Lsi04G008290 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGAAGTTTAGCTGAGTTGTAATAGAAAAGAAAAAGAAAAAGAAAAAACGAAGCAATTTCATTTGATAATCATGGCGACTTCGACACTGGGCAGCACCATAGGCTTCTCCCTGCCGTCGTCTTCCTCAGGTACCTCAGCTTATTGTACTTCCTCTTCAACCAGCAGGTTCAGCTTCTCGAGCACCATTCTTTCTCCTCTTAAGCTTAAAAAACAATCATCTGGAAGAAGAGCCAGAGCTGTAATTGCTGTGGAAATGGCTGCTGAGTATGTTCACTTCTTCCCTTCTTTCTTTGCTGTATGAGAAAATGGAGGGGTATGTACTACTTTGAAATTCTTTCTCTTCGTTCTCAAGAGGAAATAGCGAGTTTAAAGTTTAGGTTATTTCTTTTTTCTCATGCTATCGATCCGAATGGGGTTTCTTTCAAATTTACATTTCTTCCGAGTATAGATGCAGGGTCATTGAATGTTAGAAGGTAGAAGATTTGATGGAATCAAAGATTAGGATTCTGTTACAAAATTGATACAAGTACAATTTTGAGTTCGATTATTGTGTTGACGGATTATAGAAGAAGTTGCAGATAGCTTTTGCGAAATTACATTCGTTTGTAGTTTGATATTTCAATGTTCTTACTGATTTATTGTTTATGTCGATGTCTTGAAACTTAGGAATAAGAGAAGCAATTAAGGTTGAATTTATATTAGTGATTTGTTGTAAAGTTTCTGTCAGTATTTTCACCTTTTGTTTTGTGTGGGAAAGAGCTTTTCAGGAAGTGCTTCCTCCAGCCCTCACTTCATCTTCAGAACCACCTCCTATCTTTGATGGAACAACGAGGTTGGTTCAATTTTCATCCATCCACTGTAGTTCATGCTCCCACTAAACAAGACACTCAAGTTGTTAGACCATGGCATTTATTTTTTCTTTAGATATAATCTTTTAACACTTGCTTGAAGGTTAATCTAATATGTGATTCTTAACAATTAAACGTTAACATCAATTGGGGATGAAAAGACATTGTAGTGCTTCAAACTCTTGAGATCCTGTCCTGATATCATATAACATGTTTAAGCATCAACAAATCTAAGAACATAAGTTAATACATTTATATCCTTAACATTCATTTTATCATATGAAAATTCCTTGTTATATATACGAATGGCATGCCAATTTGATGCTTCGTTTGAATGCCTATGTGATGCTGACAATGCTGCTGTTTCGCTTCAACAATTGTAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAACTGTAAGGTTGTTTCTCTCACTCCCCAAATAACTTCCACTGATTAAGCATGTTTGGTTGTTTTTTCATGTCAGGTTTGTTTCTTTTGCCGCATTTTGAAGATCAACATTGCTCTCCTTGACATTAATTATAAGTTCATACTATTGTTTTGGAGCAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAAGATAGGCCTTCTTGGTACAAGGAAAAACTTTACCCACCTAACAAGGTAAAGATTTTCAGTACATTATACCTATGAATTATAATCATGGTAGTCAAATAACAACGATTACGTTTTTTATTTGCCCGTGAAGAAGAAAGAATTTTGATGCCTAGTTCTGTCACTTTGATGGTGGTACAGGTGAAGTTAGAAATTTTATCGAAGGGGCAAACTCTTACATTCAAACTTATATATTTGCATAGTTGGGGATATTAGATAGAGCTTCTAAATTATAATTCTTTTATATCTATTCTTGCATCTAAAATAAACTTAGGAAGCAACATCTCCCTCCCTTCTTCTTTGCTCCTCTTGCTCTAGTGAGGTTTTCAATATTAGGAAAAATTGAGAGAGAATTGAGTGACAAAAAACTTTAGCTGAAAATAAGAAACGAATAGAAAGTGGTCACTGAACTAACCTCTGCACTCGATGTGAAAAGATGGCCATTGTTAAATACAATTAAGCTGCTGTCTATTTCCTCTTTGATGTTTTTGACTTCTGAGCACTGGCGCAGGTGCCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGACCTTCATTATTTCCTGATGTAAGTATCCAGGAAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTTCTAATGCCTCACCTGCTTGAATTAAATGTCCATTAGCACTGAAGCATCCTAAATCTGAATATATAGGATTCAGAAAAGAGAGAGATTGCTGAAGAGTTGATAAACTACGTGAATTCTTTCACTGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGGTAAGATATTAGCAGCTTCTTCTTCCTCTTCCATGTTTTTTTACTGGAAAACACAGTTGAATCATTCAAATGATAAATCTTTTCTCAGATGTGGCGTTTGACCACATCGAATCCGCTCTTTCAAAATATGGAGATGGCCCATTTTTTCTAGGCCAGTTTAGTCTGGTAAGTAGCAACTTTCACTTTTTATGGTAGGTCAGACTTTACATCATTTATTGCTGAGGTTGATGTTGATGGAAATTTTATAGATTTGTCAATATTGATAAAATGTTAATATCGATGGATATTTCTATAAAAGCCATGGTAGCTTAAAAAAAACTCATAAAAATCATTTAAATGAATTATAAATATTTTAAGCTAAAAATCTATATTACTATTTATGTTAGATGTTAGTTTTTTTTTTAATTTTGTTGATATTTTTACCATATACCTTAAAATTATGTGAAAAAAATCAATTTATACCTCTAAATTTTGAGGGTTGTCTCAATTAAAATGTTTTAAATTTAGGTTGCCCCTTGCGAAGGGTAACAAGCTCACGCTACCATCGGCATCTCAATTAAAATGTTAAACTAATAATTGTATAAGTTTCAACCATAAATTTTTATAAGTGGTTCAATTTATATTCTCGTTAATTATTTGTAACTATTTTTCCTTACTTCCATTTAAAATCCAACAAGTATTCTTTTTCCAAAAGCCTACCATTGTTTCCTAAATAAGTCTGAGAAAATTAGAGGAAGACTGAAGGATGAAAAACTACTTATATTAATGAAAAACTTCTATCATCCATTTAGTTTCAGCATTTCTTTCTAATATTAAGTAAATGCAGTCTTATACACATGTGAAAATCATGCATTAATAGTTTTAAAACGGAACCTTTACAAAAAGTTTAAATTCACACATTTATAAAAATTTAGAAGTTTGTTTGATACAATTATTAGTTTAGAATTTTAGGTGAGACAAGTATCAAAGTTTAGAGGTATAAATTGATTTTCTCAAGTTAATGTAAAACCCTTCCATTAACGAAAACATCGATGAAATACCATAAATCATATATTGTATAATTTTTTTTCGCTCTCAGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTGGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGGTACTGAAAATATCTCTTTCTGATCTTTAAGAAATTGTTGCGTTCGCTCTTCATCTATTATAAGACTAGTGAGTGATGGAACCAAAAGGGGGATGCCCATGAATCATGATTTTGATATATTGTGCAGTAAATACCATTTTGGTCCCCTGCCAACAACATGAAGTAGTTGTAAGCAAGGTTTAAAATATCGATATCGATGAAAATATCGAGATCTTGATTTTACAGAAATTTCGATGGAAATATCGATAAAATATTGATTTCGATGAATATTTCTGGAAAAATTTTAAAAACAAAAAAATTTAAAAATAAATTTAAATAAGTAAATAAACATTTTATTATTTCCAAATAAGTAAACATGTCTATTGTATCTATTATATTTATATTAGTGGTATTTTGATATATTTTTTTTGTGTTTTGTAGATTTCTCTACGATATAATAGAAATATCGATTCACCCCTCATATCAATATCAAACTCATGGAAACATGGAAATATCGACATATCGATGAAAATTTAATACTATGGTTGTAAGATTAGTTGTAAGATTTATTGAAAGTACAAGGACTAAAATTTGACATGTGAAAAGGAACTAAAATAGAATGAGACCCAAAATGGTATTTTAACCTTGTGATATATTAATCTCTACTAGTTGTAGTAAAATGAATAATATCCGAACAACTTTTTCTTTGAATTAGACCAGACTAACAACTTTTTCTTTGAATTAGACCAGACTAAAAGAAGGCAAAGATCATGGCAATTGGACACTGGGGAGGGATGTAAGTGACTCGGGTCAGTTTTTGGTCAACACCGAGACCAAAATTAATTATTTTAAAATCTGAATAATTCACCTAACCAATACTAAATCCAAAATGAATCAATTTGGCAATTTTGTCACTTCTTTTTGTTGAAGGTGTTTGACTTTCCATTCTATTTGGCACACCAAGCTCTAAATTGATATCTACATATGGGGTGTCACAGAGGTTAATTGTGTGCCTTGAGTCTGTTGTCGTAAACAGGGTAAGTGGGTAACCTTCTATAATATTTGCTCATTTTCTATTGCTTAGGAGATGAACAAGATCGAGGGGTACCGACAAACAAGGGGCGATCCACAGGAACATGTTGATAGCTTTAAGAAGCGATTCTTGGTAATTCTCTCTGATATTCCAAGATTATTATTATTTTTGGATATCTATAAATGTTAGGACCAACTTGCACGCACCTTAACTATCGAATATCTATAAAGGTTAAGGCCATCTTGTATGCACATTTGTTATATGTAAAGGTAGTCGTAGATATTTAATGTAAGAGGTTACCAAGGCATTTTTTTCCTTAACCACTCAAGTAATTCTCTGACGTAAAATTTTGAATGGTAATTGTTAGAGTATTGATAGAATGATAAATTTATGTTCACCCACCTACTTAAACTTTTGAGTCAATCGGTAATTTAACATTAACCTATGTTTTTGGTTAAATTTGATTGTGGAAGTCAAGATCGGAGAAACATCACACTATTTAGATCCCCATCAGTGTATGGATGAAATTTTTCTAAAGCTAATCTGTCACAACAATTATTGAAAAATTGAATCATGAGAATGAAAAGAAAACAAGTTTAGATAAATCTCAATGACTTGGTTGACATTATTATATCATTTATTCTTTTATCCTGTGCAGAGCCGTTTGTGAAAGCCACATCAGCATAGGGTCCCCATGGCAATGGTTAACTGAACACGTGCTGTCACGTGTGGATGTTGCTTCTTGTAATGAGATAACTTCATGTGTAACATTTAACAAATAAAGGAGCGTTTGAGATCATTGTACCTTTTGTTTTTTTTTTTTTTTTCAGATGGATTATTGA CGAAGTTTAGCTGAGTTGTAATAGAAAAGAAAAAGAAAAAGAAAAAACGAAGCAATTTCATTTGATAATCATGGCGACTTCGACACTGGGCAGCACCATAGGCTTCTCCCTGCCGTCGTCTTCCTCAGGTACCTCAGCTTATTGTACTTCCTCTTCAACCAGCAGGTTCAGCTTCTCGAGCACCATTCTTTCTCCTCTTAAGCTTAAAAAACAATCATCTGGAAGAAGAGCCAGAGCTGTAATTGCTGTGGAAATGGCTGCTGAGTATGTTCACTTCTTCCCTTCTTTCTTTGCTGTATGAGAAAATGGAGGGTATTTTCACCTTTTGTTTTGTGTGGGAAAGAGCTTTTCAGGAAGTGCTTCCTCCAGCCCTCACTTCATCTTCAGAACCACCTCCTATCTTTGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAAGATAGGCCTTCTTGGTACAAGGAAAAACTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGACCTTCATTATTTCCTGATGATTCAGAAAAGAGAGAGATTGCTGAAGAGTTGATAAACTACGTGAATTCTTTCACTGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCGTTTGACCACATCGAATCCGCTCTTTCAAAATATGGAGATGGCCCATTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTGGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGACCAGACTAAAAGAAGGCAAAGATCATGGCAATTGGACACTGGGGAGGGATGAGATGAACAAGATCGAGGGGTACCGACAAACAAGGGGCGATCCACAGGAACATGTTGATAGCTTTAAGAAGCGATTCTTGATGGATTATTGA ATGTTCACTTCTTCCCTTCTTTCTTTGCTGTATGAGAAAATGGAGGGTATTTTCACCTTTTGTTTTGTGTGGGAAAGAGCTTTTCAGGAAGTGCTTCCTCCAGCCCTCACTTCATCTTCAGAACCACCTCCTATCTTTGATGGAACAACGAGGCTTTACATATCTTATACATGCCCTTATGCGCAGCGTGTGTGGATTACTCGGAACTGTAAGGGTTTGCAGAATAAGATACAATTGGTTCCAATAAATCTACAAGATAGGCCTTCTTGGTACAAGGAAAAACTTTACCCACCTAACAAGGTGCCAGCTCTTGAACATAATAATGAAGTCAAAGGAGAGAGTCTTGACTTAATTAAATATATTGACAGCAATTTTGAAGGACCTTCATTATTTCCTGATGATTCAGAAAAGAGAGAGATTGCTGAAGAGTTGATAAACTACGTGAATTCTTTCACTGGATCTGTGGTTTCTTCATTTAAAGGAGATGGAAATGAAGCTGATGTGGCGTTTGACCACATCGAATCCGCTCTTTCAAAATATGGAGATGGCCCATTTTTTCTAGGCCAGTTTAGTCTGGTGGATATAGCTTATGCTCCGTTTATTGAAAGGTTTCAGCCGTTCTTATTGGAAGTAAAAACATATGACATCACTGCTGGCAGGCCAAAACTAGCAGCTTGGATTGAGACCAGACTAAAAGAAGGCAAAGATCATGGCAATTGGACACTGGGGAGGGATGAGATGAACAAGATCGAGGGGTACCGACAAACAAGGGGCGATCCACAGGAACATGTTGATAGCTTTAAGAAGCGATTCTTGATGGATTATTGA MFTSSLLSLLYEKMEGIFTFCFVWERAFQEVLPPALTSSSEPPPIFDGTTRLYISYTCPYAQRVWITRNCKGLQNKIQLVPINLQDRPSWYKEKLYPPNKVPALEHNNEVKGESLDLIKYIDSNFEGPSLFPDDSEKREIAEELINYVNSFTGSVVSSFKGDGNEADVAFDHIESALSKYGDGPFFLGQFSLVDIAYAPFIERFQPFLLEVKTYDITAGRPKLAAWIETRLKEGKDHGNWTLGRDEMNKIEGYRQTRGDPQEHVDSFKKRFLMDY Homology
BLAST of Lsi04G008290 vs. ExPASy Swiss-Prot
Match: Q9M2W2 (Glutathione S-transferase L2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GSTL2 PE=2 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.7e-82 Identity = 152/238 (63.87%), Postives = 183/238 (76.89%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy Swiss-Prot
Match: A1XBB7 (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica OX=39946 GN=GSTZ5 PE=1 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 6.3e-82 Identity = 153/245 (62.45%), Postives = 185/245 (75.51%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy Swiss-Prot
Match: Q8H8U5 (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica OX=39947 GN=GSTZ5 PE=2 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 6.3e-82 Identity = 153/245 (62.45%), Postives = 185/245 (75.51%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy Swiss-Prot
Match: Q9LZ06 (Glutathione S-transferase L3 OS=Arabidopsis thaliana OX=3702 GN=GSTL3 PE=2 SV=1) HSP 1 Score: 288.1 bits (736), Expect = 1.0e-76 Identity = 142/246 (57.72%), Postives = 178/246 (72.36%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy Swiss-Prot
Match: Q6NLB0 (Glutathione S-transferase L1 OS=Arabidopsis thaliana OX=3702 GN=GSTL1 PE=2 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.8e-76 Identity = 147/249 (59.04%), Postives = 182/249 (73.09%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy TrEMBL
Match: A0A1S3BDL2 (protein IN2-1 homolog B OS=Cucumis melo OX=3656 GN=LOC103488732 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.6e-120 Identity = 217/247 (87.85%), Postives = 225/247 (91.09%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy TrEMBL
Match: A0A0A0KLG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177050 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 1.3e-119 Identity = 215/247 (87.04%), Postives = 222/247 (89.88%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy TrEMBL
Match: A0A6J1JYS4 (protein IN2-1 homolog B OS=Cucurbita maxima OX=3661 GN=LOC111489100 PE=4 SV=1) HSP 1 Score: 433.7 bits (1114), Expect = 5.7e-118 Identity = 210/246 (85.37%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy TrEMBL
Match: A0A6J1GZ79 (protein IN2-1 homolog B isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458219 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 2.4e-116 Identity = 206/245 (84.08%), Postives = 222/245 (90.61%), Query Frame = 0
BLAST of Lsi04G008290 vs. ExPASy TrEMBL
Match: A0A6J1GXY4 (protein IN2-1 homolog B isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458219 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.9e-114 Identity = 205/245 (83.67%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of Lsi04G008290 vs. NCBI nr
Match: XP_008445827.1 (PREDICTED: protein IN2-1 homolog B [Cucumis melo]) HSP 1 Score: 442.2 bits (1136), Expect = 3.3e-120 Identity = 217/247 (87.85%), Postives = 225/247 (91.09%), Query Frame = 0
BLAST of Lsi04G008290 vs. NCBI nr
Match: XP_004143598.1 (protein IN2-1 homolog B isoform X1 [Cucumis sativus] >KGN50485.1 hypothetical protein Csa_000618 [Cucumis sativus]) HSP 1 Score: 439.1 bits (1128), Expect = 2.8e-119 Identity = 215/247 (87.04%), Postives = 222/247 (89.88%), Query Frame = 0
BLAST of Lsi04G008290 vs. NCBI nr
Match: XP_023526395.1 (protein IN2-1 homolog B isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 434.1 bits (1115), Expect = 9.0e-118 Identity = 210/246 (85.37%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Lsi04G008290 vs. NCBI nr
Match: XP_022992909.1 (protein IN2-1 homolog B [Cucurbita maxima]) HSP 1 Score: 433.7 bits (1114), Expect = 1.2e-117 Identity = 210/246 (85.37%), Postives = 224/246 (91.06%), Query Frame = 0
BLAST of Lsi04G008290 vs. NCBI nr
Match: KAG6601035.1 (putative protein phosphatase 2C 38, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 428.3 bits (1100), Expect = 4.9e-116 Identity = 206/246 (83.74%), Postives = 223/246 (90.65%), Query Frame = 0
BLAST of Lsi04G008290 vs. TAIR 10
Match: AT3G55040.1 (glutathione transferase lambda 2 ) HSP 1 Score: 306.2 bits (783), Expect = 2.6e-83 Identity = 152/238 (63.87%), Postives = 183/238 (76.89%), Query Frame = 0
BLAST of Lsi04G008290 vs. TAIR 10
Match: AT5G02790.1 (Glutathione S-transferase family protein ) HSP 1 Score: 288.1 bits (736), Expect = 7.4e-78 Identity = 142/246 (57.72%), Postives = 178/246 (72.36%), Query Frame = 0
BLAST of Lsi04G008290 vs. TAIR 10
Match: AT5G02780.1 (glutathione transferase lambda 1 ) HSP 1 Score: 287.3 bits (734), Expect = 1.3e-77 Identity = 147/249 (59.04%), Postives = 182/249 (73.09%), Query Frame = 0
BLAST of Lsi04G008290 vs. TAIR 10
Match: AT5G02780.2 (glutathione transferase lambda 1 ) HSP 1 Score: 287.0 bits (733), Expect = 1.6e-77 Identity = 146/248 (58.87%), Postives = 183/248 (73.79%), Query Frame = 0
BLAST of Lsi04G008290 vs. TAIR 10
Match: AT1G78370.1 (glutathione S-transferase TAU 20 ) HSP 1 Score: 52.8 bits (125), Expect = 5.2e-07 Identity = 40/134 (29.85%), Postives = 64/134 (47.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|