Lsi03G022800 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G022800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	pentatricopeptide repeat-containing protein At1g09900-like
Location	chr03: 33685237 .. 33687936 (-)
RNA-Seq Expression	Lsi03G022800
Synteny	Lsi03G022800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTTTCTAGGGGCATCAACTTTCAAGGATCATGAAAAACATCGGGAGATCCATGAGCCCTAGTCTTGGGCCTGCTCCTTTAGTCTCCAATAAGCCATCGAGGGAGAATAAACAAGATTCCTTGCTTGTTGCTTTCAAGCAAGCGATGAAAAGAAAACATACGGTGTTGGTCCAAATAAAAGCACAGTTAATGGCTTTAGCTTCTTCTAAGCTTCTCAGGGTAACTTTGATAATGTGGTTTAAACGGTTTACAAATTGATTTGCAGAGCATTGCCTGTTTGGTTTCTGTTGCAGTTGCAGTCGCAGTCGCAGCCAATGCCTTAACAGAAGAAATGGCAGTGATTAAGAAATTTGGGGATGAACACAGCAACTTGTTGGACCAATACGAGAGACTGAGCTTTGAAGCCCGACTAAACCAAGCAATGTTGGAGCGGAGTCTTTCGGAGCCGAGGATGCTGAGGTCTCAACCGCAGGTGCTATTTGCTGGCTCAGTTCAACTACCATACTTGATAACAACTACTAATCAGCCTAGAAAAGGACGTTGTGGATCTACATTCAACTTCAACAACTTACTCAACAACTTACTCAAACCCATTTTGGAGAGGAAGGGTAGGGCAAAGAAGGAACGCCCACATTTCAAAAACCCCATGTCTTGGGAAGCCCTCAGTAAATCCATGCGCCTTTGATTTTTTAATCTTGTCAATCTGCCTCCTTGCTTTCCCTTATCTTGTCATCATGTACTAAGATGAGGAGCAATCTTGTGTAAAATGCAATCACACAAATAGTGCTAGTTCCTATCAATCAATCACGCTTTTAAGCGATTAACAAGATATTGAGTGATTTTTTCATTTATGCAAATAAATGGCTAAACGGATTTTCTCTAAACAAATAAATTTGATTAAATTTTAAATTAATTAATAGACAAATCTCTAATTAGTTGTATTCAGGACAAAATCTAATCACGAATAACCAAATCAGACAAAATCTAATCATTTAAACAAAAACAAGATGTAATTGAACTAAACTACAATTTCCTCTGTTGACGATTTTGGGGCGTTGTTGGCCAAGAGGGGCAAGGCCCAAACAAGTTCTTGTTTGACTCTTCAGTCTTCATTCTCCAATCTCCACATTTCTGGATATAGGATAGGGACCAAATTGAAGCTCAGTTCAGTCGCGTCGCCGTGATGCCTTATGAGCTTCTCATCCAATCATCTCTGCAAAATCAATCTTTCCTTCCTTTGAAATCCAAACATAAGCGAATGCGTCTCCGTCTCCCCCTTCGCCCCTCTTTCCTCACAACTCTTCCACTCTCTTCCACATATACGCCTTTCGGTGCCAACTTGTTTGAAGAAAACAGCAGGCTAAGCACGAATAAACAATCCCATTCCATCCATACTGCCCTCCGTAGTTTCACTCCCACTAGAATCACGAGAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAACACACTGAGATTCGAAACATATCTGAATTCAATGACCTGTTCATGGATTTCGTCTCAGAAAATGAGCTCCATCTTGCCCTGAAACTGTTGTCCAATATATCATCTTATGGTTTGGTCCCAAATTCTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGAATTGGATAATGCGGGCAGGGTTTTAGAGCAAATGCTGGGAAGGGGTCATTACCCAAACGATGCCACCGTCGCATTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAAGCTTTAGAAATGGTTGAGGTGGTGGGAAGGATTGGACGCAAGCCGACAGTTAAGACATACAATTGTTTGTTGAAAGGCCTATGCTATGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGACATTTACACCTATACGGCTCTTATGGATGGCTTGTGTAAGGTAGGGCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTAGTCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCAGTGGATGGAATCTATGTCTTGAACAAAATGAAGCAAATGAACTGTATGCCCGATCGCATTACTTACACTACTCTGCTACATGGGCTGATAAAATGGGGTAAAATCCGAATAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGTCACACCATCGAAGCAAAAATGATGAATACCTTCATGAGAGCGTTAAGCAAGAGATCTTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAAGACGACTTTCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACATGATTTCAGAGGCTCTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCAATTACCATTGATGTTGTTGTTCAATCGCTTTGTCACACTCACAGCCACACGGGAAGCGCCAATGAAGCATTGTGTCTTTTGGGGCATGGAATCCCTTTCAGTACAACTTCTTTCGACTTGATAATCAATGAGCTAAATAAACAAGGAATGCGGTTAAGTGCTTCTAATGTATATGGTTTGGCTCTGAAACGAGGTGTTAACCCCACGAAAACCCCGAGATAA

mRNA sequence

ATGCAGGGGCATCAACTTTCAAGGATCATGAAAAACATCGGGAGATCCATGAGCCCTAGTCTTGGGCCTGCTCCTTTAGTCTCCAATAAGCCATCGAGGGAGAATAAACAAGATTCCTTGCTTGTTGCTTTCAAGCAAGCGATGAAAAGAAAACATACGGTGTTGGTCCAAATAAAAGCACAGTTAATGGCTTTAGCTTCTTCTAAGCTTCTCAGGAGCATTGCCTGTTTGGTTTCTGTTGCAGTTGCAGTCGCAGTCGCAGCCAATGCCTTAACAGAAGAAATGGCAGTGATTAAGAAATTTGGGGATGAACACAGCAACTTGTTGGACCAATACGAGAGACTGAGCTTTGAAGCCCGACTAAACCAAGCAATGTTGGAGCGGAGTCTTTCGGAGCCGAGGATGCTGAGGTCTCAACCGCAGGTGCTATTTGCTGGCTCAGTTCAACTACCATACTTGATAACAACTACTAATCAGCCTAGAAAAGGACGTTGTGGATCTACATTCAACTTCAACAACTTACTCAACAACTTACTCAAACCCATTTTGGAGAGGAAGGGTAGGGCAAAGAAGGAACGCCCACATTTCAAAAACCCCATGGACCAAATTGAAGCTCAGTTCAGTCGCGTCGCCGTGATGCCTTATGAGCTTCTCATCCAATCATCTCTGCAAAATCAATCTTTCCTTCCTTTGAAATCCAAACATAAGCGAATGCGTCTCCGTCTCCCCCTTCGCCCCTCTTTCCTCACAACTCTTCCACTCTCTTCCACATATACGCCTTTCGGTGCCAACTTGTTTGAAGAAAACAGCAGGCTAAGCACGAATAAACAATCCCATTCCATCCATACTGCCCTCCGTAGTTTCACTCCCACTAGAATCACGAGAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAACACACTGAGATTCGAAACATATCTGAATTCAATGACCTGTTCATGGATTTCGTCTCAGAAAATGAGCTCCATCTTGCCCTGAAACTGTTGTCCAATATATCATCTTATGGTTTGGTCCCAAATTCTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGAATTGGATAATGCGGGCAGGGTTTTAGAGCAAATGCTGGGAAGGGGTCATTACCCAAACGATGCCACCGTCGCATTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAAGCTTTAGAAATGGTTGAGGTGGTGGGAAGGATTGGACGCAAGCCGACAGTTAAGACATACAATTGTTTGTTGAAAGGCCTATGCTATGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGACATTTACACCTATACGGCTCTTATGGATGGCTTGTGTAAGGTAGGGCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTAGTCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCAGTGGATGGAATCTATGTCTTGAACAAAATGAAGCAAATGAACTGTATGCCCGATCGCATTACTTACACTACTCTGCTACATGGGCTGATAAAATGGGGTAAAATCCGAATAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGTCACACCATCGAAGCAAAAATGATGAATACCTTCATGAGAGCGTTAAGCAAGAGATCTTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAAGACGACTTTCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACATGATTTCAGAGGCTCTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCAATTACCATTGATGTTGTTGTTCAATCGCTTTGTCACACTCACAGCCACACGGGAAGCGCCAATGAAGCATTGTGTCTTTTGGGGCATGGAATCCCTTTCAGTACAACTTCTTTCGACTTGATAATCAATGAGCTAAATAAACAAGGAATGCGGTTAAGTGCTTCTAATGTATATGGTTTGGCTCTGAAACGAGGTGTTAACCCCACGAAAACCCCGAGATAA

Coding sequence (CDS)

ATGCAGGGGCATCAACTTTCAAGGATCATGAAAAACATCGGGAGATCCATGAGCCCTAGTCTTGGGCCTGCTCCTTTAGTCTCCAATAAGCCATCGAGGGAGAATAAACAAGATTCCTTGCTTGTTGCTTTCAAGCAAGCGATGAAAAGAAAACATACGGTGTTGGTCCAAATAAAAGCACAGTTAATGGCTTTAGCTTCTTCTAAGCTTCTCAGGAGCATTGCCTGTTTGGTTTCTGTTGCAGTTGCAGTCGCAGTCGCAGCCAATGCCTTAACAGAAGAAATGGCAGTGATTAAGAAATTTGGGGATGAACACAGCAACTTGTTGGACCAATACGAGAGACTGAGCTTTGAAGCCCGACTAAACCAAGCAATGTTGGAGCGGAGTCTTTCGGAGCCGAGGATGCTGAGGTCTCAACCGCAGGTGCTATTTGCTGGCTCAGTTCAACTACCATACTTGATAACAACTACTAATCAGCCTAGAAAAGGACGTTGTGGATCTACATTCAACTTCAACAACTTACTCAACAACTTACTCAAACCCATTTTGGAGAGGAAGGGTAGGGCAAAGAAGGAACGCCCACATTTCAAAAACCCCATGGACCAAATTGAAGCTCAGTTCAGTCGCGTCGCCGTGATGCCTTATGAGCTTCTCATCCAATCATCTCTGCAAAATCAATCTTTCCTTCCTTTGAAATCCAAACATAAGCGAATGCGTCTCCGTCTCCCCCTTCGCCCCTCTTTCCTCACAACTCTTCCACTCTCTTCCACATATACGCCTTTCGGTGCCAACTTGTTTGAAGAAAACAGCAGGCTAAGCACGAATAAACAATCCCATTCCATCCATACTGCCCTCCGTAGTTTCACTCCCACTAGAATCACGAGAATTAAATCACTGCCAATACCGTCGGAAGAAGGGACTGAAATTTTCATCATGTCTCAGAAACACACTGAGATTCGAAACATATCTGAATTCAATGACCTGTTCATGGATTTCGTCTCAGAAAATGAGCTCCATCTTGCCCTGAAACTGTTGTCCAATATATCATCTTATGGTTTGGTCCCAAATTCTAGAACATTTTCCATCATGATAAGGTGCTATTGCAAGAAAGGAGAATTGGATAATGCGGGCAGGGTTTTAGAGCAAATGCTGGGAAGGGGTCATTACCCAAACGATGCCACCGTCGCATTTCTCGTGAATGCTTTCTGCAAAAGGGGTAAAACGCAGAAAGCTTTAGAAATGGTTGAGGTGGTGGGAAGGATTGGACGCAAGCCGACAGTTAAGACATACAATTGTTTGTTGAAAGGCCTATGCTATGTTGGGAGAGTGGAAGAGGCATGCGAAATGGTGACGGAAATGAAGAAGGATAGCTTGATACCTGACATTTACACCTATACGGCTCTTATGGATGGCTTGTGTAAGGTAGGGCGATCAGACGAGGCAATGGAATTGCTCAATGAAGCAGAGGAAAATGGTTTAAAACCAAGTGTAGTCACTTTCAACACCCTCTTCAATGGCTACTGCAAGGAGGGCAGGCCAGTGGATGGAATCTATGTCTTGAACAAAATGAAGCAAATGAACTGTATGCCCGATCGCATTACTTACACTACTCTGCTACATGGGCTGATAAAATGGGGTAAAATCCGAATAGCCTTGAGGACATACAAGGAAATGGTTAGCTCAGGTCACACCATCGAAGCAAAAATGATGAATACCTTCATGAGAGCGTTAAGCAAGAGATCTTGGAAAGAAAAGGATCTATTGGAAGATGCCCATCAAGTGTTTGAGAAAATGAAAGACGACTTTCAAGTTATTGATCGGAGTACATATGGCCTGCTGATCCAAGCACTCTGTTCAGGAAACATGATTTCAGAGGCTCTGGCAAATTTGCATCATATGATTGGAAAAGGGTACTCTCCAAGGGCAATTACCATTGATGTTGTTGTTCAATCGCTTTGTCACACTCACAGCCACACGGGAAGCGCCAATGAAGCATTGTGTCTTTTGGGGCATGGAATCCCTTTCAGTACAACTTCTTTCGACTTGATAATCAATGAGCTAAATAAACAAGGAATGCGGTTAAGTGCTTCTAATGTATATGGTTTGGCTCTGAAACGAGGTGTTAACCCCACGAAAACCCCGAGATAA

Protein sequence

MQGHQLSRIMKNIGRSMSPSLGPAPLVSNKPSRENKQDSLLVAFKQAMKRKHTVLVQIKAQLMALASSKLLRSIACLVSVAVAVAVAANALTEEMAVIKKFGDEHSNLLDQYERLSFEARLNQAMLERSLSEPRMLRSQPQVLFAGSVQLPYLITTTNQPRKGRCGSTFNFNNLLNNLLKPILERKGRAKKERPHFKNPMDQIEAQFSRVAVMPYELLIQSSLQNQSFLPLKSKHKRMRLRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFTPTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGLALKRGVNPTKTPR

Homology

[Close]

BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.7e-46
Identity = 112/372 (30.11%), Postives = 183/372 (49.19%), Query Frame = 0


Query: 325 FNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQML 384
           +N +     S  +L LALK+L+ + S    P   T++I+I     +G +D A +++++ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 385 GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVE 444
            RG  P+  T   ++   CK G   +A EMV  +   G +P V +YN LL+ L   G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315

Query: 445 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLF 504
           E  +++T+M  +   P++ TY+ L+  LC+ G+ +EAM LL   +E GL P   +++ L 
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 505 NGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHT 564
             +C+EGR    I  L  M    C+PD + Y T+L  L K GK   AL  + ++   G +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 565 IEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMIS 624
             +   NT   AL    W   D +   H + E M +     D  TY  +I  LC   M+ 
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495

Query: 625 EALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLII 684
           EA   L  M    + P  +T ++V+   C  H    + N    ++G+G   + T++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555

Query: 685 NELNKQGMRLSA 697
             +   G R  A
Sbjct: 556 EGIGFAGYRAEA 562

[Close]

BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 8.5e-46
Identity = 115/428 (26.87%), Postives = 201/428 (46.96%), Query Frame = 0


Query: 315 KHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELD 374
           KH  + N   +  L       N ++ AL+LL  +   G VP++ TF+ +I   CK   ++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304

Query: 375 NAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV------------------- 434
            A +++ +ML RG  P+D T  +L+N  CK G+   A ++                    
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364

Query: 435 -------------EVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDI 494
                        ++V   G  P V TYN L+ G    G V  A E++ +M+     P++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424

Query: 495 YTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNK 554
           Y+YT L+DG CK+G+ DEA  +LNE   +GLKP+ V FN L + +CKE R  + + +  +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484

Query: 555 MKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSW 614
           M +  C PD  T+ +L+ GL +  +I+ AL   ++M+S G        NT + A  +R  
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG- 544

Query: 615 KEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRA 674
                +++A ++  +M      +D  TY  LI+ LC    + +A +    M+  G++P  
Sbjct: 545 ----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604

Query: 675 ITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGL 711
           I+ ++++  LC +     +      ++  G      +F+ +IN L + G       ++  
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664

[Close]

BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-44
Identity = 113/367 (30.79%), Postives = 182/367 (49.59%), Query Frame = 0


Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
           N+  +N L   +    ++    KLL +++  GL PN  +++++I   C++G +     VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298

Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 440
            +M  RG+  ++ T   L+  +CK G   +AL M   + R G  P+V TY  L+  +C  
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 441 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 500
           G +  A E + +M+   L P+  TYT L+DG  + G  +EA  +L E  +NG  PSVVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 501 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 560
           N L NG+C  G+  D I VL  MK+    PD ++Y+T+L G  +   +  ALR  +EMV 
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 561 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 620
            G   +    ++ ++        E+   ++A  ++E+M       D  TY  LI A C  
Sbjct: 479 KGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 538

Query: 621 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGH--GIPFSTT 680
             + +AL   + M+ KG  P  +T  V++  L +  S T  A   L  L +   +P   T
Sbjct: 539 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGL-NKQSRTREAKRLLLKLFYEESVPSDVT 598

Query: 681 SFDLIIN 686
              LI N
Sbjct: 599 YHTLIEN 599

[Close]

BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.6e-44
Identity = 108/391 (27.62%), Postives = 195/391 (49.87%), Query Frame = 0


Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
           ++S FN L       ++L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++G+LD A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV-EVVGRIGRKPTVKTYNCLLKGLCY 440
           EQM+  G   ++ +V  +V+ FCK G+ + AL  + E+  + G  P   T+N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 441 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVT 500
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L++       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 501 FNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMV 560
           +NTL +  CKE +  +   +   +     +PD  T+ +L+ GL      R+A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 561 SSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCS 620
           S G   +    N  + +L       K  L++A  + ++M+         TY  LI   C 
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 487

Query: 621 GNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTS 680
            N   EA      M   G S  ++T + ++  LC +     +A     ++  G      +
Sbjct: 488 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 547

Query: 681 FDLIINELNKQGMRLSASNVYGLALKRGVNP 711
           ++ ++    + G    A+++       G  P
Sbjct: 548 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

[Close]

BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.1e-42
Identity = 114/391 (29.16%), Postives = 179/391 (45.78%), Query Frame = 0


Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
           N++ +N +         +  A  LL  +   G  P+  ++S ++  YC+ GELD   +++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 440
           E M  +G  PN      ++   C+  K  +A E    + R G  P    Y  L+ G C  
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364

Query: 441 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 500
           G +  A +   EM    + PD+ TYTA++ G C++G   EA +L +E    GL+P  VTF
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424

Query: 501 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 560
             L NGYCK G   D   V N M Q  C P+ +TYTTL+ GL K G +  A     EM  
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484

Query: 561 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 620
            G        N+ +  L K        +E+A ++  + +      D  TY  L+ A C  
Sbjct: 485 IGLQPNIFTYNSIVNGLCK-----SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 544

Query: 621 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEAL-CLLGHGIPFSTTS 680
             + +A   L  M+GKG  P  +T +V++   C  H       + L  +L  GI  + T+
Sbjct: 545 GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC-LHGMLEDGEKLLNWMLAKGIAPNATT 604

Query: 681 FDLIINELNKQGMRLSASNVYGLALKRGVNP 711
           F+ ++ +   +    +A+ +Y     RGV P
Sbjct: 605 FNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629

[Close]

BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 768.8 bits (1984), Expect = 1.9e-218
Identity = 394/496 (79.44%), Postives = 426/496 (85.89%), Query Frame = 0


Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
           +RL LRPSFLTTLPLSST TPFGAN  E N R S NK+ HS+     SF           
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60

Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
               PTR+T      RIKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
           LALKLLSN++SYGLVPNSRTFSIMIRCYCKKG+LDNA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180

Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
           L KMKQMNC PDRI+Y+TLLHGLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
           R+WKEKDLLEDAHQVFEKMK++FQVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
           P AITIDV+VQ+LC    H+GSA+EALC+LGHGI FS  SFDLII ELN++GM LSA +V
Sbjct: 421 PWAITIDVMVQALC----HSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSV 480

[Close]

BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 766.1 bits (1977), Expect = 1.3e-217
Identity = 390/496 (78.63%), Postives = 424/496 (85.48%), Query Frame = 0


Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
           +R+ LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60

Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
               PTR+T       IKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
           R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDL+I ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNV 480

[Close]

BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match: A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 1.3e-195
Identity = 363/494 (73.48%), Postives = 397/494 (80.36%), Query Frame = 0


Query: 252 LPLSSTYTPFGANLFEENSRLSTNKQSHS---------------IHTALRSFTPTRIT-- 311
           LPLSST      N  EEN RLS NKQSHS               +   L    P RIT  
Sbjct: 9   LPLSST----SVNFIEENGRLSPNKQSHSNRNRGPGFGGDNVYALPFKLEIENPRRITVK 68

Query: 312 ----RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLLSNISS 371
               RI SLP PS+EGTE+FI SQK  EI+NISEFNDLF DFVS  EL LAL+LLSNISS
Sbjct: 69  NEAGRIGSLPTPSKEGTEMFITSQKDCEIQNISEFNDLFADFVSAEELDLALRLLSNISS 128

Query: 372 YGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQK 431
           YGLVPNSRTFSI IRCYCKKG+LDNA RV +QMLG G  PNDATV  LVNA C+RGK ++
Sbjct: 129 YGLVPNSRTFSIAIRCYCKKGDLDNAKRVFDQMLGSGCNPNDATVTVLVNALCRRGKIKR 188

Query: 432 ALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTYTALMD 491
           ALEMVE+VGRIGRK TV+TYNCLLKGLCYVGRVEEACEMV +MKKD L+PDIYTYTALMD
Sbjct: 189 ALEMVELVGRIGRKQTVRTYNCLLKGLCYVGRVEEACEMVAKMKKDGLVPDIYTYTALMD 248

Query: 492 GLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQMNCMP 551
           GLCKVGRSDEAMELLNEAEENGL+PSVVTFNTLFNGYCKEGRP+DGI+VL KMKQMNCMP
Sbjct: 249 GLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNCMP 308

Query: 552 DRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEKDLLED 611
           DRI+YTTLLHGLIKWGKIR ALRTYKEMVSSGH++E KMMNTFMRAL +RSWKEKDLLED
Sbjct: 309 DRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLLED 368

Query: 612 AHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITIDVVVQ 671
           AHQVFEKMK++FQVI RSTYG++I ALCSGN ISEA+ANLHHMI KGYSPRAITI+VVV+
Sbjct: 369 AHQVFEKMKNEFQVIHRSTYGVVIPALCSGNKISEAVANLHHMIRKGYSPRAITINVVVE 428

Query: 672 SLCHTHSHTGSANEALCLLG---------HGIPFSTTSFDLIINELNKQGMRLSASNVYG 716
           +LC      GS NEAL ++G         H IPFS  S+DLII+ELNKQGM   A  VYG
Sbjct: 429 ALC----RRGSTNEALGVVGLGLVGDGHHHVIPFSRVSYDLIIDELNKQGMWFDACKVYG 488

[Close]

BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match: A0A6J5VAX5 (PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40612 PE=3 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 3.3e-141
Identity = 298/632 (47.15%), Postives = 393/632 (62.18%), Query Frame = 0


Query: 90  ALTEEMAVIKKFGDEHSNLLDQYERLSFEARLNQAMLERSLSEPRMLRSQPQVLF--AGS 149
           A   + A+++ FGD+ S+LLD +ERLS E +LNQAML RSLSEP  +RSQ  +L   A S
Sbjct: 4   AEVNKQAILRTFGDDKSSLLDHFERLSVELKLNQAMLRRSLSEPTQIRSQQPLLICQAPS 63

Query: 150 VQLPYLITTTNQPRKGRCGSTFNFNNLLNNLLKPILERKGRAKKERPHFKNPMDQIEAQF 209
              P       + R+G       F+ +L  ++KPIL R    KKE P  K+P      + 
Sbjct: 64  ESEPPPPPLVTKKRRGS-----GFSKVLKKMIKPILSRMSAKKKEIPDAKDP------RT 123

Query: 210 SRVAVMPYELLIQSSLQNQSFLPLKSKHKRMRLRLPLRPSFLTTLPLSSTYTPFGANLFE 269
                   +LL+ ++L   +  P  +         PL    L      S    +G     
Sbjct: 124 HNKRTQHGKLLVFAALSCSATNPTGT--------TPLNVVSLADKTHQSYPKDYGLQSSI 183

Query: 270 ENSRLSTNKQSHSIHTALRSFTPTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFND 329
           E  +L  +        A R      I RIK+LP    E + I  + ++    + +SEFN 
Sbjct: 184 EEPKLDFDS------IASRLQVQRFIDRIKALPF--RETSVILGIFEQDGCFQTVSEFNA 243

Query: 330 LFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRG 389
           L M  V   E  +AL L + +S+YGLVP+S TFSIMIRCYC+K +LD A RVL  M+  G
Sbjct: 244 LLMALVIAKEPDIALSLFNEVSAYGLVPDSLTFSIMIRCYCEKNDLDEAIRVLVHMVENG 303

Query: 390 HYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEAC 449
            YPN AT+  L+N+ CKRG+ Q+ALE++EV+GRIG KPTV+ YNCLLKGLCYVGRVE+A 
Sbjct: 304 FYPNAATITVLINSLCKRGRLQRALEVLEVMGRIGCKPTVQIYNCLLKGLCYVGRVEDAY 363

Query: 450 EMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGY 509
           EM+  +KKD++ PDIYT+TA+MDG CKVGRSDEAMELL+EA E GL P VVTFNTLFNGY
Sbjct: 364 EMLMRIKKDAIKPDIYTFTAVMDGFCKVGRSDEAMELLDEAVEMGLTPDVVTFNTLFNGY 423

Query: 510 CKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEA 569
           CKEGRP++G+ VL +MK+ NC PD ITY+TLLHGL+KWGK R ALR YKEMV +G  ++ 
Sbjct: 424 CKEGRPMEGLNVLKQMKERNCNPDCITYSTLLHGLLKWGKTRNALRVYKEMVENGVEVDG 483

Query: 570 KMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEAL 629
           ++MN  +R L +RS KEKDLLEDAH+VFEKM+++   ID STYGL+IQ LC    +  A+
Sbjct: 484 RLMNNLVRGLCRRSRKEKDLLEDAHEVFEKMQNEVLGIDASTYGLMIQTLCMEKKMDAAV 543

Query: 630 ANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLG----HGIPFSTTSFDLI 689
             L  MIG GYSP  IT + V+++LC      G   EAL +L      G   +  S++ +
Sbjct: 544 VCLQEMIGMGYSPWIITFNNVIKTLC----VEGKVTEALLVLSIMYEGGRGTNGISYNPL 603

Query: 690 INELNKQGMRLSASNVYGLALKRGVNPTKTPR 716
           I+ LN++G  L   +VYG A+KRGV P   P+
Sbjct: 604 IHGLNRRGSFLGGCSVYGAAVKRGVIPNTKPQ 604

[Close]

BLAST of Lsi03G022800 vs. ExPASy TrEMBL
Match: A0A6J5V7D1 (PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS40610 PE=3 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 1.4e-139
Identity = 295/624 (47.28%), Postives = 389/624 (62.34%), Query Frame = 0


Query: 90  ALTEEMAVIKKFGDEHSNLLDQYERLSFEARLNQAMLERSLSEPRMLRSQPQVLF--AGS 149
           A   + A+++ FGD+ S+LLD +ERLS E +LNQAML RSLSEP  +RSQ  +L   A S
Sbjct: 13  AEVNKQAILRTFGDDKSSLLDHFERLSVELKLNQAMLRRSLSEPTQIRSQQPLLICQAPS 72

Query: 150 VQLPYLITTTNQPRKGRCGSTFNFNNLLNNLLKPILERKGRAKKERPHFKNPMDQIEAQF 209
              P       + R+G       F+ +L  ++KPIL R    KKE P  K+P      + 
Sbjct: 73  ESEPPPPPLVTKKRRGS-----GFSKVLKKMIKPILSRMSAKKKEIPDAKDP------RT 132

Query: 210 SRVAVMPYELLIQSSLQNQSFLPLKSKHKRMRLRLPLRPSFLTTLPLSSTYTPFGANLFE 269
                   +LL+ ++L   +  P  +         PL    L      S    +G     
Sbjct: 133 HNKRTQHGKLLVFAALSCSATNPTGT--------TPLNVVSLADKTHQSYPKDYGLQSSI 192

Query: 270 ENSRLSTNKQSHSIHTALRSFTPTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFND 329
           E  +L  +        A R      I RIK+LP    E + I  + ++    + +SEFN 
Sbjct: 193 EEPKLDFDS------IASRLQVQRFIDRIKALPF--RETSVILGIFEQDGCFQTVSEFNA 252

Query: 330 LFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRG 389
           L M  V   E  +AL L + +S+YGLVP+S TFSIMIRCYC+K +LD A RVL  M+  G
Sbjct: 253 LLMALVIAKEPDIALSLFNEVSAYGLVPDSLTFSIMIRCYCEKNDLDEAIRVLVHMVENG 312

Query: 390 HYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEAC 449
            YPN AT+  L+N+ CKRG+ Q+ALE++EV+GRIG KPTV+ YNCLLKGLCYVGRVE+A 
Sbjct: 313 FYPNAATITVLINSLCKRGRLQRALEVLEVMGRIGCKPTVQIYNCLLKGLCYVGRVEDAY 372

Query: 450 EMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGY 509
           EM+  +KKD++ PDIYT+TA+MDG CKVGRSDEAMELL+EA E GL P VVTFNTLFNGY
Sbjct: 373 EMLMRIKKDAIKPDIYTFTAVMDGFCKVGRSDEAMELLDEAVEMGLTPDVVTFNTLFNGY 432

Query: 510 CKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEA 569
           CKEGRP++G+ VL +MK+ NC PD ITY+TLLHGL+KWGK R ALR YKEMV +G  ++ 
Sbjct: 433 CKEGRPMEGLNVLKQMKERNCNPDCITYSTLLHGLLKWGKTRNALRVYKEMVENGVEVDG 492

Query: 570 KMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEAL 629
           ++MN  +R L +RS KEKDLLEDAH+VFEKM+++   ID STYGL+IQ LC    +  A+
Sbjct: 493 RLMNNLVRGLCRRSRKEKDLLEDAHEVFEKMQNEVLGIDASTYGLMIQTLCMEKKMDAAV 552

Query: 630 ANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLG----HGIPFSTTSFDLI 689
             L  MIG GYSP  IT + V+++LC      G   EAL +L      G   +  S++ +
Sbjct: 553 VCLQEMIGMGYSPWIITFNNVIKTLC----VEGKVTEALLVLSIMYEGGRGTNGISYNPL 605

Query: 690 INELNKQGMRLSASNVYGLALKRG 708
           I+ LN++G  L   +VYG A+KRG
Sbjct: 613 IHGLNRRGSFLGGCSVYGAAVKRG 605

[Close]

BLAST of Lsi03G022800 vs. NCBI nr
Match: XP_038904608.1 (pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida])

HSP 1 Score: 806.2 bits (2081), Expect = 2.3e-229
Identity = 413/490 (84.29%), Postives = 429/490 (87.55%), Query Frame = 0


Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
           + L L PSF TT PLS TYTPF AN   E SRLS NKQSHSI T   SFT          
Sbjct: 1   MHLALPPSFFTTRPLSYTYTPFAANFCGEYSRLSANKQSHSIDTGQHSFTHNAHASPFKL 60

Query: 300 ----PTRITRIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELHLALKLL 359
               PTR+TRIKSLPIPSEEGTEIFIMSQK TEIRN+SEFND  MDFVSENEL LALKLL
Sbjct: 61  EIEIPTRVTRIKSLPIPSEEGTEIFIMSQKRTEIRNVSEFNDRLMDFVSENELDLALKLL 120

Query: 360 SNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLVNAFCKR 419
           SNISSYGLVPNSRTFSIMIR YCKKGEL+ AG+VLEQM+GRGH PNDATV  LVNAFCKR
Sbjct: 121 SNISSYGLVPNSRTFSIMIRGYCKKGELETAGKVLEQMVGRGHNPNDATVTVLVNAFCKR 180

Query: 420 GKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDIYTY 479
           GKTQKALEMVE+VGRIGRKPTV+TYNCLLKGLCYVGRVEEACEMVTEMKKD LIPDIYTY
Sbjct: 181 GKTQKALEMVEMVGRIGRKPTVQTYNCLLKGLCYVGRVEEACEMVTEMKKDRLIPDIYTY 240

Query: 480 TALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ 539
           TALMDGLCKVGRSDEAMELL EAE NGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ
Sbjct: 241 TALMDGLCKVGRSDEAMELLIEAEGNGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNKMKQ 300

Query: 540 MNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSWKEK 599
           +NC PDRITYTTLLHGLIKWGKIRIAL TYKEMVSSGHTIEAKMMNTFMRAL +RSW EK
Sbjct: 301 INCTPDRITYTTLLHGLIKWGKIRIALSTYKEMVSSGHTIEAKMMNTFMRALCRRSWNEK 360

Query: 600 DLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRAITI 659
           DLLEDAHQVFEKMKDD+QVID+STYGLLIQALCSGNMISEALANLHHMI KGYSPRAI I
Sbjct: 361 DLLEDAHQVFEKMKDDYQVIDQSTYGLLIQALCSGNMISEALANLHHMIEKGYSPRAIII 420

Query: 660 DVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGLALK 716
           DVVVQ+LC    H GS +EAL +LGHGIPF   SFDLII+ELNKQ MR SA NVYGLALK
Sbjct: 421 DVVVQTLC----HRGSVDEALLVLGHGIPFRRFSFDLIIDELNKQEMRFSACNVYGLALK 480

[Close]

BLAST of Lsi03G022800 vs. NCBI nr
Match: XP_022982589.1 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 768.8 bits (1984), Expect = 4.0e-218
Identity = 394/496 (79.44%), Postives = 426/496 (85.89%), Query Frame = 0


Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
           +RL LRPSFLTTLPLSST TPFGAN  E N R S NK+ HS+     SF           
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEANDRRSANKRPHSVCNGGFSFNHHVHASPFKL 60

Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
               PTR+T      RIKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADRIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
           LALKLLSN++SYGLVPNSRTFSIMIRCYCKKG+LDNA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLTSYGLVPNSRTFSIMIRCYCKKGDLDNAARVLGQMLGRGCNPNDATITVLV 180

Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
           L KMKQMNC PDRI+Y+TLLHGLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
           R+WKEKDLLEDAHQVFEKMK++FQVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNEFQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
           P AITIDV+VQ+LC    H+GSA+EALC+LGHGI FS  SFDLII ELN++GM LSA +V
Sbjct: 421 PWAITIDVMVQALC----HSGSASEALCVLGHGIRFSRISFDLIIEELNEEGMWLSACSV 480

[Close]

BLAST of Lsi03G022800 vs. NCBI nr
Match: KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 766.5 bits (1978), Expect = 2.0e-217
Identity = 391/496 (78.83%), Postives = 424/496 (85.48%), Query Frame = 0


Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
           +R+ LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60

Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
               PTR+T       IKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
           R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDLII ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNV 480

[Close]

BLAST of Lsi03G022800 vs. NCBI nr
Match: XP_022935128.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata])

HSP 1 Score: 766.1 bits (1977), Expect = 2.6e-217
Identity = 390/496 (78.63%), Postives = 424/496 (85.48%), Query Frame = 0


Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
           +R+ LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRIALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHGSPFKL 60

Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
               PTR+T       IKSLPIPSEEGTEIFIMSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFIMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+L+NA RVL QMLGRG  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLENAARVLGQMLGRGCNPNDATITVLV 180

Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
           NAFCKRGK QKALEMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKALEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
           R+WKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RTWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDL+I ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLVIEELNEEGMWFSACNV 480

[Close]

BLAST of Lsi03G022800 vs. NCBI nr
Match: KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 764.6 bits (1973), Expect = 7.5e-217
Identity = 391/496 (78.83%), Postives = 421/496 (84.88%), Query Frame = 0


Query: 240 LRLPLRPSFLTTLPLSSTYTPFGANLFEENSRLSTNKQSHSIHTALRSFT---------- 299
           +RL LRPSFLTTLPLSST TPFGAN  EEN RLS NK+ HS+     SF           
Sbjct: 1   MRLALRPSFLTTLPLSSTDTPFGANFIEENGRLSANKRPHSVCNGGLSFNHHVHASPFKL 60

Query: 300 ----PTRIT------RIKSLPIPSEEGTEIFIMSQKHTEIRNISEFNDLFMDFVSENELH 359
               PTR+T       IKSLPIPSEEGTEIF MSQK  EI+NI EFNDLFM+FVSE+EL 
Sbjct: 61  GIQIPTRMTIQNVADTIKSLPIPSEEGTEIFFMSQKSCEIQNICEFNDLFMEFVSEDELD 120

Query: 360 LALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQMLGRGHYPNDATVAFLV 419
           LALKLLSN+SSYGLVPN RTFSIMIRCYCKKG+LDNA RVL QMLG G  PNDAT+  LV
Sbjct: 121 LALKLLSNLSSYGLVPNCRTFSIMIRCYCKKGDLDNAARVLGQMLGSGCNPNDATITVLV 180

Query: 420 NAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 479
           NAFCKRGK QKA EMVE+VGR GRKPTV+ YNCLLKGLCYVGRVEEACEMVTEMKKDSLI
Sbjct: 181 NAFCKRGKMQKAFEMVELVGRNGRKPTVQAYNCLLKGLCYVGRVEEACEMVTEMKKDSLI 240

Query: 480 PDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYV 539
           PDIYTYTALMDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNGYCKEGRP+DGI V
Sbjct: 241 PDIYTYTALMDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRV 300

Query: 540 LNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSK 599
           L KMKQMNC PDRI+Y+TLL GLIKWGKIR ALRTYKEMVSSGH+IE KMMNTFMRAL +
Sbjct: 301 LKKMKQMNCTPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCR 360

Query: 600 RSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYS 659
           RSWKEKDLLEDAHQVFEKMK++ QVIDRSTYGLLIQALCSGN  SEALANLHHMIGKGYS
Sbjct: 361 RSWKEKDLLEDAHQVFEKMKNELQVIDRSTYGLLIQALCSGNRTSEALANLHHMIGKGYS 420

Query: 660 PRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNV 716
           PRAITIDV+VQ+LC    H+G A+EALC+LGHGI FS  SFDLII ELN++GM  SA NV
Sbjct: 421 PRAITIDVMVQALC----HSGGASEALCVLGHGIRFSRISFDLIIEELNEEGMWFSACNV 480

[Close]

BLAST of Lsi03G022800 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-47
Identity = 112/372 (30.11%), Postives = 183/372 (49.19%), Query Frame = 0


Query: 325 FNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQML 384
           +N +     S  +L LALK+L+ + S    P   T++I+I     +G +D A +++++ML
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEML 255

Query: 385 GRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRVE 444
            RG  P+  T   ++   CK G   +A EMV  +   G +P V +YN LL+ L   G+ E
Sbjct: 256 SRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWE 315

Query: 445 EACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLF 504
           E  +++T+M  +   P++ TY+ L+  LC+ G+ +EAM LL   +E GL P   +++ L 
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375

Query: 505 NGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHT 564
             +C+EGR    I  L  M    C+PD + Y T+L  L K GK   AL  + ++   G +
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435

Query: 565 IEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMIS 624
             +   NT   AL    W   D +   H + E M +     D  TY  +I  LC   M+ 
Sbjct: 436 PNSSSYNTMFSAL----WSSGDKIRALHMILEMMSNGIDP-DEITYNSMISCLCREGMVD 495

Query: 625 EALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLII 684
           EA   L  M    + P  +T ++V+   C  H    + N    ++G+G   + T++ ++I
Sbjct: 496 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLI 555

Query: 685 NELNKQGMRLSA 697
             +   G R  A
Sbjct: 556 EGIGFAGYRAEA 562

[Close]

BLAST of Lsi03G022800 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 186.8 bits (473), Expect = 6.0e-47
Identity = 115/428 (26.87%), Postives = 201/428 (46.96%), Query Frame = 0


Query: 315 KHTEIRNISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELD 374
           KH  + N   +  L       N ++ AL+LL  +   G VP++ TF+ +I   CK   ++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304

Query: 375 NAGRVLEQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV------------------- 434
            A +++ +ML RG  P+D T  +L+N  CK G+   A ++                    
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFV 364

Query: 435 -------------EVVGRIGRKPTVKTYNCLLKGLCYVGRVEEACEMVTEMKKDSLIPDI 494
                        ++V   G  P V TYN L+ G    G V  A E++ +M+     P++
Sbjct: 365 THGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNV 424

Query: 495 YTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGYCKEGRPVDGIYVLNK 554
           Y+YT L+DG CK+G+ DEA  +LNE   +GLKP+ V FN L + +CKE R  + + +  +
Sbjct: 425 YSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484

Query: 555 MKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGHTIEAKMMNTFMRALSKRSW 614
           M +  C PD  T+ +L+ GL +  +I+ AL   ++M+S G        NT + A  +R  
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG- 544

Query: 615 KEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMISEALANLHHMIGKGYSPRA 674
                +++A ++  +M      +D  TY  LI+ LC    + +A +    M+  G++P  
Sbjct: 545 ----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604

Query: 675 ITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLIINELNKQGMRLSASNVYGL 711
           I+ ++++  LC +     +      ++  G      +F+ +IN L + G       ++  
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664

[Close]

BLAST of Lsi03G022800 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 182.6 bits (462), Expect = 1.1e-45
Identity = 113/367 (30.79%), Postives = 182/367 (49.59%), Query Frame = 0


Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
           N+  +N L   +    ++    KLL +++  GL PN  +++++I   C++G +     VL
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298

Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYV 440
            +M  RG+  ++ T   L+  +CK G   +AL M   + R G  P+V TY  L+  +C  
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358

Query: 441 GRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTF 500
           G +  A E + +M+   L P+  TYT L+DG  + G  +EA  +L E  +NG  PSVVT+
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418

Query: 501 NTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVS 560
           N L NG+C  G+  D I VL  MK+    PD ++Y+T+L G  +   +  ALR  +EMV 
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478

Query: 561 SGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSG 620
            G   +    ++ ++        E+   ++A  ++E+M       D  TY  LI A C  
Sbjct: 479 KGIKPDTITYSSLIQGFC-----EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 538

Query: 621 NMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGH--GIPFSTT 680
             + +AL   + M+ KG  P  +T  V++  L +  S T  A   L  L +   +P   T
Sbjct: 539 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGL-NKQSRTREAKRLLLKLFYEESVPSDVT 598

Query: 681 SFDLIIN 686
              LI N
Sbjct: 599 YHTLIEN 599

[Close]

BLAST of Lsi03G022800 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 2.5e-45
Identity = 108/391 (27.62%), Postives = 195/391 (49.87%), Query Frame = 0


Query: 321 NISEFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVL 380
           ++S FN L       ++L  A+ +L ++ SYGLVP+ +TF+ +++ Y ++G+LD A R+ 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 381 EQMLGRGHYPNDATVAFLVNAFCKRGKTQKALEMV-EVVGRIGRKPTVKTYNCLLKGLCY 440
           EQM+  G   ++ +V  +V+ FCK G+ + AL  + E+  + G  P   T+N L+ GLC 
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 441 VGRVEEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVT 500
            G V+ A E++  M ++   PD+YTY +++ GLCK+G   EA+E+L++       P+ VT
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 501 FNTLFNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMV 560
           +NTL +  CKE +  +   +   +     +PD  T+ +L+ GL      R+A+  ++EM 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 561 SSGHTIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCS 620
           S G   +    N  + +L       K  L++A  + ++M+         TY  LI   C 
Sbjct: 428 SKGCEPDEFTYNMLIDSLC-----SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 487

Query: 621 GNMISEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTS 680
            N   EA      M   G S  ++T + ++  LC +     +A     ++  G      +
Sbjct: 488 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYT 547

Query: 681 FDLIINELNKQGMRLSASNVYGLALKRGVNP 711
           ++ ++    + G    A+++       G  P
Sbjct: 548 YNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573

[Close]

BLAST of Lsi03G022800 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 8.2e-44
Identity = 106/368 (28.80%), Postives = 174/368 (47.28%), Query Frame = 0


Query: 324 EFNDLFMDFVSENELHLALKLLSNISSYGLVPNSRTFSIMIRCYCKKGELDNAGRVLEQM 383
           E N+     V   EL    K L N+  +G VP+    + +IR +C+ G+   A ++LE +
Sbjct: 104 ESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEIL 163

Query: 384 LGRGHYPNDATVAFLVNAFCKRGKTQKALEMVEVVGRIGRKPTVKTYNCLLKGLCYVGRV 443
            G G  P+  T   +++ +CK G+   AL    V+ R+   P V TYN +L+ LC  G++
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNAL---SVLDRMSVSPDVVTYNTILRSLCDSGKL 223

Query: 444 EEACEMVTEMKKDSLIPDIYTYTALMDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTL 503
           ++A E++  M +    PD+ TYT L++  C+      AM+LL+E  + G  P VVT+N L
Sbjct: 224 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 283

Query: 504 FNGYCKEGRPVDGIYVLNKMKQMNCMPDRITYTTLLHGLIKWGKIRIALRTYKEMVSSGH 563
            NG CKEGR  + I  LN M    C P+ IT+  +L  +   G+   A +   +M+  G 
Sbjct: 284 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 343

Query: 564 TIEAKMMNTFMRALSKRSWKEKDLLEDAHQVFEKMKDDFQVIDRSTYGLLIQALCSGNMI 623
           +      N  +  L +     K LL  A  + EKM       +  +Y  L+   C    +
Sbjct: 344 SPSVVTFNILINFLCR-----KGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 403

Query: 624 SEALANLHHMIGKGYSPRAITIDVVVQSLCHTHSHTGSANEALCLLGHGIPFSTTSFDLI 683
             A+  L  M+ +G  P  +T + ++ +LC       +      L   G      +++ +
Sbjct: 404 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTV 463

Query: 684 INELNKQG 692
           I+ L K G
Sbjct: 464 IDGLAKAG 463

The following BLAST results are available for this feature:

BLAST of Lsi03G022800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR00	1.7e-46	30.11	Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop...	[more]
Q9FMF6	8.5e-46	26.87	Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop...	[more]
Q9FIX3	1.6e-44	30.79	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	3.6e-44	27.62	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q0WVK7	1.1e-42	29.16	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]

BLAST of Lsi03G022800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J506	1.9e-218	79.44	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc...	[more]
A0A6J1F9P1	1.3e-217	78.63	pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata...	[more]
A0A6J1DW66	1.3e-195	73.48	pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti...	[more]
A0A6J5VAX5	3.3e-141	47.15	PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4...	[more]
A0A6J5V7D1	1.4e-139	47.28	PPR_long domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4...	[more]

BLAST of Lsi03G022800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904608.1	2.3e-229	84.29	pentatricopeptide repeat-containing protein At1g09900-like [Benincasa hispida]	[more]
XP_022982589.1	4.0e-218	79.44	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like [Cucur...	[more]
KAG6580429.1	2.0e-217	78.83	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022935128.1	2.6e-217	78.63	pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita moschata]	[more]
KAG7017186.1	7.5e-217	78.83	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Lsi03G022800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04760.1	1.2e-47	30.11	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G64320.1	6.0e-47	26.87	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G39710.1	1.1e-45	30.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53700.1	2.5e-45	27.62	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	8.2e-44	28.80	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 585..713 e-value: 4.9E-11 score: 44.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 491..584 e-value: 1.6E-23 score: 85.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 278..417 e-value: 3.2E-19 score: 71.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 418..490 e-value: 1.2E-22 score: 82.3
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 398..416 e-value: 0.45 score: 10.9 coord: 608..637 e-value: 0.3 score: 11.4
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 352..383 e-value: 4.1E-10 score: 39.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 498..531 e-value: 3.7E-9 score: 34.2 coord: 463..497 e-value: 1.8E-9 score: 35.2 coord: 429..462 e-value: 1.6E-8 score: 32.2 coord: 533..563 e-value: 2.2E-6 score: 25.5 coord: 359..391 e-value: 2.5E-8 score: 31.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 495..544 e-value: 6.5E-15 score: 55.1 coord: 425..474 e-value: 6.9E-17 score: 61.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 496..530 score: 11.969797
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 461..495 score: 13.811296
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 356..390 score: 12.408249
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 391..425 score: 8.812943
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 426..460 score: 11.925952
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 531..565 score: 10.588674
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 606..640 score: 10.226951
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..33
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 276..714
None	No IPR available	PANTHER	PTHR47942:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 276..714

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G022800.1	Lsi03G022800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding