Lsi04G001970 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G001970
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribose-5-phosphate isomerase
Location	chr04: 2097254 .. 2098081 (+)
RNA-Seq Expression	Lsi04G001970
Synteny	Lsi04G001970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATTCCTTATTACCGCCGATTTATTGGGTCGGAGAAATCCGCCATGGAAACCGGCATTGTGGTGCCTTCTTCTACTCCATCTGGCCTTTTGGCACCGCCATTGTCATCTGGGATTCTAACACAAGACGAATTGAAGAAGATTGCTGCGTATAAGGCCGTCGAATATGTCGAATCCGGCATGGTCCTGGGCCTTGGCACCGGCTCCACCGCCAAGCACGCCGTTGATCGAATCGGCGAGCTATTGCGCCAAGGAAAGCTTAAGAACATTATTGGAATTCCCACTTCCAAAAAGACCCACGAACAAGCCGTCTCGTTGGGAATCCCTCTCTCAGACCTAGATTCGCACCCTGTTCTTGATCTCGCAATCGACGGCGCCGATGAGGTCGATCCCCATCTCAATCTGGTGAAGGGCCGCGGGGGCTCTCTTCTGAGAGAGAAAATGGTGGAGGGTGCTTGCAAGAAGTTCGTTGTGATTGTTGATGAGTCGAAATTGGTTAAGTATGTGGGAGGCAGTGGGTTAGCCATGCCGGTGGAGATTGTTCCCTTTTGTTGGAACTTCACCGCTGTGCGGCTGCAGAAGCTGTTTGAAGGCTCTGGTTGTGTTGCAAAGCTCAGAACCTCAGGTGATAGTGGAGAACCATTTGTTACTGACAATGGCAATTACATTGTGGACTTGTATTTCAAGGAAGATATTGGAGATTTAAACGTCGCTAGTGATGAGATTTTGCGTCTTGCTGGTGTTGTTGAGCATGGAATGTTTATTGGGATGGCCACAACCTTGATTGTTGCTGGAGAACTTGGAATTACCATCAAGAATAAGTAA

mRNA sequence

ATGGCTATTCCTTATTACCGCCGATTTATTGGGTCGGAGAAATCCGCCATGGAAACCGGCATTGTGGTGCCTTCTTCTACTCCATCTGGCCTTTTGGCACCGCCATTGTCATCTGGGATTCTAACACAAGACGAATTGAAGAAGATTGCTGCGTATAAGGCCGTCGAATATGTCGAATCCGGCATGGTCCTGGGCCTTGGCACCGGCTCCACCGCCAAGCACGCCGTTGATCGAATCGGCGAGCTATTGCGCCAAGGAAAGCTTAAGAACATTATTGGAATTCCCACTTCCAAAAAGACCCACGAACAAGCCGTCTCGTTGGGAATCCCTCTCTCAGACCTAGATTCGCACCCTGTTCTTGATCTCGCAATCGACGGCGCCGATGAGGTCGATCCCCATCTCAATCTGGTGAAGGGCCGCGGGGGCTCTCTTCTGAGAGAGAAAATGGTGGAGGGTGCTTGCAAGAAGTTCGTTGTGATTGTTGATGAGTCGAAATTGGTTAAGTATGTGGGAGGCAGTGGGTTAGCCATGCCGGTGGAGATTGTTCCCTTTTGTTGGAACTTCACCGCTGTGCGGCTGCAGAAGCTGTTTGAAGGCTCTGGTTGTGTTGCAAAGCTCAGAACCTCAGGTGATAGTGGAGAACCATTTGTTACTGACAATGGCAATTACATTGTGGACTTGTATTTCAAGGAAGATATTGGAGATTTAAACGTCGCTAGTGATGAGATTTTGCGTCTTGCTGGTGTTGTTGAGCATGGAATGTTTATTGGGATGGCCACAACCTTGATTGTTGCTGGAGAACTTGGAATTACCATCAAGAATAAGTAA

Coding sequence (CDS)

ATGGCTATTCCTTATTACCGCCGATTTATTGGGTCGGAGAAATCCGCCATGGAAACCGGCATTGTGGTGCCTTCTTCTACTCCATCTGGCCTTTTGGCACCGCCATTGTCATCTGGGATTCTAACACAAGACGAATTGAAGAAGATTGCTGCGTATAAGGCCGTCGAATATGTCGAATCCGGCATGGTCCTGGGCCTTGGCACCGGCTCCACCGCCAAGCACGCCGTTGATCGAATCGGCGAGCTATTGCGCCAAGGAAAGCTTAAGAACATTATTGGAATTCCCACTTCCAAAAAGACCCACGAACAAGCCGTCTCGTTGGGAATCCCTCTCTCAGACCTAGATTCGCACCCTGTTCTTGATCTCGCAATCGACGGCGCCGATGAGGTCGATCCCCATCTCAATCTGGTGAAGGGCCGCGGGGGCTCTCTTCTGAGAGAGAAAATGGTGGAGGGTGCTTGCAAGAAGTTCGTTGTGATTGTTGATGAGTCGAAATTGGTTAAGTATGTGGGAGGCAGTGGGTTAGCCATGCCGGTGGAGATTGTTCCCTTTTGTTGGAACTTCACCGCTGTGCGGCTGCAGAAGCTGTTTGAAGGCTCTGGTTGTGTTGCAAAGCTCAGAACCTCAGGTGATAGTGGAGAACCATTTGTTACTGACAATGGCAATTACATTGTGGACTTGTATTTCAAGGAAGATATTGGAGATTTAAACGTCGCTAGTGATGAGATTTTGCGTCTTGCTGGTGTTGTTGAGCATGGAATGTTTATTGGGATGGCCACAACCTTGATTGTTGCTGGAGAACTTGGAATTACCATCAAGAATAAGTAA

Protein sequence

MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVLDLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVEIVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVASDEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK

Homology

[Close]

BLAST of Lsi04G001970 vs. ExPASy Swiss-Prot
Match: Q9ZU38 (Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 PE=1 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 3.1e-105
Identity = 198/275 (72.00%), Postives = 230/275 (83.64%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MA+ Y   FI S+KS   +   V SS P      P++   LTQDELK+IAAYKAVE+VES
Sbjct: 1   MALAYDPLFITSDKSL--SAFDVASSPPQ-----PMN---LTQDELKRIAAYKAVEFVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKL+NI+GIPTSKKT EQA+SLGIPLSDLD+HPV+
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVI 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DL+IDGADEVDP LNLVKGRGGSLLREKM+EGA KKFVVIVD+SK+VK++GGS LA+PVE
Sbjct: 121 DLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCW FTA +L+ L EG GC A LR  G+ G+ FVTDNGNYIVD++ +ED+GDL   S
Sbjct: 181 IVPFCWKFTAEKLRSLLEGYGCEANLRL-GEKGKAFVTDNGNYIVDMHVEEDMGDLGAVS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           D ILRL GVVEHGMF+ MA+T+I+AGELG+ IKNK
Sbjct: 241 DAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]

BLAST of Lsi04G001970 vs. ExPASy Swiss-Prot
Match: Q9C998 (Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 PE=1 SV=1)

HSP 1 Score: 376.7 bits (966), Expect = 2.2e-103
Identity = 190/247 (76.92%), Postives = 218/247 (88.26%), Query Frame = 0


Query: 33  APPLSSGILTQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNII 92
           APPLS+  LTQ+ELKKIAAYKAVE+VESGMV+GLGTGSTAKHAV RI ELLR+GKLK+II
Sbjct: 21  APPLSN--LTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDII 80

Query: 93  GIPTSKKTHEQAVSLGIPLSDLDSHPVLDLAIDGADEVDPHLNLVKGRGGSLLREKMVEG 152
           GIPTS  THEQAVSLGIPLSDLDSHPV+DL+IDGADEVDP LNLVKGRGGSLLREKM+EG
Sbjct: 81  GIPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEG 140

Query: 153 ACKKFVVIVDESKLVKYVGGSGLAMPVEIVPFCWNFTAVRLQKLFEGSGCVAKLR----T 212
           A KKFVVIVDESKLVKY+GGSGLA+PVE+VPFC +FT  +L++LF  SGCVAKLR    +
Sbjct: 141 ASKKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGS 200

Query: 213 SGDSGEPFVTDNGNYIVDLYFKEDIGDLNVASDEILRLAGVVEHGMFIGMATTLIVAGEL 272
           +G+   P VTDN NY+VDLY + DIGDL VAS+ ILR  GVVEHGMF+GMATTLIVAG+ 
Sbjct: 201 NGEEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKF 260

Query: 273 GITIKNK 276
           G+T+K++
Sbjct: 261 GVTVKDR 265

[Close]

BLAST of Lsi04G001970 vs. ExPASy Swiss-Prot
Match: Q9S726 (Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPI3 PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 7.4e-83
Identity = 158/272 (58.09%), Postives = 201/272 (73.90%), Query Frame = 0


Query: 9   FIGSEKSAMETGIVVPSSTPSG-----LLAPPLSSGILTQDELKKIAAYKAVEYVESGMV 68
           F+ S    + T  +   ST S        +    S  L+QD+LKK+AA KAVE ++ GMV
Sbjct: 6   FVSSSHLTLRTPSIALRSTGSSPRTSVSFSVKAQSVALSQDDLKKLAAEKAVEAIKPGMV 65

Query: 69  LGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVLDLA 128
           LGLGTGSTA  AVD+IG+LL  G+L +I+GIPTSK+T EQA SLGIPL  LD+HP +DLA
Sbjct: 66  LGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLA 125

Query: 129 IDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVEIVP 188
           IDGADEVDP+L+LVKGRGG+LLREKMVE    KF+V+ D++KLV  +GGSGLAMPVE+V 
Sbjct: 126 IDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTKLVTGLGGSGLAMPVEVVQ 185

Query: 189 FCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVASDEI 248
           FCWNF  +RLQ LF+  GC +KLR  GD G+P+VTDN NYI+DLYFK  + D   A+ EI
Sbjct: 186 FCWNFNLIRLQDLFKEFGCESKLRVDGD-GKPYVTDNSNYIIDLYFKTPLKDGFAAAKEI 245

Query: 249 LRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
            +  GVVEHG+F+GMAT++I+AG+ G+ +  K
Sbjct: 246 GKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]

BLAST of Lsi04G001970 vs. ExPASy Swiss-Prot
Match: Q8I3W2 (Ribose-5-phosphate isomerase OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PF3D7_0514600 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 7.5e-51
Identity = 107/230 (46.52%), Postives = 147/230 (63.91%), Query Frame = 0


Query: 44  DELKKIAAYKAV-EYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHE 103
           D LKKI AYKAV EYV+S M +GLGTGST  + ++RI  LL+ GKLK+++ IPTS  T  
Sbjct: 2   DSLKKIVAYKAVDEYVQSNMTIGLGTGSTVFYVLERIDNLLKSGKLKDVVCIPTSIDTEL 61

Query: 104 QAVSLGIPLSDLDSHPVLDLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVD 163
           +A  LGIPL+ L+ H  +D+ IDG DE+D +LNL+KGRGG+L+REK+V  +   F++I D
Sbjct: 62  KARKLGIPLTTLEKHSNIDITIDGTDEIDLNLNLIKGRGGALVREKLVASSSSLFIIIGD 121

Query: 164 ESKLVKYVGGSGLAMPVEIVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGN 223
           ESKL     G   A+P+EI+ F +      L K++   GC  K+R    +GE F+TDN N
Sbjct: 122 ESKLCTNGLGMTGAVPIEILTFGYEKIIENLLKIYTLKGCTYKIRKR--NGEIFITDNKN 181

Query: 224 YIVDLYFKEDIGDLNVASDEILRLAGVVEHGMFIGMATTLIVAGELGITI 273
           YIVD +F E I DL      I    GVV+HG+F+ M    +++   G  +
Sbjct: 182 YIVDFFFTEPIQDLLETCTRIKMTTGVVDHGIFVNMTNVALISKHDGTVL 229

[Close]

BLAST of Lsi04G001970 vs. ExPASy Swiss-Prot
Match: B8FL28 (Ribose-5-phosphate isomerase A OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rpiA PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 3.7e-50
Identity = 116/231 (50.22%), Postives = 152/231 (65.80%), Query Frame = 0


Query: 42  TQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTH 101
           +QD LKK AA KAVEY+ESGMV+GLG+GSTA  A+  I  L+++GKLK+I+GIP+S  T 
Sbjct: 3   SQDALKKQAAEKAVEYLESGMVVGLGSGSTATFAIHAIARLMKEGKLKDIVGIPSSTPTE 62

Query: 102 EQAVSLGIPLSDLDSHPVLDLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIV 161
           E A SLGIPL   + H V+D+ IDGADEVDP LNL+KG GG+LLREK+V  A KK ++IV
Sbjct: 63  EVARSLGIPLVGFEEHAVIDVTIDGADEVDPDLNLIKGGGGALLREKVVAQATKKNIIIV 122

Query: 162 DESKLVKYVGGSGLAMPVEIVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNG 221
           DESK+   + G+  A+PVE+VP    F      +  E  G    +R     G+ F TDN 
Sbjct: 123 DESKISDKL-GTIFALPVEVVP----FATASETRFLESLGAKVTVR-ENQLGKAFKTDNH 182

Query: 222 NYIVDLYF--KEDIGDLNVASDEILRLAGVVEHGMFIGMATTLIVAGELGI 271
           N I+D  F   +D   + +A   + + AGVVEHG+F+G    +IVAG  GI
Sbjct: 183 NRILDADFGPMDDAVKIGMA---LSQRAGVVEHGLFLGTTALVIVAGADGI 224

[Close]

BLAST of Lsi04G001970 vs. ExPASy TrEMBL
Match: A0A0A0KTB3 (Ribose-5-phosphate isomerase OS=Cucumis sativus OX=3659 GN=Csa_5G611700 PE=3 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 271/275 (98.55%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MAIPYYRRFIGS+KSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MAIPYYRRFIGSDKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTA RLQKLFEGSGCVAKLRTSG+SGEPFVTDNGNYIVDLYFKEDIGDLNVAS
Sbjct: 181 IVPFCWNFTAARLQKLFEGSGCVAKLRTSGESGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMF+GMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. ExPASy TrEMBL
Match: A0A1S3BGH9 (Ribose-5-phosphate isomerase OS=Cucumis melo OX=3656 GN=LOC103489339 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147
Identity = 268/275 (97.45%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVE ACKKFVVIVDESKLVKY+GGSGLAMPVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVECACKKFVVIVDESKLVKYLGGSGLAMPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTA RLQKLFEG GCVAKLRTSG++GEPFVTDNGNYIVDLYFKEDIGDLNVAS
Sbjct: 181 IVPFCWNFTAARLQKLFEGYGCVAKLRTSGENGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMF+GMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. ExPASy TrEMBL
Match: A0A6J1DA12 (Ribose-5-phosphate isomerase OS=Momordica charantia OX=3673 GN=LOC111018741 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 4.9e-146
Identity = 263/275 (95.64%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MAIPYYRRFIGSEKSAMETGIVVPSS PSGLLAPP+S GILTQDELKKIAAYKAVEYVES
Sbjct: 1   MAIPYYRRFIGSEKSAMETGIVVPSSAPSGLLAPPMSPGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTA+HAVDRIGELLRQGKLKNIIGIPTSK THEQAVSLGIPLSDLDSHP+L
Sbjct: 61  GMVLGLGTGSTARHAVDRIGELLRQGKLKNIIGIPTSKMTHEQAVSLGIPLSDLDSHPIL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTA+RLQKLFE SGCVAKLRTSG++GEPFVTDNGNYIVDLYFK+DIGDLNVAS
Sbjct: 181 IVPFCWNFTAMRLQKLFEASGCVAKLRTSGETGEPFVTDNGNYIVDLYFKKDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMF+GMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. ExPASy TrEMBL
Match: A0A6J1H059 (Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111458827 PE=3 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.6e-141
Identity = 259/275 (94.18%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           M  PY RRFI SEKSAMET IVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MPAPYCRRFIVSEKSAMETAIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQA+SLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQALSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKY+GGSGLA+PVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYLGGSGLALPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTAVRLQ LFE  GCVAKLRTSG++G+PFVTDN NYIVDLYFKEDIGDLN AS
Sbjct: 181 IVPFCWNFTAVRLQNLFETHGCVAKLRTSGENGQPFVTDNRNYIVDLYFKEDIGDLNAAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. ExPASy TrEMBL
Match: A0A6J1J8Z8 (Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482812 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 3.6e-141
Identity = 258/275 (93.82%), Postives = 265/275 (96.36%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           M  PY RRFI SEKSAMET I VPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MPAPYCRRFIVSEKSAMETAIAVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQA+SLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQALSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKY+GGSGLA+PVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYLGGSGLALPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTAVRLQ LF+  GCVAKLRTSG++G+PFVTDN NYIVDLYFKEDIGDLNVAS
Sbjct: 181 IVPFCWNFTAVRLQNLFQTHGCVAKLRTSGENGQPFVTDNRNYIVDLYFKEDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. NCBI nr
Match: XP_004135061.1 (probable ribose-5-phosphate isomerase 2 [Cucumis sativus] >KGN52139.1 hypothetical protein Csa_008518 [Cucumis sativus])

HSP 1 Score: 538.9 bits (1387), Expect = 2.6e-149
Identity = 271/275 (98.55%), Postives = 274/275 (99.64%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MAIPYYRRFIGS+KSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MAIPYYRRFIGSDKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTA RLQKLFEGSGCVAKLRTSG+SGEPFVTDNGNYIVDLYFKEDIGDLNVAS
Sbjct: 181 IVPFCWNFTAARLQKLFEGSGCVAKLRTSGESGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMF+GMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. NCBI nr
Match: XP_038893370.1 (probable ribose-5-phosphate isomerase 2 [Benincasa hispida])

HSP 1 Score: 533.5 bits (1373), Expect = 1.1e-147
Identity = 268/275 (97.45%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MAIPYYRRFIGSEKSAMET IVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MAIPYYRRFIGSEKSAMETAIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLR GKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRLGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKY+GGSGLAMPVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYLGGSGLAMPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTA RLQKLFEGSGCVAKLRTSG+SGEPFVTDNGNYIVDLYFKEDIGDLN+AS
Sbjct: 181 IVPFCWNFTAARLQKLFEGSGCVAKLRTSGESGEPFVTDNGNYIVDLYFKEDIGDLNIAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMF+GMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. NCBI nr
Match: XP_008446694.1 (PREDICTED: probable ribose-5-phosphate isomerase 2 [Cucumis melo])

HSP 1 Score: 531.9 bits (1369), Expect = 3.2e-147
Identity = 268/275 (97.45%), Postives = 272/275 (98.91%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVE ACKKFVVIVDESKLVKY+GGSGLAMPVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVECACKKFVVIVDESKLVKYLGGSGLAMPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTA RLQKLFEG GCVAKLRTSG++GEPFVTDNGNYIVDLYFKEDIGDLNVAS
Sbjct: 181 IVPFCWNFTAARLQKLFEGYGCVAKLRTSGENGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMF+GMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. NCBI nr
Match: XP_022150663.1 (probable ribose-5-phosphate isomerase 2 [Momordica charantia])

HSP 1 Score: 526.9 bits (1356), Expect = 1.0e-145
Identity = 263/275 (95.64%), Postives = 271/275 (98.55%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MAIPYYRRFIGSEKSAMETGIVVPSS PSGLLAPP+S GILTQDELKKIAAYKAVEYVES
Sbjct: 1   MAIPYYRRFIGSEKSAMETGIVVPSSAPSGLLAPPMSPGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTA+HAVDRIGELLRQGKLKNIIGIPTSK THEQAVSLGIPLSDLDSHP+L
Sbjct: 61  GMVLGLGTGSTARHAVDRIGELLRQGKLKNIIGIPTSKMTHEQAVSLGIPLSDLDSHPIL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTA+RLQKLFE SGCVAKLRTSG++GEPFVTDNGNYIVDLYFK+DIGDLNVAS
Sbjct: 181 IVPFCWNFTAMRLQKLFEASGCVAKLRTSGETGEPFVTDNGNYIVDLYFKKDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMF+GMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFLGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. NCBI nr
Match: XP_023512528.1 (probable ribose-5-phosphate isomerase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141
Identity = 260/275 (94.55%), Postives = 266/275 (96.73%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           M  PY RRFI SEKSAMET IVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES
Sbjct: 1   MPAPYCRRFIVSEKSAMETAIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQA+SLGIPLSDLDSHPVL
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQALSLGIPLSDLDSHPVL 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKY+GGSGLA+PVE
Sbjct: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYLGGSGLALPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCWNFTAVRLQ LFE  GCVAKLRTSG++G+PFVTDN NYIVDLYFKEDIGDLNVAS
Sbjct: 181 IVPFCWNFTAVRLQNLFETHGCVAKLRTSGENGQPFVTDNRNYIVDLYFKEDIGDLNVAS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK
Sbjct: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 275

[Close]

BLAST of Lsi04G001970 vs. TAIR 10
Match: AT2G01290.1 (ribose-5-phosphate isomerase 2 )

HSP 1 Score: 382.9 bits (982), Expect = 2.2e-106
Identity = 198/275 (72.00%), Postives = 230/275 (83.64%), Query Frame = 0


Query: 1   MAIPYYRRFIGSEKSAMETGIVVPSSTPSGLLAPPLSSGILTQDELKKIAAYKAVEYVES 60
           MA+ Y   FI S+KS   +   V SS P      P++   LTQDELK+IAAYKAVE+VES
Sbjct: 1   MALAYDPLFITSDKSL--SAFDVASSPPQ-----PMN---LTQDELKRIAAYKAVEFVES 60

Query: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVL 120
           GMVLGLGTGSTAKHAVDRIGELLRQGKL+NI+GIPTSKKT EQA+SLGIPLSDLD+HPV+
Sbjct: 61  GMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQEQALSLGIPLSDLDAHPVI 120

Query: 121 DLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVE 180
           DL+IDGADEVDP LNLVKGRGGSLLREKM+EGA KKFVVIVD+SK+VK++GGS LA+PVE
Sbjct: 121 DLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVE 180

Query: 181 IVPFCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVAS 240
           IVPFCW FTA +L+ L EG GC A LR  G+ G+ FVTDNGNYIVD++ +ED+GDL   S
Sbjct: 181 IVPFCWKFTAEKLRSLLEGYGCEANLRL-GEKGKAFVTDNGNYIVDMHVEEDMGDLGAVS 240

Query: 241 DEILRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
           D ILRL GVVEHGMF+ MA+T+I+AGELG+ IKNK
Sbjct: 241 DAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264

[Close]

BLAST of Lsi04G001970 vs. TAIR 10
Match: AT1G71100.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 376.7 bits (966), Expect = 1.6e-104
Identity = 190/247 (76.92%), Postives = 218/247 (88.26%), Query Frame = 0


Query: 33  APPLSSGILTQDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNII 92
           APPLS+  LTQ+ELKKIAAYKAVE+VESGMV+GLGTGSTAKHAV RI ELLR+GKLK+II
Sbjct: 21  APPLSN--LTQEELKKIAAYKAVEFVESGMVIGLGTGSTAKHAVARISELLREGKLKDII 80

Query: 93  GIPTSKKTHEQAVSLGIPLSDLDSHPVLDLAIDGADEVDPHLNLVKGRGGSLLREKMVEG 152
           GIPTS  THEQAVSLGIPLSDLDSHPV+DL+IDGADEVDP LNLVKGRGGSLLREKM+EG
Sbjct: 81  GIPTSTTTHEQAVSLGIPLSDLDSHPVVDLSIDGADEVDPALNLVKGRGGSLLREKMIEG 140

Query: 153 ACKKFVVIVDESKLVKYVGGSGLAMPVEIVPFCWNFTAVRLQKLFEGSGCVAKLR----T 212
           A KKFVVIVDESKLVKY+GGSGLA+PVE+VPFC +FT  +L++LF  SGCVAKLR    +
Sbjct: 141 ASKKFVVIVDESKLVKYIGGSGLAVPVEVVPFCCDFTRGKLEELFRDSGCVAKLRMKIGS 200

Query: 213 SGDSGEPFVTDNGNYIVDLYFKEDIGDLNVASDEILRLAGVVEHGMFIGMATTLIVAGEL 272
           +G+   P VTDN NY+VDLY + DIGDL VAS+ ILR  GVVEHGMF+GMATTLIVAG+ 
Sbjct: 201 NGEEAAPAVTDNRNYVVDLYLERDIGDLEVASEAILRFPGVVEHGMFLGMATTLIVAGKF 260

Query: 273 GITIKNK 276
           G+T+K++
Sbjct: 261 GVTVKDR 265

[Close]

BLAST of Lsi04G001970 vs. TAIR 10
Match: AT3G04790.1 (Ribose 5-phosphate isomerase, type A protein )

HSP 1 Score: 308.5 bits (789), Expect = 5.3e-84
Identity = 158/272 (58.09%), Postives = 201/272 (73.90%), Query Frame = 0


Query: 9   FIGSEKSAMETGIVVPSSTPSG-----LLAPPLSSGILTQDELKKIAAYKAVEYVESGMV 68
           F+ S    + T  +   ST S        +    S  L+QD+LKK+AA KAVE ++ GMV
Sbjct: 6   FVSSSHLTLRTPSIALRSTGSSPRTSVSFSVKAQSVALSQDDLKKLAAEKAVEAIKPGMV 65

Query: 69  LGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAVSLGIPLSDLDSHPVLDLA 128
           LGLGTGSTA  AVD+IG+LL  G+L +I+GIPTSK+T EQA SLGIPL  LD+HP +DLA
Sbjct: 66  LGLGTGSTAAFAVDQIGKLLSSGELYDIVGIPTSKRTEEQARSLGIPLVGLDTHPRIDLA 125

Query: 129 IDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVDESKLVKYVGGSGLAMPVEIVP 188
           IDGADEVDP+L+LVKGRGG+LLREKMVE    KF+V+ D++KLV  +GGSGLAMPVE+V 
Sbjct: 126 IDGADEVDPNLDLVKGRGGALLREKMVEAVADKFIVVADDTKLVTGLGGSGLAMPVEVVQ 185

Query: 189 FCWNFTAVRLQKLFEGSGCVAKLRTSGDSGEPFVTDNGNYIVDLYFKEDIGDLNVASDEI 248
           FCWNF  +RLQ LF+  GC +KLR  GD G+P+VTDN NYI+DLYFK  + D   A+ EI
Sbjct: 186 FCWNFNLIRLQDLFKEFGCESKLRVDGD-GKPYVTDNSNYIIDLYFKTPLKDGFAAAKEI 245

Query: 249 LRLAGVVEHGMFIGMATTLIVAGELGITIKNK 276
            +  GVVEHG+F+GMAT++I+AG+ G+ +  K
Sbjct: 246 GKFQGVVEHGLFLGMATSVIIAGKNGVEVMTK 276

[Close]

BLAST of Lsi04G001970 vs. TAIR 10
Match: AT5G44520.1 (NagB/RpiA/CoA transferase-like superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-21
Identity = 69/234 (29.49%), Postives = 115/234 (49.15%), Query Frame = 0


Query: 46  LKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAV 105
           L + A +    YV+SGM++GLG+G  +  A+  +G+ L  G L N++G+P S ++  +A 
Sbjct: 40  LLRAAHHTVDNYVKSGMIIGLGSGEASDFAIRYLGQQLGSGSLHNVVGVPMSARSASEAA 99

Query: 106 SLGIPLSDLDSHPVLDLAIDGADEVDPH-LNLVKGRGGS------LLREKMVEGACKKFV 165
             GIPL        +D A   AD V+ + L  V GR  S      +L++K +     + V
Sbjct: 100 KYGIPLEYYRDGVQIDFAFHDADAVEENTLIAVIGRRRSSQEDDYILKQKSIVKVADEAV 159

Query: 166 VIVDESKLVKYVGGSGLAMPVEIVPFCWNFTAVRLQKLFEGSGCV---AKLRTSGDSGE- 225
            ++ E    +Y  G   ++PV +    W   A  +  L+ G   V   A +   G  G  
Sbjct: 160 FMIKEE---QYKAGLEGSIPVLVQSLNWLAIAEEIDDLYLGDAEVWRRASVENEGPLGGD 219

Query: 226 -PFVTDNGNYIVDLYFKEDIGDLNVASDEILRLAGVVEHGMFIGMATTLIVAGE 268
            P VT +G+ I+D+ F   I  L   +  + ++ GVV+HG+ I    T+++A E
Sbjct: 220 FPIVTSDGHNILDVIFTTPIRSLADLATSLDKIDGVVDHGLIIKTRCTVVIAEE 270

The following BLAST results are available for this feature:

BLAST of Lsi04G001970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU38	3.1e-105	72.00	Probable ribose-5-phosphate isomerase 2 OS=Arabidopsis thaliana OX=3702 GN=RPI2 ...	[more]
Q9C998	2.2e-103	76.92	Probable ribose-5-phosphate isomerase 1 OS=Arabidopsis thaliana OX=3702 GN=RPI1 ...	[more]
Q9S726	7.4e-83	58.09	Probable ribose-5-phosphate isomerase 3, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q8I3W2	7.5e-51	46.52	Ribose-5-phosphate isomerase OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=...	[more]
B8FL28	3.7e-50	50.22	Ribose-5-phosphate isomerase A OS=Desulfatibacillum aliphaticivorans OX=218208 G...	[more]

BLAST of Lsi04G001970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTB3	1.2e-149	98.55	Ribose-5-phosphate isomerase OS=Cucumis sativus OX=3659 GN=Csa_5G611700 PE=3 SV=...	[more]
A0A1S3BGH9	1.5e-147	97.45	Ribose-5-phosphate isomerase OS=Cucumis melo OX=3656 GN=LOC103489339 PE=3 SV=1	[more]
A0A6J1DA12	4.9e-146	95.64	Ribose-5-phosphate isomerase OS=Momordica charantia OX=3673 GN=LOC111018741 PE=3...	[more]
A0A6J1H059	1.6e-141	94.18	Ribose-5-phosphate isomerase OS=Cucurbita moschata OX=3662 GN=LOC111458827 PE=3 ...	[more]
A0A6J1J8Z8	3.6e-141	93.82	Ribose-5-phosphate isomerase OS=Cucurbita maxima OX=3661 GN=LOC111482812 PE=3 SV...	[more]

BLAST of Lsi04G001970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135061.1	2.6e-149	98.55	probable ribose-5-phosphate isomerase 2 [Cucumis sativus] >KGN52139.1 hypothetic...	[more]
XP_038893370.1	1.1e-147	97.45	probable ribose-5-phosphate isomerase 2 [Benincasa hispida]	[more]
XP_008446694.1	3.2e-147	97.45	PREDICTED: probable ribose-5-phosphate isomerase 2 [Cucumis melo]	[more]
XP_022150663.1	1.0e-145	95.64	probable ribose-5-phosphate isomerase 2 [Momordica charantia]	[more]
XP_023512528.1	1.2e-141	94.55	probable ribose-5-phosphate isomerase 2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi04G001970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01290.1	2.2e-106	72.00	ribose-5-phosphate isomerase 2	[more]
AT1G71100.1	1.6e-104	76.92	Ribose 5-phosphate isomerase, type A protein	[more]
AT3G04790.1	5.3e-84	58.09	Ribose 5-phosphate isomerase, type A protein	[more]
AT5G44520.1	2.9e-21	29.49	NagB/RpiA/CoA transferase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004788	Ribose 5-phosphate isomerase, type A	PFAM	PF06026	Rib_5-P_isom_A	coord: 93..267 e-value: 5.4E-61 score: 205.2
IPR004788	Ribose 5-phosphate isomerase, type A	TIGRFAM	TIGR00021	TIGR00021	coord: 46..269 e-value: 2.5E-78 score: 260.4
IPR004788	Ribose 5-phosphate isomerase, type A	CDD	cd01398	RPI_A	coord: 46..266 e-value: 1.9343E-105 score: 303.239
None	No IPR available	GENE3D	3.40.50.1360		coord: 41..177 e-value: 2.7E-57 score: 194.4
None	No IPR available	GENE3D	3.30.70.260		coord: 178..253 e-value: 2.7E-21 score: 77.3
None	No IPR available	PANTHER	PTHR43748:SF5	ISOMERASE, PUTATIVE-RELATED	coord: 1..275
None	No IPR available	PANTHER	PTHR43748	RIBOSE-5-PHOSPHATE ISOMERASE 3, CHLOROPLASTIC-RELATED	coord: 1..275
None	No IPR available	SUPERFAMILY	75445	D-ribose-5-phosphate isomerase (RpiA), lid domain	coord: 175..256
IPR020672	Ribose-5-phosphate isomerase, type A, subgroup	HAMAP	MF_00170	Rib_5P_isom_A	coord: 43..273 score: 30.907656
IPR037171	NagB/RpiA transferase-like	SUPERFAMILY	100950	NagB/RpiA/CoA transferase-like	coord: 42..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G001970.1	Lsi04G001970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009052	pentose-phosphate shunt, non-oxidative branch
molecular_function	GO:0004751	ribose-5-phosphate isomerase activity