Lsi03G022710 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi03G022710
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	30S ribosomal protein
Location	chr03: 33624037 .. 33626548 (+)
RNA-Seq Expression	Lsi03G022710
Synteny	Lsi03G022710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTGTGACCATTTCCCACTGAGGAAATTATTCAGCCTGATTGAATTGGGCCAAGTTCGAGATGGACCGAGAAGTAAAACCCAATTGGATCTGAAAGTAGCGGGGCCCATGGATAACTCTGGGCCCCGGGGGCCGAGCACCAAGGATCCCCGCCAGTCCAAAAGGGCGAGGAGGGAAACTGATTCCATAGAGCTCCAATTCTTGGAACGATTGGGCAAATTACCGTCGACGATGGGAGAACCTCCAATTCTATCTCTCCTCGTTTTGCTATTGTCGCTGGTTCCGATTTCGCTGGCTTACAGGCCCGGAGACATCGTTCCGATGAGCAAGATGGGACAGTATCACTCGGTTTGTTCTCCTATTCTCGTTTGTCTCCCACGGATACTTGTTTCTATCTTGTCGTTTCCGATTACTGCTCGTCTCTTTCACACTTGTATATTTTGTTTATTTCAGTCGAGAACAGTTTGGCACGATATGATAGGTCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTATTTATTCATCAATTGAGTTGTATGTGTTGTCCATCTTTCGACTTTGCTTCTTCATTTTCTGTTATGATTTAAGTAACTGAACCATTTCAATTTTTAGGTTTTGGTTCCTATACCGAAACCGGTCGGCTACACAGGAGCTGATCCGTATAAAATGTGAGATTCTTGTTCTGAAGATCGTGCTTAAATTTATTTTAGTTTACGTCAATTTCTAGGAGTGCTGAATTATTTTAAACCGATGGTTTAATTGTACATTAACTGAATCGTAAGTGTTTATATATCTTAATCTTAGAGCCTGCATTTGCTAATCAACACTCTCTCATTCGAAGCATTTCTCTCGTGGTGAACTTCTTACTATAATCATGAAAATGGATAGTGAAGACCGGTTCTTCTAGACTGAGAATAATAATATAGTCGGTCCAATCAATTTACTAGCTAGCAACCTGCTGAGGATATTCATACTCTACTGTTGTTTCGATTATTTAGTTCCATTTCTTTTAGTCTTATCGTTTATGCTGTGTGAAGAAATTTGTTGCATCTCTTTTACTTCTTTAAACATATTTTTTAACGAAGGGAATGTAGTATAGTAATTCATGTGGCATAAAACTATTTATAGTACACAACAACCAATACCAAATCTCGAAATATCTCATCTCATCATTTGCCTGGCTTTGAAAATCAGTTAGAAGTTTGCAATATTTCCTAATGCCTGCTATCTATCTTGAGTCTGTATTGTTTGCTTCACTAAGTTTTTAAATCTCTGTTGCATTGCATCTACTACGTAGAAATGGAGGAGTTTGACCCTCACAATGAGAATGTGGGTGCGTGTAGGGATTATGCTAACCTTAAGGTTTCTTTAATGCACAATCTTCTTATTTTACCTTTTGTTAGATGATATGATATTAAATTTGCCTTCAACCATCAGCTTAAGCTTTTGGGTTAATCGGTGATTTTAAGATGTTACTCGAGCAAGTTGGTTCAGGAGGTCTTGGGTTTAAACCCCTGCAATGTCTTTCCTTCCCCGTTAATATTGATTTCCACTTGTTGATCTTCTTTATATTTCAAGCCCACAATGGATGGGGAGTGTTAGATGATATGATATTAAATTTTTCTTCACTAATTAGATTAAGTTTTTGGGTCAATCGGTAATTTAAGACCTTTATTTTTATTTCTAATTGTGGTCAGCTGCTGCTCATACATTGTTATGCCATTAACTGGTTACTTTTAATTTCATGTTTGCAATGAGTAGGCTTAGTTGTTAAAAAGTCAATTGACATTTTCAATATTTATCGAGACTATAGGTCCAAATTTTTGTGATGCCTTGCTAAGATATTAATCACAAGAAGTTGTCACATATTGTGACGAAATGCTAGATATTAATACTCCATTGATTTTGCAATAACAAATAATATTGGATATAAAAGCTATCTGATGGGGATTCCTTGAAGCGCATTTGAAGTTTCAATTTAACTAGTCTCTTATGATTATTAATACATTGTGATTACTTTTGTATTTGCCACAATATTTTATCTTTTTTTGTGGATCATTGCACTTCTCGAGTTATCTGGTGGCATACATCTTATTTGAATATAGATCCTTTCAAGTTGGAAAAGAGAAGTTTCTTGTCCCATGGCTTCTTGTGATAAATCGAAAAAGTGCAGAAGTCCCAATGATTGATGTCCATTTGGTATGGTGTCTATCTATTTGTTTATTTCCACACTTCTTAGATGGACGATTCAGTCTTTCACTGTTGATATCTAACAACCATCATCAATTTATCTGTGTTGCAGAGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAATGGACATGCCTCATATCTGTATGTCCCAACTCTGTTAATGGTCGCCTCTCTTCTTCCTTAACTGATACACAGAATTATAGTTCTGTCTGTTGGATGTTGTTAATGAGGACCTAAAAAAATCGATGCACCCACAAAGCCCTTTTAACTAGCTTTTAAGATAAAC

mRNA sequence

ATTTGTGACCATTTCCCACTGAGGAAATTATTCAGCCTGATTGAATTGGGCCAAGTTCGAGATGGACCGAGAAGTAAAACCCAATTGGATCTGAAAGTAGCGGGGCCCATGGATAACTCTGGGCCCCGGGGGCCGAGCACCAAGGATCCCCGCCAGTCCAAAAGGGCGAGGAGGGAAACTGATTCCATAGAGCTCCAATTCTTGGAACGATTGGGCAAATTACCGTCGACGATGGGAGAACCTCCAATTCTATCTCTCCTCGTTTTGCTATTGTCGCTGGTTCCGATTTCGCTGGCTTACAGGCCCGGAGACATCGTTCCGATGAGCAAGATGGGACAGTATCACTCGTCGAGAACAGTTTGGCACGATATGATAGGTCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTTTTGGTTCCTATACCGAAACCGGTCGGCTACACAGGAGCTGATCCGTATAAAATATCCTTTCAAGTTGGAAAAGAGAAGTTTCTTGTCCCATGGCTTCTTGTGATAAATCGAAAAAGTGCAGAAGTCCCAATGATTGATGTCCATTTGAGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAATGGACATGCCTCATATCTGTATGTCCCAACTCTGTTAATGGTCGCCTCTCTTCTTCCTTAACTGATACACAGAATTATAGTTCTGTCTGTTGGATGTTGTTAATGAGGACCTAAAAAAATCGATGCACCCACAAAGCCCTTTTAACTAGCTTTTAAGATAAAC

Coding sequence (CDS)

ATTTGTGACCATTTCCCACTGAGGAAATTATTCAGCCTGATTGAATTGGGCCAAGTTCGAGATGGACCGAGAAGTAAAACCCAATTGGATCTGAAAGTAGCGGGGCCCATGGATAACTCTGGGCCCCGGGGGCCGAGCACCAAGGATCCCCGCCAGTCCAAAAGGGCGAGGAGGGAAACTGATTCCATAGAGCTCCAATTCTTGGAACGATTGGGCAAATTACCGTCGACGATGGGAGAACCTCCAATTCTATCTCTCCTCGTTTTGCTATTGTCGCTGGTTCCGATTTCGCTGGCTTACAGGCCCGGAGACATCGTTCCGATGAGCAAGATGGGACAGTATCACTCGTCGAGAACAGTTTGGCACGATATGATAGGTCGACATTGTCCAATTTTTGGCGTCAATCGCGAGGTTTTGGTTCCTATACCGAAACCGGTCGGCTACACAGGAGCTGATCCGTATAAAATATCCTTTCAAGTTGGAAAAGAGAAGTTTCTTGTCCCATGGCTTCTTGTGATAAATCGAAAAAGTGCAGAAGTCCCAATGATTGATGTCCATTTGAGATACTCTGGAAGTGATCTTCATGGTGTGACTGCCAAAGTAATGGACATGCCTCATATCTGTATGTCCCAACTCTGTTAA

Protein sequence

ICDHFPLRKLFSLIELGQVRDGPRSKTQLDLKVAGPMDNSGPRGPSTKDPRQSKRARRETDSIELQFLERLGKLPSTMGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGVTAKVMDMPHICMSQLC

Homology

[Close]

BLAST of Lsi03G022710 vs. ExPASy TrEMBL
Match: A0A5A7TLX6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00290 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.3e-66
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           M  PPILSLL+ LLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE
Sbjct: 1   MPNPPILSLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV+DMPHI
Sbjct: 121 TAKVVDMPHI 130

[Close]

BLAST of Lsi03G022710 vs. ExPASy TrEMBL
Match: A0A1S3B5G0 (uncharacterized protein LOC103486235 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486235 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.3e-66
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           M  PPILSLL+ LLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE
Sbjct: 1   MPNPPILSLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV+DMPHI
Sbjct: 121 TAKVVDMPHI 130

[Close]

BLAST of Lsi03G022710 vs. ExPASy TrEMBL
Match: A0A1S3B641 (uncharacterized protein LOC103486235 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486235 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.3e-66
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           M  PPILSLL+ LLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE
Sbjct: 1   MPNPPILSLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV+DMPHI
Sbjct: 121 TAKVVDMPHI 130

[Close]

BLAST of Lsi03G022710 vs. ExPASy TrEMBL
Match: A0A6J1DXJ6 (uncharacterized protein LOC111024020 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111024020 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.9e-65
Identity = 122/130 (93.85%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           MGEP ILSLLVLLL L+PIS+AYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIF VNRE
Sbjct: 1   MGEPSILSLLVLLLFLIPISMAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFAVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFL+PWLLVINRKS EVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLIPWLLVINRKSTEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV DMPHI
Sbjct: 121 TAKVADMPHI 130

[Close]

BLAST of Lsi03G022710 vs. ExPASy TrEMBL
Match: A0A6J1DU34 (uncharacterized protein LOC111024020 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024020 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.9e-65
Identity = 122/130 (93.85%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           MGEP ILSLLVLLL L+PIS+AYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIF VNRE
Sbjct: 1   MGEPSILSLLVLLLFLIPISMAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFAVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFL+PWLLVINRKS EVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLIPWLLVINRKSTEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV DMPHI
Sbjct: 121 TAKVADMPHI 130

[Close]

BLAST of Lsi03G022710 vs. NCBI nr
Match: XP_038903797.1 (uncharacterized protein LOC120090293 isoform X2 [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-67
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           MGEPPILSLLV LLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE
Sbjct: 1   MGEPPILSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINR+SAEVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRRSAEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV+DMPHI
Sbjct: 121 TAKVVDMPHI 130

[Close]

BLAST of Lsi03G022710 vs. NCBI nr
Match: XP_038903796.1 (uncharacterized protein LOC120090293 isoform X1 [Benincasa hispida])

HSP 1 Score: 266.9 bits (681), Expect = 1.5e-67
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           MGEPPILSLLV LLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE
Sbjct: 1   MGEPPILSLLVSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINR+SAEVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRRSAEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV+DMPHI
Sbjct: 121 TAKVVDMPHI 130

[Close]

BLAST of Lsi03G022710 vs. NCBI nr
Match: XP_008442332.1 (PREDICTED: uncharacterized protein LOC103486235 isoform X2 [Cucumis melo] >KAA0044220.1 uncharacterized protein E6C27_scaffold236G005800 [Cucumis melo var. makuwa] >TYK24915.1 uncharacterized protein E5676_scaffold352G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 261.9 bits (668), Expect = 4.7e-66
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           M  PPILSLL+ LLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE
Sbjct: 1   MPNPPILSLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV+DMPHI
Sbjct: 121 TAKVVDMPHI 130

[Close]

BLAST of Lsi03G022710 vs. NCBI nr
Match: XP_008442331.1 (PREDICTED: uncharacterized protein LOC103486235 isoform X1 [Cucumis melo])

HSP 1 Score: 261.9 bits (668), Expect = 4.7e-66
Identity = 125/130 (96.15%), Postives = 127/130 (97.69%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           M  PPILSLL+ LLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE
Sbjct: 1   MPNPPILSLLLSLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV+DMPHI
Sbjct: 121 TAKVVDMPHI 130

[Close]

BLAST of Lsi03G022710 vs. NCBI nr
Match: XP_022157272.1 (uncharacterized protein LOC111024020 isoform X2 [Momordica charantia])

HSP 1 Score: 258.8 bits (660), Expect = 4.0e-65
Identity = 122/130 (93.85%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 78  MGEPPILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNRE 137
           MGEP ILSLLVLLL L+PIS+AYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIF VNRE
Sbjct: 1   MGEPSILSLLVLLLFLIPISMAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFAVNRE 60

Query: 138 VLVPIPKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGV 197
           VLVPIPKPVGYTGADPYKISFQVGKEKFL+PWLLVINRKS EVPMIDVHLRYSGSDLHGV
Sbjct: 61  VLVPIPKPVGYTGADPYKISFQVGKEKFLIPWLLVINRKSTEVPMIDVHLRYSGSDLHGV 120

Query: 198 TAKVMDMPHI 208
           TAKV DMPHI
Sbjct: 121 TAKVADMPHI 130

[Close]

BLAST of Lsi03G022710 vs. TAIR 10
Match: AT3G51610.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 203.0 bits (515), Expect = 2.4e-52
Identity = 94/124 (75.81%), Postives = 108/124 (87.10%), Query Frame = 0


Query: 83  ILSLLVLLLSLVPISLAYRPGDIVPMSKMGQYHSSRTVWHDMIGRHCPIFGVNREVLVPI 142
           I +L+++ LS   +S AYRPGDIV MSKMGQYHSSRT WHD+IG+HCPIF VNREVL+PI
Sbjct: 17  IQALVLISLSFPFLSSAYRPGDIVRMSKMGQYHSSRTTWHDVIGKHCPIFAVNREVLIPI 76

Query: 143 PKPVGYTGADPYKISFQVGKEKFLVPWLLVINRKSAEVPMIDVHLRYSGSDLHGVTAKVM 202
            KP+GYTG DPYKI FQVG EKFL+ WLLVINRKS+EVPMIDV+LRYSG DL GVTA+V+
Sbjct: 77  AKPIGYTGTDPYKIKFQVGSEKFLIHWLLVINRKSSEVPMIDVNLRYSGGDLLGVTAQVI 136

Query: 203 DMPH 207
           DMPH
Sbjct: 137 DMPH 140

The following BLAST results are available for this feature:

BLAST of Lsi03G022710 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi03G022710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLX6	2.3e-66	96.15	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B5G0	2.3e-66	96.15	uncharacterized protein LOC103486235 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B641	2.3e-66	96.15	uncharacterized protein LOC103486235 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DXJ6	1.9e-65	93.85	uncharacterized protein LOC111024020 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DU34	1.9e-65	93.85	uncharacterized protein LOC111024020 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Lsi03G022710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903797.1	1.5e-67	97.69	uncharacterized protein LOC120090293 isoform X2 [Benincasa hispida]	[more]
XP_038903796.1	1.5e-67	97.69	uncharacterized protein LOC120090293 isoform X1 [Benincasa hispida]	[more]
XP_008442332.1	4.7e-66	96.15	PREDICTED: uncharacterized protein LOC103486235 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_008442331.1	4.7e-66	96.15	PREDICTED: uncharacterized protein LOC103486235 isoform X1 [Cucumis melo]	[more]
XP_022157272.1	4.0e-65	93.85	uncharacterized protein LOC111024020 isoform X2 [Momordica charantia]	[more]

BLAST of Lsi03G022710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51610.1	2.4e-52	75.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..59
None	No IPR available	PANTHER	PTHR36768	ATP-DEPENDENT HELICASE/DEOXYRIBONUCLEASE SUBUNIT B	coord: 83..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G022710.1	Lsi03G022710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane