Lsi04G001140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi04G001140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein BTR1
Location	chr04: 1239159 .. 1246999 (-)
RNA-Seq Expression	Lsi04G001140
Synteny	Lsi04G001140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTCTACTCCCACAGCTCACCATTCTCTTCTAAAGTCCAGCCCCAAAAGCCCCAAAAATTTTCTTATTATTTTTTCTAAAAAGAAAATAATTATATATACATAAAAAAAATACAATTTGCATTTTTTAAGACGATCCTTCGATAAATAAATAAATAGCCAAAAGAAAAATAAAAAAGAAAAATATAACTGCATCTTCAACTCGAGCTTCCATTTTGGCTTTGGTGCTGAACGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCCAATTCCCCATTTCTCAACTGCTTTGCAACTCTCTCTAGCCGCCGCCGCCGCCGCCGTCGTCGTGAAGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCTTCATACGTCTCGTCTCCGGAGGCTCCTGCGAAGCGATCTCCACCGCCGCCAAAATCTCCAAACTCGGGTATCTGATCTGATTTCAATCGTTTTTTTACTCTCATTTCCAACAATTTAATGCCTACTCTCACTGTTTTGTATGATTTCCTTTTCTATGCTTGGTGTTGTTCTTGTATGTGAGTGTTTTTGTTTCAGATCGGTTTGTTTGAGGAATGATGCAATTTCGTGTTTCTTTTTTGTTCTTGTTCTACCTTCTTATTTTTCTCCTCTTGTTTTGAATTTAAACCCTAGTTTTAGGTGTTTTGTTTGATTTATTTGTGACGGCGGAGAGAATTAGAAATCGTGCAATTTCGTCCTCCATTGGCCTGGACTCCTGTTTCCTTGTCTGGAAAGCTTATAAAACGAGAGCGTGGCTTCTGGTAGGGTATTTTTGTTTTTGGTGTGGGGGAAGGGTCTGTCTATTGAGATTTATCACAGTTGACCGAATGAATTGGGAAGCTGTTGTCATTTTCTTGAAGTGCCACTGCCACCGACTCATCCGTCTATTGACAAGAACCGCACTGCGTTTCCTGGTGTGTGTCGTAATAGTCAAAAGTTCGCTATCTTTGGTGATTGGACAGGGCGTTCTTTATTTACAATCTACACTGGTAATATGTAGGTTACTTTAGGACATATGATTATGATTTATATCAAAGGCTTTAGTTCTGCCTCATTTTCAACCTTCTAGATTATATTATGAATAAGAGATCTATGTACATTTCTAATTGATAGTGCGTATGTGCCTGTACAATCTTGCGGTTAAATATTAAGATTACTCCCATTTCTGCCTGTGAATATTGTCTTACTCATCAGAATTGCTATTGTCAGATAATATGGAAAAGGCTACATACATAAGGTTTCTTGTATCAAATGCTGCGGCTGGTTCTGTAATTGGGAAAGGTGGTTCGACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCACGGAACCATGAATTTTTTCCTGGAACCACTGATAGGATCATTATGGTATCTGGATCAATTAATGAAATACTGAAGGCCATGGAACTCGTTCTGGCTAAGTTGTTGAGTGAGGTAATCTCTATGCAGTTCAAGTTCACCCTAGAATTAAAATGTTCTACTATTTGTGACTGATTAAAATTTTGTTTGCTGGTAGCTTCATGCTGAAGAAGGAGATGATGTTGAACCGAGAACAAAAGTGAGACTAATTGTTCCCCATAGTTCATGTGGAGCTATAATTGGCAAAGGAGGATCCACTATAAAGTATGGTGCCTATATTTCTTCTATTACCATTTTATTGGTTACTAATTGCTTTATAATTTACTAGCTTAAACAATTTATTATCATTTTTAATTTGGTTAAATTAAGTTCAGTTAAACTTTTAGGATTGTTTCTACTCATAGGTTCCCAAAATTTAAAAAGTATCTAATTGGTCTATAAACTTTTAATTATGAGTCTAGCAGGTCCATAGATTTTCAATTTTGTGTCTTTTAGTGAATTTTAAAGAATGTCAAATAGGTACTGTACTTGACCTATTGGACACAAAAATGGAAGTTTGGGTCCTATTAGATACGAAATTGAAAGTTTAAGGACTTATTAAACACAAAATTGAAATTGAGGGGCTTATTAAACACTTTTTGAATTTTAATGACCTATTAGACATAATCTTCAAAGATCACGGAGTAAACTACACCTTTTGATTTTAAGGTTTTAAATATATTTATTTATTATACATTATAGAAAAGAAAAATAATATCTAAGTGAACAACTTTCTCACAACACCTGGAAGGTATTTTCTTTCTAAATTTGTATGAAGGTTCACTTTCCTTGCATAGAATGTTAAAGAACTGCAGGCTTGTTTATCTAGGACTTTTTCCCTTCAACTCTATGTCTATATAGGAAATTGTGTAGAATGCAGATTTAGATCCTATTATGCTAGTTCTTGTTTACAGCTTTTATTGAAAGAAGGTACTCATTCTCTTCATAAACCGTTACTTTCACATGCATGTCCAGGAAGAAAGTACTACTTGATACATTCTTGCTGTTTTCTATTTGAAATCCACATAAATTTTAAACCTTCTAGACATGGTTGTATAATCTATGTAGAACAGATTCTATTCAAGTAAGGTCACTATTTTGTTTTGTTTTTATTTGTCTTTTTTTAAAAGAAATGAAGTGGTATTAAGAGAAAAAGAGAGGAAAATACTTTAACAGATGGAAAGCTTTCTTTGAACCTGACCTTGAGTATTTAAACCTCTATTGGCCAAAGACCACAAAACAACTGCAGAATGTATTTGTTGTGTGATTGTATTATAACGTGTTATGTGCTCAGTTTCATGAACTCATAAATGGTGTATGTTAGATGTTGATAATTTCTCACAGGAAGCAAGTAATGGTACTGTAATGATGTTGTATAAGGATTTCAGAAATATTGTACGTAACTTAGATTTTTCATTTCATGGTTAAGGAGTAAATGTTGTATCAGAGTCAGTGTTGTGTTAGTGAAGTTGGAGAGAGAGAGAGAGAGGGAGGGAGAGAGAGTACTCAGAAGTAGATGATCTCTACTTGTTGAGATTTGAGATTTGAAGATGGAATAGAAGTTTAAAGGATGGAAATAACTGTTGCCTCTAAGATGGTTATGAAATGGTCTTGTCTAAGCATATTGAGTGGCATTTCTTTCTTTTCATGCACACATTGATTTGATGAGTATCCATCTCCTACACATAGAGGATATACATAAAACAGTTCCAGTATACCTCATTCAGGAAAATGAAAATGCCAGAATTTTATGAAGAAAATTTGTCGCATCGGATAATTGACTAGTATGTGAATGGGAAAAAGAAGAGGGAAAAGAAGAAAAGTAATGCGTAGATTTACCATAACTAGGGGAATCTGAAATCTACACATATCATGCTTTATTACTCTGTCAGCTTCTTTCTTTGGCTAGAAGGTGACCTAATCCTTGACATTTTGAGAGCATCAAACAATCATTCCATTGACTTCCAGTTCAGTTTAAAATTCTTTCCAAAGGTATGGTAATTTCTTAATTGTTTTCATCTTAATTACCATGGGGGGTTGGCCTTAGTGGTAAAAGAAAAAAAACCAGGTGAATAATATAGACTTGTAAGAAATGAGTTTCAAACCATGGTGGCCACATCCCTAGGATTTAATTGTTTTAATACCCTAAAAATTACCTTTGCAACAAAATGTTGTTGGATCAGATGGTTATCATTTGAGAATGGTCAAGGCATGTACGTGCTAGCCCAGACAATCATGGATATAAAGAAAAATGTTTGCAGATTTATCTTGCCCAGTGACTTTTTCTTTATCATTTTTCATTTGTGCACAATCATGTATTTGAATTCCAAATTTCATCATTTTTATGAGGGAAGTTTATGATTTTTGTGTGAACAAAATATCATTTGATATTTGGAGCGACGGGCCAACTTGAGCCGCTGCTTAAGTTTTGAGTCTTTTGCAATGTTTGATAATCAGACTCCCAGAAGACAAAATTCTGCTTACTTCATGTGGGTGGTTATTAGTCTTTGATGACATTTTTTCATCTCATATATTCCTTCTGTAATCTTTATTTTTGAACTTATGTTTCTAAAACTTGTCAGCTGTTATTATTACTATTATTATTTTTGATATGAAACAGAACTTGTCAGCTGTTATTGGTTTGGTCAAATTCCAATGATCATTTTGGTGTTCCTTGATTTGTTTTGTAACTATACCTTCTTTGTAATTAACGTATGTTTGCTCAGTTCCTTGGGAACTCCCAATGGTGGTACATAGTTAGGATATATATTGAGGCAACTTGTTATCAAATCGATGAAACATCAGTCTGATTGAAAACTTGTATCCTGTTATTTAAGGATACCTACCTCAAAAAGACCATAAAAATGTTTTTCCCCCTTTTTTCGGGTGCTCACATACTTCTTCGATTATGCAGGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCCCAGGATAATAACTATATGGGATCCACTGATAGGTTGGTGACACTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTAATTGTCTCAAAGCTATCTGAAGACCCACATTACACCCAGTCAATGAATTATCCATTTTCATATCCGAGTAAGTCTTTGTCTGGGTTTTCTATTACATTATTGTATTATATTATTCTCAACAAAACCTACTAAATGCCCACTTGCATTTTGTGGTTCACAAAATGATCTTCATCTTATTTGGGGCACTTTCTTTCATCTGCTATATGCGATGCTGTTGCCTTGATACTGCTAAATGCTATATTTTTGTTTTTTTGTTTTTTGCATTCCATCATTTATTTCCAATCTTTTCCATTTTGCATTCACAAGTGTTGAGAATCTAGACTATTTTTTTTTTCTCTAACTGGAAATATAATTATTGGAATGTCAAATTGTAAAATATTGATGTAGTATAAATACGGAATTCTGAAGTTAAAATTTAAATATGACTCCAGGAGTTCATTTTGGGCTTGCACTTTTGAGTTTTGAGAAACTTCAGCGTTCATAGATTTGGGTCAAAAAAGAGCTGGGATAGTAGTTGATGACCTTTTGGATTCATTCACGAATTTGGAGTGCAAAAAACCTTTCAAGTTTCTGACTTACTACACATACCAGATTAGAGCCAATAGTAGAGTCTCGTTTCTATTATAAAATGATGGCAGGTCAATATATATTATTATTGTACATTTTATTTTTTTGGGGTGGGGGTGGGGGGTTTACTTGTTACACAGAGCTCACGGTTACAAAACTTATCCAAAGAATTCCCAGGAGGAGGAAACGAAACACTGTATACCCAAACAATCCGCACATGCCTGATTCAATTGCTGAAGCTGGTGTATCAGCTTATGAACTATGAAAGGAGCTGATTATGGAGTATTGTGTTGTCCTACGATTTAAGGCAACTGATGAGAGGTCCAAGTCCTCTTATCTCAAAAGAGAGAGAGAGAAAGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGTCCAAGTCAAACTGAAGAAAAAAATTTCTACTTAAGAAAAGAAAGGAAAAGATGAATGAATAGTTTTCCCACGTGTAAATTCTTGCTGTTTTGTTATTTTCCTTGCCCATTTAATCTTTTACGTGCTTTTGCTACAGCATCATACAATGCTACTACTATGAACTACGGATCCAATGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGTTTGTCCATGAACGGTAGCTTTGCTATCACTACTGTTGTCTAATTGAGTGATCTCTGGAAAATAAGTGGTTGGTGCTTTTATGCACTTTCCTTGATCTTTCTTTCACAGTGGATCTGGTATAGGCTTATGATACCAAGGCAATTTATATCGTTATTATGGGCTTTTCCAGAAAGAAAAAAAAAGAGAAATAATTAACAGTGATTTCATGTGGATGATAAATATTATCTGAACAACATTGCCATGCCATGCCATGCGTAGTATTAACTAATATGGTTGATATTGACGGTAAAATAACTGAAATCCCAACAATGTGAGGCCTCTATTATTTTATGACTTTCTTGCATTCAAGAATTTCCTAATGCCAAAATTAGGCAGTAAAGATGTCTCTTTGATACTGTATTTTTATTTATCAATGAGCAAACATGCACTGAGATAAAAGGCTAAGTCGCAGAAGAACGTGGCACTTTTCAAGTTATCATGGAGTAAAACTCAATTGGGCTTCACGAAAGAGCCATAGACAGCCTTCTTCTTTTTATAGCCTAAGGCCCTAAAGAGAGATTTTATGCTCTTTCCGTTCTTTGTTGCTGTTCAACCCGTCTCTGTGAACAAAGAATCTAGATACTGGTTCTCTTTTAACAACTATTTTTCTCCCGCCCTCCTTCCAACTGCTGAAAAATGTTAACAATGCAAGCAACCGCATAAAATTGGGACTTTATGCAATTGCATATATGATCTTCTCTGAGACTTTATGATATTGCTGACAGAAGTTCTTCTGAAATTGTCCAGGAGGAACGGAATAACTCCTTGACTATTGGCGTTTCAGATGGTCACATTGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGTTTAACCCCTCCCCCTCCAACACACATGGTTGATAACATCCAGGTCCACAAATGTAAACTCCATAAGTTGTATTATTTTTTTACATTCAAAAGCTTTTCTTATTACAGGCTAGTGGAGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGTACGGAGTTTCTTTTGGTATATTTCCTCCCCTTCATATTGTGGGTCTGCTAGTTCTTCATGGTAACGGTTGCATAGTTGATGTGGGAAAGAAATAACAGGATATTTTTAGAAGAGACCTGCAAGAGAGGTTTGGTCCCTTGTCAAATATCATGCCTGTCTTTGGGTCTCGTATGTAAAATTTTGTGTTAATTATCCATTAGGTCTTATAAATAAGTTTTCGAGCTTTTAATTGTGTCTATTATAAGTTCTTGTAAATTTTAAAAATTAATTGCTATGCTATACTATATATAAACTTAAAATCTGTCTAATGGAACCTTAAAATTTCAATTTTGTATCTTATGGGTAATTTTGGAAAAATAAAAAGGTTCCATACTTGATTTGTCCATAATTTGCAGGAAAGTTACAATTACGGGGTCACAAAGGGCCATCCGTGCCGCTGAATCGATGATTCTACAGAAAGTAGCATATGCTTCTGAGAGGGTTAGCCTTTAA

mRNA sequence

TTTCTCTACTCCCACAGCTCACCATTCTCTTCTAAAGTCCAGCCCCAAAAGCCCCAAAAATTTTCTTATTATTTTTTCTAAAAAGAAAATAATTATATATACATAAAAAAAATACAATTTGCATTTTTTAAGACGATCCTTCGATAAATAAATAAATAGCCAAAAGAAAAATAAAAAAGAAAAATATAACTGCATCTTCAACTCGAGCTTCCATTTTGGCTTTGGTGCTGAACGAGTCGAGTTTTTGCGAGCGCTCTGCCACACCCAATTCCCCATTTCTCAACTGCTTTGCAACTCTCTCTAGCCGCCGCCGCCGCCGCCGTCGTCGTGAAGAAGGAGGAGGAAGGAGAATGGAGTCCACCGAGTCTTCATACGTCTCGTCTCCGGAGGCTCCTGCGAAGCGATCTCCACCGCCGCCAAAATCTCCAAACTCGGTGCCACTGCCACCGACTCATCCGTCTATTGACAAGAACCGCACTGCGTTTCCTGGTGTGTGTCGTAATAGTCAAAAGTTCGCTATCTTTGGTGATTGGACAGGGCGTTCTTTATTTACAATCTACACTGATAATATGGAAAAGGCTACATACATAAGGTTTCTTGTATCAAATGCTGCGGCTGGTTCTGTAATTGGGAAAGGTGGTTCGACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCACGGAACCATGAATTTTTTCCTGGAACCACTGATAGGATCATTATGGTATCTGGATCAATTAATGAAATACTGAAGGCCATGGAACTCGTTCTGGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGATGATGTTGAACCGAGAACAAAAGTGAGACTAATTGTTCCCCATAGTTCATGTGGAGCTATAATTGGCAAAGGAGGATCCACTATAAAGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCCCAGGATAATAACTATATGGGATCCACTGATAGGTTGGTGACACTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTAATTGTCTCAAAGCTATCTGAAGACCCACATTACACCCAGTCAATGAATTATCCATTTTCATATCCGACATCATACAATGCTACTACTATGAACTACGGATCCAATGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGGAATAACTCCTTGACTATTGGCGTTTCAGATGGTCACATTGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGAGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGGCCATCCGTGCCGCTGAATCGATGATTCTACAGAAAGTAGCATATGCTTCTGAGAGGGTTAGCCTTTAA

Coding sequence (CDS)

ATGGAGTCCACCGAGTCTTCATACGTCTCGTCTCCGGAGGCTCCTGCGAAGCGATCTCCACCGCCGCCAAAATCTCCAAACTCGGTGCCACTGCCACCGACTCATCCGTCTATTGACAAGAACCGCACTGCGTTTCCTGGTGTGTGTCGTAATAGTCAAAAGTTCGCTATCTTTGGTGATTGGACAGGGCGTTCTTTATTTACAATCTACACTGATAATATGGAAAAGGCTACATACATAAGGTTTCTTGTATCAAATGCTGCGGCTGGTTCTGTAATTGGGAAAGGTGGTTCGACAATTAATGATTTCCAGTCACAGTCTGGTGCACGAATCCAATTGTCACGGAACCATGAATTTTTTCCTGGAACCACTGATAGGATCATTATGGTATCTGGATCAATTAATGAAATACTGAAGGCCATGGAACTCGTTCTGGCTAAGTTGTTGAGTGAGCTTCATGCTGAAGAAGGAGATGATGTTGAACCGAGAACAAAAGTGAGACTAATTGTTCCCCATAGTTCATGTGGAGCTATAATTGGCAAAGGAGGATCCACTATAAAGTCATTCATTGAGGACTCTCAAGCTGGCATTAAGATATCCCCCCAGGATAATAACTATATGGGATCCACTGATAGGTTGGTGACACTGTCTGGAACCATAGAGGAACAGATGCGAGCTACTGACTTAATTGTCTCAAAGCTATCTGAAGACCCACATTACACCCAGTCAATGAATTATCCATTTTCATATCCGACATCATACAATGCTACTACTATGAACTACGGATCCAATGGAGGAACTGGAGGGAGGTTTCAAAACAACAAGGAGGAACGGAATAACTCCTTGACTATTGGCGTTTCAGATGGTCACATTGGATTAGTTGTTGGTCGTGGTGGAAGAAACATACTGGAAATTAGTCAGGCTAGTGGAGCCAGAATTAAGATATCTGATAGGGGAGATTTCATGTCCGGAACCACTGACAGGGCCATCCGTGCCGCTGAATCGATGATTCTACAGAAAGTAGCATATGCTTCTGAGAGGGTTAGCCTTTAA

Protein sequence

MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGDWTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRAIRAAESMILQKVAYASERVSL

Homology

[Close]

BLAST of Lsi04G001140 vs. ExPASy Swiss-Prot
Match: Q9LZ82 (Protein BTR1 OS=Arabidopsis thaliana OX=3702 GN=BTR1 PE=1 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.2e-101
Identity = 210/358 (58.66%), Postives = 259/358 (72.35%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTES    SPE  AKRSP P  S  +                                
Sbjct: 1   MESTESYAAGSPEELAKRSPEPHDSSEA-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      D+ EK T+IRFLVSNAAAGSVIGKGGSTI +FQ++SGARIQLSRN EFF
Sbjct: 61  -----------DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIM+SGSI E++  +EL+L KL SELHAE+G++VEPR ++RL+VP+SSCG IIG
Sbjct: 121 PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGG+TIKSFIE+S+AGIKISP DN + G +DRLVTLSGT EEQMRA DLI++KL+ED HY
Sbjct: 181 KGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300
           +Q+++ P+SY   YN  ++NY  N G+GG++QN+KEE + ++TIGV+D HIGLV+GRGGR
Sbjct: 241 SQNVHSPYSYAAGYN--SVNYAPN-GSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGR 300

Query: 301 NILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERVS 350
           NI+EI+Q +GARIKISDRGDFMSGTTD         RAI+ AE+MI QKV  A+ER +
Sbjct: 301 NIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATERTT 312

[Close]

BLAST of Lsi04G001140 vs. ExPASy Swiss-Prot
Match: Q2PFW9 (RNA-binding protein Nova-1 OS=Macaca fascicularis OX=9541 GN=NOVA1 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 8.1e-26
Identity = 76/228 (33.33%), Postives = 130/228 (57.02%), Query Frame = 0


Query: 79  YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEIL 138
           +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ ++ G++ E L
Sbjct: 51  FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-EAL 110

Query: 139 KAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGKGGST 198
            A+   +A+ + E+       E    ++P+T        +V++IVP+S+ G IIGKGG+T
Sbjct: 111 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGAT 170

Query: 199 IKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMN 258
           +K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP     +N
Sbjct: 171 VKAIMEQSGAWVQLS-QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLN 230

Query: 259 YPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGL 294
                  SY   T    ++  TG  + N  E    +       GH  L
Sbjct: 231 ------ISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANL 270

[Close]

BLAST of Lsi04G001140 vs. ExPASy Swiss-Prot
Match: Q80WA4 (RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nova1 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-25
Identity = 77/228 (33.77%), Postives = 130/228 (57.02%), Query Frame = 0


Query: 79  YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEIL 138
           +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ ++ G+I E L
Sbjct: 50  FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 109

Query: 139 KAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGKGGST 198
            A+   +A+ + E+       E    ++P+T        +V++IVP+S+ G IIGKGG+T
Sbjct: 110 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGAT 169

Query: 199 IKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMN 258
           +K+ +E S A +++S Q  + +   +R+VT+SG  E+  +A +LI+ K+ EDP     +N
Sbjct: 170 VKAIMEQSGAWVQLS-QKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLN 229

Query: 259 YPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGL 294
                  SY   T    ++  TG  + N  E    +       GH  L
Sbjct: 230 ------ISYANVTGPVANSNPTGFPYANTAEVLPTAAAAAGLLGHANL 269

[Close]

BLAST of Lsi04G001140 vs. ExPASy Swiss-Prot
Match: Q9UNW9 (RNA-binding protein Nova-2 OS=Homo sapiens OX=9606 GN=NOVA2 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-24
Identity = 67/184 (36.41%), Postives = 115/184 (62.50%), Query Frame = 0


Query: 79  YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEIL 138
           +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ +V G+  E L
Sbjct: 34  FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTA-EAL 93

Query: 139 KAMELVLAKLLSEL-----HAEEGDDVEPRT--------KVRLIVPHSSCGAIIGKGGST 198
            A+   +A+ + E+       E  + ++P+T        + +LIVP+S+ G IIGKGG+T
Sbjct: 94  NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 153

Query: 199 IKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSMN 250
           +K+ +E S A +++S Q    +   +R+VT+SG  E+  +A   IV K+ EDP  +  +N
Sbjct: 154 VKAVMEQSGAWVQLS-QKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLN 213

HSP 2 Score: 50.4 bits (119), Expect = 4.6e-05
Identity = 30/91 (32.97%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 265 GGTGGRFQNNK---EERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDF 324
           G  GG     K   E     + I V +  +G ++G+GG+ ++E  + +GARI+IS +G+F
Sbjct: 389 GAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEF 448

Query: 325 MSGTTDR---------AIRAAESMILQKVAY 344
           + GT +R         A +AA+ +I Q+V Y
Sbjct: 449 LPGTRNRRVTITGSPAATQAAQYLISQRVTY 479

[Close]

BLAST of Lsi04G001140 vs. ExPASy Swiss-Prot
Match: Q9JKN6 (RNA-binding protein Nova-1 OS=Mus musculus OX=10090 GN=Nova1 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 3.8e-23
Identity = 77/252 (30.56%), Postives = 130/252 (51.59%), Query Frame = 0


Query: 79  YIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEIL 138
           +++ L+ + AAGS+IGKGG TI   Q ++GA I+LS++ +F+PGTT+R+ ++ G+I E L
Sbjct: 51  FLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTI-EAL 110

Query: 139 KAMELVLAKLLSEL-----HAEEGDDVEPRT----------------------------- 198
            A+   +A+ + E+       E    ++P+T                             
Sbjct: 111 NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTS 170

Query: 199 ---KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIE 258
              +V++IVP+S+ G IIGKGG+T+K+ +E S A +++S Q  + +   +R+VT+SG  E
Sbjct: 171 RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLS-QKPDGINLQERVVTVSGEPE 230

Query: 259 EQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNS 294
           +  +A +LI+ K+ EDP     +N       SY   T    ++  TG  + N  E    +
Sbjct: 231 QNRKAVELIIQKIQEDPQSGSCLN------ISYANVTGPVANSNPTGSPYANTAEVLPTA 290

[Close]

BLAST of Lsi04G001140 vs. ExPASy TrEMBL
Match: A0A1S3BFZ8 (protein BTR1 OS=Cucumis melo OX=3656 GN=LOC103489424 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 2.5e-150
Identity = 301/357 (84.31%), Postives = 302/357 (84.59%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAPAKRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNM+KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300
           TQSMNYPFSYPTSYNA  MNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR
Sbjct: 241 TQSMNYPFSYPTSYNA--MNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300

Query: 301 NILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           NILEISQASGARIKISDRGDFMSGTTD         RAIRAAESMILQKVAYASERV
Sbjct: 301 NILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERV 312

[Close]

BLAST of Lsi04G001140 vs. ExPASy TrEMBL
Match: A0A6J1CC53 (protein BTR1 OS=Momordica charantia OX=3673 GN=LOC111010213 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.5e-149
Identity = 298/357 (83.47%), Postives = 301/357 (84.31%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAPAKRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNM+KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300
           TQSMNYPFSYPTSYN  TMNYGSNGG GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGR
Sbjct: 241 TQSMNYPFSYPTSYN--TMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGR 300

Query: 301 NILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           NILEISQASGARIKISDRGDFMSGTTD         RAIR AESMI+QKVAYASERV
Sbjct: 301 NILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERV 312

[Close]

BLAST of Lsi04G001140 vs. ExPASy TrEMBL
Match: A0A0A0KWP6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621940 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 7.9e-149
Identity = 301/358 (84.08%), Postives = 302/358 (84.36%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAPAKRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSN-GGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGG 300
           TQSMNYPFSYPTS+NA  MNYGSN GGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGG
Sbjct: 241 TQSMNYPFSYPTSFNA--MNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGG 300

Query: 301 RNILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           RNILEISQASGARIKISDRGDFMSGTTD         RAIRAAESMILQKVAYASERV
Sbjct: 301 RNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERV 313

[Close]

BLAST of Lsi04G001140 vs. ExPASy TrEMBL
Match: A0A6J1JWC0 (protein BTR1-like OS=Cucurbita maxima OX=3661 GN=LOC111490250 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.1e-147
Identity = 297/359 (82.73%), Postives = 299/359 (83.29%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAP KRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPTKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSG+INEILKAMELVLAKLLSELHAEE DD EPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIK+FIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNA--TTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRG 300
           TQSMNYPFSYPTSYNA    MN GSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRG
Sbjct: 241 TQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRG 300

Query: 301 GRNILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           GRNILEISQASGARIKISDRGDFMSGTTD         RAIRAAESMILQKVAYASERV
Sbjct: 301 GRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERV 316

[Close]

BLAST of Lsi04G001140 vs. ExPASy TrEMBL
Match: A0A5A7STZ7 (Protein BTR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002290 PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 1.5e-147
Identity = 287/324 (88.58%), Postives = 289/324 (89.20%), Query Frame = 0


Query: 34  THPSIDKNRTAFPGVCRNSQKFAIFGDWTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVI 93
           THPSIDKNRT+ PGVC                      DNM+KATYIRFLVSNAAAGSVI
Sbjct: 25  THPSIDKNRTSSPGVC----------------------DNMDKATYIRFLVSNAAAGSVI 84

Query: 94  GKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELH 153
           GKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELH
Sbjct: 85  GKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILKAMELVLAKLLSELH 144

Query: 154 AEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRL 213
           AEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYM STDRL
Sbjct: 145 AEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMASTDRL 204

Query: 214 VTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQN 273
           VTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNA  MNYGSNGGTGGRFQN
Sbjct: 205 VTLSGTIEEQMRATDLIVSKLSEDPHYTQSMNYPFSYPTSYNA--MNYGSNGGTGGRFQN 264

Query: 274 NKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTD------ 333
           NKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTD      
Sbjct: 265 NKEERNNSLTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTDRKVTIT 324

Query: 334 ---RAIRAAESMILQKVAYASERV 349
              RAIRAAESMILQKVAYASERV
Sbjct: 325 GSQRAIRAAESMILQKVAYASERV 324

[Close]

BLAST of Lsi04G001140 vs. NCBI nr
Match: XP_038893255.1 (protein BTR1 [Benincasa hispida])

HSP 1 Score: 545.0 bits (1403), Expect = 4.6e-151
Identity = 303/357 (84.87%), Postives = 303/357 (84.87%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAPAKRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300
           TQSMNYPFSYPTSYNA  MNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR
Sbjct: 241 TQSMNYPFSYPTSYNA--MNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300

Query: 301 NILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           NILEISQASGARIKISDRGDFMSGTTD         RAIRAAESMILQKVAYASERV
Sbjct: 301 NILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERV 312

[Close]

BLAST of Lsi04G001140 vs. NCBI nr
Match: XP_008446807.1 (PREDICTED: protein BTR1 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 5.1e-150
Identity = 301/357 (84.31%), Postives = 302/357 (84.59%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAPAKRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNM+KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300
           TQSMNYPFSYPTSYNA  MNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR
Sbjct: 241 TQSMNYPFSYPTSYNA--MNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300

Query: 301 NILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           NILEISQASGARIKISDRGDFMSGTTD         RAIRAAESMILQKVAYASERV
Sbjct: 301 NILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERV 312

[Close]

BLAST of Lsi04G001140 vs. NCBI nr
Match: XP_022139256.1 (protein BTR1 [Momordica charantia])

HSP 1 Score: 537.7 bits (1384), Expect = 7.3e-149
Identity = 298/357 (83.47%), Postives = 301/357 (84.31%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAPAKRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNM+KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMDKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300
           TQSMNYPFSYPTSYN  TMNYGSNGG GGRFQNNKEER+NSLTIGVSDGHIGLVVGRGGR
Sbjct: 241 TQSMNYPFSYPTSYN--TMNYGSNGGAGGRFQNNKEERSNSLTIGVSDGHIGLVVGRGGR 300

Query: 301 NILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           NILEISQASGARIKISDRGDFMSGTTD         RAIR AESMI+QKVAYASERV
Sbjct: 301 NILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRTAESMIMQKVAYASERV 312

[Close]

BLAST of Lsi04G001140 vs. NCBI nr
Match: XP_011655857.1 (protein BTR1 isoform X2 [Cucumis sativus] >KGN52226.1 hypothetical protein Csa_008143 [Cucumis sativus])

HSP 1 Score: 536.6 bits (1381), Expect = 1.6e-148
Identity = 301/358 (84.08%), Postives = 302/358 (84.36%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAPAKRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPAKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIKSFIEDSQAGIKISPQDNNYM STDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSN-GGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGG 300
           TQSMNYPFSYPTS+NA  MNYGSN GGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGG
Sbjct: 241 TQSMNYPFSYPTSFNA--MNYGSNGGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGG 300

Query: 301 RNILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           RNILEISQASGARIKISDRGDFMSGTTD         RAIRAAESMILQKVAYASERV
Sbjct: 301 RNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERV 313

[Close]

BLAST of Lsi04G001140 vs. NCBI nr
Match: XP_022994607.1 (protein BTR1-like [Cucurbita maxima] >XP_023518658.1 protein BTR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 532.7 bits (1371), Expect = 2.4e-147
Identity = 297/359 (82.73%), Postives = 299/359 (83.29%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTESSYVSSPEAP KRSPPPPKSPNS                                
Sbjct: 1   MESTESSYVSSPEAPTKRSPPPPKSPNS-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF
Sbjct: 61  -----------DNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIMVSG+INEILKAMELVLAKLLSELHAEE DD EPRTKVRLIVPHSSCGAIIG
Sbjct: 121 PGTTDRIIMVSGTINEILKAMELVLAKLLSELHAEEVDDAEPRTKVRLIVPHSSCGAIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGGSTIK+FIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY
Sbjct: 181 KGGSTIKTFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240

Query: 241 TQSMNYPFSYPTSYNA--TTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRG 300
           TQSMNYPFSYPTSYNA    MN GSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRG
Sbjct: 241 TQSMNYPFSYPTSYNAMNNAMNSGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRG 300

Query: 301 GRNILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERV 349
           GRNILEISQASGARIKISDRGDFMSGTTD         RAIRAAESMILQKVAYASERV
Sbjct: 301 GRNILEISQASGARIKISDRGDFMSGTTDRKVTITGSQRAIRAAESMILQKVAYASERV 316

[Close]

BLAST of Lsi04G001140 vs. TAIR 10
Match: AT5G04430.1 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 371.3 bits (952), Expect = 8.5e-103
Identity = 210/358 (58.66%), Postives = 259/358 (72.35%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTES    SPE  AKRSP P  S  +                                
Sbjct: 1   MESTESYAAGSPEELAKRSPEPHDSSEA-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      D+ EK T+IRFLVSNAAAGSVIGKGGSTI +FQ++SGARIQLSRN EFF
Sbjct: 61  -----------DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIM+SGSI E++  +EL+L KL SELHAE+G++VEPR ++RL+VP+SSCG IIG
Sbjct: 121 PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGG+TIKSFIE+S+AGIKISP DN + G +DRLVTLSGT EEQMRA DLI++KL+ED HY
Sbjct: 181 KGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHY 240

Query: 241 TQSMNYPFSYPTSYNATTMNYGSNGGTGGRFQNNKEERNNSLTIGVSDGHIGLVVGRGGR 300
           +Q+++ P+SY   YN  ++NY  N G+GG++QN+KEE + ++TIGV+D HIGLV+GRGGR
Sbjct: 241 SQNVHSPYSYAAGYN--SVNYAPN-GSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGR 300

Query: 301 NILEISQASGARIKISDRGDFMSGTTD---------RAIRAAESMILQKVAYASERVS 350
           NI+EI+Q +GARIKISDRGDFMSGTTD         RAI+ AE+MI QKV  A+ER +
Sbjct: 301 NIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATERTT 312

[Close]

BLAST of Lsi04G001140 vs. TAIR 10
Match: AT5G04430.2 (binding to TOMV RNA 1L (long form) )

HSP 1 Score: 360.1 bits (923), Expect = 1.9e-99
Identity = 210/377 (55.70%), Postives = 260/377 (68.97%), Query Frame = 0


Query: 1   MESTESSYVSSPEAPAKRSPPPPKSPNSVPLPPTHPSIDKNRTAFPGVCRNSQKFAIFGD 60
           MESTES    SPE  AKRSP P  S  +                                
Sbjct: 1   MESTESYAAGSPEELAKRSPEPHDSSEA-------------------------------- 60

Query: 61  WTGRSLFTIYTDNMEKATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFF 120
                      D+ EK T+IRFLVSNAAAGSVIGKGGSTI +FQ++SGARIQLSRN EFF
Sbjct: 61  -----------DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFF 120

Query: 121 PGTTDRIIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 180
           PGTTDRIIM+SGSI E++  +EL+L KL SELHAE+G++VEPR ++RL+VP+SSCG IIG
Sbjct: 121 PGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIG 180

Query: 181 KGGSTIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHY 240
           KGG+TIKSFIE+S+AGIKISP DN + G +DRLVTLSGT EEQMRA DLI++KL+ED HY
Sbjct: 181 KGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRAIDLILAKLTEDDHY 240

Query: 241 TQSMNYPFSY-----------PTSY--------NATTMNYGSNGGTGGRFQNNKEERNNS 300
           +Q+++ P+SY           P +Y           ++NY  N G+GG++QN+KEE + +
Sbjct: 241 SQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPN-GSGGKYQNHKEEASTT 300

Query: 301 LTIGVSDGHIGLVVGRGGRNILEISQASGARIKISDRGDFMSGTTD---------RAIRA 350
           +TIGV+D HIGLV+GRGGRNI+EI+Q +GARIKISDRGDFMSGTTD         RAI+ 
Sbjct: 301 VTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDRKVSITGPQRAIQQ 333

[Close]

BLAST of Lsi04G001140 vs. TAIR 10
Match: AT1G33680.1 (KH domain-containing protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 55/165 (33.33%), Postives = 91/165 (55.15%), Query Frame = 0


Query: 76  KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSIN 135
           ++T  R  V ++  G++IGKGG  +   Q  SGA+IQ+ R+ E  P +  R + + G+++
Sbjct: 230 QSTTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVS 289

Query: 136 EILKAMELVLAKLLSELHAEEGDDVEPR---TKVRLIVPHSSCGAIIGKGGSTIKSFIED 195
            I KA +L+ A +++E+ A     +  R    ++ + VP    G IIG+GG TIK+    
Sbjct: 290 CIEKAEKLINA-VIAEVEAGGVPALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTK 349

Query: 196 SQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSED 238
           S+A I++ PQ N    S +R V +SG   +   AT LI   + +D
Sbjct: 350 SRARIQLIPQ-NEGDASKERTVRISGDKRQIDIATALIKDVMYQD 392

[Close]

BLAST of Lsi04G001140 vs. TAIR 10
Match: AT4G10070.1 (KH domain-containing protein )

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-12
Identity = 58/202 (28.71%), Postives = 96/202 (47.52%), Query Frame = 0


Query: 76  KATYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSIN 135
           ++T  R  V ++  G +IGKGG TI   Q  SGA+IQ+ R+ E  P +  R + + GS+ 
Sbjct: 174 QSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSV- 233

Query: 136 EILKAMELVLAKLLSELHAEEGDDVEPR-----------TKVRLIVPHSSCGAIIGKGGS 195
             +++ E +++ +++E  A     +  R            ++ + VP+   G IIG+GG 
Sbjct: 234 ACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGGE 293

Query: 196 TIKSFIEDSQAGIKISPQDNNYMGSTDRLVTLSGTIEEQMRATDLIVSKLSEDPHYTQSM 255
           TIK+    S A  ++ PQ     G  +R V +SG   +   ATD+I   ++++       
Sbjct: 294 TIKNMQTRSGARTQLIPQHAEGDGLKERTVRISGDKMQIDIATDMIKDVMNQNAR----- 353

Query: 256 NYPFSYPTSYNATTMNYGSNGG 267
             P SY   YN         GG
Sbjct: 354 --PSSYSGGYNQPAYRPQGPGG 367

[Close]

BLAST of Lsi04G001140 vs. TAIR 10
Match: AT5G46190.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-11
Identity = 82/326 (25.15%), Postives = 131/326 (40.18%), Query Frame = 0


Query: 72  DNMEKATYI-RFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMV 131
           DN +    + R L  +   GSVIGK G  IN  + ++ ARI++    + FPG ++R+I +
Sbjct: 37  DNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVV---DPFPGCSERVITI 96

Query: 132 SGSINE------------------------ILKAMELVLAKLLSELHAEEGDDVEPRTKV 191
             S++E                        +LK  + ++A L +     + D  + R + 
Sbjct: 97  FCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFR-EC 156

Query: 192 RLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDNNYMGST-----DRLVTLSGTIE 251
           RL+VP S C  +IGK GS IK+    ++A +K+  +D +    T     D +V +SG  E
Sbjct: 157 RLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETE 216

Query: 252 EQMRATDLI------VSKLSEDPHYTQSMNYPFS---------------YPTS------- 311
              +A   +      VS   + P  T     P S               YP+        
Sbjct: 217 SVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQAGLYPSQDSIFQHG 276

Query: 312 ------YNATTMNYGSNG----------------GTGGRFQNNKEERNNSLTIGVSDGHI 318
                        YG N                 G GG  ++ K     ++ +  S   I
Sbjct: 277 ANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEK----LAIKVICSSSKI 336

The following BLAST results are available for this feature:

BLAST of Lsi04G001140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZ82	1.2e-101	58.66	Protein BTR1 OS=Arabidopsis thaliana OX=3702 GN=BTR1 PE=1 SV=1	[more]
Q2PFW9	8.1e-26	33.33	RNA-binding protein Nova-1 OS=Macaca fascicularis OX=9541 GN=NOVA1 PE=2 SV=1	[more]
Q80WA4	1.4e-25	33.77	RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus OX=10116 GN=Nova1 PE=...	[more]
Q9UNW9	1.5e-24	36.41	RNA-binding protein Nova-2 OS=Homo sapiens OX=9606 GN=NOVA2 PE=1 SV=1	[more]
Q9JKN6	3.8e-23	30.56	RNA-binding protein Nova-1 OS=Mus musculus OX=10090 GN=Nova1 PE=1 SV=2	[more]

BLAST of Lsi04G001140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BFZ8	2.5e-150	84.31	protein BTR1 OS=Cucumis melo OX=3656 GN=LOC103489424 PE=4 SV=1	[more]
A0A6J1CC53	3.5e-149	83.47	protein BTR1 OS=Momordica charantia OX=3673 GN=LOC111010213 PE=4 SV=1	[more]
A0A0A0KWP6	7.9e-149	84.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G621940 PE=4 SV=1	[more]
A0A6J1JWC0	1.1e-147	82.73	protein BTR1-like OS=Cucurbita maxima OX=3661 GN=LOC111490250 PE=4 SV=1	[more]
A0A5A7STZ7	1.5e-147	88.58	Protein BTR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002290 ...	[more]

BLAST of Lsi04G001140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893255.1	4.6e-151	84.87	protein BTR1 [Benincasa hispida]	[more]
XP_008446807.1	5.1e-150	84.31	PREDICTED: protein BTR1 [Cucumis melo]	[more]
XP_022139256.1	7.3e-149	83.47	protein BTR1 [Momordica charantia]	[more]
XP_011655857.1	1.6e-148	84.08	protein BTR1 isoform X2 [Cucumis sativus] >KGN52226.1 hypothetical protein Csa_0...	[more]
XP_022994607.1	2.4e-147	82.73	protein BTR1-like [Cucurbita maxima] >XP_023518658.1 protein BTR1-like [Cucurbit...	[more]

BLAST of Lsi04G001140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04430.1	8.5e-103	58.66	binding to TOMV RNA 1L (long form)	[more]
AT5G04430.2	1.9e-99	55.70	binding to TOMV RNA 1L (long form)	[more]
AT1G33680.1	1.6e-13	33.33	KH domain-containing protein	[more]
AT4G10070.1	1.4e-12	28.71	KH domain-containing protein	[more]
AT5G46190.1	1.5e-11	25.15	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 162..235 e-value: 5.3E-11 score: 52.6 coord: 278..342 e-value: 2.7E-9 score: 46.9 coord: 76..149 e-value: 1.6E-11 score: 54.3
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 283..338 e-value: 3.8E-8 score: 33.0 coord: 80..145 e-value: 1.2E-14 score: 53.8 coord: 166..230 e-value: 2.8E-14 score: 52.7
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 268..344 e-value: 3.2E-11 score: 44.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 162..239 e-value: 1.1E-19 score: 71.9 coord: 74..151 e-value: 6.1E-20 score: 72.8
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 165..239
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 281..341
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 78..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..33
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 71..348
None	No IPR available	PANTHER	PTHR10288:SF280	BNAC02G02730D PROTEIN	coord: 71..348
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 163..230 score: 15.556364
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 77..144 score: 16.37393
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 279..348 score: 12.998854
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 166..231 e-value: 4.57249E-20 score: 80.9835
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 80..145 e-value: 2.38059E-20 score: 81.7539
None	No IPR available	CDD	cd00105	KH-I	coord: 281..338 e-value: 9.13976E-8 score: 46.3991

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G001140.1	Lsi04G001140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding