Lsi04G020460 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G020460
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	mediator-associated protein 2
Location	chr04: 27568659 .. 27573182 (-)
RNA-Seq Expression	Lsi04G020460
Synteny	Lsi04G020460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAACCCTAGACCCTACCTTTGATCTTCTCCCTCACTCTCACGTGTCCCACTTCTTATACTTCCCGCCAGCTTTTCCTTCCTTCCAGCAGCTCAGTGTCGCCGCCCCTCTCTCCGTTTCAGTGCTGCCGCTGCCGTATTTCTTTCTCTCGTCCCGCCGGGGCCTTCCTCCTACTGGATTGTACTGATTGTCTACTCCCCTGTTGGTACTGTATTCTTTCAATCTCCATTTATGTCTTTTTTCTCACTTGAAAAATCAAATTAGGGCTTCTCTAATGAAACAAACGGGAAGTTGTTTTGATTCTTTGTTTTTTCCCCTAACAACAATAGCAGAATAGCCACGAAAAAGAAATCAGCCTGCGGCAAATTATTTTAGTCCTCCTTGCAAAATGTAAGAACTAAACCCGGCAGATCCTCTTGCAAAATGTCTATTCTCTCAACAATACTTAGTAGGAGTCTCTATTTTCGTCCTCCTGCCACACAGCTCTCCTCTGAACGTTTTCTTTGGTTATTTTGTCATTAACCGTCTAGATTTTTAAGTTGAATCTGAAACAGAGTAAAAGAATTGCGTTATTTGACGAAATGCCCGGAGTTTTCAATTGGTTGCGGCTTTTTCTTCTTTTTCTCCATTCCGTTATACGATATTAGAGTGTTGTGTCGTTGCTTGTTGGTACAGGGACTTAATTAGCTCTGAGTATGAGTAACGAGGTTGATGCTTTTAAAAGTGTAGAAGGCTACAAACCTCCAGCAGAGTTTGAGGAAGACAAAAGGGAGTTTCTTACTGATATTTCTTTGTCTGACTGCGCAGAGCTCTGGCTTATTCAATGGCCTGCTAACCAAGTAAGATATTATAAACTAATCTAGAAAAATATTAAATATTATAACTACCTGCAGTTTGGGATCCTTTTTTTTTTTTTTTTTTTAATTTTTTTTTTTTTAAGATTGTTCGTTGCAGCCATTTCAAATACTGTTTAACTTGAGAGGGATTTATCCTTTTTATTTAATGGGTATTGTAGGCCTCGGATTTTGATGGGCAAGAATTTTCTCTTCAACTTCATCCAGATGGACATTTGGGCAGCTTTCAGAGTTCATCTGGTAACTATCATTCTGTCAGTGATTTGCATTTTTTTTAAAGAAACAATTTCAATGATGTTTGAAATTCACTAAATGATATACAATCCATGGAATTACAACAAGCTATCCCAATTGTTTAGAAGCATATGAATACGAAGCAAAAAGATTAGAACTTTTACACCAAGAAATAGCATTATAAATAACAAGATCAAGGAAGGCGTCAAAAGGATGATCCTTATCCATGAAGTCTCTTTGATTTCTTTCCTTCCATAGTACCCAAAAGAAAGTATAAGATATATGCAGCCACAAAAAAGCTTTTGTATTCTTGAACAGGTGACTCAAGAGAATGGAGTTGAGGTGTGTAGTAACTTCTCTAGGAAAAGCCAAAACTATGCAAAAGCATCGCAAAGTTTACTCCAGAGTTTCCGGGTAAAAGAACAATGGAGGAAGAGGTGATTTTGTTATTCATTATCAGTTCTGCACAAAGAACACCACCCTGGAGAACATCATTGGCATTAATGGCCTTGTGAGCCAATTCTCATTTCTTGGGGTATTTGTCTTTCCATATTCCTCTAGCCAAAGATGTCTCCAAAATGTTGTTTCTATCACCCATATCAGCTAATAGAGGTAGAAAAGTGTCCAACAGGATTGAGAGGCCATTTTCAAGCATTTATCGGCTGTGAGAGGGTGATTGGGGCTAAGACCATGTTGAGGTCTCAAAAGTTGTTATTGCCATTCTCGTCCTCACCCAAGATTGAGGTCTCTATAGTTGTGATTGGCATTCCAAGTCTCTTTCTTAGTGGCTGTTTTCCAGTGGGGTAATCTGTATAGAAGTGGGTGTCTCGAGGACAAGGGTTGCCTGTTTACCCATGGGCCTGTTCAGAAAAGGGTGGAGGCGTTGCCTACTTGGTGTTGAACTCTTCTGGTGATGAGTTCTTGCTGCTTGACGATATTTTCCCCTGGCCCTTTTGTGATGCTAATGAAGCCCAATTTAGGTGAGATGCTGAACCATATTTTATCTTTAACAAGGTTCCTCCATAAAACATCCTTTTTGTGCTTATATCTCTAGATCCACTTAGCAAGAAGAGCATGGTTTTTATCTCTCATTGGGTACACCCGAGGCCTCTTTGATCAATAGGATGAATAGGTTTAGACCAATTAACATGATGCTGTCCTTTGCCATTTTGCTCACCATCCCATAGGAAATTCCTGAATAATCTTTCAATCTCTTTGCTAATCTTTATAGGCAAGAGAAGAATCGATAGGTGTATGTCGGGAGATTTGAAAGTGTAGCTTGTATGAGAGTGAGCCTTCCCCTTTAGATGAAAAGGTGGATCCCCATGTCGATAATCTTCTCTTAATTTTTTCAACCATTGCCCAGTGTCCAAAAAGAGATGGCTTTTGGCAAACCGTGTAATGGGAGACCGAAGTAAGAATTGGGCCAATCACCCCTTTTGCATCCATATTTCAAAGCCAATTCCTCAATGATGTCCAGTTCAACATTGATACCGATAATTTGGACTTTTGGAGGTTGATATTTATGCCACGATGCCTTCTCAAAAGCTTCAATCTCATTAAGAAGGTGAGTGAAATGTAGCTTGTCATCAAAATCAGAGAAAAGATTGTCAGTGACAGACTATGAGGACAATCTTCTTGACATCCATTTTTCTTGACTCGTTGAATTAATCTCTTATCAATTTTTTCAAATAACAGTTGGTGCATGAATATGCTTGAAGTATTTTTGTTTGAATGTGATTACATCAATTCTATTCATTTTCTTTGTACAATAATTTCAATCTATTTTTTGTTTTCATCGAAAGGAAAATCATATGATGTGGTCAGCCGTGTGTCTCAAGAACCTGAAGCATCTGTTTTTCTACCATCTTCATCAGACACCAGATTAGGTAAAAGCCCCTCTTTCTGTCAGAGTAAATTTCTATGTATTTCGATTTTTTTAATCCAAAAAAATAGAAACTTCATTTTGAATCTGTTTTACTTCACATGTTAGTATCATCAGTCTCTTCATTGCAGCTACATTCTCTTTTTCTCTCTTTTTCCTTTTTGTCATACCTGGCTGGACTTAATCTGCACCAGTTCTGCTCCCCATTCGAGCTTTGTTTTCAAAGTTCCTATATTCTATAGATTAGGAGATGGTAGTCTACTAGTTTAGTTTCACTTTCAATACTAATGACGTTATGCCTAGACTTCTACATCCCCAGTGATTTTGATTCGTCTGTTCTCACATGCCGGTATTCATCTATTAGTGTGGTCTTGAATTTTTAATATACTCCTTCCATAGTCAACAGCTGTCGTTTAGTTGCTGGTTCTTCAATTACAAGTCTCAACATTTTATTTTTTTAGTTCCGAGTAGTCTTAACATCTTACTTTTTTAGTTCTGAGTAGTCTTCAACATTTTATTAGTGAGCTGTAATATGCTAATACTACATTAAGCTTTCTTTCCTGTATAAATGCGTTGGAATACAAACGAACAATATTGATACTTCATGAGTTCATGCATCTCAATTCAAGTCCAACGTCTTCTCGATGTTTGTTCACACCACATCATATTCTCGTGGCATGGTCCTTATTATGCGAGCAGATCCACCATTCATTTTGGTATCAACTCATCTTCCCCTGATAAAATTGTCCTATTTTTTTCATGTTCTTTTACCCTCGAAGTCGGAAAGATTTCCCGGCGGATATCTCTTGTGCATTACCCAGAACCTGAAGAATTCGAAAAGACCACCCCTATTAAATCATTGTATCAGAAAGCTTCTGGAATTTCATTGACCACTTCTCGTCAAACTACAACATCCAGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGCAAACCTAGAAGTTCAGTATCTGAATATGAGGAACCAGAACCTAGCGAGTCCAGAGATCATCTGAAAAAGGATTCATCGAAAAGAAAACGCAGACAAGAACCTAGTAGATCAATCGACCACTCAACTCAAGATTCAGGTCGTGGTCATAGTGCAGTAACTATTTCAGGGTCCGCCGAGCAATCTAGTGAAGGTAAATCAAAAAAGCAAAAGAAATGAATGAGGTTTCTGCAAACTTGAAGTATGTTCATTAGTTTTTGACAGGTTACTAAAGTGTGTCTATACTCTTATTTTCCATTTTCTTTTGCTTGGACTGAATTCTGGAGCAGTTGTACGTCATAGCCCATGGGAAGTTCTTTCTCAAGATTAGATATAGTATCAGTATCAGTTATATTGATTACTTATTAATTAATGTTAATTTTGAATTAATAGTAAATGTTTATTAATTCTCTTAAGAGAATATGCATTAAACAGTTGAGTTATGGTTAAATTTATCAGTTGTAAATTAAGGTGGATTTTGTGATAGATTTGATTCGATATTTGATTCTTATAAATTTGATGTATGGTGCCTGTCACCTGCATTCATTCG

mRNA sequence

AGGAAACCCTAGACCCTACCTTTGATCTTCTCCCTCACTCTCACGTGTCCCACTTCTTATACTTCCCGCCAGCTTTTCCTTCCTTCCAGCAGCTCAGTGTCGCCGCCCCTCTCTCCGTTTCAGTGCTGCCGCTGCCGTATTTCTTTCTCTCGTCCCGCCGGGGCCTTCCTCCTACTGGATTGTACTGATTGTCTACTCCCCTGTTGGTACTGTATTCTTTCAATCTCCATTTATGTCTTTTTTCTCACTTGAAAAATCAAATTAGGGCTTCTCTAATGAAACAAACGGGAAGTTGTTTTGATTCTTTGTTTTTTCCCCTAACAACAATAGCAGAATAGCCACGAAAAAGAAATCAGCCTGCGGCAAATTATTTTAGTCCTCCTTGCAAAATGGACTTAATTAGCTCTGAGTATGAGTAACGAGGTTGATGCTTTTAAAAGTGTAGAAGGCTACAAACCTCCAGCAGAGTTTGAGGAAGACAAAAGGGAGTTTCTTACTGATATTTCTTTGTCTGACTGCGCAGAGCTCTGGCTTATTCAATGGCCTGCTAACCAAGCCTCGGATTTTGATGGGCAAGAATTTTCTCTTCAACTTCATCCAGATGGACATTTGGGCAGCTTTCAGAGTTCATCTGGTAACTATCATTCTGTGACTCAAGAGAATGGAGTTGAGGTGTGTAGTAACTTCTCTAGGAAAAGCCAAAACTATGCAAAAGCATCGCAAAGTTTACTCCAGAGTTTCCGGCCAAAGATGTCTCCAAAATGTTGTTTCTATCACCCATATCAGCTAATAGAGGTAGAAAAGTGTCCAACAGGATTGAGAGGCCATTTTCAAGCATTTATCGGCTGTGAGAGGGTGATTGGGGCTAAGACCATGTTGAGGTCTCAAAAGTTGTTATTGCCATTCTCGTCCTCACCCAAGATTGAGAAGTGGGTGTCTCGAGGACAAGGGTTGCCTGTTTACCCATGGGCCTGTTCAGAAAAGGGTGGAGGCGTTGCCTACTTGGTGTTGAACTCTTCTGGTGATGAGTTCTTGCTGCTTGACGATATTTTCCCCTGGCCCTTTTGTGATGCTAATGAAGCCCAATTTAGCCGTGTGTCTCAAGAACCTGAAGCATCTGTTTTTCTACCATCTTCATCAGACACCAGATTAGTCGGAAAGATTTCCCGGCGGATATCTCTTGTGCATTACCCAGAACCTGAAGAATTCGAAAAGACCACCCCTATTAAATCATTGTATCAGAAAGCTTCTGGAATTTCATTGACCACTTCTCGTCAAACTACAACATCCAGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGCAAACCTAGAAGTTCAGTATCTGAATATGAGGAACCAGAACCTAGCGAGTCCAGAGATCATCTGAAAAAGGATTCATCGAAAAGAAAACGCAGACAAGAACCTAGTAGATCAATCGACCACTCAACTCAAGATTCAGGTCGTGGTCATAGTGCAGTAACTATTTCAGGGTCCGCCGAGCAATCTAGTGAAGGTAAATCAAAAAAGCAAAAGAAATGAATGAGGTTTCTGCAAACTTGAAGTATGTTCATTAGTTTTTGACAGGTTACTAAAGTGTGTCTATACTCTTATTTTCCATTTTCTTTTGCTTGGACTGAATTCTGGAGCAGTTGTACGTCATAGCCCATGGGAAGTTCTTTCTCAAGATTAGATATAGTATCAGTATCAGTTATATTGATTACTTATTAATTAATGTTAATTTTGAATTAATAGTAAATGTTTATTAATTCTCTTAAGAGAATATGCATTAAACAGTTGAGTTATGGTTAAATTTATCAGTTGTAAATTAAGGTGGATTTTGTGATAGATTTGATTCGATATTTGATTCTTATAAATTTGATGTATGGTGCCTGTCACCTGCATTCATTCG

Coding sequence (CDS)

ATGAGTAACGAGGTTGATGCTTTTAAAAGTGTAGAAGGCTACAAACCTCCAGCAGAGTTTGAGGAAGACAAAAGGGAGTTTCTTACTGATATTTCTTTGTCTGACTGCGCAGAGCTCTGGCTTATTCAATGGCCTGCTAACCAAGCCTCGGATTTTGATGGGCAAGAATTTTCTCTTCAACTTCATCCAGATGGACATTTGGGCAGCTTTCAGAGTTCATCTGGTAACTATCATTCTGTGACTCAAGAGAATGGAGTTGAGGTGTGTAGTAACTTCTCTAGGAAAAGCCAAAACTATGCAAAAGCATCGCAAAGTTTACTCCAGAGTTTCCGGCCAAAGATGTCTCCAAAATGTTGTTTCTATCACCCATATCAGCTAATAGAGGTAGAAAAGTGTCCAACAGGATTGAGAGGCCATTTTCAAGCATTTATCGGCTGTGAGAGGGTGATTGGGGCTAAGACCATGTTGAGGTCTCAAAAGTTGTTATTGCCATTCTCGTCCTCACCCAAGATTGAGAAGTGGGTGTCTCGAGGACAAGGGTTGCCTGTTTACCCATGGGCCTGTTCAGAAAAGGGTGGAGGCGTTGCCTACTTGGTGTTGAACTCTTCTGGTGATGAGTTCTTGCTGCTTGACGATATTTTCCCCTGGCCCTTTTGTGATGCTAATGAAGCCCAATTTAGCCGTGTGTCTCAAGAACCTGAAGCATCTGTTTTTCTACCATCTTCATCAGACACCAGATTAGTCGGAAAGATTTCCCGGCGGATATCTCTTGTGCATTACCCAGAACCTGAAGAATTCGAAAAGACCACCCCTATTAAATCATTGTATCAGAAAGCTTCTGGAATTTCATTGACCACTTCTCGTCAAACTACAACATCCAGAGGCCCACACTCGAGCAGTAGAAGAACAAGCTCTACACGAAGTAGCAAACCTAGAAGTTCAGTATCTGAATATGAGGAACCAGAACCTAGCGAGTCCAGAGATCATCTGAAAAAGGATTCATCGAAAAGAAAACGCAGACAAGAACCTAGTAGATCAATCGACCACTCAACTCAAGATTCAGGTCGTGGTCATAGTGCAGTAACTATTTCAGGGTCCGCCGAGCAATCTAGTGAAGGTAAATCAAAAAAGCAAAAGAAATGA

Protein sequence

MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQLHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCFYHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQGLPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKSLYQKASGISLTTSRQTTTSRGPHSSSRRTSSTRSSKPRSSVSEYEEPEPSESRDHLKKDSSKRKRRQEPSRSIDHSTQDSGRGHSAVTISGSAEQSSEGKSKKQKK

Homology

[Close]

BLAST of Lsi04G020460 vs. ExPASy TrEMBL
Match: A0A0A0L047 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 8.8e-77
Identity = 200/391 (51.15%), Postives = 216/391 (55.24%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPPAEFEEDKREFLTDISL+D  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LHPDGH+GSFQ SSG  + V                                        
Sbjct: 61  LHPDGHMGSFQGSSGKSYDV---------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                  I C                                  
Sbjct: 121 -----------------------ISC---------------------------------- 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                           V+QEPEASVFLP
Sbjct: 181 ------------------------------------------------VAQEPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEKTT-PIKSLYQKASGISLTTSRQTTTSRGPHSS 300
           SSSDTRLVGKISRRISLVHYPEPEE EK T P+KSLYQK+SGISLT SRQTTTSRGPHSS
Sbjct: 241 SSSDTRLVGKISRRISLVHYPEPEELEKATIPLKSLYQKSSGISLTNSRQTTTSRGPHSS 246

Query: 301 SRRTSSTRSSKPRSSVSEYEEP----------EPSESRDHLKKDSSKRKRRQEPSRSIDH 360
           SRRT+S+RSSKPRSSVSE+ EP          E +ESRDH +KDSSKRKR  EPSRSIDH
Sbjct: 301 SRRTTSSRSSKPRSSVSEFTEPSKTSSVKQELESTESRDHKRKDSSKRKRLHEPSRSIDH 246

Query: 361 STQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           ST+DSG G+SAVT SGSAE+SSEGKSKKQKK
Sbjct: 361 STRDSGHGNSAVTSSGSAERSSEGKSKKQKK 246

[Close]

BLAST of Lsi04G020460 vs. ExPASy TrEMBL
Match: A0A5A7VNG7 (Mediator-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001600 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 6.3e-75
Identity = 198/391 (50.64%), Postives = 214/391 (54.73%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPPAEFEED+REFLTDISL+D  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDRREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LHPDGH+GSFQ SSG  + V                                        
Sbjct: 61  LHPDGHMGSFQGSSGKSYDV---------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                  I C                                  
Sbjct: 121 -----------------------ISC---------------------------------- 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                           V+QEPEASVFLP
Sbjct: 181 ------------------------------------------------VAQEPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEK-TTPIKSLYQKASGISLTTSRQTTTSRGPHSS 300
           SSSDTRLVGKISRRISLVHYPEPEE EK TT +KSL QK+SGISLT SRQTTTSRGP SS
Sbjct: 241 SSSDTRLVGKISRRISLVHYPEPEELEKATTSLKSLCQKSSGISLTNSRQTTTSRGPQSS 246

Query: 301 SRRTSSTRSSKPRSSVSEYEEP----------EPSESRDHLKKDSSKRKRRQEPSRSIDH 360
           SRRT+S+RSSKPRSSVSE+EEP          + +ESRDH KKDSSKRKR  EPSRSIDH
Sbjct: 301 SRRTTSSRSSKPRSSVSEFEEPWKPSSVKQELKSTESRDHQKKDSSKRKRSHEPSRSIDH 246

Query: 361 STQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           ST+DSG  HSAVT SGSAE+SSEGKSKKQKK
Sbjct: 361 STRDSGHSHSAVTSSGSAERSSEGKSKKQKK 246

[Close]

BLAST of Lsi04G020460 vs. ExPASy TrEMBL
Match: A0A1S3CLF4 (mediator-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103501782 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 6.3e-75
Identity = 198/391 (50.64%), Postives = 214/391 (54.73%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPPAEFEED+REFLTDISL+D  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDRREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LHPDGH+GSFQ SSG  + V                                        
Sbjct: 61  LHPDGHMGSFQGSSGKSYDV---------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                  I C                                  
Sbjct: 121 -----------------------ISC---------------------------------- 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                           V+QEPEASVFLP
Sbjct: 181 ------------------------------------------------VAQEPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEK-TTPIKSLYQKASGISLTTSRQTTTSRGPHSS 300
           SSSDTRLVGKISRRISLVHYPEPEE EK TT +KSL QK+SGISLT SRQTTTSRGP SS
Sbjct: 241 SSSDTRLVGKISRRISLVHYPEPEELEKATTSLKSLCQKSSGISLTNSRQTTTSRGPQSS 246

Query: 301 SRRTSSTRSSKPRSSVSEYEEP----------EPSESRDHLKKDSSKRKRRQEPSRSIDH 360
           SRRT+S+RSSKPRSSVSE+EEP          + +ESRDH KKDSSKRKR  EPSRSIDH
Sbjct: 301 SRRTTSSRSSKPRSSVSEFEEPWKPSSVKQELKSTESRDHQKKDSSKRKRSHEPSRSIDH 246

Query: 361 STQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           ST+DSG  HSAVT SGSAE+SSEGKSKKQKK
Sbjct: 361 STRDSGHSHSAVTSSGSAERSSEGKSKKQKK 246

[Close]

BLAST of Lsi04G020460 vs. ExPASy TrEMBL
Match: A0A6J1J1C8 (LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480436 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 183/392 (46.68%), Postives = 201/392 (51.28%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MSN+V A KSVEGYKPP EFEED REFLTDISLSD  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
             PDGHLGSFQ SSG  + V                                        
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVV--------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                         S V+QEPEASVFLP
Sbjct: 181 ----------------------------------------------SCVAQEPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKSLYQKASGISLTT-SRQTTTSRGPHSS 300
           SSSDTRLVGKI+RRISLVHYPEPEE EK TP+KS+Y+K+SG+SLTT SR TTTSRGPHSS
Sbjct: 241 SSSDTRLVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSS 247

Query: 301 SRRTSSTRSSKPRSSVSE----------YEEPEPSESRDHLKKDSSKRKRRQEPS-RSID 360
           SRRTSSTRSSKPRSS+SE           +EPEPSESRD+LKKDSSKRKR  +PS R  +
Sbjct: 301 SRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKDSSKRKRXHKPSDRPTN 247

Query: 361 HSTQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           HSTQD G    A T SG +  SSE K+KK+K+
Sbjct: 361 HSTQDEGCDPCAATFSGPSRLSSECKTKKKKQ 247

[Close]

BLAST of Lsi04G020460 vs. ExPASy TrEMBL
Match: A0A6J1CDR9 (mediator-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111010319 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 7.2e-63
Identity = 178/387 (45.99%), Postives = 192/387 (49.61%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MSNE  AFK  E YKP  EFEED RE L DISLSD  ELWLIQWPANQ  DFDGQEFSLQ
Sbjct: 1   MSNEFGAFKRAEEYKPAPEFEEDDRELLADISLSDSTELWLIQWPANQPPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LH DGHLGSFQ SSG  + V                                        
Sbjct: 61  LHHDGHLGSFQGSSGKSYDVV--------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                         S V+QEPEASVFLP
Sbjct: 181 ----------------------------------------------SCVAQEPEASVFLP 239

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKSLYQKASGISLTTSRQTTTSRGPHSSS 300
           SSSDT+LVGKISRRISLVHYPEPEE E+ T +KS +QK+SGISLTTS + TTSR PHSSS
Sbjct: 241 SSSDTKLVGKISRRISLVHYPEPEELEQATAMKSAFQKSSGISLTTSSRQTTSRTPHSSS 239

Query: 301 RRTSSTRSSKPRSSVSEYE----------EPEPSESRDHLKKDSSKRKRRQEPSRSIDHS 360
           RRTS   SSKPRSSVSEYE          EPEPSES+DHLKKDSSKRK   EPSRS D S
Sbjct: 301 RRTS---SSKPRSSVSEYEEPSKPSSRKREPEPSESKDHLKKDSSKRKHAHEPSRSTDRS 239

Query: 361 TQDSGRGHSAVTISGSAEQSSEGKSKK 378
           TQ+ GR HSAVT SG++ QSSEGK+K+
Sbjct: 361 TQNLGRSHSAVTFSGASGQSSEGKTKR 239

[Close]

BLAST of Lsi04G020460 vs. NCBI nr
Match: XP_038896123.1 (mediator-associated protein 2 [Benincasa hispida])

HSP 1 Score: 299.7 bits (766), Expect = 3.6e-77
Identity = 200/390 (51.28%), Postives = 212/390 (54.36%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           M NEVDAF SVEGYKPPAEFEEDKREFLTDISLS+  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MINEVDAFISVEGYKPPAEFEEDKREFLTDISLSNSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LHPDG LGSFQ SSG  + V                                        
Sbjct: 61  LHPDGRLGSFQGSSGKSYDVV--------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                         S ++Q PEASVFLP
Sbjct: 181 ----------------------------------------------SCLAQVPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKSLYQKASGISLTTSRQTTTSRGPHSSS 300
           SSSDTRLVGKISRRISLVHYPEPEE EK TP+KSLYQK+SG SLT SRQTTTSRGPHSSS
Sbjct: 241 SSSDTRLVGKISRRISLVHYPEPEELEKATPMKSLYQKSSGTSLTNSRQTTTSRGPHSSS 245

Query: 301 RRTSSTRSSKPRSSVSEYE----------EPEPSESRDHLKKDSSKRKRRQEPSRSIDHS 360
           RRTSS+RSSKPRSSVSE+E          EPEP+ESRD+LKKDSSKR R  +PSRSIDHS
Sbjct: 301 RRTSSSRSSKPRSSVSEFEEPSKPSIVKQEPEPTESRDYLKKDSSKRNRTHDPSRSIDHS 245

Query: 361 TQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           T DSGRGHSAVT SGS E+SSEGKSKKQKK
Sbjct: 361 TPDSGRGHSAVTSSGSTERSSEGKSKKQKK 245

[Close]

BLAST of Lsi04G020460 vs. NCBI nr
Match: XP_004146046.1 (mediator-associated protein 2 [Cucumis sativus] >XP_031740697.1 mediator-associated protein 2 [Cucumis sativus] >KGN55103.1 hypothetical protein Csa_012926 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 1.8e-76
Identity = 200/391 (51.15%), Postives = 216/391 (55.24%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPPAEFEEDKREFLTDISL+D  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDKREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LHPDGH+GSFQ SSG  + V                                        
Sbjct: 61  LHPDGHMGSFQGSSGKSYDV---------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                  I C                                  
Sbjct: 121 -----------------------ISC---------------------------------- 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                           V+QEPEASVFLP
Sbjct: 181 ------------------------------------------------VAQEPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEKTT-PIKSLYQKASGISLTTSRQTTTSRGPHSS 300
           SSSDTRLVGKISRRISLVHYPEPEE EK T P+KSLYQK+SGISLT SRQTTTSRGPHSS
Sbjct: 241 SSSDTRLVGKISRRISLVHYPEPEELEKATIPLKSLYQKSSGISLTNSRQTTTSRGPHSS 246

Query: 301 SRRTSSTRSSKPRSSVSEYEEP----------EPSESRDHLKKDSSKRKRRQEPSRSIDH 360
           SRRT+S+RSSKPRSSVSE+ EP          E +ESRDH +KDSSKRKR  EPSRSIDH
Sbjct: 301 SRRTTSSRSSKPRSSVSEFTEPSKTSSVKQELESTESRDHKRKDSSKRKRLHEPSRSIDH 246

Query: 361 STQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           ST+DSG G+SAVT SGSAE+SSEGKSKKQKK
Sbjct: 361 STRDSGHGNSAVTSSGSAERSSEGKSKKQKK 246

[Close]

BLAST of Lsi04G020460 vs. NCBI nr
Match: XP_008463699.1 (PREDICTED: mediator-associated protein 2 [Cucumis melo] >KAA0066809.1 mediator-associated protein 2 [Cucumis melo var. makuwa] >TYK27956.1 mediator-associated protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 1.3e-74
Identity = 198/391 (50.64%), Postives = 214/391 (54.73%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MS+EVDA K+VEGYKPPAEFEED+REFLTDISL+D  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MSSEVDALKNVEGYKPPAEFEEDRREFLTDISLTDSEELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LHPDGH+GSFQ SSG  + V                                        
Sbjct: 61  LHPDGHMGSFQGSSGKSYDV---------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                  I C                                  
Sbjct: 121 -----------------------ISC---------------------------------- 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                           V+QEPEASVFLP
Sbjct: 181 ------------------------------------------------VAQEPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEK-TTPIKSLYQKASGISLTTSRQTTTSRGPHSS 300
           SSSDTRLVGKISRRISLVHYPEPEE EK TT +KSL QK+SGISLT SRQTTTSRGP SS
Sbjct: 241 SSSDTRLVGKISRRISLVHYPEPEELEKATTSLKSLCQKSSGISLTNSRQTTTSRGPQSS 246

Query: 301 SRRTSSTRSSKPRSSVSEYEEP----------EPSESRDHLKKDSSKRKRRQEPSRSIDH 360
           SRRT+S+RSSKPRSSVSE+EEP          + +ESRDH KKDSSKRKR  EPSRSIDH
Sbjct: 301 SRRTTSSRSSKPRSSVSEFEEPWKPSSVKQELKSTESRDHQKKDSSKRKRSHEPSRSIDH 246

Query: 361 STQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           ST+DSG  HSAVT SGSAE+SSEGKSKKQKK
Sbjct: 361 STRDSGHSHSAVTSSGSAERSSEGKSKKQKK 246

[Close]

BLAST of Lsi04G020460 vs. NCBI nr
Match: XP_022981239.1 (LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima])

HSP 1 Score: 255.8 bits (652), Expect = 6.0e-64
Identity = 183/392 (46.68%), Postives = 201/392 (51.28%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MSN+V A KSVEGYKPP EFEED REFLTDISLSD  ELWLIQWPANQA DFDGQEFSLQ
Sbjct: 1   MSNKVGAVKSVEGYKPPPEFEEDDREFLTDISLSDSVELWLIQWPANQAPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
             PDGHLGSFQ SSG  + V                                        
Sbjct: 61  HRPDGHLGSFQGSSGKSYDVV--------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                         S V+QEPEASVFLP
Sbjct: 181 ----------------------------------------------SCVAQEPEASVFLP 240

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKSLYQKASGISLTT-SRQTTTSRGPHSS 300
           SSSDTRLVGKI+RRISLVHYPEPEE EK TP+KS+Y+K+SG+SLTT SR TTTSRGPHSS
Sbjct: 241 SSSDTRLVGKIARRISLVHYPEPEELEKATPMKSVYKKSSGMSLTTSSRPTTTSRGPHSS 247

Query: 301 SRRTSSTRSSKPRSSVSE----------YEEPEPSESRDHLKKDSSKRKRRQEPS-RSID 360
           SRRTSSTRSSKPRSS+SE           +EPEPSESRD+LKKDSSKRKR  +PS R  +
Sbjct: 301 SRRTSSTRSSKPRSSISECGEPSKPSSIKQEPEPSESRDYLKKDSSKRKRXHKPSDRPTN 247

Query: 361 HSTQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
           HSTQD G    A T SG +  SSE K+KK+K+
Sbjct: 361 HSTQDEGCDPCAATFSGPSRLSSECKTKKKKQ 247

[Close]

BLAST of Lsi04G020460 vs. NCBI nr
Match: XP_022139366.1 (mediator-associated protein 2 [Momordica charantia] >XP_022139367.1 mediator-associated protein 2 [Momordica charantia])

HSP 1 Score: 251.1 bits (640), Expect = 1.5e-62
Identity = 178/387 (45.99%), Postives = 192/387 (49.61%), Query Frame = 0


Query: 1   MSNEVDAFKSVEGYKPPAEFEEDKREFLTDISLSDCAELWLIQWPANQASDFDGQEFSLQ 60
           MSNE  AFK  E YKP  EFEED RE L DISLSD  ELWLIQWPANQ  DFDGQEFSLQ
Sbjct: 1   MSNEFGAFKRAEEYKPAPEFEEDDRELLADISLSDSTELWLIQWPANQPPDFDGQEFSLQ 60

Query: 61  LHPDGHLGSFQSSSGNYHSVTQENGVEVCSNFSRKSQNYAKASQSLLQSFRPKMSPKCCF 120
           LH DGHLGSFQ SSG  + V                                        
Sbjct: 61  LHHDGHLGSFQGSSGKSYDVV--------------------------------------- 120

Query: 121 YHPYQLIEVEKCPTGLRGHFQAFIGCERVIGAKTMLRSQKLLLPFSSSPKIEKWVSRGQG 180
                                                                       
Sbjct: 121 ------------------------------------------------------------ 180

Query: 181 LPVYPWACSEKGGGVAYLVLNSSGDEFLLLDDIFPWPFCDANEAQFSRVSQEPEASVFLP 240
                                                         S V+QEPEASVFLP
Sbjct: 181 ----------------------------------------------SCVAQEPEASVFLP 239

Query: 241 SSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKSLYQKASGISLTTSRQTTTSRGPHSSS 300
           SSSDT+LVGKISRRISLVHYPEPEE E+ T +KS +QK+SGISLTTS + TTSR PHSSS
Sbjct: 241 SSSDTKLVGKISRRISLVHYPEPEELEQATAMKSAFQKSSGISLTTSSRQTTSRTPHSSS 239

Query: 301 RRTSSTRSSKPRSSVSEYE----------EPEPSESRDHLKKDSSKRKRRQEPSRSIDHS 360
           RRTS   SSKPRSSVSEYE          EPEPSES+DHLKKDSSKRK   EPSRS D S
Sbjct: 301 RRTS---SSKPRSSVSEYEEPSKPSSRKREPEPSESKDHLKKDSSKRKHAHEPSRSTDRS 239

Query: 361 TQDSGRGHSAVTISGSAEQSSEGKSKK 378
           TQ+ GR HSAVT SG++ QSSEGK+K+
Sbjct: 361 TQNLGRSHSAVTFSGASGQSSEGKTKR 239

[Close]

BLAST of Lsi04G020460 vs. TAIR 10
Match: AT5G64680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 114 Blast hits to 110 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 42; Fungi - 10; Plants - 37; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 5.2e-05
Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 218 FCDANEAQF---SRVSQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKS 277
           F D+N A++   S  SQ+  A + +P S ++ +VGKI+RR++LV YPEP E  +    ++
Sbjct: 61  FKDSNGAKYDLASFHSQDAGAELIIP-SEESMIVGKITRRVALVRYPEPNELLQKMKART 120

Query: 278 LYQKASGISLTTSRQTTTSRGPHSSSRRTSSTRSSKPRSSVSEYEEPEPSESRDHLKKDS 337
             QK  G    +S++++       SSR  S TRSS+ +S  S + E   S  R + +  S
Sbjct: 121 -QQKLVGSVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSS 180

Query: 338 SKRKRRQEPSRSIDHSTQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
            K +                    S  T+SGS+E+S++ K K +K+
Sbjct: 181 GKHR-------------------SSTSTVSGSSERSAKSKKKVKKE 202

[Close]

BLAST of Lsi04G020460 vs. TAIR 10
Match: AT5G64680.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 5.2e-05
Identity = 52/166 (31.33%), Postives = 85/166 (51.20%), Query Frame = 0


Query: 218 FCDANEAQF---SRVSQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKS 277
           F D+N A++   S  SQ+  A + +P S ++ +VGKI+RR++LV YPEP E  +    ++
Sbjct: 61  FKDSNGAKYDLASFHSQDAGAELIIP-SEESMIVGKITRRVALVRYPEPNELLQKMKART 120

Query: 278 LYQKASGISLTTSRQTTTSRGPHSSSRRTSSTRSSKPRSSVSEYEEPEPSESRDHLKKDS 337
             QK  G    +S++++       SSR  S TRSS+ +S  S + E   S  R + +  S
Sbjct: 121 -QQKLVGSVTNSSKKSSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSS 180

Query: 338 SKRKRRQEPSRSIDHSTQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
            K +                    S  T+SGS+E+S++ K K +K+
Sbjct: 181 GKHR-------------------SSTSTVSGSSERSAKSKKKVKKE 202

[Close]

BLAST of Lsi04G020460 vs. TAIR 10
Match: AT5G64680.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 53 Blast hits to 53 proteins in 20 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 3.4e-04
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 0


Query: 230 SQEPEASVFLPSSSDTRLVGKISRRISLVHYPEPEEFEKTTPIKSLYQKASGISLTTSRQ 289
           SQ+  A + +P S ++ +VGKI+RR++LV YPEP E  +    ++  QK  G    +S++
Sbjct: 84  SQDAGAELIIP-SEESMIVGKITRRVALVRYPEPNELLQKMKART-QQKLVGSVTNSSKK 143

Query: 290 TTTSRGPHSSSRRTSSTRSSKPRSSVSEYEEPEPSESRDHLKKDSSKRKRRQEPSRSIDH 349
           ++       SSR  S TRSS+ +S  S + E   S  R + +  S K +           
Sbjct: 144 SSNLT---QSSRHKSGTRSSREKSMFSGFTETPKSPKRKNSESSSGKHR----------- 203

Query: 350 STQDSGRGHSAVTISGSAEQSSEGKSKKQKK 381
                    S  T+SGS+E+S++ K K +K+
Sbjct: 204 --------SSTSTVSGSSERSAKSKKKVKKE 210

The following BLAST results are available for this feature:

BLAST of Lsi04G020460 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi04G020460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L047	8.8e-77	51.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G629490 PE=4 SV=1	[more]
A0A5A7VNG7	6.3e-75	50.64	Mediator-associated protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CLF4	6.3e-75	50.64	mediator-associated protein 2 OS=Cucumis melo OX=3656 GN=LOC103501782 PE=4 SV=1	[more]
A0A6J1J1C8	2.9e-64	46.68	LOW QUALITY PROTEIN: mediator-associated protein 2-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1CDR9	7.2e-63	45.99	mediator-associated protein 2 OS=Momordica charantia OX=3673 GN=LOC111010319 PE=...	[more]

BLAST of Lsi04G020460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896123.1	3.6e-77	51.28	mediator-associated protein 2 [Benincasa hispida]	[more]
XP_004146046.1	1.8e-76	51.15	mediator-associated protein 2 [Cucumis sativus] >XP_031740697.1 mediator-associa...	[more]
XP_008463699.1	1.3e-74	50.64	PREDICTED: mediator-associated protein 2 [Cucumis melo] >KAA0066809.1 mediator-a...	[more]
XP_022981239.1	6.0e-64	46.68	LOW QUALITY PROTEIN: mediator-associated protein 2-like [Cucurbita maxima]	[more]
XP_022139366.1	1.5e-62	45.99	mediator-associated protein 2 [Momordica charantia] >XP_022139367.1 mediator-ass...	[more]

BLAST of Lsi04G020460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G64680.1	5.2e-05	31.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.2	5.2e-05	31.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G64680.3	3.4e-04	31.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 353..371
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..312
None	No IPR available	PANTHER	PTHR36407:SF1	MEDIATOR-ASSOCIATED PROTEIN 2	coord: 1..380
IPR038823	Mediator-associated protein 2, plant	PANTHER	PTHR36407	MEDIATOR-ASSOCIATED PROTEIN 2	coord: 1..380

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G020460.1	Lsi04G020460.1	mRNA