Lsi04G004540 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGGGTCTTGAAGTTATTTTAAAATAGTCTCTCACCAATTGGACCTATGACTCACTAATTATTTTCATTTTTTTTGTATGAACACTTCCAAAATTTATATGAATTATTCGATAGATTAGCCTAAAAAAATTGGGTCAAAATGTCACATTGTTTTTTCTCTGTGATTCCTTTTTTGTATTCCGTCTCAATAATGATTATGCTCCCTTCCTCTGACAATGCATTGCAATCGGTGGCCATAAACATAGCTTTTTCAAATGCCAAATGAACTAACTGTAGAATGCAAGAGCAAGAAAGTGAGAAAGAGCGAGAAAGTGAGCTAGAACCATAGCAAGAGCTCGAAAAGAAAAAAATAATCATAAAAAAATCTTGATGATGCCAACAAAAGGTCAGAAAGTTCTATTTTGAAAAAGCCGATCAAGTTTCATTTTTTCAAAAAAATTTAAGTCCTCCATACAAAAAAACCCAAGTTATATTTCTTTTAACTTTTCACATATGTATCATATGTGATCAATTTAAGTACTTGAATCAATTTTTGGAACTGATGTTACGTGATGTATCCGACTCTCAACTTCATGCTTTCCTATAAACTAATACTTGTATCCATCATCCATCCCATTGCTTGCAGGAGCAGCTTAAACTTCTAGGCAAGACTCAGGGCTGCTGACGCATCTGGAAACTGAAGGTATATGCATTATGCAGCATCCTCCAATTGGTTTATTCTTGAGCACAAATTAACCTTTCAAAATTTTCTATGATCGACAATTGTTTCTCAAATGCACTGAAAAAGCATCAAACGGATGCCAGAATAAGTATCCTTGTGTTGGTTTAATATTTATTACTTGCTTGTTAGTGTCCCAATTATTCTTTCAGGCTCTTAAAGAACTTACTGACACACTGTCAAGAGATTTTTATAGAAGACCAACCAAGAGCCCTGCACAGGTTTGAAGACTTTTGGATTCATCTTGATCCTTCCTCTGTTTTCAGATTATTAGTGTATGCATGTGGAAGAAGTGATTGATGTTGACTGATGTGCAAGTATTCATAATATACTCTGAGAAATTGGATTACTCCTTCTCACAAATAAACTTTAGTATTGAGAAATTCAGTTTACCTCTAGATTCTACAAAATTAGTGATATGTAAGGGTTTTTAGGTGCAAACAAAGTTGGTTAGGAAAGAGAGAAACCCATGGTATATAAGTAAAAACAATTTTTCCCATTAGTACGAGACTTTTTGGGTGGTTCTAAAAGTAAAGTCATGAAGGTTTATGTCCAAGATAAACAATAACATACCATTGTGGAGATAGGTAGAAGTTTCATTGTCCTTGTTAATTAGTATCAGAGCTATAGTCTAAACCTAGTTGTCTGGGTGAGATCCTAAGTGATTTCGAACAAAAGTTAGGGAGTCTTGTAGATGAATCTCCAGATCGAACCAAGAATGATTGAGATGCAGTAAGCAAGTAGAGCTCTATCAAATCAAGTGGATAAAATTCACTAGTACTGTCGCTTCTTCTAGTTCATTGTTTCTTCATAATCACTATTTATTACATTATCCTTTCTTTTCTTGCTTTTTTGTTCTTATTTTAAGATTTTTGAAATAGAAAAGTTGTAACATTATATTTTAGAATGCTCGTCAATTTACATTTATCTAATTTAACATTAGGTAAATTCTTCCAATACATTTCATTTCCCACGTGTATAACTTTCTTCACCGTTTAAAAGTCCAATAATCATAAATGTTTATTATTGTTATGGTGACTAGAAGGAAGTAAACATGGAATAGAAAAGAGATTATCATAAAACAAGTTCAGTTATATGAGAGCTCTTGAAAGCCACAGAGTATAAAGAATGTGTTATGTTTGTTTGGCTTCACCCAACCAGTCGACACAACCAAAAAAAGAAAAACTAAACTTGTGAGTTGAGCAGTTGACCCCAAGAATTAGTATTATGAATCTGTTTGTCGACCGCGATGTGTGCTAGAATTTGGAGTTGAAATTTAGCAAGGGCGACCAACGAAGCAGGCGAGCGCACCTGCAAAACGTGTCATTCTTGTAACGTATGTCCCTTGTTTATAGGAGATCATATCCATCCTTGAGAAGGGTCTTCTCTTGCTTTGATCGCCTGAGGTAACAAAGAATGCTCCATTCATCATCAAGTCTCCCTCTGATCTCCATGTCCAGCTTTTCCACACCTCCTCTGGTGAGTACTCTCTCTTTGTCACCTGATTTAAGTTCACACCCATTTTTAGTTTCTAGACAAAATTAAAAGCAAATGAATTGCTTGAGCTGTTTGTTAAATATTTGATTACCTCTTTGGCATATACATTGGGAGGAGCAATGAAGCGATTTCCCTGGCTGATAATGGTGGGATGCTGGCTACCACCAATGGCATACATAAGCCAATGAGTGTAGTCATTGTTCACAACATGGAAGAAGCCCCATCGACACCTTGGCATCCTCTGTACCAATCCTTGACCAAAGTGGTTGAATGCTACAGTCACTTGCATTATCTGATCATTCGAGTACCCGTCACTCGCTCCAAACAACATCACCTGTATATAACTTAGCTTTTAACTTCAATTATATAAAACCATCAGTCACATTGTTTCAGGATAAGATACATTATTACCTCATTATGGTGAGTGAAGTGGCAATTGGATATAGTGATGGCAGTGGATCCCATAATGGCATCAATGAGACCATCATGACAATTGGACATGGAAACATGGTCAATCCAAACATTGGAGGAACCAAAGATGGAAATGCCGTCACCATCGCTCATAGTCCTCAAACCCACATGGTCGACAGCATCTCGAATCATTCCACCGCTACCGACGACAATGTGATGGATACGAAGGCCGTGGATGATGACATTTTTGATGTACTGAAGAGTAATGCCAGCCCCATAAGCAATCTGAACATTGGCCCCTCTTGCATCAATGGTCTTGTCGCTGGTCACGATGAGCTCCTGAGTGAGCCTAATGGCCATGTTGGTAGAGAAGATGATCCACAGAGGTCCCTTTTGGATCACAGCATGACGAAGAGTCCCAGGTTTCGGGTTCATGAGGTCCGAATCCGACGAGTCATTCACGACGTAGTATGGACCCAACTTTCCACCAATGGTCTTGCGGCCAAAACCCAAAACACAATCGGCTAGCTTCTTCCGGTTATTGGCCCAATTGGGGTCGCATCTCCAGCACCGATCAATGGGATTAGTGGCTCGACATGGGCCTGTATATTTCTTCAAATTCCTCCTCGTACTGTTGCTTCCACTCAATACCCTGCATCAAACTCAACCCCCATTAATTCATTCCCCTAATTCCGAGTTTAGTTCAATGATTAAAGTTGTAAGAAACTACAAATTTCAAACTTACTGGCCAACTTCGGCATTGAAGGAGTTGGTGACGTTCTCAGGATTAGGCTCGAAGGCATCGGTGGCGGCTTTTTCAGCCTCGGCAGCGCGTGCTTTCCAGTAG ATGGAAGGGGCTCTTAAAGAACTTACTGACACACTGTCAAGAGATTTTTATAGAAGACCAACCAAGAGCCCTGCACAGCAAGGGCGACCAACGAAGCAGGCGAGCGCACCTGCAAAACGTGTCATTCTTGTAACGAGATCATATCCATCCTTGAGAAGGGTCTTCTCTTGCTTTGATCGCCTGAGGAGCAATGAAGCGATTTCCCTGGCTGATAATGGTGGGATGCTGGCTACCACCAATGGCATACATAAGCCAATGAGTGTAGTCATTGTTCACAACATGGAAGAAGCCCCATCGACACCTTGGCATCCTCTGTACCAATCCTTGACCAAAGTGGTTGAATGCTACAGTCACTTGCATTATCTGATCATTCGAGTACCCGATAAGATACATTATTACCTCATTATGGTGAGTGAAGTGGCAATTGGATATAGTGATGGCAGTGGATCCCATAATGGCATCAATGAGACCATCATGACAATTGGACATGGAAACATGGTCAATCCAAACATTGGAGGAACCAAAGATGGAAATGCCGTCACCATCGCTCATAGTCCTCAAACCCACATGGTCGACAGCATCTCGAATCATTCCACCGCTACCGACGACAATGTGATGGATACGAAGGCCGTGGATGATGACATTTTTGATGTACTGAAGAGTAATGCCAGCCCCATAAGCAATCTGAACATTGGCCCCTCTTGCATCAATGGTCTTGTCGCTGGTCACGATGAGCTCCTGAGTGAGCCTAATGGCCATGTTGGTAGAGAAGATGATCCACAGAGGTCCCTTTTGGATCACAGCATGACGAAGAGTCCCAGGTTTCGGGTTCATGAGGTCCGAATCCGACGAGTCATTCACGACTATGGACCCAACTTTCCACCAATGGTCTTGCGGCCAAAACCCAAAACACAATCGGCTAGCTTCTTCCGGTTATTGGCCCAATTGGGGTCGCATCTCCAGCACCGATCAATGGGATTAGTGGCTCGACATGGGCCTGTATATTTCTTCAAATTCCTCCTCGTACTGTTGCTTCCACTCAATACCCTGCATCAAACTCAACCCCCATTAATTCATTCCCCTAATTCCGAGTTTAGTTCAATGATTAAAGTTGTAAGAAACTACAAATTTCAAACTTACTGGCCAACTTCGGCATTGAAGGAGTTGGTGACGTTCTCAGGATTAGGCTCGAAGGCATCGGTGGCGGCTTTTTCAGCCTCGGCAGCGCGTGCTTTCCAGTAG ATGGAAGGGGCTCTTAAAGAACTTACTGACACACTGTCAAGAGATTTTTATAGAAGACCAACCAAGAGCCCTGCACAGCAAGGGCGACCAACGAAGCAGGCGAGCGCACCTGCAAAACGTGTCATTCTTGTAACGAGATCATATCCATCCTTGAGAAGGGTCTTCTCTTGCTTTGATCGCCTGAGGAGCAATGAAGCGATTTCCCTGGCTGATAATGGTGGGATGCTGGCTACCACCAATGGCATACATAAGCCAATGAGTGTAGTCATTGTTCACAACATGGAAGAAGCCCCATCGACACCTTGGCATCCTCTGTACCAATCCTTGACCAAAGTGGTTGAATGCTACAGTCACTTGCATTATCTGATCATTCGAGTACCCGATAAGATACATTATTACCTCATTATGGTGAGTGAAGTGGCAATTGGATATAGTGATGGCAGTGGATCCCATAATGGCATCAATGAGACCATCATGACAATTGGACATGGAAACATGGTCAATCCAAACATTGGAGGAACCAAAGATGGAAATGCCGTCACCATCGCTCATAGTCCTCAAACCCACATGGTCGACAGCATCTCGAATCATTCCACCGCTACCGACGACAATGTGATGGATACGAAGGCCGTGGATGATGACATTTTTGATGTACTGAAGAGTAATGCCAGCCCCATAAGCAATCTGAACATTGGCCCCTCTTGCATCAATGGTCTTGTCGCTGGTCACGATGAGCTCCTGAGTGAGCCTAATGGCCATGTTGGTAGAGAAGATGATCCACAGAGGTCCCTTTTGGATCACAGCATGACGAAGAGTCCCAGGTTTCGGGTTCATGAGGTCCGAATCCGACGAGTCATTCACGACTATGGACCCAACTTTCCACCAATGGTCTTGCGGCCAAAACCCAAAACACAATCGGCTAGCTTCTTCCGGTTATTGGCCCAATTGGGGTCGCATCTCCAGCACCGATCAATGGGATTAGTGGCTCGACATGGGCCTGTATATTTCTTCAAATTCCTCCTCGTACTGTTGCTTCCACTCAATACCCTGCATCAAACTCAACCCCCATTAATTCATTCCCCTAATTCCGAGTTTAGTTCAATGATTAAAGTTGTAAGAAACTACAAATTTCAAACTTACTGGCCAACTTCGGCATTGAAGGAGTTGGTGACGTTCTCAGGATTAGGCTCGAAGGCATCGGTGGCGGCTTTTTCAGCCTCGGCAGCGCGTGCTTTCCAGTAG MEGALKELTDTLSRDFYRRPTKSPAQQGRPTKQASAPAKRVILVTRSYPSLRRVFSCFDRLRSNEAISLADNGGMLATTNGIHKPMSVVIVHNMEEAPSTPWHPLYQSLTKVVECYSHLHYLIIRVPDKIHYYLIMVSEVAIGYSDGSGSHNGINETIMTIGHGNMVNPNIGGTKDGNAVTIAHSPQTHMVDSISNHSTATDDNVMDTKAVDDDIFDVLKSNASPISNLNIGPSCINGLVAGHDELLSEPNGHVGREDDPQRSLLDHSMTKSPRFRVHEVRIRRVIHDYGPNFPPMVLRPKPKTQSASFFRLLAQLGSHLQHRSMGLVARHGPVYFFKFLLVLLLPLNTLHQTQPPLIHSPNSEFSSMIKVVRNYKFQTYWPTSALKELVTFSGLGSKASVAAFSASAARAFQ Homology
BLAST of Lsi04G004540 vs. ExPASy TrEMBL
Match: A0A287GWW5 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.3e-40 Identity = 87/222 (39.19%), Postives = 141/222 (63.51%), Query Frame = 0
BLAST of Lsi04G004540 vs. ExPASy TrEMBL
Match: C4IZH1 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 5.8e-34 Identity = 89/246 (36.18%), Postives = 144/246 (58.54%), Query Frame = 0
BLAST of Lsi04G004540 vs. ExPASy TrEMBL
Match: A0A287TZ69 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-28 Identity = 77/225 (34.22%), Postives = 134/225 (59.56%), Query Frame = 0
BLAST of Lsi04G004540 vs. ExPASy TrEMBL
Match: A0A287U006 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-28 Identity = 77/225 (34.22%), Postives = 134/225 (59.56%), Query Frame = 0
BLAST of Lsi04G004540 vs. ExPASy TrEMBL
Match: A0A287TZ68 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.6e-28 Identity = 77/225 (34.22%), Postives = 134/225 (59.56%), Query Frame = 0
BLAST of Lsi04G004540 vs. NCBI nr
Match: ACR34321.1 (unknown [Zea mays]) HSP 1 Score: 155.2 bits (391), Expect = 1.2e-33 Identity = 89/246 (36.18%), Postives = 144/246 (58.54%), Query Frame = 0
BLAST of Lsi04G004540 vs. NCBI nr
Match: KAG2384001.1 (uncharacterized protein HKW66_Vig0152360 [Vigna angularis]) HSP 1 Score: 137.5 bits (345), Expect = 2.6e-28 Identity = 78/222 (35.14%), Postives = 130/222 (58.56%), Query Frame = 0
BLAST of Lsi04G004540 vs. NCBI nr
Match: ACN33719.1 (unknown [Zea mays]) HSP 1 Score: 136.3 bits (342), Expect = 5.8e-28 Identity = 70/194 (36.08%), Postives = 116/194 (59.79%), Query Frame = 0
BLAST of Lsi04G004540 vs. NCBI nr
Match: ACL53931.1 (unknown [Zea mays]) HSP 1 Score: 135.6 bits (340), Expect = 9.9e-28 Identity = 74/226 (32.74%), Postives = 136/226 (60.18%), Query Frame = 0
BLAST of Lsi04G004540 vs. NCBI nr
Match: KAF7820188.1 (hypothetical protein G2W53_025643 [Senna tora]) HSP 1 Score: 122.9 bits (307), Expect = 6.6e-24 Identity = 71/214 (33.18%), Postives = 123/214 (57.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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