjct: 18  EVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYALRAR 77

Query: 96  PEEMLSNLYFCGRVVLWQGILVTSGVQDL--PKIEKRMSEIPNACPSNKTQESSQGPEGD 155
             +    L       +     + S +Q L  PK       +P   P+         P G 
Sbjct: 78  GNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPA---------PSGS 137

Query: 156 KSP-------DLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEW 215
             P       D S LEFEA+S++DGAWYDV  FL HR L  G+ EV+VRF GF  EEDEW
Sbjct: 138 LVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEW 197

Query: 216 VNIKQAVRERSVPLEHSECQKVKVGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRC 275
           +N+K+ VR+RS+P E SEC  V  GDLVLCFQE +DQA+Y+DA +++ QRR HD+RGCRC
Sbjct: 198 INVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRC 257

Query: 276 LFLVRYDHDSTE 279
            FLVRY HD +E
Sbjct: 258 RFLVRYSHDQSE 260

The following BLAST results are available for this feature:

BLAST of Lsi04G023220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI47	2.2e-46	40.07	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]
Q8RWJ7	1.0e-43	39.29	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]

BLAST of Lsi04G023220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CQD7	5.4e-112	77.86	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7TB77	1.3e-110	74.16	Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 OS=Cucumis melo var. ...	[more]
A0A1S3CQD5	4.2e-109	74.15	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1IMF0	1.2e-106	74.64	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1F8P9	2.6e-106	74.29	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X4 OS=Cucurbita moschata OX=3...	[more]

BLAST of Lsi04G023220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466074.1	1.1e-111	77.86	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo]	[more]
KAA0038625.1	2.7e-110	74.16	protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 [Cucumis melo var. ma...	[more]
XP_038898496.1	2.3e-109	76.07	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Benincasa hispida]	[more]
XP_004136226.1	6.7e-109	76.62	protein SAWADEE HOMEODOMAIN HOMOLOG 1 isoform X1 [Cucumis sativus]	[more]
XP_008466073.1	8.8e-109	74.15	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Cucumis melo]	[more]

BLAST of Lsi04G023220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15215.2	1.6e-47	40.07	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.3	1.6e-47	40.07	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.1	4.6e-47	41.87	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT3G18380.2	3.3e-45	38.20	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT3G18380.1	7.3e-45	39.29	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 160..283 e-value: 1.3E-43 score: 148.4
None	No IPR available	GENE3D	2.30.30.140		coord: 220..291 e-value: 3.8E-31 score: 108.6
None	No IPR available	GENE3D	2.40.50.40		coord: 158..219 e-value: 1.0E-32 score: 114.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..160
None	No IPR available	PANTHER	PTHR33827:SF3	OS09G0346900 PROTEIN	coord: 9..280
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 9..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G023220.1	Lsi04G023220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding