Lsi04G003580 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G003580
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribosome maturation factor RimP
Location	chr04: 3585339 .. 3587536 (-)
RNA-Seq Expression	Lsi04G003580
Synteny	Lsi04G003580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTGGTAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCGCCGTTTCATCTTCACTCTCCTCCGTCAGAGCACCGTCTTCCATAGTCTTTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCGACCACGCATTCGCCTTTTCCCCCGCAGCAGCCCTGCGGTTACTCAATACCAATTCCTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACTCCAGTGTACGGATGCGTTTTCTTATTCCTCTGCAATCCGTCAACTTTCTCTTATTTTGAGGCTTCAATCGAGATTACCGTTTGGAATATGATTAATTAATGGCTCTGAGTAGTTTTATGCTGCAGATGATGTTTTCTGTTTAGTGGAATATCTCTAAGGGTGTGGTGTGATTCAGTCATGTTCAGTTGTTTTGATTGTTGAACTGCTTATCTAGTTTATTATGTTTCGTCGAGTTTTTTGTTCCTTTATTTATCCATGCAGTTCTAATGCTTGGAAAGCTTTATAATTACAATACTATTTGACTAGTTTTAGTGTTATTTATAAATTTTTTAAACGTAAAATAGAGATGGTGTACTATAGATTTGATGTGGAAGGTCTCCTTCGCTTCAGTGTACAGAGTTTTCCCCATTCTAATGATAATATCAGTGTGTTCATTGCTAGCTGTACATTTGTCAGGGTATTTTTTACTCTTTTACTGCCAAAATTGGCTATTGGAATTTCTAATTGAAGATTTGTTTGAGCTATGACTAAACCTCGAGGCCTCAATCTTGGAAATCTCTGAACTTTTGTAGATGGGAGGGATGAAGGGGAAGAAACCACAGATGGATGGGAAGAAGACGATGATCTGGAGCCTGAGGTATTTCTATCTATTGAGCTGAGCTTTTATTCACTATATTATTATAGGTGATGCTAATTGTTGATAACATAGCTTGGTGATGGAGGGGGAGGTGGTGGTATTGTTTTGCAAGGCGTGCCATGGGGTGAACATGTTCTTCTTCTTGCTCAAGAGGTCCTGCTGCAATTTGGCGATGACATAAAACTCTATTCTTTCAAGGTCACTCCACGTGGGTACATTTATGTCAGATTAGACAAACTCTCAAACGAGTAATTTTCTTCTTTCTATTTGTTCATGTTTTTCTCCCATAATAGCTTTGCATTCTACCTTCTGAGTACTGGGGAATTTGATTTGCAATCACATTTTAAGCCCCTTTTGCTTGTGGGAGAGATTAGCAATGAACTCAAACCCTGTCTTATAATAACAGGAAGGAAAAAGGTAAAATTATATGAAACTCATCTGTCTCTGGGCTTTTAAATTTTATTTCATAACCTCTCTTTGTCACTATGAATTTGGCCGACTCTGATGGTTGTTGCCCCCAACTAGTTAATATTGAAAATTTCTATTCTTTGCTGAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAATGAATATATATATATATATATTTGTTTTTGGATAGGAAATCTGTAGTCATGTATTTGTGATGATAGCATAACCATGAAAATAAACTGGGGTAGGCACTCCATCGGTTTGGATTTCATAATTAAGAATTACAGGCGGCTTTAACTTGGATTTATAAATTTACAATTTGTAAAATATTGTTCTCTTCTTAGACTTGGTTGTCCCGGCCTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAAAAACGATTAGATGAAACTGGAGCACTTGGAAAGATTCCCGATGATTTAGCTCTTGAGGTAATAGCTGATAGACTTACCATCCATCCCTACTGTACAAAAATGATTACATAGTGGTTAGTGCACATTATTATGGCTGCATACATTAATACCTGAACAATCATGCTTCTGTTGTGAAGGTATCATCTCCAGGTGCAGAGAGATTACTGAAGGTCCCAGATGATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAAGATTTAGACTCGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTAAATCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCGTACGAAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA

mRNA sequence

ATGCGTGGTAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCGCCGTTTCATCTTCACTCTCCTCCGTCAGAGCACCGTCTTCCATAGTCTTTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCGACCACGCATTCGCCTTTTCCCCCGCAGCAGCCCTGCGGTTACTCAATACCAATTCCTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACTCCAGTATGGGAGGGATGAAGGGGAAGAAACCACAGATGGATGGGAAGAAGACGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGGAGGTGGTGGTATTGTTTTGCAAGGCGTGCCATGGGGTGAACATGTTCTTCTTCTTGCTCAAGAGGTCCTGCTGCAATTTGGCGATGACATAAAACTCTATTCTTTCAAGGTCACTCCACGTGGACTTGGTTGTCCCGGCCTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAAAAACGATTAGATGAAACTGGAGCACTTGGAAAGATTCCCGATGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTGAAGGTCCCAGATGATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAAGATTTAGACTCGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTAAATCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCGTACGAAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA

Coding sequence (CDS)

ATGCGTGGTAACAGGATTGCTCATACTTTGCTCCATCGAGCTCGAATCGCCGCCGTTTCATCTTCACTCTCCTCCGTCAGAGCACCGTCTTCCATAGTCTTTGGCTCCGAAGCAACGTCTTCTCAAAGTGCTTGCTCCTCTTCCTCCCGTCGCGACCACGCATTCGCCTTTTCCCCCGCAGCAGCCCTGCGGTTACTCAATACCAATTCCTCTAAAGACTTTCAAGATGAAGTGAAAGAACATAATCCACTCCAGTATGGGAGGGATGAAGGGGAAGAAACCACAGATGGATGGGAAGAAGACGATGATCTGGAGCCTGAGCTTGGTGATGGAGGGGGAGGTGGTGGTATTGTTTTGCAAGGCGTGCCATGGGGTGAACATGTTCTTCTTCTTGCTCAAGAGGTCCTGCTGCAATTTGGCGATGACATAAAACTCTATTCTTTCAAGGTCACTCCACGTGGACTTGGTTGTCCCGGCCTGGAGGAGCTTGAAAGTTATAGCCAAGAGTACAAAAAACGATTAGATGAAACTGGAGCACTTGGAAAGATTCCCGATGATTTAGCTCTTGAGGTATCATCTCCAGGTGCAGAGAGATTACTGAAGGTCCCAGATGATCTGTTTAGATTTAAAGCCATGCCAATGCGAGTTTCCTACATTGAAGATTTAGACTCGAGAGGCACTGAAAATGATGGAGTTTTTATGCTGGATCATGTAGAATTGGAATCTGAGAGCTGTATCTGGAAATTGGCAAATGTGAGGGAAAACCGAGATCCTTTAAGTAAGGGTAGGCCTTTAAATCGTAAGCAGAAAGAATGGAGGTTAAAGTTACCGTACGAAAATCATAAGAAGGTATTCCTTTACCTTGAATGCTGA

Protein sequence

MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC

Homology

[Close]

BLAST of Lsi04G003580 vs. ExPASy Swiss-Prot
Match: Q72NX1 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) OX=267671 GN=rimP PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.0e-05
Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 143 IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-D 202
           +KLYS KV  R                 G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVF 234
             L+VSS GAER L +P DL RF+ +P+R+ +  +   +  E +G+F
Sbjct: 80  YTLKVSSAGAERKLNLPGDLDRFRGIPIRLVFRSEESEK--EQEGIF 119

[Close]

BLAST of Lsi04G003580 vs. ExPASy Swiss-Prot
Match: Q8F7K3 (Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) OX=189518 GN=rimP PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.0e-05
Identity = 36/107 (33.64%), Postives = 52/107 (48.60%), Query Frame = 0


Query: 143 IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-D 202
           +KLYS KV  R                 G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVF 234
             L+VSS GAER L +P DL RF+ +P+R+ +  +   +  E +G+F
Sbjct: 80  YTLKVSSAGAERKLNLPGDLDRFRGIPIRLVFRSEESEK--EQEGIF 119

[Close]

BLAST of Lsi04G003580 vs. ExPASy Swiss-Prot
Match: Q04U33 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) OX=355277 GN=rimP PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 35/109 (32.11%), Postives = 52/109 (47.71%), Query Frame = 0


Query: 143 IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-D 202
           +KLYS KV  R                 G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFML 236
             L+VSS GAER L +P+D+ RF+ +P+R+ +      +  E  G+F +
Sbjct: 80  FTLKVSSAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQE--GIFRI 121

[Close]

BLAST of Lsi04G003580 vs. ExPASy Swiss-Prot
Match: Q04ZJ3 (Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) OX=355276 GN=rimP PE=3 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-04
Identity = 35/109 (32.11%), Postives = 52/109 (47.71%), Query Frame = 0


Query: 143 IKLYSFKVTPR---------------GLGCPGLEELESYSQEYKKRLDETGALGKIPD-D 202
           +KLYS KV  R                 G   L E E  S++ K+ L+        PD D
Sbjct: 20  VKLYSLKVNQRPNHSLIEVVLDNLEHPYGSVSLLECEQVSRKLKEELERIS-----PDLD 79

Query: 203 LALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFML 236
             L+VSS GAER L +P+D+ RF+ +P+R+ +      +  E  G+F +
Sbjct: 80  FTLKVSSAGAERKLHLPEDIDRFRGIPVRLVFRSGESEKNQE--GIFRI 121

[Close]

BLAST of Lsi04G003580 vs. ExPASy Swiss-Prot
Match: B0SH16 (Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=rimP PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.5e-04
Identity = 24/61 (39.34%), Postives = 39/61 (63.93%), Query Frame = 0


Query: 156 GCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMR 215
           G   LE+ E+ S+  K+ LD+ G       D  L+VSS GAER+L++P+DL RF+ + ++
Sbjct: 48  GSASLEDCETVSRRLKEELDQWGE----EFDFTLQVSSAGAERVLRLPEDLIRFQGLLVK 104

Query: 216 V 217
           +
Sbjct: 108 L 104

[Close]

BLAST of Lsi04G003580 vs. ExPASy TrEMBL
Match: A0A1S3BF38 (uncharacterized protein LOC103489189 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.0e-130
Identity = 247/303 (81.52%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPA 60
           MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  AALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE-DDDLEPELGDGGGGGGIVL 120
             LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE DDDLEPELGDGG GGG+VL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGT 240
           +EYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLY 291
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLY
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY 300

[Close]

BLAST of Lsi04G003580 vs. ExPASy TrEMBL
Match: A0A5D3CAZ4 (F4N2.17, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00170 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.5e-129
Identity = 244/291 (83.85%), Postives = 259/291 (89.00%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPA 60
           MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  AALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE-DDDLEPELGDGGGGGGIVL 120
             LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE DDDLEPELGDGG GGG+VL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGA 180
           QGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPR     G+EEL+SYS+EYKKRLDETGA
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPR-----GMEELDSYSKEYKKRLDETGA 180

Query: 181 LGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVE 240
           LG IPDDLALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVE
Sbjct: 181 LGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGSENDGVFMLDHVE 240

Query: 241 LESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC 291
           LESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLYLEC
Sbjct: 241 LESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC 286

[Close]

BLAST of Lsi04G003580 vs. ExPASy TrEMBL
Match: A0A6J1FZQ6 (uncharacterized protein LOC111449365 OS=Cucurbita moschata OX=3662 GN=LOC111449365 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 7.5e-129
Identity = 243/306 (79.41%), Postives = 261/306 (85.29%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAF 60
           M G+RIA TLLHRAR  A  SS SS   PSSIVFG++A SSQS+CSSSS     RR+HAF
Sbjct: 1   MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAF 60

Query: 61  AFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120
           AFSP+  +RL NTN SK+F+DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG
Sbjct: 61  AFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120

Query: 121 GIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEEL 180
           G+VLQGVPWGE VL LA EVLLQFGDDI LYSFK T RG             GCP LEEL
Sbjct: 121 GVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEEL 180

Query: 181 ESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLD 240
           ESYSQEYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV YIED +
Sbjct: 181 ESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGE 240

Query: 241 SRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK 290
           SRGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPL RKQK+WRLK+P+ NHKK
Sbjct: 241 SRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKVPFGNHKK 300

[Close]

BLAST of Lsi04G003580 vs. ExPASy TrEMBL
Match: A0A1S3BEL4 (uncharacterized protein LOC103489189 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.6e-126
Identity = 240/296 (81.08%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPA 60
           MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  AALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE-DDDLEPELGDGGGGGGIVL 120
             LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE DDDLEPELGDGG GGG+VL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGT 240
           +EYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK 284
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKK
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK 296

[Close]

BLAST of Lsi04G003580 vs. ExPASy TrEMBL
Match: A0A1S3BF35 (uncharacterized protein LOC103489189 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489189 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 4.6e-126
Identity = 240/296 (81.08%), Postives = 255/296 (86.15%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPA 60
           MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  AALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE-DDDLEPELGDGGGGGGIVL 120
             LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE DDDLEPELGDGG GGG+VL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGT 240
           +EYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK 284
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKK
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKK 296

[Close]

BLAST of Lsi04G003580 vs. NCBI nr
Match: XP_038891543.1 (uncharacterized protein LOC120080930 [Benincasa hispida] >XP_038891544.1 uncharacterized protein LOC120080930 [Benincasa hispida])

HSP 1 Score: 511.5 bits (1316), Expect = 4.7e-141
Identity = 264/302 (87.42%), Postives = 270/302 (89.40%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPA 60
           MRGN IAHTLLHRARIAAVSSSLSS+ APSSIVF SEATSSQSACSSSSRRDHAFAF PA
Sbjct: 1   MRGNWIAHTLLHRARIAAVSSSLSSIGAPSSIVFASEATSSQSACSSSSRRDHAFAFPPA 60

Query: 61  AALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGGGIVLQ 120
           A LRL NTNSSKDFQDE KEHNPLQYG DEG ETTDGWEEDDDLEPELGDGGGGGG+VLQ
Sbjct: 61  ATLRLFNTNSSKDFQDEGKEHNPLQYGGDEGGETTDGWEEDDDLEPELGDGGGGGGVVLQ 120

Query: 121 GVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQ 180
           GVPWGE VLLLAQEVLLQFGDDIKLYSFK TPRG             GCP LEELESYSQ
Sbjct: 121 GVPWGERVLLLAQEVLLQFGDDIKLYSFKTTPRGYIYVRLDKLSNEFGCPSLEELESYSQ 180

Query: 181 EYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTE 240
           EYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDLFRFKA+PMRVSYIE++DSRGTE
Sbjct: 181 EYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAIPMRVSYIEEVDSRGTE 240

Query: 241 NDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYL 291
           NDGV+MLD VE E E CIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLYL
Sbjct: 241 NDGVYMLDRVESEYECCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYL 300

[Close]

BLAST of Lsi04G003580 vs. NCBI nr
Match: XP_008446453.1 (PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo] >XP_016900168.1 PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo])

HSP 1 Score: 476.1 bits (1224), Expect = 2.2e-130
Identity = 247/303 (81.52%), Postives = 262/303 (86.47%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPA 60
           MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  AALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE-DDDLEPELGDGGGGGGIVL 120
             LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE DDDLEPELGDGG GGG+VL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYS 180
           QGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPRG             GCP +EEL+SYS
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPRGYIYVRLDKLSHKFGCPSMEELDSYS 180

Query: 181 QEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGT 240
           +EYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+
Sbjct: 181 KEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGS 240

Query: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLY 291
           ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLY
Sbjct: 241 ENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLY 300

[Close]

BLAST of Lsi04G003580 vs. NCBI nr
Match: KAG7013097.1 (rimP, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471.1 bits (1211), Expect = 7.0e-129
Identity = 244/306 (79.74%), Postives = 261/306 (85.29%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAF 60
           M G+RIA TLLHRAR  A  SS SS   PSSIVFG++A SSQS+CSSSS     RR+HAF
Sbjct: 1   MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAF 60

Query: 61  AFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120
           AFSP+  +RL NTN SK+F+DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG
Sbjct: 61  AFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120

Query: 121 GIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEEL 180
           G+VLQGVPWGE VL LA EVLLQFGDDI LYSFK T RG             GCP LEEL
Sbjct: 121 GVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEEL 180

Query: 181 ESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLD 240
           ESYSQEYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV YIED +
Sbjct: 181 ESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGE 240

Query: 241 SRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK 290
           SRGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPL RKQK+WRLKLP+ NHKK
Sbjct: 241 SRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKLPFGNHKK 300

[Close]

BLAST of Lsi04G003580 vs. NCBI nr
Match: TYK09031.1 (F4N2.17, putative isoform 1 [Cucumis melo var. makuwa])

HSP 1 Score: 469.9 bits (1208), Expect = 1.6e-128
Identity = 244/291 (83.85%), Postives = 259/291 (89.00%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSSRRDHAFAFSPA 60
           MRGN+IA TLL R+RI AVSS LSS+ APSS VF SEAT  Q+ CSS S RDHAF FSPA
Sbjct: 1   MRGNKIARTLLRRSRIPAVSSPLSSLGAPSSTVFASEATPFQTTCSSFSCRDHAFPFSPA 60

Query: 61  AALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEE-DDDLEPELGDGGGGGGIVL 120
             LRL +T+SSKDF+DEVKE NPLQYGR++  ETTDGWEE DDDLEPELGDGG GGG+VL
Sbjct: 61  GTLRLFHTDSSKDFRDEVKEQNPLQYGREDEGETTDGWEEDDDDLEPELGDGGDGGGVVL 120

Query: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRGLGCPGLEELESYSQEYKKRLDETGA 180
           QGVPWGEHVLLLAQEVLLQFGDDIKLYSFK TPR     G+EEL+SYS+EYKKRLDETGA
Sbjct: 121 QGVPWGEHVLLLAQEVLLQFGDDIKLYSFKATPR-----GMEELDSYSKEYKKRLDETGA 180

Query: 181 LGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVE 240
           LG IPDDLALEVSSPGAERLLKVPDDL RFKA PMRVSYIED+DSRG+ENDGVFMLDHVE
Sbjct: 181 LGNIPDDLALEVSSPGAERLLKVPDDLSRFKATPMRVSYIEDVDSRGSENDGVFMLDHVE 240

Query: 241 LESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC 291
           LESESCIWKLANVRENRDPLSKGRPL RKQKEWRLKLPY NHKKVFLYLEC
Sbjct: 241 LESESCIWKLANVRENRDPLSKGRPLTRKQKEWRLKLPYANHKKVFLYLEC 286

[Close]

BLAST of Lsi04G003580 vs. NCBI nr
Match: XP_022944994.1 (uncharacterized protein LOC111449365 [Cucurbita moschata])

HSP 1 Score: 469.9 bits (1208), Expect = 1.6e-128
Identity = 243/306 (79.41%), Postives = 261/306 (85.29%), Query Frame = 0


Query: 1   MRGNRIAHTLLHRARIAAVSSSLSSVRAPSSIVFGSEATSSQSACSSSS-----RRDHAF 60
           M G+RIA TLLHRAR  A  SS SS   PSSIVFG++A SSQS+CSSSS     RR+HAF
Sbjct: 1   MSGSRIARTLLHRARRPAAFSSFSSAGRPSSIVFGADARSSQSSCSSSSGHVHFRREHAF 60

Query: 61  AFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120
           AFSP+  +RL NTN SK+F+DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG
Sbjct: 61  AFSPSPTVRLFNTNCSKEFEDEVKEHNPLQYGRDEGEETTDGWEEDDDLEPELGDGGGGG 120

Query: 121 GIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG------------LGCPGLEEL 180
           G+VLQGVPWGE VL LA EVLLQFGDDI LYSFK T RG             GCP LEEL
Sbjct: 121 GVVLQGVPWGERVLALAHEVLLQFGDDIILYSFKTTLRGYIYVRLDKLSNEYGCPSLEEL 180

Query: 181 ESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLD 240
           ESYSQEYKKRLDETGALG IPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRV YIED +
Sbjct: 181 ESYSQEYKKRLDETGALGNIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVCYIEDGE 240

Query: 241 SRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKK 290
           SRGTENDGVFM+DHV+LESESC+WKLANV+ENRDPLSKGRPL RKQK+WRLK+P+ NHKK
Sbjct: 241 SRGTENDGVFMMDHVDLESESCVWKLANVKENRDPLSKGRPLTRKQKDWRLKVPFGNHKK 300

[Close]

BLAST of Lsi04G003580 vs. TAIR 10
Match: AT1G69210.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 243.0 bits (619), Expect = 2.9e-64
Identity = 135/265 (50.94%), Postives = 180/265 (67.92%), Query Frame = 0


Query: 39  TSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGW 98
           +SS S  SSSS        SP+ + R   T  S        E +  +Y   +  E  + W
Sbjct: 53  SSSISTFSSSSS-------SPSPSARPPKTAGSNG-----DEEDTFEYKATDDVEVIEDW 112

Query: 99  E--EDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG-- 158
           E  ED+D+E +LGDGG GGGIVL+GV WGE VL +A +VL Q   D++L++FK +PRG  
Sbjct: 113 EEDEDEDVESQLGDGGDGGGIVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYI 172

Query: 159 ----------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEVSSPGAERLLKVPD 218
                      GCP ++ELE +S+E+KKRLD+ GA   IP+DLALEVSSPGAERLL+VP+
Sbjct: 173 YVRLDKLSTEYGCPTMDELEEFSREFKKRLDDAGAEKVIPEDLALEVSSPGAERLLRVPE 232

Query: 219 DLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELESESCIWKLANVRENRDPLSKGRP 278
           DL RFK MPM VSY+E+ +SR     GVF+L+ ++ ES++C+WKLA+VRENRDP SKGRP
Sbjct: 233 DLPRFKDMPMTVSYVEETNSRKAVKSGVFLLESIDAESDNCVWKLADVRENRDPESKGRP 292

Query: 279 LNRKQKEWRLKLPYENHKKVFLYLE 290
           L+RKQK+ R+ LP+ +HKK+ LYL+
Sbjct: 293 LSRKQKDLRITLPFADHKKINLYLD 305

[Close]

BLAST of Lsi04G003580 vs. TAIR 10
Match: AT1G77122.1 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 163.7 bits (413), Expect = 2.2e-40
Identity = 92/229 (40.17%), Postives = 136/229 (59.39%), Query Frame = 0


Query: 76  DEVKEHNPLQYGRDEGEETTDGWEEDDDLEPEL--GDGGGGGGIVLQGVPWGEHVLLLAQ 135
           +E++E+       DE +E  D   E D+ E EL  GDGGGGGGI L G  W +  L LA 
Sbjct: 97  EEIQENQDELLLDDEYDEDDDDDFEFDESEEELYAGDGGGGGGIKLAGTLWDKVALALAV 156

Query: 136 EVLLQFGDDIKLYSFKVTPRG------------LGCPGLEELESYSQEYKKRLDETGALG 195
           +V   F  D+ +Y+FK  P               G P +E++E++S  Y+ +L E     
Sbjct: 157 KVCESFDGDLGIYAFKTLPNSTIQVRIERLTNKFGSPTMEDIEAFSTIYRAKLAEAELAK 216

Query: 196 KIPDDLALEVSSPGAERLLKVPDDLFRFKAMPMRVSYIEDLDSRGTENDGVFMLDHVELE 255
            IPD+++LEVSSPG ER++++P DL R+K  PM V Y    +   TE DG+F L   ++E
Sbjct: 217 SIPDNISLEVSSPGVERVVRIPQDLDRYKDRPMYVRYTN--EDTETEGDGIFRLVSFDVE 276

Query: 256 SESCIWKLANVRENRDPLSKGRPLNRKQKEWRLKLPYENHKKVFLYLEC 291
           ++ CIW +A++R NR+   KGRPL++KQ+EWRL+  +E+ + V L+ EC
Sbjct: 277 AKICIWGIADIRVNREKAGKGRPLSKKQREWRLETAFESLRLVRLHSEC 323

[Close]

BLAST of Lsi04G003580 vs. TAIR 10
Match: AT1G69210.2 (Uncharacterised protein family UPF0090 )

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-25
Identity = 73/167 (43.71%), Postives = 98/167 (58.68%), Query Frame = 0


Query: 39  TSSQSACSSSSRRDHAFAFSPAAALRLLNTNSSKDFQDEVKEHNPLQYGRDEGEETTDGW 98
           +SS S  SSSS        SP+ + R   T  S        E +  +Y   +  E  + W
Sbjct: 53  SSSISTFSSSSS-------SPSPSARPPKTAGSNG-----DEEDTFEYKATDDVEVIEDW 112

Query: 99  E--EDDDLEPELGDGGGGGGIVLQGVPWGEHVLLLAQEVLLQFGDDIKLYSFKVTPRG-- 158
           E  ED+D+E +LGDGG GGGIVL+GV WGE VL +A +VL Q   D++L++FK +PRG  
Sbjct: 113 EEDEDEDVESQLGDGGDGGGIVLKGVAWGERVLSIAAQVLKQSEKDLELFAFKTSPRGYI 172

Query: 159 ----------LGCPGLEELESYSQEYKKRLDETGALGKIPDDLALEV 192
                      GCP ++ELE +S+E+KKRLD+ GA   IP+DLALEV
Sbjct: 173 YVRLDKLSTEYGCPTMDELEEFSREFKKRLDDAGAEKVIPEDLALEV 207

The following BLAST results are available for this feature:

BLAST of Lsi04G003580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q72NX1	5.0e-05	33.64	Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemor...	[more]
Q8F7K3	5.0e-05	33.64	Ribosome maturation factor RimP OS=Leptospira interrogans serogroup Icterohaemor...	[more]
Q04U33	1.1e-04	32.11	Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovi...	[more]
Q04ZJ3	1.1e-04	32.11	Ribosome maturation factor RimP OS=Leptospira borgpetersenii serovar Hardjo-bovi...	[more]
B0SH16	2.5e-04	39.34	Ribosome maturation factor RimP OS=Leptospira biflexa serovar Patoc (strain Pato...	[more]

BLAST of Lsi04G003580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BF38	1.0e-130	81.52	uncharacterized protein LOC103489189 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3CAZ4	7.5e-129	83.85	F4N2.17, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A6J1FZQ6	7.5e-129	79.41	uncharacterized protein LOC111449365 OS=Cucurbita moschata OX=3662 GN=LOC1114493...	[more]
A0A1S3BEL4	4.6e-126	81.08	uncharacterized protein LOC103489189 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BF35	4.6e-126	81.08	uncharacterized protein LOC103489189 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lsi04G003580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891543.1	4.7e-141	87.42	uncharacterized protein LOC120080930 [Benincasa hispida] >XP_038891544.1 unchara...	[more]
XP_008446453.1	2.2e-130	81.52	PREDICTED: uncharacterized protein LOC103489189 isoform X3 [Cucumis melo] >XP_01...	[more]
KAG7013097.1	7.0e-129	79.74	rimP, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
TYK09031.1	1.6e-128	83.85	F4N2.17, putative isoform 1 [Cucumis melo var. makuwa]	[more]
XP_022944994.1	1.6e-128	79.41	uncharacterized protein LOC111449365 [Cucurbita moschata]	[more]

BLAST of Lsi04G003580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69210.1	2.9e-64	50.94	Uncharacterised protein family UPF0090	[more]
AT1G77122.1	2.2e-40	40.17	Uncharacterised protein family UPF0090	[more]
AT1G69210.2	5.9e-25	43.71	Uncharacterised protein family UPF0090	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..112
None	No IPR available	PANTHER	PTHR34544	OSJNBA0006B20.18 PROTEIN	coord: 17..289
None	No IPR available	PANTHER	PTHR34544:SF3	OS01G0594650 PROTEIN	coord: 17..289

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G003580.1	Lsi04G003580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042274	ribosomal small subunit biogenesis